Warning/Error using Fiji on linux

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Warning/Error using Fiji on linux

BenTupper
Hello,

I'm learning to use Fiji in a headless CentOS 6 environment.  I first updated fiji using...

$ fiji --update update


I have a simple macro, '~/hello.ijm', adapted from this one... http://rsb.info.nih.gov/ij/macros/SaveTextFileDemo.txt

//
//START ~/hello.ijm
//
f = File.open("/home/btupper/hello.txt");
// use d2s() function (double to string) to specify decimal places
for (i=0; i<=2*PI; i+=0.01)
    print(f, d2s(i,6) + "  \t" + d2s(sin(i),6) + " \t" + d2s(cos(i),6));
//
//FINISH ~/hello.ijm
//

I then run the macro from the command line. The macro successfully creates and populates the '~/hello.txt' file.  However, I get log4j warnings and an error as shown below.  (Note, I have pasted in below the entire output when I set the --debug flag.)


[btupper@fcm-flow ~]$ fiji --headless -macro /home/btupper/hello.ijm
log4j:WARN No appenders could be found for logger (org.bushe.swing.event.EventService).
log4j:WARN Please initialize the log4j system properly.
log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info.
[ERROR] Skipping unsupported option -port7

Here is a bit more info about the Fiji installation.  

[btupper@fcm-flow ~]$ fiji --print-java-home
/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24/
[btupper@fcm-flow ~]$ fiji --print-ij-dir
/opt/Fiji.app


Do I need to worry about the warnings?  I can't locate any instructions for initializing log4j on the Fiji website.  I have found these 3rd party instructions [ http://www.javabeat.net/baisc-steps-to-configure-log4j-using-xml-and-properties-file/ ] but I have no idea if the are appropriate for what Fiji requires.  

I also have no idea how to resolve the error.  

Any suggestions?

