ROI header

[James Ewing]

Fellow ImageJ users:

I'm attempting to write some C code to convert an ImageJ roi to our Henry Ford Hospital format (EigenTool).  This latter isn't much used outside of our institution, but our users are familiar with it and use it intensively.  I'm trying to move the users over to ImageJ and need a tool that will allow us to move back and forth between the two image processing environments.

Can anybody point to documentation for the header structure of the ImageJ roi?  Ideally, this would be a C-type *.h header, but I'd be happy to get a map of the structure in any format.

 - Jim Ewing


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[Rasband, Wayne (NIH/NIMH) [E]]

On Oct 16, 2011, at 12:57 PM, James Ewing wrote:

> Fellow ImageJ users:
>
> I'm attempting to write some C code to convert an ImageJ roi to our Henry Ford Hospital format (EigenTool).  This latter isn't much used outside of our institution, but our users are familiar with it and use it intensively.  I'm trying to move the users over to ImageJ and need a tool that will allow us to move back and forth between the two image processing environments.
>
> Can anybody point to documentation for the header structure of the ImageJ roi?  Ideally, this would be a C-type *.h header, but I'd be happy to get a map of the structure in any format.

The format of .roi files is described at the beginning of the RoiDecoder.java source file.

    http://imagej.nih.gov/ij/developer/source/ij/io/RoiDecoder.java.html

-wayne