Hough transform problem Edge detection
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Hough transform problem Edge detection
 
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Hello all,
I have to detect edges and measure distances between them, so I have proceed as follows : 1- convert the image to 8 bits image, crop the image 2- run a median filter 3- run the canny edge detector 4- enhance the contrast but I didn't find any plugin on internet to perform the Hough transform to detect edges, but a found a java source with a complied jar file to show how it work I used thir executable jar file to detect edges of my processed image and it worked. So i'am trying to impliment this java source code into my imageJ plugin filter but I didn't succeed. Does anybody has a ready plugin to perform Hough transform for edge detection or can anone help me to impliment my java code source into imagej I would be thankful. Cheers -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html |
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Nizar,
if you had had look at the ImageJ-plugin site <http://rsb.info.nih.gov/ij/plugins/index.html> you could have found the link <http://imagingbook.com/source/> to the fabulous ImageJ-plugin collection of Wilhelm Burger and Mark Burge that contains, as indicated, an ImageJ-plugin called "Hough Linear Transform". HTH Herbie ::::::::::::::::::::::::::::::::::::::: On 05.12.14 16:01, Nizar SGHAIER wrote: > Hello all, > I have to detect edges and measure distances between them, so I have proceed as follows : > 1- convert the image to 8 bits image, crop the image > 2- run a median filter > 3- run the canny edge detector > 4- enhance the contrast > > but I didn't find any plugin on internet to perform the Hough transform to detect edges, but a found a java source with a complied jar file to show how it work I used thir executable jar file to detect edges of my processed image and it worked. > So i'am trying to impliment this java source code into my imageJ plugin filter but I didn't succeed. > > Does anybody has a ready plugin to perform Hough transform for edge detection or can anone help me to impliment my java code source into imagej I would be thankful. > > Cheers > > -- > ImageJ mailing list: http://imagej.nih.gov/ij/list.html > -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html |
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Hi Nizar,
> Does anybody has a ready plugin to perform Hough transform A web search for "imagej hough" yields at least two plugins: * http://imagej.net/plugins/hough-circles.html * http://imagej.net/plugins/ght/index.html And a StackOverflow question: * http://stackoverflow.com/q/9055436 And even a YouTube video! * https://www.youtube.com/watch?v=zZ8ltANfUJw Popular technique. ;-) Regards, Curtis On Fri, Dec 5, 2014 at 12:39 PM, Herbie <[hidden email]> wrote: > Nizar, > > if you had had look at the ImageJ-plugin site > > <http://rsb.info.nih.gov/ij/plugins/index.html> > > you could have found the link > > <http://imagingbook.com/source/> > > to the fabulous ImageJ-plugin collection of Wilhelm Burger and Mark Burge > that contains, as indicated, an ImageJ-plugin called "Hough Linear > Transform". > > HTH > > Herbie > > ::::::::::::::::::::::::::::::::::::::: > > On 05.12.14 16:01, Nizar SGHAIER wrote: > >> Hello all, >> I have to detect edges and measure distances between them, so I have >> proceed as follows : >> 1- convert the image to 8 bits image, crop the image >> 2- run a median filter >> 3- run the canny edge detector >> 4- enhance the contrast >> >> but I didn't find any plugin on internet to perform the Hough transform >> to detect edges, but a found a java source with a complied jar file to show >> how it work I used thir executable jar file to detect edges of my processed >> image and it worked. >> So i'am trying to impliment this java source code into my imageJ plugin >> filter but I didn't succeed. >> >> Does anybody has a ready plugin to perform Hough transform for edge >> detection or can anone help me to impliment my java code source into imagej >> I would be thankful. >> >> Cheers >> >> -- >> ImageJ mailing list: http://imagej.nih.gov/ij/list.html >> >> > -- > ImageJ mailing list: http://imagej.nih.gov/ij/list.html > -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html |
Re: Hough transform problem Edge detection
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In reply to this post by Herbie-4
Hello Herbie and Nizar,
thanks for mentioning our "fabulous" collection. Incidentially there was a recent update to the HT code that is not part of the online version yet. I am placing a copy of this new version here for the moment: https://www.dropbox.com/sh/2tycaz5hr0nlu64/AABLym1jZV09XX2HYZJSYecta?dl=0 It contains the libary code and a demo plugin showing its use. Good luck! --Wilhelm www.imagingbook.com ________________________________________ From: ImageJ Interest Group [[hidden email]] On Behalf Of Herbie [[hidden email]] Sent: Friday, December 05, 2014 19:39 To: [hidden email] Subject: Re: Hough transform problem Edge detection Nizar, if you had had look at the ImageJ-plugin site <http://rsb.info.nih.gov/ij/plugins/index.html> you could have found the link <http://imagingbook.com/source/> to the fabulous ImageJ-plugin