Thanks!
Ben


P.S. Below is the command and output with --debug set

[btupper@fcm-flow ~]$ fiji --debug --headless -macro /home/btupper/hello.ijm
Available RAM: 3727MB, using 3/4 of that: 2796MB
JRE not found in '/opt/Fiji.app/jre'
JAVA_HOME contains a JRE: '/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre'
Re-executing with correct library lookup path (/opt/Fiji.app/lib/linux64:/opt/Fiji.app/mm/linux64)
Available RAM: 3727MB, using 3/4 of that: 2796MB
JRE not found in '/opt/Fiji.app/jre'
JAVA_HOME contains a JRE: '/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre'
Appending missing -batch flag for headless operation.
java -Dpython.cachedir.skip=true -Dplugins.dir=/opt/Fiji.app -Xmx2796m -Djava.awt.headless=true -Dapple.awt.UIElement=true -Xincgc -XX:PermSize=128m -Dsun.java.command=ImageJ -Djava.class.path=/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar -Dimagej.dir=/opt/Fiji.app -Dij.dir=/opt/Fiji.app -Dfiji.dir=/opt/Fiji.app -Dfiji.defaultLibPath=lib/amd64/server/libjvm.so -Dfiji.executable=/opt/Fiji.app/fiji-linux64 -Dij.executable=/opt/Fiji.app/fiji-linux64 -Djava.library.path=/opt/Fiji.app/lib/linux64:/opt/Fiji.app/mm/linux64 -Dij.debug=true -Dscijava.log.level=debug net.imagej.launcher.ClassLauncher -classpath /opt/Fiji.app/jars/ij-1.49m.jar fiji.Main -port7 -macro /home/btupper/hello.ijm -batch
Using JAVA_HOME /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre
Opening Java library /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre/lib/amd64/server/libjvm.so
Adding option: -Djava.home=/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24/
Launching main class fiji.Main with parameters [-port7, -macro, /home/btupper/hello.ijm, -batch]
Class loader = sun.misc.Launcher$AppClassLoader@b92d342
ij1.plugin.dirs: null
$HOME/.plugins: /home/btupper/.plugins does not exist
Launching main class net.imagej.Main with parameters [-port7, -macro, /home/btupper/hello.ijm, -batch]
Class loader = sun.misc.Launcher$AppClassLoader@b92d342
Checking class loader: sun.misc.Launcher$AppClassLoader@b92d342
Checking URL: file:/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar
Not Eclipse because first entry is: file:/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar
[DEBUG] Creating service: org.scijava.event.DefaultEventService
[DEBUG] Creating service: org.scijava.log.StderrLogService
[DEBUG] Created service 'org.scijava.log.StderrLogService' in 2 ms
[DEBUG] Creating service: org.scijava.thread.DefaultThreadService
[DEBUG] Created service 'org.scijava.thread.DefaultThreadService' in 1 ms
[DEBUG] Created service 'org.scijava.event.DefaultEventService' in 47 ms
[DEBUG] Creating service: org.scijava.script.DefaultScriptService
[DEBUG] Creating service: org.scijava.plugin.DefaultPluginService
[INFO] Found 777 plugins.
[DEBUG] - class='org.scijava.module.process.DebugPreprocessor', priority=Infinity, enabled=true, pluginType=PreprocessorPlugin
[DEBUG] - class='org.scijava.module.process.DebugPostprocessor', priority=Infinity, enabled=true, pluginType=PostprocessorPlugin
[DEBUG] - class='net.imagej.plugins.tools.KonamiHandler', name='Konami', priority=Infinity, enabled=true, pluginType=Tool
[DEBUG] - class='org.scijava.event.DefaultEventService', priority=100000.0, enabled=true, pluginType=Service
[DEBUG] - class='org.scijava.module.process.ValidityPreprocessor', priority=10001.0, enabled=true, pluginType=PreprocessorPlugin
[DEBUG] - class='org.scijava.ui.UIPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
[DEBUG] - class='org.scijava.display.ActiveDisplayPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
[DEBUG] - class='org.scijava.module.process.GatewayPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
[DEBUG] - class='org.scijava.module.process.ServicePreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
[DEBUG] - class='net.imagej.display.ActiveImagePreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
[DEBUG] - class='net.imagej.legacy.plugin.ActiveImagePlusPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
[DEBUG] - class='io.scif.bf.BioFormatsFormat', name='Bio-Formats Compatibility Format', priority=10000.0, enabled=true, pluginType=Format
[DEBUG] - class='net.imagej.ops.slicer.SlicewiseRAI2RAI', name='slicemapper', priority=10000.0, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ops.arithmetic.add.parallel.AddConstantToArrayDoubleImageP', name='add', priority=111.0, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ops.arithmetic.add.parallel.AddConstantToArrayByteImageP', name='add', priority=110.0, enabled=true, pluginType=Op
[DEBUG] - class='io.scif.ome.translators.OMETIFFTranslator$OMEtoOMETIFFTranslator', priority=101.0, enabled=true, pluginType=ToOMETranslator
[DEBUG] - class='io.scif.ome.translators.OMETIFFTranslator$OMETIFFtoOMETranslator', priority=101.0, enabled=true, pluginType=FromOMETranslator
[DEBUG] - class='io.scif.bf.ome.BioFormatsTranslator$BioFormatsOMETranslator', priority=101.0, enabled=true, pluginType=ToOMETranslator
[DEBUG] - class='net.imagej.app.ToplevelImageJApp', name='ImageJ', priority=101.0, enabled=true, pluginType=App
[DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToArrayDoubleImage', name='add', priority=101.0, enabled=true, pluginType=Op
[DEBUG] - class='org.scijava.ui.awt.widget.AWTMessageWidget', priority=100.0, enabled=true, pluginType=InputWidget
[DEBUG] - class='org.scijava.module.process.InitPreprocessor', priority=100.0, enabled=true, pluginType=PreprocessorPlugin
[DEBUG] - class='org.scijava.script.DefaultScriptService', priority=100.0, enabled=true, pluginType=Service
[DEBUG] - class='net.imagej.lut.DefaultLUTService', priority=100.0, enabled=true, pluginType=Service
[DEBUG] - class='net.imagej.legacy.display.LegacyImageDisplayViewer', priority=100.0, enabled=true, pluginType=DisplayViewer
[DEBUG] - class='net.imagej.legacy.display.LegacyTextDisplayViewer', priority=100.0, enabled=true, pluginType=DisplayViewer
[DEBUG] - class='org.scijava.ui.swing.widget.SwingMessageWidget', priority=100.0, enabled=true, pluginType=InputWidget
[DEBUG] - class='net.imagej.ui.swing.overlay.RectangleJHotDrawAdapter', priority=100.0, enabled=true, pluginType=JHotDrawAdapter
[DEBUG] - class='net.imagej.ui.swing.overlay.ThresholdJHotDrawAdapter', priority=100.0, enabled=true, pluginType=JHotDrawAdapter
[DEBUG] - class='io.scif.ome.translators.BMPTranslator$BMPOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
[DEBUG] - class='io.scif.ome.translators.MicromanagerTranslator$MicromanagerOMETranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator
[DEBUG] - class='io.scif.ome.translators.OBFTranslator$OBFOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
[DEBUG] - class='io.scif.ome.translators.TIFFTranslator$TIFFOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
[DEBUG] - class='io.scif.ome.translators.TIFFTranslator$OMETIFFTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator
[DEBUG] - class='io.scif.ome.translators.APNGTranslator$OMEAPNGTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator
[DEBUG] - class='io.scif.ome.translators.APNGTranslator$APNGOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
[DEBUG] - class='io.scif.ome.translators.ICSTranslator$OMEICSTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator
[DEBUG] - class='io.scif.ome.translators.ICSTranslator$ICSOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
[DEBUG] - class='io.scif.ome.translators.DICOMTranslator$DICOMOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
[DEBUG] - class='io.scif.ome.translators.NRRDTranslator$NRRDOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
[DEBUG] - class='io.scif.ome.translators.EPSTranslator$OMEEPSTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator
[DEBUG] - class='net.imagej.operator.OpAdd', name='Add', priority=100.0, enabled=true, pluginType=CalculatorOp
[DEBUG] - class='net.imagej.app.ImageJApp', name='ImageJ', priority=100.0, enabled=true, pluginType=App
[DEBUG] - class='net.imagej.ui.swing.tools.SwingRectangleTool', name='Rectangle', description='Rectangular overlays', iconPath='/icons/tools/rectangle.png', priority=100.0, enabled=true, pluginType=Tool
[DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToArrayByteImage', name='add', priority=100.0, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$AddOp', name='add', priority=100.0, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$DivideOp', name='divide', priority=100.0, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.legacy.ui.LegacyUI', name='legacy', priority=100.0, enabled=true, pluginType=UserInterface
[DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$MultiplyOp', name='multiply', priority=100.0, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$SubtractOp', name='subtract', priority=100.0, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ui.swing.overlay.EllipseJHotDrawAdapter', priority=99.0, enabled=true, pluginType=JHotDrawAdapter
[DEBUG] - class='net.imagej.ui.swing.tools.SwingEllipseTool', name='Oval', description='Oval selections', iconPath='/icons/tools/oval.png', priority=99.0, enabled=true, pluginType=Tool
[DEBUG] - class='net.imagej.operator.OpSubtract', name='Subtract', priority=99.0, enabled=true, pluginType=CalculatorOp
[DEBUG] - class='net.imagej.ui.swing.overlay.GeneralPathJHotDrawAdapter', priority=98.5, enabled=true, pluginType=JHotDrawAdapter
[DEBUG] - class='net.imagej.ui.swing.overlay.PolygonJHotDrawAdapter', priority=98.0, enabled=true, pluginType=JHotDrawAdapter
