Isosurface rendering

[steven.f.lee]

Hey All

I have a series of x,y,z coordinates and I'm looking for a way to render them in 3D to form a nice iso- surface

I realise this can be done in ImageJ's "3D Project.." function, but I wondered does anyone know of a plugin that might make this whole process a bit easier

Many thanks

Steve

[Philip Ershler]

Get the Interactive 3D plugin from the ImageJ site.

Phil

On Nov 13, 2009, at 2:03 PM, steven.f.lee wrote:

> Hey All
>
> I have a series of x,y,z coordinates and I'm looking for a way to render
> them in 3D to form a nice iso- surface
>
> I realise this can be done in ImageJ's "3D Project.." function, but I
> wondered does anyone know of a plugin that might make this whole process a
> bit easier
>
> Many thanks
>
> Steve
> --
> View this message in context: http://n2.nabble.com/Isosurface-rendering-tp4001493p4001493.html
> Sent from the ImageJ mailing list archive at Nabble.com.

[Michael Doube]

Hi Philip,

I've implemented this in my BoneJ plugin as an Isosurface plugin; it's
very simple and takes a binary stack as input.

http://github.com/mdoube/BoneJ/blob/master/src/org/doube/bonej/MeasureSurface.java

http://doube.org/files/BoneJ_.jar

Mike

Philip Ershler wrote:

> Get the Interactive 3D plugin from the ImageJ site.
>
> Phil
>
> On Nov 13, 2009, at 2:03 PM, steven.f.lee wrote:
>
>> Hey All
>>
>> I have a series of x,y,z coordinates and I'm looking for a way to render
>> them in 3D to form a nice iso- surface
>>
>> I realise this can be done in ImageJ's "3D Project.." function, but I
>> wondered does anyone know of a plugin that might make this whole process a
>> bit easier
>>
>> Many thanks
>>
>> Steve
>> --
>> View this message in context: http://n2.nabble.com/Isosurface-rendering-tp4001493p4001493.html
>> Sent from the ImageJ mailing list archive at Nabble.com.

--
Dr Michael Doube  BPhil BVSc PhD MRCVS
Research Associate
Department of Bioengineering
Imperial College London
South Kensington Campus
London  SW7 2AZ
United Kingdom