Re: save trakEM2 ROIs as ImageJ .roi?

[Albert Cardona-2]

2012/6/23 Bill Mohler <[hidden email]>:
> Tried this in Fiji in the script editor, set to python.
> Many errors. Is there a different editor or interpreter I should be using?
>
> Thanks, Bill


Works here. What errors?

Albert

> On 6/19/12 4:11 p.m., Albert Cardona wrote:
>
> 2012/6/19 Bill Mohler <[hidden email]>:
>
> Hi Albert & Johannes-
>
> Amazed at how powerful TrakEM2 is! But I haven't found an answer on-line to
> what I think is a simple question: can I save area lists and connectors as
> ImageJ R0Is or get them info the ROI Manager? I have some good reasons to
> need to do this.
>
> Thanks,
> Bill
>
> Bill,
>
> a jython script would do it:
>
> http://fiji.sc/wiki/index.php/TrakEM2_Scripting#Extract_areas_from_an_arealist_and_put_them_as_ROIs_in_ImageJ.27s_ROI_Manager
>
>
>

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[Albert Cardona-2]

2012/6/23 Bill Mohler <[hidden email]>:
> More progress now.  But now it says I haven't selected an arealist, when I
> think I have.  Which field/item should be selected when I start the script?
>  Screenshot possible?
> Thanks!


http://www.ini.uzh.ch/~acardona/trakem2_manual.html#selecting



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