> I have 9 fluorescent images which is taken from one tissue sample (immunostaining).
> They have little of bit of overlapping each other.
> Using this overlapped region, I want to align them and fuse them to make
> one big image (like completing jigsaw puzzles).
This problem is called image registration. There is the "Turboreg"
plugin, but that shows only the alligned overlap area. Also, in the
Biomedical Imaging in Java set of ImageJ plugins
(
http://bij.isi.uu.nl/) contains such plugins... However, I didn't
really test this kind of functionality of stitching images together
myself...
Kind regards,
Filip Rooms