[DEBUG] - class='net.imagej.operator.OpMultiply', name='Multiply', priority=98.0, enabled=true, pluginType=CalculatorOp
[DEBUG] - class='net.imagej.ui.swing.tools.SwingPolygonTool', name='Polygon', description='Polygon overlays', iconPath='/icons/tools/polygon.png', priority=98.0, enabled=true, pluginType=Tool
[DEBUG] - class='net.imagej.ui.swing.overlay.LineJHotDrawAdapter', priority=97.0, enabled=true, pluginType=JHotDrawAdapter
[DEBUG] - class='net.imagej.operator.OpDivide', name='Divide', priority=97.0, enabled=true, pluginType=CalculatorOp
[DEBUG] - class='net.imagej.ui.swing.tools.SwingLineTool', name='Line', description='Straight line overlays', iconPath='/icons/tools/line.png', priority=97.0, enabled=true, pluginType=Tool
[DEBUG] - class='net.imagej.ui.swing.overlay.PolylineJHotDrawAdapter', priority=96.0, enabled=true, pluginType=JHotDrawAdapter
[DEBUG] - class='net.imagej.operator.OpAnd', name='AND', priority=96.0, enabled=true, pluginType=CalculatorOp
[DEBUG] - class='net.imagej.ui.swing.tools.SwingPolylineTool', name='Polyline', description='Polyline overlays', iconPath='/icons/tools/polyline.png', priority=96.0, enabled=true, pluginType=Tool
[DEBUG] - class='net.imagej.ui.swing.overlay.AngleJHotDrawAdapter', priority=95.0, enabled=true, pluginType=JHotDrawAdapter
[DEBUG] - class='net.imagej.ui.swing.tools.SwingAngleTool', name='Angle', description='Angle overlays', iconPath='/icons/tools/angle.png', priority=95.0, enabled=true, pluginType=Tool
[DEBUG] - class='net.imagej.operator.OpOr', name='OR', priority=95.0, enabled=true, pluginType=CalculatorOp
[DEBUG] - class='net.imagej.ui.swing.overlay.PointJHotDrawOverlay', priority=94.0, enabled=true, pluginType=JHotDrawAdapter
[DEBUG] - class='net.imagej.ui.swing.tools.SwingPointTool', name='Point', description='Point overlays', iconPath='/icons/tools/point.png', priority=94.0, enabled=true, pluginType=Tool
[DEBUG] - class='net.imagej.operator.OpXor', name='XOR', priority=94.0, enabled=true, pluginType=CalculatorOp
[DEBUG] - class='net.imagej.operator.OpMin', name='Min', priority=93.0, enabled=true, pluginType=CalculatorOp
[DEBUG] - class='net.imagej.operator.OpMax', name='Max', priority=92.0, enabled=true, pluginType=CalculatorOp
[DEBUG] - class='net.imagej.operator.OpAverage', name='Average', priority=91.0, enabled=true, pluginType=CalculatorOp
[DEBUG] - class='net.imagej.operator.OpDifference', name='Difference', priority=90.0, enabled=true, pluginType=CalculatorOp
[DEBUG] - class='net.imagej.operator.OpCopy', name='Copy', priority=89.0, enabled=true, pluginType=CalculatorOp
[DEBUG] - class='net.imagej.operator.OpTransparentZero', name='Transparent-zero', priority=88.0, enabled=true, pluginType=CalculatorOp
[DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.FastLAPTrackerFactory', priority=10.0, enabled=true, pluginType=SpotTrackerFactory
[DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.SimpleFastLAPTrackerFactory', priority=10.0, enabled=true, pluginType=SpotTrackerFactory
[DEBUG] - class='net.imagej.legacy.DefaultLegacyService', priority=1.0, enabled=true, pluginType=Service
[DEBUG] - class='org.scijava.ui.swing.widget.SwingChoiceRadioWidget', priority=1.0, enabled=true, pluginType=InputWidget
[DEBUG] - class='net.imagej.ops.onthefly.JavassistOptimizer', priority=1.0, enabled=true, pluginType=Optimizer
[DEBUG] - class='fiji.plugin.trackmate.visualization.threedviewer.SpotDisplayer3DFactory', priority=1.0, enabled=true, pluginType=ViewFactory
[DEBUG] - class='fiji.plugin.trackmate.tracking.kdtree.NearestNeighborTrackerFactory', priority=1.0, enabled=true, pluginType=SpotTrackerFactory
[DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotContrastAndSNRAnalyzerFactory', priority=1.0, enabled=true, pluginType=SpotAnalyzerFactory
[DEBUG] - class='net.imagej.ops.invert.InvertII', name='invert', priority=1.0, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ops.generated.AddConstantToDouble', name='add', priority=0.6, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ops.generated.AddConstantToLong', name='add', priority=0.5, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ops.generated.AddConstantToFloat', name='add', priority=0.4, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ops.generated.AddConstantToInteger', name='add', priority=0.3, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ops.generated.AddConstantToShort', name='add', priority=0.2, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ops.generated.AddConstantToByte', name='add', priority=0.1, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.plugins.commands.assign.AndDataValuesWith', menu='Process > Math > AND...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.app.AboutImageJ', label='About ImageJ...', menu='Help > About ImageJ...', iconPath='/icons/commands/information.png', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.assign.AbsDataValues', menu='Process > Math > Abs...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionAdaptiveMedian', menu='Process > Noise > Noise Reduction > Adaptive Median', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.restructure.AddAxis', menu='Image > Axes > Add Axis...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.restructure.AddData', menu='Image > Data > Add Data...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.overlay.AddImage', menu='Image > Overlay > Add Image', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.assign.AddNoiseToDataValues', menu='Process > Noise > Add Noise...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.assign.AddSpecifiedNoiseToDataValues', menu='Process > Noise > Add Specified Noise...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.assign.AddToDataValues', menu='Process > Math > Add...', iconPath='/icons/commands/sum.png', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionAlphaTrimmedMean', menu='Process > Noise > Noise Reduction > Alpha Trimmed Mean', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.animation.AnimationOptions', menu='Image > Animation > Animation Options...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.options.OptionsAppearance', menu='Edit > Options > Appearance...', priority=0.0, enabled=true, pluginType=OptionsPlugin
[DEBUG] - class='net.imagej.ops.commands.threshold.GlobalThresholder', menu='Image > Threshold > Apply Threshold', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.options.OptionsArrowTool', menu='Edit > Options > Arrow Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin
[DEBUG] - class='net.imagej.plugins.commands.display.AutoContrast', menu='Image > Adjust > Auto-Contrast', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.axispos.AxisPositionBackward', menu='Image > Axes > Axis Position Backward', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.axispos.AxisPositionForward', menu='Image > Axes > Axis Position Forward', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.misc.Benchmark', menu='Plugins > Utilities > Benchmark', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.imglib.Binner', menu='Image > Transform > Bin...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.binary.Binarize', menu='Process > Binary > Binarize...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.display.interactive.BrightnessContrast', menu='Image > Adjust > Brightness/Contrast...', iconPath='/icons/commands/contrast.png', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.debug.ButtonDemo', menu='Plugins > Sandbox > Button Demo', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.display.CaptureImage', menu='Plugins > Utilities > Capture Image', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.display.CaptureScreen', menu='Plugins > Utilities > Capture Screen', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.typechange.TypeChanger', menu='Image > Type > Change...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.display.ChannelsTool', menu='Image > Color > Channels Tool...', iconPath='/icons/commands/color_wheel.png', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.options.OptionsChannels', menu='Edit > Options > Channels...', priority=0.0, enabled=true, pluginType=OptionsPlugin
[DEBUG] - class='org.scijava.plugins.commands.io.ClearRecent', label='Clear Recent', menu='File > Open Recent > Clear List', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='org.scijava.plugins.commands.display.Close', menu='File > Close', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.binary.CloseBinaryImage', menu='Process > Binary > Close', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='org.scijava.plugins.commands.display.CloseAll', menu='File > Close All', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.options.OptionsCompatibility', menu='Edit > Options > Compatibility...', priority=0.0, enabled=true, pluginType=OptionsPlugin
[DEBUG] - class='net.imagej.options.OptionsCompiler', menu='Edit > Options > Compiler...', priority=0.0, enabled=true, pluginType=OptionsPlugin
[DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionContraharmonicMean', menu='Process > Noise > Noise Reduction > Contraharmonic Mean', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.options.OptionsConversions', menu='Edit > Options > Conversions...', priority=0.0, enabled=true, pluginType=OptionsPlugin
