Hi All,
I try to use the Fiji/3D viewer but I got some problems : With the current release from http://3dviewer.neurofly.de/: I can't change the slice in orthoslice view. The Reset view function in not working I can't fill a selection to remove part of the image : the function doesn't seem to exist anymore. Any ideas to get it to work correctly ???? Thanks Eric -- Eric Denarier Grenoble Institut des Neurosciences Inserm U836 Chemin Fortuné Ferrini 38700 La Tronche France Tél :33 (0)4 56 52 05 38 Fax :33 (0)4 56 52 06 57 http://neurosciences.ujf-grenoble.fr/ -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html 3Dviewer.PNG (30K) Download Attachment |
Hi Eric,
Everything is fine on my version, I think I downloaded it from same website. Some remarks tough : * try with fiji, version of 3D viewer should be more up-to-date * in orthoslice mode, edit/adjust ortho slices * edit/fill selection, works only in volume mode. Hope this helps, Best, Thomas > Hi All, > I try to use the Fiji/3D viewer but I got some problems : > With the current release from http://3dviewer.neurofly.de/: > I can't change the slice in orthoslice view. > The Reset view function in not working > I can't fill a selection to remove part of the image : the function > doesn't seem to exist anymore. > > Any ideas to get it to work correctly ???? > > Thanks > > Eric > > > > -- > > Eric Denarier > Grenoble Institut des Neurosciences > Inserm U836 > Chemin Fortuné Ferrini > 38700 La Tronche > France > > > Tél :33 (0)4 56 52 05 38 > Fax :33 (0)4 56 52 06 57 > > http://neurosciences.ujf-grenoble.fr/ > > > -- > ImageJ mailing list: http://imagej.nih.gov/ij/list.html > -- Thomas Boudier, Associate Prof. UPMC, IPAL UMI 2955, Singapore. -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html |
Hi Thomas,
The problem is that there is no function Fill in the Edit tag of 3D viewer version of the Fiji I am currently using (see enclosed picture). I am using Fiji with ImageJ 1.49g with 32bits Windows7 Eric Denarier Grenoble Institut des Neurosciences Inserm U836 Chemin Fortuné Ferrini 38700 La Tronche France Tél :33 (0)4 56 52 05 38 Fax :33 (0)4 56 52 06 57 http://neurosciences.ujf-grenoble.fr/ Le 16/09/2014 11:28, Thomas Boudier a écrit : > Hi Eric, > > Everything is fine on my version, I think I downloaded it from same > website. Some remarks tough : > > * try with fiji, version of 3D viewer should be more up-to-date > * in orthoslice mode, edit/adjust ortho slices > * edit/fill selection, works only in volume mode. > > Hope this helps, > > Best, > > Thomas > > >> Hi All, >> I try to use the Fiji/3D viewer but I got some problems : >> With the current release from http://3dviewer.neurofly.de/: >> I can't change the slice in orthoslice view. >> The Reset view function in not working >> I can't fill a selection to remove part of the image : the function >> doesn't seem to exist anymore. >> >> Any ideas to get it to work correctly ???? >> >> Thanks >> >> Eric >> >> >> >> -- >> >> Eric Denarier >> Grenoble Institut des Neurosciences >> Inserm U836 >> Chemin Fortuné Ferrini >> 38700 La Tronche >> France >> >> >> Tél :33 (0)4 56 52 05 38 >> Fax :33 (0)4 56 52 06 57 >> >> http://neurosciences.ujf-grenoble.fr/ >> >> >> -- >> ImageJ mailing list: http://imagej.nih.gov/ij/list.html >> > -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html 3Dviewer.PNG (66K) Download Attachment |
> Hi Thomas,
