Grid collecion stitching - filenames

[Heerpa]

Hi,

 

I am currently using the very powerful stitching plugin to stitch tile
scans. The filenames of the single tiles are something the sort of
tile_0000, tile_0100, tile_0001, tile_0101 for a 2x2 tile scan. In the
plugin, there is the option to use position-defined file names, and I tried
this with tile_{ii}{jj} - but that does not seem to be the right notation.
Now, I am manually renaming the files into a linear order and use the
row-by-row option.

Has anybody used the position defined option and could tell me how to use
it?

 

Thanks in advance

   Heinrich


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[Heerpa]

I noticed I could have a look at the code and found out the convention is
just {xx}{yy}.
Open-source is really a good thing :-)

sorry about this, cheers
    Heinrich

> -----Ursprüngliche Nachricht-----
> Von: ImageJ Interest Group [mailto:[hidden email]] Im Auftrag von
> Heinrich Grabmayr
> Gesendet: Donnerstag, 13. Juni 2013 08:41
> An: [hidden email]
> Betreff: Grid collecion stitching - filenames
>
> Hi,
>
>
>
> I am currently using the very powerful stitching plugin to stitch tile

scans. The
> filenames of the single tiles are something the sort of tile_0000,
tile_0100,
> tile_0001, tile_0101 for a 2x2 tile scan. In the plugin, there is the
option to use
> position-defined file names, and I tried this with tile_{ii}{jj} - but
that does

> not seem to be the right notation.
> Now, I am manually renaming the files into a linear order and use the row-
> by-row option.
>
> Has anybody used the position defined option and could tell me how to use
> it?
>
>
>
> Thanks in advance
>
>    Heinrich
>
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html

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ImageJ mailing list: http://imagej.nih.gov/ij/list.html

[Stephan Preibisch]

Hi Heinrich,

I just saw that my documentation does not cover it, I just changed that: http://fiji.sc/Image_Stitching#Grid.2FCollection_Stitching

Thanks for pointing it out.

Bye bye,
Stephan

On Jun 13, 2013, at 3:01 , Heinrich Grabmayr wrote:

> I noticed I could have a look at the code and found out the convention is
> just {xx}{yy}.
> Open-source is really a good thing :-)
>
> sorry about this, cheers
>    Heinrich
>
>
>> -----Ursprüngliche Nachricht-----
>> Von: ImageJ Interest Group [mailto:[hidden email]] Im Auftrag von
>> Heinrich Grabmayr
>> Gesendet: Donnerstag, 13. Juni 2013 08:41
>> An: [hidden email]
>> Betreff: Grid collecion stitching - filenames
>>
>> Hi,
>>
>>
>>
>> I am currently using the very powerful stitching plugin to stitch tile
> scans. The
>> filenames of the single tiles are something the sort of tile_0000,
> tile_0100,
>> tile_0001, tile_0101 for a 2x2 tile scan. In the plugin, there is the
> option to use
>> position-defined file names, and I tried this with tile_{ii}{jj} - but
> that does
>> not seem to be the right notation.
>> Now, I am manually renaming the files into a linear order and use the row-
>> by-row option.
>>
>> Has anybody used the position defined option and could tell me how to use
>> it?
>>
>>
>>
>> Thanks in advance
>>
>>   Heinrich
>>
>>
>> --
>> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html

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ImageJ mailing list: http://imagej.nih.gov/ij/list.html