Cell lineage tracing and tree

[Bertrand Vernay]

Dear all

I'm looking for a plugin to trace cell lineages and build the relevant tree. We are looking at mouse cells in culture over time (XYT stack) and we would like to follow (manually will be fine)  the lineage within a cell colony.

Thanks for your help

Bertrand

--
Dr Bertrand Vernay
Microscopy Senior Research Associate
Developmental Biology Unit
UCL Institute of Child Health
30 Guilford Street
London WC1N 1EH, UK
 
Tel :  (+44)  020 7905 2224 (direct line)
       (+44)  020 7242 9789 (ICH switchboard)
 
Fax:    (+44)  020 7831 4366
 
E-mail: [hidden email]
 
http://www.ich.ucl.ac.uk/services_and_facilities/lab_services/confocal_microscopy_core_facility/index.html
 

[Johan Henriksson-2]

Bertrand Vernay wrote:
> Dear all
>
> I'm looking for a plugin to trace cell lineages and build the relevant tree. We are looking at mouse cells in culture over time (XYT stack) and we would like to follow (manually will be fine)  the lineage within a cell colony.
>
> Thanks for your help
>
> Bertrand
>
>  
*the* software you are looking for is not a plugin:

www.endrov.net

it was originally made exactly for lineaging. contact me off-list if you
need support

/Johan

[Bertrand Vernay]

Thank you Johan. It is all what I need.

Bertrand

--
Dr Bertrand Vernay
Microscopy Senior Research Associate
Developmental Biology Unit
UCL Institute of Child Health
30 Guilford Street
London WC1N 1EH, UK

Tel :  (+44)  020 7905 2224 (direct line)
       (+44)  020 7242 9789 (ICH switchboard)

Fax:    (+44)  020 7831 4366

E-mail: [hidden email]

http://www.ich.ucl.ac.uk/services_and_facilities/lab_services/confocal_micro
scopy_core_facility/index.html
-----Original Message-----
From: ImageJ Interest Group [mailto:[hidden email]] On Behalf Of Johan
Henriksson
Sent: 20 June 2010 08:51
To: [hidden email]
Subject: Re: Cell lineage tracing and tree

Bertrand Vernay wrote:
> Dear all
>
> I'm looking for a plugin to trace cell lineages and build the relevant
tree. We are looking at mouse cells in culture over time (XYT stack) and we
would like to follow (manually will be fine)  the lineage within a cell
colony.
>
> Thanks for your help
>
> Bertrand
>
>  
*the* software you are looking for is not a plugin:

www.endrov.net

it was originally made exactly for lineaging. contact me off-list if you
need support

/Johan