Most commands in the Stack menu are applicable to sub-parts of the stacks,
that is, you select an ROI and then the command only applies to that ROI.
As far as I can see it works correctly with these commands:
run("3D Project...",
run("Plot Z-axis Profile");
run("Reslice [/]...",
run("Make Substack...",
run("Statistics");
However, some commands fails to recognize the ROI and processes the entire XY extent of the stack.
The following commands fails to recognize the current ROI:
run("Grouped Z Project...",
run("Z Project...",
run("Make Montage...",
Is this intentional, or is it a bug?
I am using daily build ImageJ 1.51s on Windows 7 64-bit.
Stein
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