Dear all,
Today we are releasing Bio-Formats 5.5.3 which includes the following changes:
File format fixes and improvements:
* Zeiss CZI
* fix to store Bézier ROIs as polygons, using the control points for the set of Bézier curves to form an approximation of the ROI
* improved parsing of stage positions in metadata
* improved parsing of detector gain values
* removed OME-XML validation errors by fixing potential for duplicate detector IDs
* removed invalid XML failures for Modulo label elements
* time increment metadata now populated on Pixels element
* fix to deal with consecutive empty planes in a series (thanks to Nicholas Trahearn)
* DICOM
* no longer allow core metadata to be modified when determining if files belong to a DICOM dataset
* Nikon NIS-Elements ND2
* fixed calculation for scanline padding
* Kodak BIP
* stricter file type checking enforced by no longer relying only on the file suffix
* MINC MRI
* improved parsing of metadata by correcting units for physical sizes, pixel type and capturing XYZ plane positions in OME-XML
* Bio-Rad Gel
* fixed the width of pixel data offset field
* DeltaVision
* improved accuracy of format detection checking for input streams
* Andor SIF
* fixed support for cropped images by parsing bounding box of the stored image
Documentation improvements:
* Olympus cellSens VSI updated to include list of available specifications
Full details can be found at
http://www.openmicroscopy.org/site/support/bio-formats5.5/about/whats-new.htmlThe software is available at:
http://downloads.openmicroscopy.org/bio-formats/5.5.3and will shortly be available from the Java-8 update site for Fiji users.
Any problems or comments, please use the OME Forums or mailing lists:
http://www.openmicroscopy.org/site/communityRegards,
The OME Team
The University of Dundee is a registered Scottish Charity, No: SC015096
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