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Hello,
I am trying to use the ImageJ built-in threshold process in our Linux environment which have NO graphic. The macro is below:
print('This is the macro_Tomo_etape2_v1');
open("$FilePath/B10_1_clearoutside_1.tif");
setAutoThreshold("Default");
run("Threshold...");
setThreshold(0, 30000);
run("Convert to Mask", "method=Default background=Light");
run("Close");
saveAs("Tiff", "$FilePath/B10_1_clearoutside_1_thresholded.tif");
close();
However I have always the error shown below:
No GUI detected. Falling back to headless mode.
No GUI detected. Falling back to headless mode.
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option PermSize=128m; support was removed in 8.0
Java HotSpot(TM) 64-Bit Server VM warning: Using incremental CMS is deprecated and will likely be removed in a future release
I have tried the headless mode in ImageJ and even the Xvfb but nothing works.
Could you please help me. Thankyou in advance.
PS: Sorry for my bad English
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