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I have a multi-channel image. Red green and blue. I split the channels into individual images and then threshold each of them. I want a macro that auto-thresholds the red channel, then sets the green channel to the same threshold level as the red channel before continuing my analysis. What is the best way to do this?
It is not an option to auto-threshold both because they are not always the same and I need to green channel to be set to defualt red channel level. Here is a small example of what thresholding the red channel looks like:
run("Invert");
run("Split Channels");
selectImage(title+" (red)");
setAutoThreshold("Default");
//run("Threshold...");
run("Convert to Mask");
How do i proceed to set the green channel to what the red has just been Auto'd to?
Thanks!!!
Joe
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