Dear All,
I'm a new ImageJ user. I'm working on CT dataset, both from medical scanners (DICOM) and from industrial scanner (in Volume Graphics proprietary format: .vgl). When converting .vgl to DICOM, I have an image sequence that I can import as Image Sequence or Bio-formats in FIJI (up-to-date, WIN 10) the latest with a flag in "Group files with similar names". Then I can execute the 3D volume viewer. Then I would like to generate a DICOMDIR file that help a DICOM viewer to interpret all my .dcm files as a single serie. Tudor is not working with my Fiji version: (Fiji Is Just) ImageJ 2.0.0-rc-54/1.51h; Java 1.8.0_66 [64-bit]; Windows 10 10.0; 1437MB of 98195MB (1%) java.lang.NoClassDefFoundError: lu/tudor/santec/dicom/anonymizer/SimpleAnonPanel at java.lang.Class.getDeclaredConstructors0(Native Method) at java.lang.Class.privateGetDeclaredConstructors(Class.java:2671) at java.lang.Class.getConstructor0(Class.java:3075) at java.lang.Class.newInstance(Class.java:412) at ij.IJ.runUserPlugIn(IJ.java:215) at ij.IJ.runPlugIn(IJ.java:181) at ij.Executer.runCommand(Executer.java:137) at ij.Executer.run(Executer.java:66) at java.lang.Thread.run(Thread.java:745) Caused by: java.lang.ClassNotFoundException: lu.tudor.santec.dicom.anonymizer.SimpleAnonPanel at java.net.URLClassLoader.findClass(URLClassLoader.java:381) at java.lang.ClassLoader.loadClass(ClassLoader.java:424) at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:331) at java.lang.ClassLoader.loadClass(ClassLoader.java:357) ... 9 more Thanks to all!! ImageJ seems to be a promising application! -- An example of the DICOM header generated by VGStudioMAx: BitsPerPixel 16 DimensionOrder XYCZT IsInterleaved false IsRGB false LittleEndian true PixelType uint16 Series 0 Name Series 0 SizeC 1 SizeT 1 SizeX 648 SizeY 306 SizeZ 1714 0002,0002 Media Storage SOP Class UID #1 1.2.840.10008.5.1.4.1.1.2 0002,0003 Media Storage SOP Instance UID #1 2.25.939231546697130062711189260633828571005 0002,0010 Transfer Syntax UID #1 1.2.840.10008.1.2.1 0002,0012 Implementation Class UID #1 1.2.276.0.7230010.3.0.3.5.4 0002,0013 Implementation Version Name #1 OFFIS_DCMTK_354 0008,0016 SOP Class UID #1 1.2.840.10008.5.1.4.1.1.2 0008,0018 SOP Instance UID #1 2.25.939231546697130062711189260633828571005 0010,0010 Patient's Name #1 Volume 1 0010,0020 Patient ID #1 volume 0020,000d Study Instance UID #1 2.25.1669579281968996690913143969303353717994 0020,000e Series Instance UID #1 2.25.959810748906388118909445991464943427463 0020,0011 Series Number #1 1 0020,0012 Acquisition Number #1 1 0020,0032 Image Position (Patient) #1 0.500000\0.500000\0.521000 0020,0037 Image Orientation (Patient) #1 1.000000\0.000000\0.000000\0.000000\1.000000\0.000000 0028,0002 Samples per pixel #1 1 0028,0004 Photometric Interpretation #1 MONOCHROME2 0028,0010 Rows #1 306 0028,0011 Columns #1 648 0028,0030 Pixel Spacing #1 0.042000\0.042000 0028,0100 Bits Allocated #1 16 0028,0101 Bits Stored #1 16 0028,0102 High Bit #1 15 0028,0103 Pixel Representation #1 0 0028,1052 Rescale Intercept #1 0.000000 0028,1053 Rescale Slope #1 1.000000 Header information |
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