Claire,
> this is due to the fact that unlike turboReg, it never allowed me to
> manually set the reference points on the reference image. I am not sure how
> to make this work. Does anyone have any advice? Please?
> Thanks and have a great week,
> Claire
>
I refer you to an alternative plugin for image registration in ImageJ:
http://www.ini.uzh.ch/~acardona/howto.html#register_virtual_stackAlbert
--
Albert Cardona
http://www.mcdb.ucla.edu/Research/Hartenstein/acardona