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Image Stabilizer Error

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Jacob Keller-2
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Image Stabilizer Error

Jacob Keller-2
All of a sudden the image stabilizer plugin stopped working--any thoughts
why?

The quite verbose error msg is below.

All the best,

Jacob Keller



Image_Stabilizer not up-to-date because 1 source files are not up-to-date
(C:\Users\kellerj\AppData\Local\Temp\java7624359557564000693\src\main\java\Image_Stabilizer.java)
Compiling 1 file in
C:\Users\kellerj\AppData\Local\Temp\java7624359557564000693
[-classpath,
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kellerj\Desktop\Fiji.app\jars\mpicbg-1.1.1.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\mpicbg-trakem2-1.2.3.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\mpicbg_-1.1.1.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\mtj-1.0.4.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\multimask_statistics.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\nailgun-server-0.9.1.jar;C:\Users\kellerj\Desktop\Fiji.app\java\win64\jdk1.8.0_66\jre\lib\ext\nashorn.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\native-lib-loader-2.1.4.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\netcdf-4.3.19.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\netlib-java-0.9.3-renjin-patched-2.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\object-inspector-0.1.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\objenesis-2.1.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\bio-formats\ome-poi-5.2.4.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\bio-formats\ome-xml-5.2.4.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\op-finder-0.1.0.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\opencsv-2.4.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\options-1.1.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\pal-optimization-2.0.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\panorama_-3.0.1.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\pentaho-package-manager-1.0.8.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\perf4j-0.9.13.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\plexus-utils-1.5.6.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins;C:\Users\kellerj\Desktop\Fiji.app\jars\postgresql-8.2-507.jdbc3.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\regexp-1.3.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\register_virtual_stack_slices-3.0.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\registration_3d-2.0.0.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\renjin-appl-0.8.1906.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\renjin-core-0.8.1906.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\renjin-gnur-runtime-0.8.1906.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\renjin-script-engine-0.8.1906.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\rhino-1.7.6.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\rsyntaxtextarea-2.5.8.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scala-compiler-2.12.0-M4.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scala-library-2.12.0-M4.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scala-parser-combinators_2.12.0-M4-1.0.4.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scala-reflect-2.12.0-M4.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scala-xml_2.12.0-M4-1.0.5.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scifio-0.29.0.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scifio-bf-compat-2.0.0.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scifio-cli-0.3.2.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scifio-hdf5-0.1.1.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scifio-jai-imageio-1.1.0.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scifio-lifesci-0.7.0.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scifio-ome-xml-0.14.0.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scifio-tools-0.14.0.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scijava-common-2.60.1.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scijava-config-2.0.1.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scijava-expression-parser-3.1.0.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scijava-plugins-commands-0.2.2.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scijava-plugins-platforms-0.2.0.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scijava-plugins-text-markdown-0.1.2.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scijava-plugins-text-plain-0.1.2.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scijava-ui-awt-0.1.4.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scijava-ui-swing-0.9.0.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\script-editor-0.1.0.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scripting-beanshell-0.3.1.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scripting-clojure-0.1.4.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scripting-groovy-0.2.5.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scripting-java-0.4.0.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scripting-javascript-0.4.3.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scripting-jruby-0.2.4.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scripting-jython-0.3.1.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scripting-renjin-0.2.1.