I have a question about the plug-in called volumest to calculate volume. I have MRI images of mice brains and I want to find the most accurate and efficient way to measure striatal volume. I am stuck at the starting line.
First, I dragged and dropped the folder with all the specs and images in it. The specs from the method folder and all the information matched up (matrix, slice thickness, order list).
Then when I go to plug-ins and click on volumest, it says "Image must be calibrated. Use straight line sections button and Analyze/ Set scale menu." My understanding is when downloading the image, it also downloads the calibration information.
Is there something I did wrong that jumps out at you or am I going about this the right way? I am open to using different plug-ins or different ways to go about this.
Please help. Any info will be greatly appreciated. Thank you!!
--
ImageJ mailing list:
http://imagej.nih.gov/ij/list.html