Hi,
You should be able to set the Voxel Depth thru Images->Properties (or
ctrl+shift+p). There you can manually set the pixel xyz to the correct
proportion.
I think that's it!
bruno
On Jan 19, 2008 7:07 PM, Declan James <
[hidden email]> wrote:
> Dear ImageJ users
>
> Could you lend me some help? I would like to set the z scale so that it
> matches the z step size of the Nikon confocal stack. Each pixel has an
> xyz of 0.4 X 0.4 X 0.1 um. At the moment after I set the scale within
> Imagej I get pixels with xyz of 0.4 x 0.4 x 0.4 um(cubes). The stack is
> imported into ImageJ using the very useful Ics opener. When I use the
> ImageJ 3D viewer to create a projection I get an artifically elongated
> image in the z axis.
>
> Thanks
>
> Declan
>
--
Bruno C. Vellutini
organelas.com | ccnelas.org | desertoresdaescada.com
Centro de Biologia Marinha (CEBIMar)
Universidade de São Paulo
Av. Manoel H. do Rego km 131,5
11600-000 São Sebastião, SP, Brasil
http://www.usp.br/cbm/
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