[DEBUG] - class='net.imagej.ops.commands.convert.ConvertImgPlus', menu='Image > Convert', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.ops.commands.convolve.Convolve', menu='Image > Convolve', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.app.CopyToSystem', menu='Edit > Copy To System', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.binary.CreateMask', menu='Process > Binary > Create Mask...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.app.CreateShortcut', menu='Plugins > Shortcuts > Create Shortcut...', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.imglib.CropImage', menu='Image > Crop', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.options.OptionsDicom', menu='Edit > Options > DICOM...', priority=0.0, enabled=true, pluginType=OptionsPlugin
[DEBUG] - class='net.imagej.options.OptionsOverlay', label='Default Overlay Settings', menu='Image > Overlay > Overlay Options...', priority=0.0, enabled=true, pluginType=OptionsPlugin
[DEBUG] - class='net.imagej.plugins.commands.restructure.DeleteAxis', menu='Image > Axes > Delete Axis...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.restructure.DeleteData', menu='Image > Data > Delete Data...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.display.interactive.DeleteThreshold', menu='Image > Adjust > Delete Threshold', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.display.DeselectOverlays', menu='Edit > Selection > Deselect Overlays', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='org.scijava.ui.swing.commands.DialogPromptDemo', menu='Plugins > Sandbox > Dialog Prompt Demo', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.binary.DilateBinaryImage', menu='Process > Binary > Dilate', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.assign.DivideDataValuesBy', menu='Process > Math > Divide...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='org.scijava.plugins.commands.debug.DumpStack', menu='Plugins > Debug > Dump Stack', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.imglib.DuplicateImage', menu='Image > Duplicate', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.imglib.DuplicateImageContext', menu='Duplicate...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsEast', menu='Process > Shadows > East', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.restructure.EditAxes', menu='Image > Axes > Edit Axes...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.assign.EquationDataValues', menu='Process > Math > Equation...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.binary.ErodeBinaryImage', menu='Process > Binary > Erode', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.assign.ExpDataValues', menu='Process > Math > Exp...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.assign.FillDataValues', menu='Edit > Fill', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='org.scijava.ui.swing.commands.CommandFinder', menu='Plugins > Utilities > Find Commands...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.neigh.FindEdges', menu='Process > Find Edges', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.display.Flatten', menu='Image > Overlay > Flatten', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.restructure.FlipAxis', menu='Image > Transform > Flip Axis', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.rotate.FlipHorizontally', menu='Image > Transform > Flip Horizontally', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.rotate.FlipVertically', menu='Image > Transform > Flip Vertically', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.tools.FloodFillToolConfig', label='Flood Fill Tool', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.options.OptionsFont', menu='Edit > Options > Fonts...', priority=0.0, enabled=true, pluginType=OptionsPlugin
[DEBUG] - class='net.imagej.plugins.commands.overlay.FromOverlayManager', menu='Image > Overlay > From Overlay Manager', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.assign.GammaDataValues', menu='Process > Math > Gamma...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.imglib.GaussianBlur', menu='Process > Filters > Gaussian Blur...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionGeometricMean', menu='Process > Noise > Noise Reduction > Geometric Mean', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionHarmonicMean', menu='Process > Noise > Noise Reduction > Harmonic Mean', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.display.HistogramPlot', menu='Analyze > Histogram Plot', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.calculator.ImageCalculator', menu='Process > Image Calculator...', iconPath='/icons/commands/calculator.png', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.io.OpenDataset', menu='File > Import > Image... ', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.io.SaveDataset', menu='File > Export > Image...  ', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.app.ImageJWebsite', menu='Help > ImageJ Website...', iconPath='/icons/commands/world_link.png', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.legacy.ImageJ2Options', label='ImageJ2 Options', menu='Edit > Options > ImageJ2...', priority=0.0, enabled=true, pluginType=OptionsPlugin
[DEBUG] - class='net.imagej.options.OptionsInputOutput', menu='Edit > Options > Input/Output...', priority=0.0, enabled=true, pluginType=OptionsPlugin
[DEBUG] - class='net.imagej.plugins.commands.debug.InspectImg', menu='Plugins > Debug > Inspect Image', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='org.scijava.ui.swing.commands.InspectObjects', menu='Plugins > Debug > Inspect Objects', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='org.scijava.plugins.commands.debug.InvalidCommandDemo$InvalidCommand', menu='Plugins > Debug > Invalid Command', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.assign.InvertDataValues', menu='Edit > Invert...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.lut.LUTSelector', label='LUT Selector', menu='Image > Lookup Tables > Select...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.overlay.OverlayLabels', menu='Image > Overlay > Labels...', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.options.OptionsLineWidth', menu='Edit > Options > Line Width...', priority=0.0, enabled=true, pluginType=OptionsPlugin
[DEBUG] - class='net.imagej.plugins.commands.app.ListShortcuts', menu='Plugins > Shortcuts > List Shortcuts...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.assign.LogDataValues', menu='Process > Math > Log...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='org.scijava.ui.swing.options.OptionsLookAndFeel', menu='Edit > Options > Look and Feel...', priority=0.0, enabled=true, pluginType=OptionsPlugin
[DEBUG] - class='net.imagej.plugins.commands.binary.MakeBinary', menu='Process > Binary > Make Binary...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.overlay.ConvertToMask', menu='Process > Binary > Make Mask Overlay...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.debug.MandelbrotSetImage', menu='Plugins > Sandbox > Mandelbrot Set', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.assign.MaxDataValues', menu='Process > Math > Max...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMax', menu='Process > Noise > Noise Reduction > Maximum', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMean', menu='Process > Noise > Noise Reduction > Mean', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.debug.MeasurementDemo', menu='Plugins > Sandbox > Measurement Demo', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMedian', menu='Process > Noise > Noise Reduction > Median', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.options.OptionsMemoryAndThreads', menu='Edit > Options > Memory & Threads...', priority=0.0, enabled=true, pluginType=OptionsPlugin
[DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMidpoint', menu='Process > Noise > Noise Reduction > Midpoint', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.assign.MinDataValues', menu='Process > Math > Min...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMin', menu='Process > Noise > Noise Reduction > Minimum', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.options.OptionsMisc', menu='Edit > Options > Misc...', priority=0.0, enabled=true, pluginType=OptionsPlugin
[DEBUG] - class='net.imagej.legacy.plugin.MixedWorldCommand', menu='Plugins > Sandbox > Mixed World Command', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.debug.MultidimImage', menu='Plugins > Sandbox > Multidimensional Test Image', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.assign.MultiplyDataValuesBy', menu='Process > Math > Multiply...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.imglib.NanBackground', menu='Process > Math > NaN Background', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.io.NewImage', label='New Image...', menu='File > New > Image...', iconPath='/icons/commands/picture.png', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNorth', menu='Process > Shadows > North', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNortheast', menu='Process > Shadows > Northeast', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNorthwest', menu='Process > Shadows > Northwest', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.assign.OrDataValuesWith', menu='Process > Math > OR...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.binary.OpenBinaryImage', menu='Process > Binary > Open', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='org.scijava.plugins.commands.io.OpenFile', menu='File > Open...', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomOriginalScale', menu='Image > Zoom > Original Scale', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.display.interactive.OrthogonalViews', menu='Image > Stacks > Orthogonal Views', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.ui.swing.commands.OverlayManager', menu='Image > Overlay > Overlay Manager', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.commands.overlay.OverlayProperties', label='Overlay Properties...', menu='Image > Overlay > Properties...', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='net.imagej.plugins.tools.PaintBrushToolConfig', label='Paintbrush Tool', priority=0.0, enabled=true, pluginType=Command
