Sparse detailed images

[Thomas Eschner]

Dear all,

the following problem was presented to me:

A colleage wants to follow a feature (a winding contour) with great detail.
When he stitches individual images together, he ends up with really huge images (> 0.5 GByte is huge to me).

Is there something like a "best practice" to deal with that type of requirement?

Thanks in advance,
Thomas

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[Christian Goosmann]

Thomas Eschner wrote:

> Dear all,
>
> the following problem was presented to me:
>
> A colleage wants to follow a feature (a winding contour) with great detail.
> When he stitches individual images together, he ends up with really huge images (> 0.5 GByte is huge to me).
>
> Is there something like a "best practice" to deal with that type of requirement?
>
> Thanks in advance,
> Thomas
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

Dear Thomas,
I would recommend the TrakEM2 plugin which comes with the FIJI package
of ImageJ. It is used to virtually stitch and stack thousands of TEM
images without ever having a complete stitched image at finest
resolution in the computer memory.
There is enough documentation around to get started with it easily.
Good luck
Christian

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ImageJ mailing list: http://imagej.nih.gov/ij/list.html

[Thomas Eschner]

Dear Christian,

thank you. I will start reading now...

Kind regards,
Thomas

-------- Original-Nachricht --------
> Datum: Wed, 31 Oct 2012 17:12:05 +0100
> Von: Christian Goosmann <[hidden email]>
> An: [hidden email]
> Betreff: Re: Sparse detailed images

> Thomas Eschner wrote:
> > Dear all,
> >
> > the following problem was presented to me:
> >
> > A colleage wants to follow a feature (a winding contour) with great
> detail.
> > When he stitches individual images together, he ends up with really huge
> images (> 0.5 GByte is huge to me).
> >
> > Is there something like a "best practice" to deal with that type of
> requirement?
> >
> > Thanks in advance,
> > Thomas
> >
> > --
> > ImageJ mailing list: http://imagej.nih.gov/ij/list.html
> >
> Dear Thomas,
> I would recommend the TrakEM2 plugin which comes with the FIJI package
> of ImageJ. It is used to virtually stitch and stack thousands of TEM
> images without ever having a complete stitched image at finest
> resolution in the computer memory.
> There is enough documentation around to get started with it easily.
> Good luck
> Christian
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html

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ImageJ mailing list: http://imagej.nih.gov/ij/list.html