ImgLib2 and RGB Stack Images / Extending TrackMate

[jumpfunky]

Dear list,

I currently want to extend TrackMate with a spot feature for RGB Stacks.
I want to calculate the hue of the center for each spot to filter the
particle by color before connecting the dots to tracks.

However, TrackMate uses ImgLib2 and I wondering how to work with RGB
Stack images. I cant find any examples how to do that.

Any help is highly appreciated!

Cheers,
Thorsten

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[Rasband, Wayne (NIH/NIMH) [E]]

On Mar 9, 2015, at 1:04 PM, Thorsten Wagner <[hidden email]> wrote:
>
> Dear list,
>
> I currently want to extend TrackMate with a spot feature for RGB Stacks.
> I want to calculate the hue of the center for each spot to filter the
> particle by color before connecting the dots to tracks.
>
> However, TrackMate uses ImgLib2 and I wondering how to work with RGB
> Stack images. I cant find any examples how to do that.

The imagej-devel mailing list is the best place to ask questions about ImgLib2.

   http://imagej.net/mailman/listinfo/imagej-devel

-wayne

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