[DEBUG] - class='org.scijava.plugins.commands.debug.ParamAssignOrder', menu='Plugins > Sandbox > Parameter Assignment Order', priority=0.0, enabled=true, pluginType=Command
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[DEBUG] - class='fiji.patches.OldLegacyEditor', priority=0.0, enabled=true, pluginType=LegacyEditor
[DEBUG] - class='fiji.patches.OldAppConfiguration', priority=0.0, enabled=true, pluginType=LegacyAppConfiguration
[DEBUG] - class='net.imglib2.meta.units.DefaultUnitService', priority=0.0, enabled=true, pluginType=Service
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[DEBUG] - class='org.scijava.ui.awt.widget.AWTToggleWidget', priority=0.0, enabled=true, pluginType=InputWidget
[DEBUG] - class='org.scijava.ui.awt.widget.AWTChoiceWidget', priority=0.0, enabled=true, pluginType=InputWidget
[DEBUG] - class='org.scijava.ui.awt.widget.AWTNumberWidget', priority=0.0, enabled=true, pluginType=InputWidget
[DEBUG] - class='org.scijava.ui.awt.widget.AWTTextWidget', priority=0.0, enabled=true, pluginType=InputWidget
[DEBUG] - class='org.scijava.ui.awt.widget.AWTFileWidget', priority=0.0, enabled=true, pluginType=InputWidget
[DEBUG] - class='org.scijava.ui.awt.widget.AWTButtonWidget', priority=0.0, enabled=true, pluginType=InputWidget
[DEBUG] - class='net.imagej.plugins.uploaders.ssh.SSHFileUploader', priority=0.0, enabled=true, pluginType=Uploader
[DEBUG] - class='net.imagej.plugins.uploaders.ssh.SFTPFileUploader', priority=0.0, enabled=true, pluginType=Uploader
[DEBUG] - class='net.imagej.plugins.uploaders.webdav.WebDAVUploader', priority=0.0, enabled=true, pluginType=Uploader
[DEBUG] - class='org.scijava.plugins.text.markdown.MarkdownTextFormat', priority=0.0, enabled=true, pluginType=TextFormat
[DEBUG] - class='net.imagej.ui.awt.AWTRenderingService', priority=0.0, enabled=true, pluginType=Service
[DEBUG] - class='net.imagej.ui.awt.AWTScreenCaptureService', priority=0.0, enabled=true, pluginType=Service
[DEBUG] - class='org.scijava.object.DefaultObjectService', priority=0.0, enabled=true, pluginType=Service
[DEBUG] - class='org.scijava.convert.DefaultConverter', priority=0.0, enabled=true, pluginType=Converter
[DEBUG] - class='org.scijava.convert.DefaultConvertService', priority=0.0, enabled=true, pluginType=Service
[DEBUG] - class='org.scijava.input.DefaultInputService', priority=0.0, enabled=true, pluginType=Service
[DEBUG] - class='org.scijava.ui.DefaultUIService', priority=0.0, enabled=true, pluginType=Service
[DEBUG] - class='org.scijava.ui.dnd.DefaultDragAndDropService', priority=0.0, enabled=true, pluginType=Service
[DEBUG] - class='org.scijava.ui.dnd.ListDragAndDropHandler', priority=0.0, enabled=true, pluginType=DragAndDropHandler
[DEBUG] - class='org.scijava.ui.dnd.ScriptFileDragAndDropHandler', priority=0.0, enabled=true, pluginType=DragAndDropHandler
[DEBUG] - class='org.scijava.ui.console.UIArgument', priority=0.0, enabled=true, pluginType=ConsoleArgument
[DEBUG] - class='org.scijava.plugin.DefaultPluginService', priority=0.0, enabled=true, pluginType=Service
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[DEBUG] - class='org.scijava.prefs.DefaultPrefService', priority=0.0, enabled=true, pluginType=Service
[DEBUG] - class='org.scijava.io.DefaultRecentFileService', priority=0.0, enabled=true, pluginType=Service
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[DEBUG] - class='org.scijava.console.DefaultConsoleService', priority=0.0, enabled=true, pluginType=Service
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[DEBUG] - class='net.imagej.display.DefaultImageDisplayService', priority=0.0, enabled=true, pluginType=Service
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[DEBUG] - class='net.imagej.display.DefaultWindowService', priority=0.0, enabled=true, pluginType=Service
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[DEBUG] - class='net.imagej.types.DataType32BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType
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[DEBUG] - class='net.imagej.types.DefaultDataTypeService', priority=0.0, enabled=true, pluginType=Service
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[DEBUG] - class='net.imagej.ui.DefaultImageJUIService', priority=0.0, enabled=true, pluginType=Service
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[DEBUG] - class='io.scif.services.JAIIIOServiceImpl', priority=0.0, enabled=true, pluginType=Service
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[DEBUG] - class='net.imagej.updater.DefaultUploaderService', priority=0.0, enabled=true, pluginType=Service
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[DEBUG] - class='net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor', priority=0.0, enabled=true, pluginType=Service
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[DEBUG] - class='fiji.plugin.trackmate.action.ISBIChallengeExporter$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
[DEBUG] - class='fiji.plugin.trackmate.action.MergeFileAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
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[DEBUG] - class='fiji.plugin.trackmate.features.track.TrackBranchingAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer
[DEBUG] - class='fiji.plugin.trackmate.action.PlotNSpotsVsTimeAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
[DEBUG] - class='fiji.plugin.trackmate.action.ExportStatsToIJAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
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[DEBUG] - class='fiji.plugin.trackmate.action.ExportTracksToXML$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
[DEBUG] - class='fiji.plugin.trackmate.action.LinkNew3DViewerAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
[DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.SimpleLAPTrackerFactory', priority=0.0, enabled=true, pluginType=SpotTrackerFactory
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[DEBUG] - class='fiji.plugin.trackmate.action.IcyTrackExporter$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
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[DEBUG] - class='fiji.plugin.trackmate.tracking.sparselap.SimpleSparseLAPTrackerFactory', priority=0.0, enabled=true, pluginType=SpotTrackerFactory
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[DEBUG] - class='net.imagej.ui.swing.updater.ImageJUpdater', menu='Help > Update...', priority=0.0, enabled=true, pluginType=UpdaterUI
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[DEBUG] - class='net.imagej.options.OptionsWandTool', menu='Edit > Options > Wand Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin
[DEBUG] - class='org.scijava.ui.swing.commands.WatchEvents', menu='Plugins > Debug > Watch Events', priority=0.0, enabled=true, pluginType=Command
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[DEBUG] - class='net.imagej.io.DatasetIOPlugin', priority=-100.0, enabled=true, pluginType=IOPlugin
[DEBUG] - class='io.scif.formats.APNGFormat$APNGTranslator', priority=-100.0, enabled=true, pluginType=Translator
[DEBUG] - class='io.scif.formats.qt.NativeQTFormat$NativeQTTranslator', priority=-100.0, enabled=true, pluginType=Translator
[DEBUG] - class='io.scif.formats.FakeFormat$FakeTranslator', priority=-100.0, enabled=true, pluginType=Translator
[DEBUG] - class='io.scif.formats.MicromanagerFormat$MicromanagerTranslator', priority=-100.0, enabled=true, pluginType=Translator
[DEBUG] - class='io.scif.services.DefaultInitializeService', priority=-100.0, enabled=true, pluginType=Service
[DEBUG] - class='io.scif.formats.AVIFormat$Translator', priority=-100.0, enabled=true, pluginType=Translator
[DEBUG] - class='io.scif.formats.ICSFormat$ICSTranslator', priority=-100.0, enabled=true, pluginType=Translator
[DEBUG] - class='io.scif.formats.EPSFormat$EPSTranslator', priority=-100.0, enabled=true, pluginType=Translator
[DEBUG] - class='io.scif.formats.ImageIOFormat$ImageIOTranslator', priority=-100.0, enabled=true, pluginType=Translator
[DEBUG] - class='io.scif.formats.qt.LegacyQTFormat$LegacyQTTranslator', priority=-100.0, enabled=true, pluginType=Translator
[DEBUG] - class='net.imagej.legacy.plugin.DefaultLegacyOpener', priority=-100.0, enabled=true, pluginType=LegacyOpener
[DEBUG] - class='net.imagej.legacy.plugin.DefaultLegacyEditor', priority=-100.0, enabled=true, pluginType=LegacyEditor
[DEBUG] - class='org.scijava.plugins.scripting.java.MainJavaRunner', priority=-100.0, enabled=true, pluginType=JavaRunner
[DEBUG] - class='io.scif.ome.formats.OMEXMLFormat$OMEXMLTranslator', priority=-100.0, enabled=true, pluginType=Translator
[DEBUG] - class='io.scif.formats.qt.LegacyQTFormat', name='QuickTime', priority=-100.0, enabled=true, pluginType=Format
[DEBUG] - class='org.scijava.app.SciJavaApp', name='SciJava', priority=-100.0, enabled=true, pluginType=App
[DEBUG] - class='io.scif.formats.JPEGTileFormat', name='Tile JPEG', priority=-100.0, enabled=true, pluginType=Format
[DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToNumericType', name='add', priority=-100.0, enabled=true, pluginType=Op
[DEBUG] - class='org.scijava.ui.awt.AWTUI', name='awt', priority=-100.0, enabled=true, pluginType=UserInterface
[DEBUG] - class='net.imagej.ops.crop.CropRAI', name='crop', aliases='slice', priority=-100.0, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ops.map.MapII2RAI', name='map', priority=-100.0, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ops.map.MapRAI2III', name='map', priority=-100.0, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ops.map.MapI', name='map', priority=-100.0, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ops.neighborhood.MapNeighborhood', name='map', priority=-100.0, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ops.statistics.MaxRealType', name='max', priority=-100.0, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ops.statistics.MeanRealType', name='mean', priority=-100.0, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ops.statistics.MedianRealType', name='median', priority=-100.0, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ops.statistics.MinRealType', name='min', priority=-100.0, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ops.project.ProjectRAI2II', name='project', priority=-100.0, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ops.misc.SizeIterableInterval', name='size', priority=-100.0, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ops.statistics.StdDevRealType', name='stddev', priority=-100.0, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ops.statistics.SumRealType', name='sum', priority=-100.0, enabled=true, pluginType=Op
[DEBUG] - class='org.scijava.ui.swing.mdi.SwingMdiUI', name='swing-mdi', priority=-100.0, enabled=true, pluginType=UserInterface
[DEBUG] - class='net.imagej.ops.statistics.VarianceRealType', name='variance', priority=-100.0, enabled=true, pluginType=Op
[DEBUG] - class='org.scijava.text.io.TextIOPlugin', priority=-101.0, enabled=true, pluginType=IOPlugin
[DEBUG] - class='net.imagej.ops.map.MapI2I', name='map', priority=-101.0, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.plugins.tools.WandTool', name='Wand', description='Wand (tracing) tool', iconPath='/icons/tools/wand.png', priority=-110.0, enabled=false, pluginType=Tool
[DEBUG] - class='net.imagej.ui.swing.tools.SwingTextTool', name='Text', description='Text tool', iconPath='/icons/tools/text.png', priority=-115.0, enabled=false, pluginType=Tool
[DEBUG] - class='net.imagej.plugins.tools.ZoomTool', name='Zoom', description='Magnifying glass (or use "+" and "-" keys)', iconPath='/icons/tools/zoom.png', priority=-200.0, enabled=true, pluginType=Tool
[DEBUG] - class='net.imagej.plugins.tools.PanTool', name='Pan', description='Scrolling tool (or press space bar and drag)', iconPath='/icons/tools/pan.png', priority=-201.0, enabled=true, pluginType=Tool
[DEBUG] - class='net.imagej.plugins.tools.PaintBrushTool', name='Paintbrush', description='Paintbrush Tool', iconPath='/icons/tools/paintbrush.png', priority=-300.0, enabled=true, pluginType=Tool
[DEBUG] - class='net.imagej.plugins.tools.PencilTool', name='Pencil', description='Pencil Tool', iconPath='/icons/tools/pencil.png', priority=-301.0, enabled=true, pluginType=Tool
[DEBUG] - class='net.imagej.plugins.tools.SprayCanTool', name='SprayCan', label='Spray Can', description='Spray Can Tool', iconPath='/icons/tools/spray-can.png', priority=-303.0, enabled=true, pluginType=Tool
[DEBUG] - class='net.imagej.plugins.tools.FloodFillTool', name='FloodFill', label='Flood Fill', description='Flood Fill Tool', iconPath='/icons/tools/flood-fill.png', priority=-304.0, enabled=true, pluginType=Tool
[DEBUG] - class='net.imagej.plugins.tools.ArrowTool', name='Arrow', description='Arrow Tool', iconPath='/icons/tools/arrow.png', priority=-305.0, enabled=false, pluginType=Tool
[DEBUG] - class='net.imagej.plugins.tools.FgColorTool', name='Foreground', iconPath='/icons/tools/blank.png', priority=-500.0, enabled=true, pluginType=Tool
[DEBUG] - class='net.imagej.plugins.tools.BgColorTool', name='Background', iconPath='/icons/tools/blankBlack.png', priority=-501.0, enabled=true, pluginType=Tool
[DEBUG] - class='io.scif.ome.formats.OMETIFFFormat', priority=-9998.0, enabled=true, pluginType=Format
[DEBUG] - class='io.scif.ome.formats.OMETIFFFormat$OMETIFFTranslator', priority=-9998.0, enabled=true, pluginType=Translator
[DEBUG] - class='org.scijava.module.process.LoadInputsPreprocessor', priority=-9999.0, enabled=true, pluginType=PreprocessorPlugin
[DEBUG] - class='io.scif.formats.TIFFFormat$TIFFTranslator', priority=-9999.0, enabled=true, pluginType=Translator
[DEBUG] - class='io.scif.formats.TIFFFormat', name='Tagged Image File Format', priority=-9999.0, enabled=true, pluginType=Format
[DEBUG] - class='org.scijava.ui.FilePreprocessor', priority=-9999.5, enabled=true, pluginType=PreprocessorPlugin
[DEBUG] - class='org.scijava.ui.awt.widget.AWTInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin
[DEBUG] - class='org.scijava.plugins.text.plain.PlainTextFormat', priority=-10000.0, enabled=true, pluginType=TextFormat
[DEBUG] - class='org.scijava.display.DisplayPostprocessor', priority=-10000.0, enabled=true, pluginType=PostprocessorPlugin
[DEBUG] - class='io.scif.DefaultTranslator', priority=-10000.0, enabled=true, pluginType=Translator
[DEBUG] - class='net.imagej.legacy.ui.LegacyInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin
[DEBUG] - class='org.scijava.ui.swing.widget.SwingInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin
[DEBUG] - class='org.scijava.ui.swing.widget.SwingMdiInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin
[DEBUG] - class='net.imagej.ui.swing.overlay.DefaultJHotDrawAdapter', priority=-10000.0, enabled=true, pluginType=JHotDrawAdapter
[DEBUG] - class='org.scijava.platform.DefaultPlatform', name='Default', priority=-10000.0, enabled=true, pluginType=Platform
[DEBUG] - class='net.imagej.plugins.tools.AcceleratorHandler', name='Keyboard Shortcuts', priority=-10000.0, enabled=true, pluginType=Tool
[DEBUG] - class='io.scif.formats.MinimalTIFFFormat', name='Minimal TIFF', priority=-10000.0, enabled=true, pluginType=Format
[DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToImageFunctional', name='add', priority=-10000.0, enabled=true, pluginType=Op
[DEBUG] - class='net.imagej.ops.chunker.InterleavedChunker', name='chunker', priority=-10000.0, enabled=true, pluginType=Op
[DEBUG] - class='org.scijava.module.process.CheckInputsPreprocessor', priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin
[DEBUG] - class='org.scijava.module.process.SaveInputsPreprocessor', priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin
[DEBUG] - class='io.scif.formats.TIFFJAIFormat', name='Tagged Image File Format', priority=-10001.0, enabled=true, pluginType=Format
[DEBUG] - class='net.imagej.ops.misc.SizeIterable', name='size', priority=-Infinity, enabled=true, pluginType=Op
[DEBUG] Created service 'org.scijava.plugin.DefaultPluginService' in 51 ms
[DEBUG] Creating service: org.scijava.object.DefaultObjectService
log4j:WARN No appenders could be found for logger (org.bushe.swing.event.EventService).
log4j:WARN Please initialize the log4j system properly.
log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info.
[DEBUG] Created service 'org.scijava.object.DefaultObjectService' in 72 ms
[DEBUG] Creating service: org.scijava.module.DefaultModuleService
[DEBUG] Creating service: org.scijava.prefs.DefaultPrefService
[DEBUG] Created service 'org.scijava.prefs.DefaultPrefService' in 4 ms
[DEBUG] Creating service: org.scijava.convert.DefaultConvertService
[DEBUG] Created service 'org.scijava.convert.DefaultConvertService' in 4 ms
[DEBUG] Created service 'org.scijava.module.DefaultModuleService' in 14 ms
[DEBUG] Creating service: org.scijava.command.DefaultCommandService
[DEBUG] Created service 'org.scijava.command.DefaultCommandService' in 36 ms
[DEBUG] Created service 'org.scijava.script.DefaultScriptService' in 184 ms
[DEBUG] Creating service: net.imagej.lut.DefaultLUTService
[DEBUG] Creating service: net.imagej.DefaultDatasetService
[DEBUG] Creating service: io.scif.services.DefaultFormatService
[DEBUG] Created service 'io.scif.services.DefaultFormatService' in 3 ms
[DEBUG] Creating service: net.imagej.types.DefaultDataTypeService
[INFO] Found 11 DataType plugins.
[DEBUG] Created service 'net.imagej.types.DefaultDataTypeService' in 40 ms
[DEBUG] Created service 'net.imagej.DefaultDatasetService' in 61 ms
[DEBUG] Creating service: org.scijava.display.DefaultDisplayService
[DEBUG] Created service 'org.scijava.display.DefaultDisplayService' in 5 ms
[DEBUG] Creating service: net.imagej.display.DefaultImageDisplayService
[DEBUG] Created service 'net.imagej.display.DefaultImageDisplayService' in 3 ms
[DEBUG] Created service 'net.imagej.lut.DefaultLUTService' in 74 ms
[DEBUG] Creating service: net.imagej.legacy.DefaultLegacyService
[DEBUG] Creating service: net.imagej.display.DefaultOverlayService
[DEBUG] Creating service: org.scijava.options.DefaultOptionsService
[DEBUG] Created service 'org.scijava.options.DefaultOptionsService' in 2 ms
[DEBUG] Creating service: net.imagej.ui.awt.AWTRenderingService
[DEBUG] Created service 'net.imagej.ui.awt.AWTRenderingService' in 1 ms
[DEBUG] Created service 'net.imagej.display.DefaultOverlayService' in 10 ms
[DEBUG] Creating service: net.imagej.threshold.DefaultThresholdService
