Fiber counting

[Fidan]

CONTENTS DELETED

The author has deleted this message.

[Herbie-3]

Fidan.

interesting image, indeed.

Are you able to count whatever you call fibers manually?
If not, then there is little chance that a machine can do it...

I'm also unable to see a marked surface.

Best

Herbie

:::::::::::::::::::::::::::::::
On 17.04.14 22:16, Fidan wrote:

> Hi,
>
> I am a beginner in Fiji/ imagej and I have a biological project in which i
> have  to calculate the number of fibers, the
> <http://imagej.1557.x6.nabble.com/file/n5007343/Fiber.jpg> density and the
> marked surface in this kind of image ( joint). Could you help me please?
>
> Best regards,
>
> Fidan
>
>
>
> --
> View this message in context: http://imagej.1557.x6.nabble.com/Fiber-counting-tp5007343.html
> Sent from the ImageJ mailing list archive at Nabble.com.
>
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> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
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[dscho]

Hi Fidan,

On Thu, 17 Apr 2014, Fidan wrote:

> I am a beginner in Fiji/ imagej and I have a biological project in which i
> have  to calculate the number of fibers, the
> <http://imagej.1557.x6.nabble.com/file/n5007343/Fiber.jpg> density and the
> marked surface in this kind of image ( joint). Could you help me please?

Why did you delete your post? It would be nicer for the community to leave
a record what your question was, and how it was solved. This way (with a
deleted post, and a deleted image), nobody can learn from Herbie's expert
answer, and nobody else can help you anymore, either.

Ciao,
Johannes

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[rthomas986]

I agree, I am interested in fiber counting and am quite interested to follow the chain of responses...

Fidan's image was deleted before I saw it but I have been trying to threshold images to distinguish between the background and the foreground. However if there are 2 genres of items in the foreground ( fibers and cells, for example) then I'm having trouble identifying what is only fiber.

Richelle

-----Original Message-----
From: ImageJ Interest Group [mailto:[hidden email]] On Behalf Of Johannes Schindelin
Sent: Friday, April 18, 2014 1:11 PM
To: [hidden email]
Subject: Re: Fiber counting

Hi Fidan,

On Thu, 17 Apr 2014, Fidan wrote:

> I am a beginner in Fiji/ imagej and I have a biological project in
> which i have  to calculate the number of fibers, the
> <http://imagej.1557.x6.nabble.com/file/n5007343/Fiber.jpg> density and
> the marked surface in this kind of image ( joint). Could you help me please?

Why did you delete your post? It would be nicer for the community to leave a record what your question was, and how it was solved. This way (with a deleted post, and a deleted image), nobody can learn from Herbie's expert answer, and nobody else can help you anymore, either.

Ciao,
Johannes

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