How to use stacks to characterize the video camera used.

[John Clark]

I'm trying to use ImageJ to analyze movie sequences from a camera. What
I need is some idea, or if there is a plugin, which basically takes the
value of a pixel at a given location (or region depending...), and then
gives average and SD of that pixel's value across time (really
successive images in the stack.).

The question is, is there some tool in ImageJ, or plugin that does this
sort of analysis.

Thanks,
John Clark.

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ImageJ mailing list: http://imagej.nih.gov/ij/list.html

[Cammer, Michael]

Just do an Image > Stacks > Z Project...

===========================================================================
Michael Cammer, Microscopy Core & Dustin Lab , Skirball Institute, NYU Langone Medical Center
Cell:  914-309-3270   Lab: 212-263-3208
http://ocs.med.nyu.edu/microscopy & http://www.med.nyu.edu/skirball-lab/dustinlab/


-----Original Message-----
From: ImageJ Interest Group [mailto:[hidden email]] On Behalf Of John Clark
Sent: Wednesday, April 30, 2014 4:34 PM
To: [hidden email]
Subject: How to use stacks to characterize the video camera used.

I'm trying to use ImageJ to analyze movie sequences from a camera. What I need is some idea, or if there is a plugin, which basically takes the value of a pixel at a given location (or region depending...), and then gives average and SD of that pixel's value across time (really successive images in the stack.).

The question is, is there some tool in ImageJ, or plugin that does this sort of analysis.

Thanks,
John Clark.

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ImageJ mailing list: http://imagej.nih.gov/ij/list.html

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[John Clark]

Thanks to both respondents, I'll try that when I get things setup.

John Clark.


-----Original Message-----
From: Cammer, Michael <[hidden email]>
To: IMAGEJ <[hidden email]>
Sent: Wed, Apr 30, 2014 1:55 pm
Subject: Re: How to use stacks to characterize the video camera used.

Just do an Image > Stacks > Z Project...

=========================================================================
==
Michael Cammer, Microscopy Core & Dustin Lab , Skirball Institute, NYU
Langone Medical Center
Cell:  914-309-3270   Lab: 212-263-3208
http://ocs.med.nyu.edu/microscopy &
http://www.med.nyu.edu/skirball-lab/dustinlab/


-----Original Message-----
 From: ImageJ Interest Group [mailto:[hidden email]] On Behalf Of
John Clark
Sent: Wednesday, April 30, 2014 4:34 PM
To: [hidden email]
Subject: How to use stacks to characterize the video camera used.

I'm trying to use ImageJ to analyze movie sequences from a camera. What
I need is some idea, or if there is a plugin, which basically takes the
value of a pixel at a given location (or region depending...), and then
gives average and SD of that pixel's value across time (really
successive images in the stack.).

The question is, is there some tool in ImageJ, or plugin that does this
sort of analysis.

Thanks,
John Clark.

--
ImageJ mailing list: http://imagej.nih.gov/ij/list.html

------------------------------------------------------------
This email message, including any attachments, is for the sole use of
the intended recipient(s) and may contain information that is
proprietary, confidential, and exempt from disclosure under applicable
law. Any unauthorized review, use, disclosure, or distribution is
prohibited. If you have received this email in error please notify the
sender by return email and delete the original message. Please note,
the recipient should check this email and any attachments for the
presence of viruses. The organization accepts no liability for any
damage caused by any virus transmitted by this email.
=================================

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ImageJ mailing list: http://imagej.nih.gov/ij/list.html

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