[DEBUG] Created service 'net.imagej.threshold.DefaultThresholdService' in 4 ms
[DEBUG] Creating service: org.scijava.menu.DefaultMenuService
[DEBUG] Created service 'org.scijava.menu.DefaultMenuService' in 3 ms
[DEBUG] Creating service: org.scijava.app.DefaultStatusService
[DEBUG] Creating service: org.scijava.app.DefaultAppService
[DEBUG] Created service 'org.scijava.app.DefaultAppService' in 4 ms
[DEBUG] Created service 'org.scijava.app.DefaultStatusService' in 5 ms
[INFO] Found 8 ScriptLanguage plugins.
[INFO] Found 0 scripts
[INFO] Overriding Upload Sample Image; identifier: command:net.imagej.plugins.commands.upload.SampleImageUploader; jar: file:/opt/Fiji.app/jars/imagej-plugins-commands-0.2.6.jar
[INFO] Overriding Test FlowCam; identifier: script:/opt/Fiji.app/plugins/FlowCam/Test_FlowCam.ijm; jar: file:/opt/Fiji.app/jars/scijava-common-2.33.0.jar
[DEBUG] Created service 'net.imagej.legacy.DefaultLegacyService' in 685 ms
[DEBUG] Creating service: fiji.DefaultFijiService
[DEBUG] Created service 'fiji.DefaultFijiService' in 1 ms
[DEBUG] Creating service: net.imglib2.meta.units.DefaultUnitService
[DEBUG] Created service 'net.imglib2.meta.units.DefaultUnitService' in 44 ms
[DEBUG] Creating service: net.imagej.ui.awt.AWTScreenCaptureService
[DEBUG] Created service 'net.imagej.ui.awt.AWTScreenCaptureService' in 2 ms
[DEBUG] Creating service: org.scijava.input.DefaultInputService
[DEBUG] Created service 'org.scijava.input.DefaultInputService' in 6 ms
[DEBUG] Creating service: org.scijava.ui.DefaultUIService
[DEBUG] Creating service: org.scijava.platform.DefaultPlatformService
[DEBUG] Creating service: org.scijava.platform.DefaultAppEventService
[DEBUG] Created service 'org.scijava.platform.DefaultAppEventService' in 2 ms
[INFO] Found 1 Platform plugins.
[DEBUG] Configuring platform: org.scijava.platform.DefaultPlatform
[DEBUG] Created service 'org.scijava.platform.DefaultPlatformService' in 11 ms
[DEBUG] Creating service: org.scijava.tool.DefaultToolService
[DEBUG] Created service 'org.scijava.tool.DefaultToolService' in 5 ms
[DEBUG] Created service 'org.scijava.ui.DefaultUIService' in 23 ms
[DEBUG] Creating service: org.scijava.ui.dnd.DefaultDragAndDropService
[DEBUG] Created service 'org.scijava.ui.dnd.DefaultDragAndDropService' in 5 ms
[DEBUG] Creating service: org.scijava.text.DefaultTextService
[DEBUG] Created service 'org.scijava.text.DefaultTextService' in 3 ms
[DEBUG] Creating service: org.scijava.io.DefaultRecentFileService
[DEBUG] Created service 'org.scijava.io.DefaultRecentFileService' in 61 ms
[DEBUG] Creating service: org.scijava.io.DefaultIOService
[DEBUG] Created service 'org.scijava.io.DefaultIOService' in 4 ms
[DEBUG] Creating service: org.scijava.widget.DefaultWidgetService
[INFO] Found 22 InputWidget plugins.
[DEBUG] Created service 'org.scijava.widget.DefaultWidgetService' in 6 ms
[DEBUG] Creating service: org.scijava.welcome.DefaultWelcomeService
[DEBUG] Created service 'org.scijava.welcome.DefaultWelcomeService' in 2 ms
[DEBUG] Creating service: org.scijava.script.DefaultScriptHeaderService
[DEBUG] Created service 'org.scijava.script.DefaultScriptHeaderService' in 2 ms
[DEBUG] Creating service: org.scijava.event.DefaultEventHistory
[DEBUG] Created service 'org.scijava.event.DefaultEventHistory' in 2 ms
[DEBUG] Creating service: org.scijava.console.DefaultConsoleService
[DEBUG] Created service 'org.scijava.console.DefaultConsoleService' in 2 ms
[DEBUG] Creating service: net.imagej.operator.DefaultCalculatorService
[DEBUG] Created service 'net.imagej.operator.DefaultCalculatorService' in 2 ms
[DEBUG] Creating service: net.imagej.autoscale.DefaultAutoscaleService
[DEBUG] Created service 'net.imagej.autoscale.DefaultAutoscaleService' in 3 ms
[DEBUG] Creating service: net.imagej.sampler.DefaultSamplerService
[DEBUG] Created service 'net.imagej.sampler.DefaultSamplerService' in 3 ms
[DEBUG] Creating service: net.imagej.display.DefaultZoomService
[DEBUG] Created service 'net.imagej.display.DefaultZoomService' in 2 ms
[DEBUG] Creating service: net.imagej.display.DefaultWindowService
[DEBUG] Created service 'net.imagej.display.DefaultWindowService' in 2 ms
[DEBUG] Creating service: net.imagej.DefaultImgPlusService
[DEBUG] Created service 'net.imagej.DefaultImgPlusService' in 1 ms
[DEBUG] Creating service: net.imagej.ui.DefaultImageJUIService
[DEBUG] Created service 'net.imagej.ui.DefaultImageJUIService' in 1 ms
[DEBUG] Creating service: net.imagej.measure.DefaultStatisticsService
[DEBUG] Created service 'net.imagej.measure.DefaultStatisticsService' in 3 ms
[DEBUG] Creating service: net.imagej.measure.DefaultMeasurementService
[DEBUG] Created service 'net.imagej.measure.DefaultMeasurementService' in 1 ms
[DEBUG] Creating service: net.imagej.animation.DefaultAnimationService
[DEBUG] Created service 'net.imagej.animation.DefaultAnimationService' in 4 ms
[DEBUG] Creating service: io.scif.io.DefaultNIOService
[DEBUG] Created service 'io.scif.io.DefaultNIOService' in 2 ms
[DEBUG] Creating service: io.scif.img.converters.DefaultPlaneConverterService
[DEBUG] Created service 'io.scif.img.converters.DefaultPlaneConverterService' in 6 ms
[DEBUG] Creating service: io.scif.img.DefaultImgUtilityService
[DEBUG] Created service 'io.scif.img.DefaultImgUtilityService' in 5 ms
[DEBUG] Creating service: io.scif.gui.DefaultGUIService
[DEBUG] Created service 'io.scif.gui.DefaultGUIService' in 3 ms
[DEBUG] Creating service: io.scif.xml.DefaultXMLService
[DEBUG] Created service 'io.scif.xml.DefaultXMLService' in 22 ms
[DEBUG] Creating service: io.scif.refs.DefaultRefManagerService
[DEBUG] Created service 'io.scif.refs.DefaultRefManagerService' in 1 ms
[DEBUG] Creating service: io.scif.services.DefaultTranslatorService
[DEBUG] Created service 'io.scif.services.DefaultTranslatorService' in 2 ms
[DEBUG] Creating service: io.scif.codec.DefaultCodecService
[DEBUG] Created service 'io.scif.codec.DefaultCodecService' in 1 ms
[DEBUG] Creating service: io.scif.img.cell.cache.MapDBCache
[DEBUG] Created service 'io.scif.img.cell.cache.MapDBCache' in 8 ms
[DEBUG] Creating service: io.scif.DefaultMetadataService
[DEBUG] Created service 'io.scif.DefaultMetadataService' in 0 ms
[DEBUG] Creating service: io.scif.services.DefaultFilePatternService
[DEBUG] Created service 'io.scif.services.DefaultFilePatternService' in 2 ms
[DEBUG] Creating service: io.scif.formats.tiff.DefaultTiffService
[DEBUG] Created service 'io.scif.formats.tiff.DefaultTiffService' in 3 ms
[DEBUG] Creating service: io.scif.services.DefaultLocationService
[DEBUG] Created service 'io.scif.services.DefaultLocationService' in 1 ms
[DEBUG] Creating service: io.scif.services.JAIIIOServiceImpl
[DEBUG] Created service 'io.scif.services.JAIIIOServiceImpl' in 24 ms
[DEBUG] Creating service: io.scif.formats.qt.DefaultQTJavaService
[DEBUG] Created service 'io.scif.formats.qt.DefaultQTJavaService' in 5 ms
[DEBUG] Creating service: org.scijava.ui.swing.SwingIconService
[DEBUG] Created service 'org.scijava.ui.swing.SwingIconService' in 3 ms
[DEBUG] Creating service: org.scijava.plugins.scripting.java.DefaultJavaService
[DEBUG] Created service 'org.scijava.plugins.scripting.java.DefaultJavaService' in 2 ms
[DEBUG] Creating service: net.imagej.ui.swing.overlay.JHotDrawService
[DEBUG] Created service 'net.imagej.ui.swing.overlay.JHotDrawService' in 3 ms
[DEBUG] Creating service: net.imagej.updater.DefaultUpdateService
[DEBUG] Created service 'net.imagej.updater.DefaultUpdateService' in 7 ms
[DEBUG] Creating service: net.imagej.updater.DefaultUploaderService
[DEBUG] Created service 'net.imagej.updater.DefaultUploaderService' in 1 ms
[DEBUG] Creating service: net.imagej.ops.DefaultOpService
[DEBUG] Creating service: net.imagej.ops.DefaultOpMatchingService
[DEBUG] Created service 'net.imagej.ops.DefaultOpMatchingService' in 2 ms
[DEBUG] Created service 'net.imagej.ops.DefaultOpService' in 5 ms
[DEBUG] Creating service: net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor
[DEBUG] Created service 'net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor' in 1 ms
[DEBUG] Creating service: io.scif.ome.services.DefaultOMEXMLService
[DEBUG] Created service 'io.scif.ome.services.DefaultOMEXMLService' in 30 ms
[DEBUG] Creating service: io.scif.ome.services.DefaultOMEMetadataService
[DEBUG] Created service 'io.scif.ome.services.DefaultOMEMetadataService' in 11 ms
[DEBUG] Creating service: net.imagej.display.DummyScreenCaptureService
[DEBUG] Created service 'net.imagej.display.DummyScreenCaptureService' in 0 ms
[DEBUG] Creating service: net.imagej.render.DummyRenderingService
[DEBUG] Created service 'net.imagej.render.DummyRenderingService' in 1 ms
[DEBUG] Creating service: io.scif.services.DefaultInitializeService
[DEBUG] Created service 'io.scif.services.DefaultInitializeService' in 3 ms
[DEBUG] Received command line arguments:
[DEBUG] publish(
        context = org.scijava.Context@7c92eb86
        consumed = false,null,null), called from non-EDT Thread:null
[DEBUG] -port7
[DEBUG] -macro
[DEBUG] /home/btupper/hello.ijm
[DEBUG] -batch
[INFO] Found 11 ConsoleArgument plugins.
[ERROR] Skipping unsupported option -port7
[DEBUG] publish(
        context = org.scijava.Context@7c92eb86
        consumed = false,null,null), called from non-EDT Thread:null
[INFO] Discovered user interface: net.imagej.legacy.ui.LegacyUI
[INFO] Discovered user interface: org.scijava.ui.swing.sdi.SwingSDIUI
[INFO] Discovered user interface: org.scijava.ui.awt.AWTUI
[INFO] Discovered user interface: org.scijava.ui.swing.mdi.SwingMdiUI
[btupper@fcm-flow ~]$

