Aquacosmos files

[ALEMBIC | Cesare]

Dear List,

does anyone know if is there a free software (or plugin) which can open
calcium imaging images .naf files, from Aquacosmos software (Hamamtsu)?

Best for all!

/Cesare


/

*/________________________________________________________
/**/Dr. Cesare Covino
/*Biologist - Light Microscopy Coordinator*/
/**ALEMBIC*
Advanced Light and Electron Microscopy BioImaging Center /
/DIBIT - /San Raffaele Scientific Institute//
/via Olgettina 58, 20132 - Milano - Italy /
/Tel [phone](others -4640, -4641)
Fax [phone]
e-mail: [hidden email]
ALEMBIC web page: www.sanraffaele.org/research/alembic
<http://www.sanraffaele.org/58226.html>


********************************************************************
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[Hanjun Guan]

Dear all:

I recorded a macro for processing my images and I am wondering whether it is possible to assign a shortcut (hotkey) for it.  I tried the submenu shortcuts under plugins to creat shortcut but it only allows me to select commands.   Or if someone could give me an instruction how to put the macro into the toolbar, that will work for me too.  Thanks a lot!

------------------
Hanjun Guan
2008-05-06

[Melissa Linkert]

Hi Cesare,
If you would be willing to send some sample files, we (LOCI) would be happy
to add support for this format to LOCI Bio-Formats (
http://loci.wisc.edu/ome/formats.html).  I will email you off-list with an
FTP server where you can send files.

Regards,
-Melissa

2008/5/6 Cesare -ALEMBIC- <[hidden email]>:

> Dear List,
>
> does anyone know if is there a free software (or plugin) which can open
> calcium imaging images .naf files, from Aquacosmos software (Hamamtsu)?
>
> Best for all!
>
> /Cesare
>
>
> /
>
> */________________________________________________________
> /**/Dr. Cesare Covino
> /*Biologist - Light Microscopy Coordinator*/
> /**ALEMBIC*
> Advanced Light and Electron Microscopy BioImaging Center /
> /DIBIT - /San Raffaele Scientific Institute//
> /via Olgettina 58, 20132 - Milano - Italy /
> /Tel [phone](others -4640, -4641)
> Fax [phone]
> e-mail: [hidden email]
> ALEMBIC web page: www.sanraffaele.org/research/alembic <
> http://www.sanraffaele.org/58226.html>
>
>
> ********************************************************************
> Sostieni la ricerca del San Raffaele con il 5permille!
> E' SEMPLICE E NON COSTA NULLA.
> Basta indicare nell'apposito riquadro della dichiarazione dei
> redditi ("Finanziamento agli enti della ricerca sanitaria") il codice
> fiscale della Fondazione Centro S. Raffaele del Monte Tabor:
> 03 06 42 80 153 e ricordarsi di firmare.
> Se vuoi saperne di piu' scrivi a [hidden email] o vai sul sito
> www.5xmille.org
>

[seb-7]

Hanjun Guan wrote:
> Dear all:
>
> I recorded a macro for processing my images and I am wondering whether it is possible to assign a shortcut (hotkey)

Hello,

Yes you can assign a shortcut to a macro:

macro "HotKeyTest [F2]"
{
showMessage("very useful macro");
}

It should work, assuming F2 is not already registered or trapped by your
operating system.

full description is there:
http://rsb.info.nih.gov/ij/developer/macro/macros.html#shortcuts

regards,

sebastien

[Joachim Wesner]

Hi Hanjun,

you should be able to assign a shortcut! If you copy the macro to the
plugins folder and use a name that
includes "_", you should see your macro as a command under "Plugins" (you
will need to restart ImageJ
or "install" the macro for this) and can assign your shortcut!

Cheers


ImageJ Interest Group <[hidden email]> schrieb am 06.05.2008 17:27:31:

> Dear all:
>
> I recorded a macro for processing my images and I am wondering
> whether it is possible to assign a shortcut (hotkey) for it.  I
> tried the submenu shortcuts under plugins to creat shortcut but it
> only allows me to select commands.   Or if someone could give me an
> instruction how to put the macro into the toolbar, that will work
> for me too.  Thanks a lot!
>
> ------------------
> Hanjun Guan
> 2008-05-06

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[Michael Schmid]

Hi Hanjun, Joachim,

it is even more simple, see the documentation
   http://rsb.info.nih.gov/ij/developer/macro/macros.html#shortcuts

e.g.

     macro "Macro 1 [a]" {
         print("The user pressed 'a'");
     }

Michael
________________________________________________________________

On 6 May 2008, at 18:00, Joachim Wesner wrote:

> Hi Hanjun,
>
> you should be able to assign a shortcut! If you copy the macro to the
> plugins folder and use a name that
> includes "_", you should see your macro as a command under  
> "Plugins" (you
> will need to restart ImageJ
> or "install" the macro for this) and can assign your shortcut!
>
> Cheers
>
>
> ImageJ Interest Group <[hidden email]> schrieb am 06.05.2008  
> 17:27:31:
>
>> Dear all:
>>
>> I recorded a macro for processing my images and I am wondering
>> whether it is possible to assign a shortcut (hotkey) for it.  I
>> tried the submenu shortcuts under plugins to creat shortcut but it
>> only allows me to select commands.   Or if someone could give me an
>> instruction how to put the macro into the toolbar, that will work
>> for me too.  Thanks a lot!
>>
>> ------------------
>> Hanjun Guan
>> 2008-05-06
>
>
> ______________________________________________________________________
> This email has been scanned by the MessageLabs Email Security System.
> For more information please visit http://www.messagelabs.com/email
> ______________________________________________________________________