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Hello all,
We do have a macro "Analyze Particles" (the copy is joined below).
We would like to add to that macro a watershed function.
We tried to add run("Watershed"); just after setThreshold(30, 80); but
this did not work. A message telling "8-bit binary image (0 and 255)
required" appears.
Anybody has a solution???
Thanks a lot
Best regards
Michelina Nascimbeni
requires("1.38o");
dir = getDirectory("Choose a Directory ");
list = getFileList(dir);
setBatchMode(true);
for (i=0; i<list.length; i++) {
showProgress(i, list.length);
open(dir+list[i]);
getStatistics(area, mean, min, max, std);
threshold = mean + 2.5*std;
setThreshold(30, 80);
run("Analyze Particles...", "size=100-650 summarize");
close;
}
selectWindow("Summary");
saveAs("Text", getDirectory("home")+"Summary.txt");
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