ImageJ Applet and JSF

[Zummy]

Does anyone know of a JSF component that will start an ImageJ applet on the
client?  We want to pass a url to ImageJ with parameters.

Thanks,

 

John

[Paul McMillan]

I may be missing something, but did you look here? Would modifying one
of these examples work?

http://rsb.info.nih.gov/ij/applets.html

-Paul

(I missed them the first time around, I think they might be better
included in the dev section of the website, rather than only linked
from the front page)

On Fri, Dec 5, 2008 at 10:35 AM, John Carlson <[hidden email]> wrote:
> Does anyone know of a JSF component that will start an ImageJ applet on the
> client?  We want to pass a url to ImageJ with parameters.
>
> Thanks,
>
>
>
> John
>

[David Hovis]

Hello,

I've created a plugin I call TopoJ for computing topography from  
confocal stacks and hyperstacks.  I would like to distribute this  
plugin publicly and have it included on the ImageJ website.  What is  
the best way to do this?

Thanks,

--David

[Gabriel Landini]

On Friday 05 December 2008, David Hovis wrote:

> I've created a plugin I call TopoJ for computing topography from
> confocal stacks and hyperstacks.  I would like to distribute this
> plugin publicly and have it included on the ImageJ website.  What is
> the best way to do this?

Make a plugin html description page like the ones at the IJ site and send it
to Wayne, or upload to your own site and post here, or use:
http://imagejdocu.tudor.lu/doku.php?id=plugin:start

G.

[Andreas Jahnen]

Dear David,

you can publish the pages at the ImageJ homepage (just send the pages to
Wayne) or you can create yourself pages at the ImageJ Documentation Wiki
(http://imagejdocu.tudor.lu) in the section "plugins".

Best Regards,
Andreas

-----------------------------------------------------------------
Andreas Jahnen  -  Ingenieur de Recherche
[hidden email]
-----------------------------------------------------------------
CRP Henri Tudor  -  http://santec.tudor.lu
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ImageJ Interest Group <[hidden email]> wrote on 12/05/2008 09:09:38
PM:

> David Hovis <[hidden email]>
> Sent by: ImageJ Interest Group <[hidden email]>
>
> 12/05/2008 09:15 PM
>
> Please respond to
> ImageJ Interest Group <[hidden email]>
>
> To
>
> [hidden email]
>
> cc
>
> Subject
>
> Making Plugins Available
>
> Hello,
>
> I've created a plugin I call TopoJ for computing topography from
> confocal stacks and hyperstacks.  I would like to distribute this
> plugin publicly and have it included on the ImageJ website.  What is
> the best way to do this?
>
> Thanks,
>
> --David

... [show rest of quote]

[Richard Mort]

Hi,
I'd like to determine the longest axis of a particle in Analyze
particles and draw a line along it. Analyze particles nicely converts my
field of cells into ellipses. So all I'd like to do is then convert each
ellipse into a line along its longest axis so I have a graphical
representation of each cell's orientation. It would be good to exclude
any ellipse that is pretty much circular. I can get as far as ellipses with:

{
run("Make Binary");
run("Minimum...", "radius=0.5");
run("BinaryFilterReconstruct ", "erosions=1 white");
run("Fill Holes");
run("Analyze Particles...", "size=0-Infinity circularity=0.00-1.00
show=Ellipses display clear include summarize record");
}

Is this possible? I'm sure someone must have tried this before?

--
Dr Richard Mort
MRC Human Genetics Unit
Western General Hospital
Crewe Road
Edinburgh
EH4 2XU, UK.

Phone: [phone] x 3205
Fax: [phone]

[Gabriel Landini]

On Thursday 12 February 2009 09:34:24 Richard Mort wrote:
> Hi,
> I'd like to determine the longest axis of a particle in Analyze
> particles and draw a line along it. Analyze particles nicely converts my
> field of cells into ellipses.

Hi Richard,
The macro DrawFeret&Breadth.txt in the morphology collection does that, but
uses the particles8 plugin instead of the Particle analyzer.
(Make sure that you have the latest version).

Cheers

G.