collection of Wilhelm Burger and Mark Burge that contains, as indicated, an ImageJ-plugin called "Hough Linear Transform". HTH Herbie ::::::::::::::::::::::::::::::::::::::: On 05.12.14 16:01, Nizar SGHAIER wrote: > Hello all, > I have to detect edges and measure distances between them, so I have proceed as follows : > 1- convert the image to 8 bits image, crop the image > 2- run a median filter > 3- run the canny edge detector > 4- enhance the contrast > > but I didn't find any plugin on internet to perform the Hough transform to detect edges, but a found a java source with a complied jar file to show how it work I used thir executable jar file to detect edges of my processed image and it worked. > So i'am trying to impliment this java source code into my imageJ plugin filter but I didn't succeed. > > Does anybody has a ready plugin to perform Hough transform for edge detection or can anone help me to impliment my java code source into imagej I would be thankful. > > Cheers > > -- > ImageJ mailing list: http://imagej.nih.gov/ij/list.html > -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html |
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Hi Wilhelm,
> thanks for mentioning our "fabulous" collection Have you considered making an ImageJ update site? http://imagej.net/Update_Sites It would make installation easier for users. Regards, Curtis On Fri, Dec 5, 2014 at 3:13 PM, Burger Wilhelm < [hidden email]> wrote: > Hello Herbie and Nizar, > > thanks for mentioning our "fabulous" collection. Incidentially there was a > recent update to the HT code that is not part of the online version yet. I > am placing a copy of this new version here for the moment: > > https://www.dropbox.com/sh/2tycaz5hr0nlu64/AABLym1jZV09XX2HYZJSYecta?dl=0 > > It contains the libary code and a demo plugin showing its use. > > Good luck! > --Wilhelm > > www.imagingbook.com > > > ________________________________________ > From: ImageJ Interest Group [[hidden email]] On Behalf Of Herbie [ > [hidden email]] > Sent: Friday, December 05, 2014 19:39 > To: [hidden email] > Subject: Re: Hough transform problem Edge detection > > Nizar, > > if you had had look at the ImageJ-plugin site > > <http://rsb.info.nih.gov/ij/plugins/index.html> > > you could have found the link > > <http://imagingbook.com/source/> > > to the fabulous ImageJ-plugin collection of Wilhelm Burger and Mark > Burge that contains, as indicated, an ImageJ-plugin called "Hough Linear > Transform". > > HTH > > Herbie > > ::::::::::::::::::::::::::::::::::::::: > On 05.12.14 16:01, Nizar SGHAIER wrote: > > Hello all, > > I have to detect edges and measure distances between them, so I have > proceed as follows : > > 1- convert the image to 8 bits image, crop the image > > 2- run a median filter > > 3- run the canny edge detector > > 4- enhance the contrast > > > > but I didn't find any plugin on internet to perform the Hough transform > to detect edges, but a found a java source with a complied jar file to show > how it work I used thir executable jar file to detect edges of my processed > image and it worked. > > So i'am trying to impliment this java source code into my imageJ plugin > filter but I didn't succeed. > > > > Does anybody has a ready plugin to perform Hough transform for edge > detection or can anone help me to impliment my java code source into imagej > I would be thankful. > > > > Cheers > > > > -- > > ImageJ mailing list: http://imagej.nih.gov/ij/list.html > > > > -- > ImageJ mailing list: http://imagej.nih.gov/ij/list.html > -- > ImageJ mailing list: http://imagej.nih.gov/ij/list.html > -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html |
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Hi Wilhelm,
> I have not used the Updater so far - is it also available in vanilla > ImageJ or do I need to run Fiji? It is part of core ImageJ2, which can be downloaded from: http://imagej.net/Downloads The Fiji update site is optional. At the moment, the download is for an "unstable development" version of IJ2, but there will soon be a stable download of ImageJ2 available, which will be the preferred package to download, unless you want the Fiji plugins too. > Is there any support for SVN? You can use whatever SCM and build system you like, or none at all. The Updater is a mechanism for distribution, not for building or tracking source code. That said, the core projects prefer Maven and Git, so if you look at http://imagej.net/Development you'll see a lot more documentation on using those. But using SVN is just fine if that is what you like! See also http://imagej.net/Updater Regards, Curtis On Fri, Dec 5, 2014 at 3:46 PM, Burger Wilhelm < [hidden email]> wrote: > Hello Curtis, > > yes I did. Our source code is currently undergoing major restructuring and > migration. I have not used the Updater so far - is it also available in > vanilla ImageJ or do I need to run Fiji? Is there any support for SVN? > > Thanks much, > Wilhelm > > ________________________________________ > From: ImageJ Interest Group [[hidden email]] On Behalf Of Curtis > Rueden [[hidden email]] > Sent: Friday, December 05, 2014 22:17 > To: [hidden email] > Subject: Re: Hough transform problem Edge detection > > Hi Wilhelm, > > > thanks for mentioning our "fabulous" collection > > Have