Hi all,
Today, I was running a macro
(
https://gist.github.com/lacan/05a8f7ab507560e51a1c ) on a set of
images to calculate intensity of yellow colour
(
https://www.dropbox.com/sh/l0p0qb4h3fq2emx/AAAHIelRJI7gk2udVE5-WLJFa?dl=0)
and I noticed something weird happening. I observed discrepancies in
the final results obtained from manual analysis and macro.
When I run the macro on the image ed_10-1-1.jpg, I get a raw
integrated density of 218334383.00000 but when I do the same analysis
manually (duplicate -> apply threshold -> restore selection in the
original -> measure integrated density) I get a density of 96516272. I
imagine something is going amok in the step where I create a
selection. I tried to check this by commenting out close statements in
the macro to be able to look at the progress at each stage, but that
failed. Could anyone help me out here?
Cheers,
Ram
--
ImageJ mailing list:
http://imagej.nih.gov/ij/list.html
Locked
