I have a time lapse series with data collected at 3 positions over time. I am trying to stitch the three positions together with TrakEM2 so I can overlap the positions, but without much success. If I "import image stack", I get two choices in the next dialog box- as “one slice per layer (patches) or Image Volume (stack). If I use image volume, I only get one slice imported for each stack. If I use "one slice per layer", I get all, but they are unlinked so that if I move the image I can see, it only moves the one time point and not the whole stack. I can’t find any documentation of these options so I am not sure what the meaning of the choices is or how to get a time series imported correctly. Can anyone help? Thanks- Dave
Dr. David Knecht
Professor
Department of Molecular and Cell Biology
University of Connecticut
91 N. Eagleville Rd.
Storrs, CT 06269
860-486-2200
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