How to apply straighten to a stack, cannot find the "stack " button in straighten window

[jennifer niu]

Hi, all

I used the Eva Kocsis' original plugin to straighten a curved object, but I cannot straighten a whole stack.
I followed the steps from the instruction of the website, but still couldnot find the "stack" in the straighten window.

First import>image sequence from a time-lapse images, it automatically formed a stack
then use plugins>straighten, after select the nodes with the crosshair in the first image, there is no "stack" button on the panel. click the straighten button, a straightened filament window appeared, still cannot find the "stack" button.

How can I apply the first straighten to a whole series?

The instructions as follow: Stacks:

If a stack is read in, the first image of the stack will appear in the "Straighten" window. The filament has to be unbent as usual. When the final set of nodes have been selected, the program automatically fits the same set of nodes to each image in the stack by clicking on the button of "Stack" in the "Straighten" window, and a stack of straightened filaments will be created. Please note that this button doesn't appear in the window if only one image is read in, i.e. there is no stack present.  

Where can I find the stack button? Thanks in advance

Jennifer

[Wayne Rasband]

The Edit>Selection>Straighten command in the 1.42b daily build works  
with stacks.

-wayne

On Nov 6, 2008, at 2:55 AM, jennifer niu wrote:

> Hi, all
>
> I used the Eva Kocsis' original plugin to straighten a curved object,  
> but I
> cannot straighten a whole stack.
> I followed the steps from the instruction of the website, but still  
> couldnot
> find the "stack" in the straighten window.
>
> First import>image sequence from a time-lapse images, it automatically
> formed a stack
> then use plugins>straighten, after select the nodes with the crosshair  
> in
> the first image, there is no "stack" button on the panel. click the
> straighten button, a straightened filament window appeared, still  
> cannot
> find the "stack" button.
>
> How can I apply the first straighten to a whole series?
>
> The instructions as follow: Stacks:
>
> If a stack is read in, the first image of the stack will appear in the
> "Straighten" window. The filament has to be unbent as usual. When the  
> final
> set of nodes have been selected, the program automatically fits the  
> same set
> of nodes to each image in the stack by clicking on the button of  
> "Stack" in
> the "Straighten" window, and a stack of straightened filaments will be
> created. Please note that this button doesn't appear in the window if  
> only
> one image is read in, i.e. there is no stack present.
>
> Where can I find the stack button? Thanks in advance
>
> Jennifer
>
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> http://n2.nabble.com/How-to-apply-straighten-to-a-stack%2C-cannot- 
> find-the-%22stack-%22-button-in-straighten-window-
> tp1463843p1463843.html
> Sent from the ImageJ mailing list archive at Nabble.com.
>

[jennifer niu]

Dear Wayne,

 

Thank you so much for help. It will be so great if image 1.42b can deal it. The problem is the latest version I can download is the 1.42a. Where can I get the 1.42b version, or could you kindly send me the image 1.42b? I really appreciate your generous assistance for sharing the imageJ.

 

Thanks

JIngwen

 

Niu Jing-wen 
Xu Zhi-Heng's Lab
Institute of Genetics and Developmental Biology(IGDB)
Chinese Academy of Sciences
Datun Road, Chaoyang District, 100101
Beijing, P.R. China.
Tel : [phone]
Fax : [phone]
Email: [hidden email]

[Joachim Wesner]

Hi Jennifer,

using the" Update ImageJ ...." menu entry, at the LOWER end there should be
an entry "daily build", there I just downloaded 1.42b

Joachim

Greeting to Beijing,  zhu ni zhoumo hao!


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Dear Wayne,
Thank you so much for help. It will be so great if image 1.42b can deal it.
The problem is the latest version I can download is the 1.42a. Where
can I get the 1.42b version, or could you kindly send me the image 1.42b? I
really appreciate your generous assistance for sharing the imageJ.
Thanks
JIngwen
Niu Jing-wen
Xu Zhi-Heng's Lab
Institute of Genetics and Developmental Biology(IGDB)
Chinese Academy of Sciences
Datun Road, Chaoyang District, 100101
Beijing, P.R. China.
Tel : [phone]
Fax : [phone]
Email: [hidden email]






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