Issues launching and updating FIJI

[Christian Goosmann-2]

Dear Group,
for some weeks now I am observing strange behaviour of FIJI on several
computers under Win7.
Fiji takes much longer to launch an throws an exception when started
like the following, but otherwise seems to work normal.

(Fiji Is Just) ImageJ 1.48t; Java 1.6.0_24 [32-bit]; Windows 7 6.1; 16MB
of 1500MB (1%)

java.lang.RuntimeException: java.lang.reflect.InvocationTargetException
     at fiji.updater.Adapter.check(Adapter.java:276)
     at fiji.updater.Adapter.checkOrShowDialog(Adapter.java:78)
     at fiji.updater.Updater.run(Updater.java:14)
     at fiji.updater.UptodateCheck.run(UptodateCheck.java:8)
     at fiji.FijiTools.runPlugInGently(FijiTools.java:391)
     at fiji.FijiTools.runUpdater(FijiTools.java:401)
     at fiji.patches.FijiInitializer$1.run(FijiInitializer.java:44)
Caused by: java.lang.reflect.InvocationTargetException
     at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
     at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
     at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
     at java.lang.reflect.Method.invoke(Method.java:597)
     at fiji.updater.Adapter.invokeStatic(Adapter.java:449)
     at fiji.updater.Adapter.check(Adapter.java:274)
     ... 6 more
Caused by: java.io.EOFException: Unexpected end of ZLIB input stream
     at java.util.zip.InflaterInputStream.fill(InflaterInputStream.java:223)
     at java.util.zip.InflaterInputStream.read(InflaterInputStream.java:141)
     at java.util.zip.GZIPInputStream.read(GZIPInputStream.java:92)
     at java.util.zip.InflaterInputStream.read(InflaterInputStream.java:105)
     at
com.sun.org.apache.xerces.internal.impl.XMLEntityManager$RewindableInputStream.read(XMLEntityManager.java:2932)
     at
com.sun.org.apache.xerces.internal.impl.XMLEntityManager.setupCurrentEntity(XMLEntityManager.java:704)
     at
com.sun.org.apache.xerces.internal.impl.XMLVersionDetector.determineDocVersion(XMLVersionDetector.java:186)
     at
com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(XML11Configuration.java:772)
     at
com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(XML11Configuration.java:737)
     at
com.sun.org.apache.xerces.internal.parsers.XMLParser.parse(XMLParser.java:119)
     at
com.sun.org.apache.xerces.internal.parsers.AbstractSAXParser.parse(AbstractSAXParser.java:1205)
     at
com.sun.org.apache.xerces.internal.jaxp.SAXParserImpl$JAXPSAXParser.parse(SAXParserImpl.java:522)
     at imagej.updater.core.XMLFileReader.read(XMLFileReader.java:135)
     at imagej.updater.core.XMLFileReader.read(XMLFileReader.java:111)
     at imagej.updater.core.FilesCollection.read(FilesCollection.java:367)
     at imagej.updater.core.FilesCollection.read(FilesCollection.java:361)
     at imagej.updater.core.FilesCollection.read(FilesCollection.java:355)
     at imagej.updater.core.UpToDate.check(UpToDate.java:108)
     at imagej.updater.core.UpToDate.check(UpToDate.java:84)
     ... 12 more
I tried to update FIJI, but I'm not confident that the updater is
working. It seems to work normal at first but then doesn't close at all
using either the close-button or the close window "X". It is still
possible to use FIJI leaving the updater window open though.
Any one else experiencing this, and any hints how to repair it?
Thank you so much.
Christian

--
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Christian Goosmann
Mikroskopie
Max-Planck-Institut für Infektionsbiologie
Campus Charité Mitte
Charitéplatz 1
10117 Berlin
Tel.: [phone]

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