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\scripting-scala-0.1.0.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\slf4j-api-1.7.21.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\snakeyaml-1.13.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\bio-formats\specification-5.2.4.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\spim_data-2.2.0.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\stats-0.8.1906.jar;C:\Users\kellerj\Desktop\Fiji.app\java\win64\jdk1.8.0_66\jre\lib\ext\sunec.jar;C:\Users\kellerj\Desktop\Fiji.app\java\win64\jdk1.8.0_66\jre\lib\ext\sunjce_provider.jar;C:\Users\kellerj\Desktop\Fiji.app\java\win64\jdk1.8.0_66\jre\lib\ext\sunmscapi.jar;C:\Users\kellerj\Desktop\Fiji.app\java\win64\jdk1.8.0_66\jre\lib\ext\sunpkcs11.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\swing-checkbox-tree-1.0.1.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\swing-worker-1.1.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\swingx-1.6.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\trakem2_tps-1.1.2.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\trove4j-3.0.3.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\bio-formats\turbojpeg-5.2.4.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\udunits-4.3.18.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\ui-behaviour-1.1.0.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\utils-0.8.1906.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\vecmath-1.6.0-scijava-2.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\wavelets-2.0.0.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\weave_jy2java-2.0.0-SNAPSHOT.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\weka-dev-3.9.0.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\xerbla-0.8.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\xercesImpl-2.8.1.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\xml-apis-1.3.03.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\xml-apis-ext-1.3.04.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\xmlgraphics-commons-2.1.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\xmpcore-5.1.2.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\xuggle-xuggler-5.4.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\xz-1.0.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\yecht-1.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\z_spacing-0.0.1-SNAPSHOT.jar;C:\Users\kellerj\Desktop\Fiji.app\java\win64\jdk1.8.0_66\jre\lib\ext\zipfs.jar,
-d,
C:\Users\kellerj\AppData\Local\Temp\java7624359557564000693\target\classes,
C:\Users\kellerj\AppData\Local\Temp\java7624359557564000693\src\main\java\Image_Stabilizer.java]
using the class path:
C:\Users\kellerj\AppData\Local\Temp\java7624359557564000693\target\classes;C:\Users\kellerj\Desktop\Fiji.app\plugins\3D_Blob_Segmentation-3.0.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\3D_Objects_Counter-2.0.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\3D_Viewer-4.0.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Algorithm_Launcher.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\AnalyzeSkeleton_-3.1.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Anisotropic_Diffusion_2D-2.0.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Archipelago_Plugins-0.5.2.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Arrow_-2.0.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Auto_Threshold-1.16.4.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\BalloonSegmentation_-2.0.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\BeanShell_Interpreter-2.0.0-SNAPSHOT.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Bug_Submitter-2.1.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\CLI_-2.0.0-SNAPSHOT.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\CPU_Meter-2.0.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Calculator_Plus-2.0.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Cell_Counter-2.2.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Clojure_Interpreter-2.0.0-SNAPSHOT.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Colocalisation_Analysis-2.2.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Color_Histogram-2.0.6.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Color_Inspector_3D-2.3.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Colour_Deconvolution-3.0.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\jars\Compiler.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\CorrectBleach_-2.0.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Descriptor_based_registration-2.1.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Dichromacy_-2.1.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Differentials_-2.0.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Directionality_-2.0.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Extended_Depth_Field-2.0.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\FS_Align_TrakEM2-2.0.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Feature_Detection-2.0.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Fiji_Archipelago-2.0.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Fiji_Developer-2.0.5.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Fiji_Package_Maker-2.1.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Fiji_Plugins-3.0.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Fiji_Updater.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\FlowJ_-1.29.2.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Graph_Cut-1.0.