> Hello Aryeh,
>
> The information about Skeletonize3D is here:
http://fiji.sc/Skeletonize3D>
> It is an implementation of the thinning algorithm by Lee et al. (1994):
>
http://dl.acm.org/citation.cfm?id=202862.202867>
> There quite a few different skeletonization algorithms out there ;)
>
> ignacio
>
> On Thu, Mar 3, 2016 at 2:20 PM, Aryeh Weiss <
[hidden email]> wrote:
>
> > I have two skeletonize plugins that come with Fiji. The entries in the
> > command finder are:
> >
> > Process>Binary Skeletonize ij.plugin.filter.Binary("skel")
> >
> > and
> >
> > Plugins>Skeleton Skeletonize (2D/3D)
> > sc.fiji.skeletonize3D.Skeletonize3D_
> > /Applications/local/fiji/Fiji.app/plugins/Skeletonize3D_-2.0.0.jar
> >
> >
> > I find that these produce two different results. I attached a test image
> > and the two results
> > (skeletonizBinary is the first one, and skeletonize2D3D is the second).
> >
> > Searching the archives for skeletonize turns up a number of posts that
> > indicate that there may be different valid ways to skeletonize (eg,
> > 4-connected vs 8-connected).. So I wonder is there are methodological
> > differences between these two, an if so, what they are.
> >
> > Thanks in advance
> > --aryeh
> >
> > --
> > Aryeh Weiss
> > Faculty of Engineering
> > Bar Ilan University
> > Ramat Gan 52900 Israel
> >
> > Ph: 972-3-5317638
> > FAX: 972-3-7384051
> >
> >
> > --
> > ImageJ mailing list:
http://imagej.nih.gov/ij/list.html> >
>
>
>
> --
> Ignacio Arganda-Carreras, Ph.D.
> Ikerbasque Research Fellow
> Departamento de Ciencias de la Computacion e Inteligencia Artificial
> Facultad de Informatica, Universidad del Pais Vasco
> Paseo de Manuel Lardizabal, 1
> 20018 Donostia-San Sebastian
> Guipuzcoa, Spain
>
> Phone : +34 943 01 73 25
> Website:
http://sites.google.com/site/iargandacarreras/> <
http://biocomp.cnb.csic.es/~iarganda/index_EN.html>
>
> --
> ImageJ mailing list:
http://imagej.nih.gov/ij/list.html>
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