Hi all,
I have the task below to run using the Color Pixel Counter Plugin (after opening my image): run("RGB Color"); run("Color Pixel Counter", "color=Red cells=20 pixels=0.2100 minimum=255 display_0 display_1"); run("Color Pixel Counter", "color=Green cells=20 pixels=0.2100 minimum=255 display_0 display_1"); run("Color Pixel Counter", "color=Blue cells=20 pixels=0.2100 minimum=255 display_0 display_1"); However, I have been struggling in displaying the name of my original file in the first column of the Results Table (what I guess would be the place for my "labels"): Color Color Pixels Total Pixels Particles % Color 1 Red 1173093 1228800 5586157 95 2 Green 48230 1228800 229667 4 3 Blue 7477 1228800 35605 1 Instead of the output displaying 1, 2 and 3, I would like it to display the name of my file. Could I apply the method for batch processing? Any assistance would be very welcome. Kind regards, Mariana -- Sent from: http://imagej.1557.x6.nabble.com/ -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html
Mariana Niederheitmann
Visiting Scholar - Dept. of Horticulture and Crop Science - OARDC/The Ohio State University PhD Candidate - Plant Breeding and Genetics - University of São Paulo (ESALQ-USP) MSc - Plant Breeding and Genetics - Federal University of Lavras (UFLA) Agronomist - Federal University of Paraná (UFPR) +55 (19) 99848-7098 Skype: mariana.nieder |
Good day Mariana,
if you don't mind running a one-liner macro every time you've used the Color Pixel Counter Plugin ... Here it is: setResult("Label",nResults-1,getTitle()+"_"+getResultLabel(nResults-1)); Paste the above macro code line to an empty macro window (Plugins >> New >> Macro). Regards Herbie ::::::::::::::::::::::::::::::::::::: Am 12.12.18 um 17:53 schrieb mariana: > Hi all, > > I have the task below to run using the Color Pixel Counter Plugin (after > opening my image): > > run("RGB Color"); > run("Color Pixel Counter", "color=Red cells=20 pixels=0.2100 minimum=255 > display_0 display_1"); > run("Color Pixel Counter", "color=Green cells=20 pixels=0.2100 minimum=255 > display_0 display_1"); > run("Color Pixel Counter", "color=Blue cells=20 pixels=0.2100 minimum=255 > display_0 display_1"); > > However, I have been struggling in displaying the name of my original file > in the first column of the Results Table (what I guess would be the place > for my "labels"): > Color Color Pixels Total Pixels Particles % Color > 1 Red 1173093 1228800 5586157 95 > 2 Green 48230 1228800 229667 4 > 3 Blue 7477 1228800 35605 1 > > Instead of the output displaying 1, 2 and 3, I would like it to display the > name of my file. Could I apply the method for batch processing? > > Any assistance would be very welcome. > > Kind regards, > Mariana > > > > -- > Sent from: http://imagej.1557.x6.nabble.com/ > > -- > ImageJ mailing list: http://imagej.nih.gov/ij/list.html > -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html |
Great, Herbie! Thank you so much! You helped me a lot!
For Batch Processing, I just used the following macro in Process >> Batch >> Macro (since I am analyzing three colors in my pictures): run("RGB Color"); run("Color Pixel Counter", "color=Red cells=20 pixels=0.2100 minimum=255 display_0 display_1"); run("Color Pixel Counter", "color=Green cells=20 pixels=0.2100 minimum=255 display_0 display_1"); run("Color Pixel Counter", "color=Blue cells=20 pixels=0.2100 minimum=255 display_0 display_1"); setResult("Label",nResults-1,getTitle()+"_"+getResultLabel(nResults-1)); setResult("Label",nResults-2,getTitle()+"_"+getResultLabel(nResults-2)); setResult("Label",nResults-3,getTitle()+"_"+getResultLabel(nResults-3)); Kind regards, Mariana ----- Mariana Niederheitmann Visiting Scholar - Dept. of Horticulture and Crop Science - OARDC/The Ohio State University PhD Candidate - Plant Breeding and Genetics - University of São Paulo (ESALQ-USP) MSc - Plant Breeding and Genetics - Federal University of Lavras (UFLA) Agronomist - Federal University of Paraná (UFPR) +55 (19) 99848-7098 Skype: mariana.nieder -- Sent from: http://imagej.1557.x6.nabble.com/ -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html
Mariana Niederheitmann
Visiting Scholar - Dept. of Horticulture and Crop Science - OARDC/The Ohio State University PhD Candidate - Plant Breeding and Genetics - University of São Paulo (ESALQ-USP) MSc - Plant Breeding and Genetics - Federal University of Lavras (UFLA) Agronomist - Federal University of Paraná (UFPR) +55 (19) 99848-7098 Skype: mariana.nieder |
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