Hello ImageJ Community, I hope this request finds you all well.
I am currently trying to modify the columns that are being output from my
results. I would like my summary to include (total area, max particle size,
mean particle size, possibly standard deviation)
I am running the following batch micro on a folder -
first = 100;
nBins = 256;
run("Clear Results");
thold = 0;
getHistogram(values, counts, nBins);
for (i=first; i<nBins; i++) {
if (counts[i]>125 && counts[i]>counts[i-1]) {
thold = i-1;
i = 300;
}
}
setThreshold(0, thold);
setOption("BlackBackground", false);
run("Convert to Mask");
makeRectangle(150, 100, 1075, 885);
run("Crop");
run("Analyze Particles...", " circularity=.1-1.00 display clear include
summarize");
run("Summarize");
see attached images for reference of current results
<
http://imagej.1557.x6.nabble.com/file/t382285/Summary.png>
<
http://imagej.1557.x6.nabble.com/file/t382285/Results.png>
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