Particle remover in Fiji?

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Particle remover in Fiji?

Rodrigo Gonçalves
In the past I have used the simple and effective Particle Remover plugin for ImageJ. It's great because it allows to remove particles using the same user interaction as with Analyze Particles (ie delete particles of certain size range, etc).

Nowadays I use mostly Fiji and was wondering if there is an equivalent of Particle Remover included? I see there are tons of plugins and several "particle" ones, maybe one of those includes the functionality to remove particles? (sorry I didn't have time to try them all!)

Thanks, Rodrigo

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Re: Particle remover in Fiji?

jumpfunky
Hi,

you can use the shape filter plugin:
https://code.google.com/p/ijblob/

Cheers,
Thorsten

Am Donnerstag, den 30.10.2014, 03:28 +0000 schrieb Rodrigo Gonçalves:
> In the past I have used the simple and effective Particle Remover plugin for ImageJ. It's great because it allows to remove particles using the same user interaction as with Analyze Particles (ie delete particles of certain size range, etc).
>
> Nowadays I use mostly Fiji and was wondering if there is an equivalent of Particle Remover included? I see there are tons of plugins and several "particle" ones, maybe one of those includes the functionality to remove particles? (sorry I didn't have time to try them all!)
>
> Thanks, Rodrigo
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html

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Re: Particle remover in Fiji?

dscho
In reply to this post by Rodrigo Gonçalves
Hi Rodrigo,

On Thu, 30 Oct 2014, Rodrigo Gonçalves wrote:

> In the past I have used the simple and effective Particle Remover plugin
> for ImageJ. It's great because it allows to remove particles using the
> same user interaction as with Analyze Particles (ie delete particles of
> certain size range, etc).
>
> Nowadays I use mostly Fiji and was wondering if there is an equivalent
> of Particle Remover included? I see there are tons of plugins and
> several "particle" ones, maybe one of those includes the functionality
> to remove particles? (sorry I didn't have time to try them all!)

Fiji is just a distribution of ImageJ with a lot of plugins. You can
easily install any third-party plugins manually (although it is strongly
recommended for plugin authors to make it easier for users by offering
their plugins via update sites [*1*]).

Ciao,
Johannes

Footnote *1*: For more information about update sites, please have a look
at http://imagej.net/Update_sites.

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