2D stack

[Agnès Sauleda Brossa]

Hello,

I am working with images to reproduce a rectangular dish full of cells and I
wonder if there is a plug-in or a class to work with a stack that can move
not only in the horizontal direction but in the vertical too. That would
allow me to look at the images in a more comfortable way. If not, does
anybody know if it's possible to do it with a plug-in, or should a new class
or interface be developed?

Thanks,

Agnès.

[Agnès Sauleda Brossa]

Sorry, I think I haven't been clear with the explanation, I am not working
with depth, all my images are in the same focus plane. What I have is
approximately 200 images that reproduces a rectangular dish, i.e. 20x10
images and with the stack I have them one after the other and I can't
distinguish the change of row in my dish. It would be useful to have a stack
that can move the slices with a bar in the vertical direction of the screen
too.
I hope that this explanation it's a bit more clear.
Thanks again,

Agnès.

2006/3/20, Wayne Rasband <[hidden email]>:

>
> > I am working with images to reproduce a rectangular dish full of cells
> > and I
> > wonder if there is a plug-in or a class to work with a stack that can
> > move
> > not only in the horizontal direction but in the vertical too. That
> > would
> > allow me to look at the images in a more comfortable way. If not, does
> > anybody know if it's possible to do it with a plug-in, or should a new
> > class
> > or interface be developed?
>
> What do mean by "move in the vertical direction"? A stack has three
> dimensions, x, y and z. To move in the z dimension you use the "<" and
> ">" keys. With a zoomed stack, you can move in the x and y dimensions
> by holding down the shift key and dragging with the mouse.
>
> -wayne
>
>

[Michael Doube-2]

Something like this would be very useful for our large montages of SEM
images as the ability to flick between the montage rows and columns
would be handy.  It would need to have a dialog where the user could
input the number of images in each row and column, and the direction
that the capture went, relative to the image orientation (left to right,
top to bottom, or otherwise...).

Just to let you know there's some interest,

Mike

Agnès Sauleda Brossa wrote:

>Sorry, I think I haven't been clear with the explanation, I am not working
>with depth, all my images are in the same focus plane. What I have is
>approximately 200 images that reproduces a rectangular dish, i.e. 20x10
>images and with the stack I have them one after the other and I can't
>distinguish the change of row in my dish. It would be useful to have a stack
>that can move the slices with a bar in the vertical direction of the screen
>too.
>I hope that this explanation it's a bit more clear.
>Thanks again,
>
>Agnès.
>
>2006/3/20, Wayne Rasband <[hidden email]>:
>  
>
>>>I am working with images to reproduce a rectangular dish full of cells
>>>and I
>>>wonder if there is a plug-in or a class to work with a stack that can
>>>move
>>>not only in the horizontal direction but in the vertical too. That
>>>would
>>>allow me to look at the images in a more comfortable way. If not, does
>>>anybody know if it's possible to do it with a plug-in, or should a new
>>>class
>>>or interface be developed?
>>>      
>>>
>>What do mean by "move in the vertical direction"? A stack has three
>>dimensions, x, y and z. To move in the z dimension you use the "<" and
>>">" keys. With a zoomed stack, you can move in the x and y dimensions
>>by holding down the shift key and dragging with the mouse.
>>
>>-wayne
>>
>>
>>    
>>

--
Michael Doube  BPhil BVSc MRCVS
PhD Student
Dental Institute
Barts and The London School of Medicine and Dentistry
Queen Mary, University of London
New Rd
London  E1 1BB
United Kingdom

Phone [phone] ext 2681