I noticed from here
http://rsb.info.nih.gov/ij/notes.html theres a mention
of a fix for images modified in LibTIFF, so I upgraded to 1.41b but I still
have the same problem as before. It seems the stripoffset is not being read
correctly still.
Here is an example stack:
http://brennanlab.mednet.ucla.edu/example/combined.tiffThanks you for the great work of all ImageJ contributors!