you considered making an ImageJ update site? > http://imagej.net/Update_Sites > > It would make installation easier for users. > > Regards, > Curtis > > On Fri, Dec 5, 2014 at 3:13 PM, Burger Wilhelm < > [hidden email]> wrote: > > > Hello Herbie and Nizar, > > > > thanks for mentioning our "fabulous" collection. Incidentially there was > a > > recent update to the HT code that is not part of the online version yet. > I > > am placing a copy of this new version here for the moment: > > > > > https://www.dropbox.com/sh/2tycaz5hr0nlu64/AABLym1jZV09XX2HYZJSYecta?dl=0 > > > > It contains the libary code and a demo plugin showing its use. > > > > Good luck! > > --Wilhelm > > > > www.imagingbook.com > > > > > > ________________________________________ > > From: ImageJ Interest Group [[hidden email]] On Behalf Of Herbie [ > > [hidden email]] > > Sent: Friday, December 05, 2014 19:39 > > To: [hidden email] > > Subject: Re: Hough transform problem Edge detection > > > > Nizar, > > > > if you had had look at the ImageJ-plugin site > > > > <http://rsb.info.nih.gov/ij/plugins/index.html> > > > > you could have found the link > > > > <http://imagingbook.com/source/> > > > > to the fabulous ImageJ-plugin collection of Wilhelm Burger and Mark > > Burge that contains, as indicated, an ImageJ-plugin called "Hough Linear > > Transform". > > > > HTH > > > > Herbie > > > > ::::::::::::::::::::::::::::::::::::::: > > On 05.12.14 16:01, Nizar SGHAIER wrote: > > > Hello all, > > > I have to detect edges and measure distances between them, so I have > > proceed as follows : > > > 1- convert the image to 8 bits image, crop the image > > > 2- run a median filter > > > 3- run the canny edge detector > > > 4- enhance the contrast > > > > > > but I didn't find any plugin on internet to perform the Hough transform > > to detect edges, but a found a java source with a complied jar file to > show > > how it work I used thir executable jar file to detect edges of my > processed > > image and it worked. > > > So i'am trying to impliment this java source code into my imageJ plugin > > filter but I didn't succeed. > > > > > > Does anybody has a ready plugin to perform Hough transform for edge > > detection or can anone help me to impliment my java code source into > imagej > > I would be thankful. > > > > > > Cheers > > > > > > -- > > > ImageJ mailing list: http://imagej.nih.gov/ij/list.html > > > > > > > -- > > ImageJ mailing list: http://imagej.nih.gov/ij/list.html > > -- > > ImageJ mailing list: http://imagej.nih.gov/ij/list.html > > > > -- > ImageJ mailing list: http://imagej.nih.gov/ij/list.html > -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html |
Re: Hough transform problem Edge detection
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In reply to this post by Nizar SGHAIER
Good afternoon,
thank you all for your replies, so I am trying to detect edges and not circles, and I have used the Burger Hough Linear transform and I did not found the disired result, I am attaching some pictures to this e-mail to explain more what I am looking for. Big thanks To you Wilhelm for the plugin posted on your dropbox, I will test it today and tell you if it returns the desired results. I am attaching images and the found java source code that gave me the disired results. PS : the firth link contains the java source code you can put the two files together in the same directory and compile and run using ImageJ to get it work. The fifth link conatins the obtained results using the java source code. thank you all cheers -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html |
Re: Hough transform problem Edge detection
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In reply to this post by Nizar SGHAIER
Good morning all,
so I have tried several times with the new plugin provided by Wilhelm Burger and Mark Burge for Hough linear transform, and it couldn't detect main edges, so please can anyone embeed the java code that I provided into a plugin in imageJ, because my knowledges are so limited in java language. I would be thankful cheers -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html |
Re: Hough transform problem Edge detection
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Hello Nizar,
it is hard to tell what is going wrong with this little information. From what I see in the Java source you placed at https://drive.google.com/file/d/0By2gw_6S-O9tbGZPbzJ6VlV0WEU/view?pli=1 you are NOT using our code - this is some other implementation! --Wilhelm www.imagingbook.com > -----Original Message----- > From: ImageJ Interest Group [mailto:[hidden email]] On Behalf Of > Nizar SGHAIER > Sent: Wednesday, December 10, 2014 8:57 AM > To: [hidden email] > Subject: Re: Hough transform problem Edge detection > > Good morning all, > > so I have tried several times with the new plugin provided by Wilhelm Burger > and Mark Burge for Hough linear transform, and it couldn't detect main > edges, so please can anyone embeed the java code that I provided into a > plugin in imageJ, because my knowledges are so limited in java language. > I would be thankful > > cheers > > -- > ImageJ mailing list: http://imagej.nih.gov/ij/list.html -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html |
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