> The problem is that there is no function Fill in the Edit tag of 3D > viewer version of the Fiji I am currently using (see enclosed picture). > I am using Fiji with ImageJ 1.49g with 32bits Windows7 Hi, In the Fiji version, some functions are available in the context menu after selecting a volume (right-click), you will find fill selection. Best, Thomas > > Eric Denarier > Grenoble Institut des Neurosciences > Inserm U836 > Chemin Fortuné Ferrini > 38700 La Tronche > France > > > Tél :33 (0)4 56 52 05 38 > Fax :33 (0)4 56 52 06 57 > > http://neurosciences.ujf-grenoble.fr/ > > Le 16/09/2014 11:28, Thomas Boudier a écrit : >> Hi Eric, >> >> Everything is fine on my version, I think I downloaded it from same >> website. Some remarks tough : >> >> * try with fiji, version of 3D viewer should be more up-to-date >> * in orthoslice mode, edit/adjust ortho slices >> * edit/fill selection, works only in volume mode. >> >> Hope this helps, >> >> Best, >> >> Thomas >> >> >>> Hi All, >>> I try to use the Fiji/3D viewer but I got some problems : >>> With the current release from http://3dviewer.neurofly.de/: >>> I can't change the slice in orthoslice view. >>> The Reset view function in not working >>> I can't fill a selection to remove part of the image : the function >>> doesn't seem to exist anymore. >>> >>> Any ideas to get it to work correctly ???? >>> >>> Thanks >>> >>> Eric >>> >>> >>> >>> -- >>> >>> Eric Denarier >>> Grenoble Institut des Neurosciences >>> Inserm U836 >>> Chemin Fortuné Ferrini >>> 38700 La Tronche >>> France >>> >>> >>> Tél :33 (0)4 56 52 05 38 >>> Fax :33 (0)4 56 52 06 57 >>> >>> http://neurosciences.ujf-grenoble.fr/ >>> >>> >>> -- >>> ImageJ mailing list: http://imagej.nih.gov/ij/list.html >>> >> > > > -- > ImageJ mailing list: http://imagej.nih.gov/ij/list.html > -- Thomas Boudier, Associate Prof. UPMC, IPAL UMI 2955, Singapore. -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html snapshot7.png (71K) Download Attachment |
That was my problem : the contextual menu !!!! Sorry, that I did'nt
think about it. Thanks for your help Thomas. Eric Denarier Grenoble Institut des Neurosciences Inserm U836 Chemin Fortuné Ferrini 38700 La Tronche France Tél :33 (0)4 56 52 05 38 Fax :33 (0)4 56 52 06 57 http://neurosciences.ujf-grenoble.fr/ Le 17/09/2014 08:45, Thomas Boudier a écrit : >> Hi Thomas, >> The problem is that there is no function Fill in the Edit tag of 3D >> viewer version of the Fiji I am currently using (see enclosed picture). >> I am using Fiji with ImageJ 1.49g with 32bits Windows7 > Hi, > > In the Fiji version, some functions are available in the context menu > after selecting a volume (right-click), you will find fill selection. > > Best, > > Thomas > >> Eric Denarier >> Grenoble Institut des Neurosciences >> Inserm U836 >> Chemin Fortuné Ferrini >> 38700 La Tronche >> France >> >> >> Tél :33 (0)4 56 52 05 38 >> Fax :33 (0)4 56 52 06 57 >> >> http://neurosciences.ujf-grenoble.fr/ >> >> Le 16/09/2014 11:28, Thomas Boudier a écrit : >>> Hi Eric, >>> >>> Everything is fine on my version, I think I downloaded it from same >>> website. Some remarks tough : >>> >>> * try with fiji, version of 3D viewer should be more up-to-date >>> * in orthoslice mode, edit/adjust ortho slices >>> * edit/fill selection, works only in volume mode. >>> >>> Hope this helps, >>> >>> Best, >>> >>> Thomas >>> >>> >>>> Hi All, >>>> I try to use the Fiji/3D viewer but I got some problems : >>>> With the current release from http://3dviewer.neurofly.de/: >>>> I can't change the slice in orthoslice view. >>>> The Reset view function in not working >>>> I can't fill a selection to remove part of the image : the function >>>> doesn't seem to exist anymore. >>>> >>>> Any ideas to get it to work correctly ???? >>>> >>>> Thanks >>>> >>>> Eric >>>> >>>> >>>> >>>> -- >>>> >>>> Eric Denarier >>>> Grenoble Institut des Neurosciences >>>> Inserm U836 >>>> Chemin Fortuné Ferrini >>>> 38700 La Tronche >>>> France >>>> >>>> >>>> Tél :33 (0)4 56 52 05 38 >>>> Fax :33 (0)4 56 52 06 57 >>>> >>>> http://neurosciences.ujf-grenoble.fr/ >>>> >>>> >>>> -- >>>> ImageJ mailing list: http://imagej.nih.gov/ij/list.html >>>> >> >> -- >> ImageJ mailing list: http://imagej.nih.gov/ij/list.html >> > -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html |
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