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Gray_Morphology-2.3.3.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\H5J_Loader_Plugin-1.0.4.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Helmholtz_Analysis-2.0.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\IJ_Robot-2.0.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\IO_-3.0.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Image_5D-2.0.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Image_Expression_Parser-3.0.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Imaris\ImarisBridgeUtils.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Interactive_3D_Surface_Plot-2.4.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\IsoData_Classifier-2.0.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\JRuby_Interpreter-2.0.0-SNAPSHOT.jar;C:\Users\kellerj\Desktop\Fiji.app\jars\JWlz-1.4.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Javascript_-2.0.0-SNAPSHOT.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Jay_Plugins.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Jay_Plugins2.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Jay_Plugins3.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Jython_Interpreter-2.0.0-SNAPSHOT.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Kuwahara_Filter-2.0.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\KymographBuilder-1.2.3.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\LSM_Reader-4.1.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\LSM_Toolbox-4.1.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Lasso_and_Blow_Tool-2.0.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Linear_Kuwahara-2.0.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\LocalThickness_-4.0.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\MTrack2_-2.0.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\M_I_P-2.0.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Manual_Tracking-2.1.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\MosaicJ_-2.0.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Multi_Kymograph-2.0.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\PIV_analyser-1.1.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\PointPicker_-2.0.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\QuickPALM_-1.1.1.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\RATS_-2.0.0.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Reconstruct_Reader-2.0.2.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\Refresh_Javas-2.0.0-SNAPSHOT.jar;C:\Users\kellerj\Desktop\Fiji.app\plugins\SPIM_Opene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No javax.tools.JavaCompiler available. Checking for explicit javac.
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C:\Users\kellerj\Desktop\Fiji.app\java\win64\jdk1.8.0_66\jre\lib\rt.jar(java\io\File.class):
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major version 52 is newer than 51, the highest major version supported by
this compiler.
It is recommended that the compiler be upgraded.
warning:
C:\Users\kellerj\Desktop\Fiji.app\java\win64\jdk1.8.0_66\jre\lib\rt.jar(java\lang\IllegalArgumentException.class):
major version 52 is newer than 51, the highest major version supported by
this compiler.
It is recommended that the compiler be upgraded.
warning:
C:\Users\kellerj\Desktop\Fiji.app\java\win64\jdk1.8.0_66\jre\lib\rt.jar(java\lang\StringBuilder.class):
major version 52 is newer than 51, the highest major version supported by
this compiler.
It is recommended that the compiler be upgraded.
warning:
C:\Users\kellerj\Desktop\Fiji.app\java\win64\jdk1.8.0_66\jre\lib\rt.jar(java\lang\AbstractStringBuilder.class):
major version 52 is newer than 51, the highest major version supported by
this compiler.
It is recommended that the compiler be upgraded.
warning:
C:\Users\kellerj\Desktop\Fiji.app\java\win64\jdk1.8.0_66\jre\lib\rt.jar(java\lang\CharSequence.class):
major version 52 is newer than 51, the highest major version supported by
this compiler.
It is recommended that the compiler be upgraded.
C:\Users\kellerj\AppData\Local\Temp\java7624359557564000693\src\main\java\Image_Stabilizer.java:163:
cannot access java.lang.CharSequence
bad class file:
C:\Users\kellerj\Desktop\Fiji.app\java\win64\jdk1.8.0_66\jre\lib\rt.jar(java\lang\CharSequence.class)
bad constant pool tag: 18 at 10
Please remove or make sure it appears in the correct subdirectory of the
classpath.
                "Stablized " + imp.getShortTitle(), stackOut);
                             ^
1 error
28 warnings
org.scijava.minimaven.JavaCompiler$CompileError: Compile error: 1
at org.scijava.minimaven.JavaCompiler.call(JavaCompiler.java:105)
at org.scijava.minimaven.MavenProject.build(MavenProject.java:538)
at org.scijava.minimaven.MavenProject.build(MavenProject.java:463)
at org.scijava.minimaven.MavenProject.build(MavenProject.java:446)
at
org.scijava.plugins.scripting.java.JavaEngine.compile(JavaEngine.java:209)
at org.scijava.plugins.scripting.java.JavaEngine.eval(JavaEngine.java:136)
at org.scijava.plugins.scripting.java.JavaEngine.eval(JavaEngine.java:174)
at org.scijava.script.ScriptModule.run(ScriptModule.java:177)
at org.scijava.module.ModuleRunner.run(ModuleRunner.java:167)
at org.scijava.module.ModuleRunner.call(ModuleRunner.java:126)
at org.scijava.module.ModuleRunner.call(ModuleRunner.java:65)
at
org.scijava.thread.DefaultThreadService$2.call(DefaultThreadService.java:191)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)

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