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I seem to have a problem with interference between the 'install macro'
command and the 'run Import raw' command.
When I run the code below I get the expected results and the user selected
raw file is opened properly.
.
path = File.openDialog("Select a 100% Q Size Rice Raw Image")
//verify (path); // verify the file
dir = File.getParent(path);
name = File.getName(path);
//Open the raw image file
run("Raw...", "open=[path] image=[16-bit Unsigned] width=7364
height=17744 offset=0 number=1 gap=0 little-endian");
.
If I precede the above code with a command to install a macro:
run("Install...", "install=[C:\\Program
Files\\ImageJ\\plugins\\Cut_Count_Measure_CNRRI.txt]");
the macro is installed properly but I get the following errors when the code
reaches run("Raw. in my code to open the raw file.
java.io.FileNotFoundException: path (The system cannot find the
file specified)
at java.io.FileInputStream.open(Native Method)
at java.io.FileInputStream.<init>(Unknown Source)
at ij.io.FileOpener.createInputStream(FileOpener.java:464)
at ij.io.FileOpener.readPixels(FileOpener.java:521)
at ij.io.FileOpener.open(FileOpener.java:77)
at ij.io.ImportDialog.openImage(ImportDialog.java:160)
at ij.plugin.Raw.run(Raw.java:20)
at ij.IJ.runPlugIn(IJ.java:157)
at ij.Executer.runCommand(Executer.java:124)
at ij.Executer.run(Executer.java:61)
at ij.IJ.run(IJ.java:250)
at ij.macro.Functions.doRun(Functions.java:553)
at ij.macro.Functions.doFunction(Functions.java:74)
at ij.macro.Interpreter.doStatement(Interpreter.java:200)
at ij.macro.Interpreter.doStatements(Interpreter.java:188)
at ij.macro.Interpreter.run(Interpreter.java:99)
at ij.macro.Interpreter.run(Interpreter.java:71)
at ij.macro.MacroRunner.run(MacroRunner.java:124)
at java.lang.Thread.run(Unknown Source)
Can anyone suggest a solution?
Dan
Daniel W. McDonald, President
Phenotype Screening Corporation
4028 Papermill Rd, Suite 10
Knoxville, TN 37909
(865) 385-8641
Our product, RootViz FS, was a 2007 R&D100 Award Winner. Rated as one of the
100 most technologically significant products introduced into the
marketplace in the prior year.
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