Hi,
On Sun, 30 Jan 2011, Rutger Wierda wrote:
> I've found a great plugin for ImgeJ to count nuclei (see:
>
http://www.bioimage.ucsb.edu/automatic-nuclei-counter-plug-in-for-imagej).
> This plugin performs better in nuclei detection than the nucleus counter
> plugin from the MBF bundle (
http://www.macbiophotonics.ca/imagej/)
>
> This plugin requires the user to press the 'count' button. I would like
> to implement this in a macro so I can batch process images. Is there
> anyway to perform a 'mouse-click on the right button' so to say in a
> macro?
You may be interested in the IJ Robot:
http://pacific.mpi-cbg.de/IJ_Robot
(it is actually usable outside Fiji as well).
Ciao,
Johannes
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