3D co-localization

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3D co-localization

Cole, Richard W (HEALTH)
Dear imagers,

Is there a plugin that for co-localization in 3D or at least that will work w/a Z stack

Thanks

Rich


Richard Cole
Research Scientist V
Director: Advanced Light Microscopy & Image Analysis Core
Wadsworth Center
 
Research Assistant Professor
Dept. of Biomedical Sciences
School of Public Health State University of New York

P.O. Box 509 Albany N.Y. 12201-0509
518-474-7048 Phone
518-486-2693 Fax

Website www.wadsworth.org/cores/alm/index.htm

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Re: 3D co-localization

bnorthan
Hi Rich

Did you try the 'Coloc2' plugin that comes with Fiji??  It should support
3D images, the sample image they use is actually 3D.    It's a bit clunky,
you have to split the channels first to get it to run.

Brian



On Fri, Apr 10, 2015 at 3:33 PM, Cole, Richard (HEALTH) <
[hidden email]> wrote:

> Dear imagers,
>
> Is there a plugin that for co-localization in 3D or at least that will
> work w/a Z stack
>
> Thanks
>
> Rich
>
>
> Richard Cole
> Research Scientist V
> Director: Advanced Light Microscopy & Image Analysis Core
> Wadsworth Center
>
> Research Assistant Professor
> Dept. of Biomedical Sciences
> School of Public Health State University of New York
>
> P.O. Box 509 Albany N.Y. 12201-0509
> 518-474-7048 Phone
> 518-486-2693 Fax
>
> Website www.wadsworth.org/cores/alm/index.htm
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

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ImageJ mailing list: http://imagej.nih.gov/ij/list.html