--
ImageJ mailing list: http://imagej.nih.gov/ij/list.html
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Re: Warning/Error using Fiji on linux

Rasband, Wayne (NIH/NIMH) [E]
On Dec 16, 2014, at 3:11 PM, Ben Tupper <[hidden email]> wrote:

>
> Hello,
>
> I'm learning to use Fiji in a headless CentOS 6 environment.  I first updated fiji using...
>
> $ fiji --update update
>
>
> I have a simple macro, '~/hello.ijm', adapted from this one... http://rsb.info.nih.gov/ij/macros/SaveTextFileDemo.txt
>
> //
> //START ~/hello.ijm
> //
> f = File.open("/home/btupper/hello.txt");
> // use d2s() function (double to string) to specify decimal places
> for (i=0; i<=2*PI; i+=0.01)
>    print(f, d2s(i,6) + "  \t" + d2s(sin(i),6) + " \t" + d2s(cos(i),6));
> //
> //FINISH ~/hello.ijm
> //
>
> I then run the macro from the command line. The macro successfully creates and populates the '~/hello.txt' file.  However, I get log4j warnings and an error as shown below.  (Note, I have pasted in below the entire output when I set the --debug flag.)

You should report this bug using Fiji’s Help>Report a Bug command. The bug report will automatically provide more information about your setup and it will help the Fiji developers keep track of your bug report so that it is not forgotten. http://imagej.net/Bugs

-wayne

> [btupper@fcm-flow ~]$ fiji --headless -macro /home/btupper/hello.ijm
> log4j:WARN No appenders could be found for logger (org.bushe.swing.event.EventService).
> log4j:WARN Please initialize the log4j system properly.
> log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info.
> [ERROR] Skipping unsupported option -port7
>
> Here is a bit more info about the Fiji installation.  
>
> [btupper@fcm-flow ~]$ fiji --print-java-home
> /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24/
> [btupper@fcm-flow ~]$ fiji --print-ij-dir
> /opt/Fiji.app
>
>
> Do I need to worry about the warnings?  I can't locate any instructions for initializing log4j on the Fiji website.  I have found these 3rd party instructions [ http://www.javabeat.net/baisc-steps-to-configure-log4j-using-xml-and-properties-file/ ] but I have no idea if the are appropriate for what Fiji requires.  
>
> I also have no idea how to resolve the error.  
>
> Any suggestions?
>
> Thanks!
> Ben
>
>
> P.S. Below is the command and output with --debug set
>
> [btupper@fcm-flow ~]$ fiji --debug --headless -macro /home/btupper/hello.ijm
> Available RAM: 3727MB, using 3/4 of that: 2796MB
> JRE not found in '/opt/Fiji.app/jre'
> JAVA_HOME contains a JRE: '/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre'
> Re-executing with correct library lookup path (/opt/Fiji.app/lib/linux64:/opt/Fiji.app/mm/linux64)
> Available RAM: 3727MB, using 3/4 of that: 2796MB
> JRE not found in '/opt/Fiji.app/jre'
> JAVA_HOME contains a JRE: '/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre'
> Appending missing -batch flag for headless operation.
> java -Dpython.cachedir.skip=true -Dplugins.dir=/opt/Fiji.app -Xmx2796m -Djava.awt.headless=true -Dapple.awt.UIElement=true -Xincgc -XX:PermSize=128m -Dsun.java.command=ImageJ -Djava.class.path=/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar -Dimagej.dir=/opt/Fiji.app -Dij.dir=/opt/Fiji.app -Dfiji.dir=/opt/Fiji.app -Dfiji.defaultLibPath=lib/amd64/server/libjvm.so -Dfiji.executable=/opt/Fiji.app/fiji-linux64 -Dij.executable=/opt/Fiji.app/fiji-linux64 -Djava.library.path=/opt/Fiji.app/lib/linux64:/opt/Fiji.app/mm/linux64 -Dij.debug=true -Dscijava.log.level=debug net.imagej.launcher.ClassLauncher -classpath /opt/Fiji.app/jars/ij-1.49m.jar fiji.Main -port7 -macro /home/btupper/hello.ijm -batch
> Using JAVA_HOME /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre
> Opening Java library /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre/lib/amd64/server/libjvm.so
> Adding option: -Djava.home=/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24/
> Launching main class fiji.Main with parameters [-port7, -macro, /home/btupper/hello.ijm, -batch]
> Class loader = sun.misc.Launcher$AppClassLoader@b92d342
> ij1.plugin.dirs: null
> $HOME/.plugins: /home/btupper/.plugins does not exist
> Launching main class net.imagej.Main with parameters [-port7, -macro, /home/btupper/hello.ijm, -batch]
> Class loader = sun.misc.Launcher$AppClassLoader@b92d342
> Checking class loader: sun.misc.Launcher$AppClassLoader@b92d342
> Checking URL: file:/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar
> Not Eclipse because first entry is: file:/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar
> [DEBUG] Creating service: org.scijava.event.DefaultEventService
> [DEBUG] Creating service: org.scijava.log.StderrLogService
> [DEBUG] Created service 'org.scijava.log.StderrLogService' in 2 ms
> [DEBUG] Creating service: org.scijava.thread.DefaultThreadService
> [DEBUG] Created service 'org.scijava.thread.DefaultThreadService' in 1 ms
> [DEBUG] Created service 'org.scijava.event.DefaultEventService' in 47 ms
> [DEBUG] Creating service: org.scijava.script.DefaultScriptService
> [DEBUG] Creating service: org.scijava.plugin.DefaultPluginService
> [INFO] Found 777 plugins.
> [DEBUG] - class='org.scijava.module.process.DebugPreprocessor', priority=Infinity, enabled=true, pluginType=PreprocessorPlugin
> [DEBUG] - class='org.scijava.module.process.DebugPostprocessor', priority=Infinity, enabled=true, pluginType=PostprocessorPlugin
> [DEBUG] - class='net.imagej.plugins.tools.KonamiHandler', name='Konami', priority=Infinity, enabled=true, pluginType=Tool
> [DEBUG] - class='org.scijava.event.DefaultEventService', priority=100000.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.module.process.ValidityPreprocessor', priority=10001.0, enabled=true, pluginType=PreprocessorPlugin
> [DEBUG] - class='org.scijava.ui.UIPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
> [DEBUG] - class='org.scijava.display.ActiveDisplayPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
> [DEBUG] - class='org.scijava.module.process.GatewayPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
> [DEBUG] - class='org.scijava.module.process.ServicePreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
> [DEBUG] - class='net.imagej.display.ActiveImagePreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
> [DEBUG] - class='net.imagej.legacy.plugin.ActiveImagePlusPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
> [DEBUG] - class='io.scif.bf.BioFormatsFormat', name='Bio-Formats Compatibility Format', priority=10000.0, enabled=true, pluginType=Format
> [DEBUG] - class='net.imagej.ops.slicer.SlicewiseRAI2RAI', name='slicemapper', priority=10000.0, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ops.arithmetic.add.parallel.AddConstantToArrayDoubleImageP', name='add', priority=111.0, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ops.arithmetic.add.parallel.AddConstantToArrayByteImageP', name='add', priority=110.0, enabled=true, pluginType=Op
> [DEBUG] - class='io.scif.ome.translators.OMETIFFTranslator$OMEtoOMETIFFTranslator', priority=101.0, enabled=true, pluginType=ToOMETranslator
> [DEBUG] - class='io.scif.ome.translators.OMETIFFTranslator$OMETIFFtoOMETranslator', priority=101.0, enabled=true, pluginType=FromOMETranslator
> [DEBUG] - class='io.scif.bf.ome.BioFormatsTranslator$BioFormatsOMETranslator', priority=101.0, enabled=true, pluginType=ToOMETranslator
> [DEBUG] - class='net.imagej.app.ToplevelImageJApp', name='ImageJ', priority=101.0, enabled=true, pluginType=App
> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToArrayDoubleImage', name='add', priority=101.0, enabled=true, pluginType=Op
> [DEBUG] - class='org.scijava.ui.awt.widget.AWTMessageWidget', priority=100.0, enabled=true, pluginType=InputWidget
> [DEBUG] - class='org.scijava.module.process.InitPreprocessor', priority=100.0, enabled=true, pluginType=PreprocessorPlugin
> [DEBUG] - class='org.scijava.script.DefaultScriptService', priority=100.0, enabled=true, pluginType=Service
> [DEBUG] - class='net.imagej.lut.DefaultLUTService', priority=100.0, enabled=true, pluginType=Service
> [DEBUG] - class='net.imagej.legacy.display.LegacyImageDisplayViewer', priority=100.0, enabled=true, pluginType=DisplayViewer
> [DEBUG] - class='net.imagej.legacy.display.LegacyTextDisplayViewer', priority=100.0, enabled=true, pluginType=DisplayViewer
> [DEBUG] - class='org.scijava.ui.swing.widget.SwingMessageWidget', priority=100.0, enabled=true, pluginType=InputWidget
> [DEBUG] - class='net.imagej.ui.swing.overlay.RectangleJHotDrawAdapter', priority=100.0, enabled=true, pluginType=JHotDrawAdapter
> [DEBUG] - class='net.imagej.ui.swing.overlay.ThresholdJHotDrawAdapter', priority=100.0, enabled=true, pluginType=JHotDrawAdapter
> [DEBUG] - class='io.scif.ome.translators.BMPTranslator$BMPOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
> [DEBUG] - class='io.scif.ome.translators.MicromanagerTranslator$MicromanagerOMETranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator
> [DEBUG] - class='io.scif.ome.translators.OBFTranslator$OBFOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
> [DEBUG] - class='io.scif.ome.translators.TIFFTranslator$TIFFOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
> [DEBUG] - class='io.scif.ome.translators.TIFFTranslator$OMETIFFTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator
> [DEBUG] - class='io.scif.ome.translators.APNGTranslator$OMEAPNGTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator
> [DEBUG] - class='io.scif.ome.translators.APNGTranslator$APNGOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
> [DEBUG] - class='io.scif.ome.translators.ICSTranslator$OMEICSTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator
> [DEBUG] - class='io.scif.ome.translators.ICSTranslator$ICSOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
> [DEBUG] - class='io.scif.ome.translators.DICOMTranslator$DICOMOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
> [DEBUG] - class='io.scif.ome.translators.NRRDTranslator$NRRDOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
> [DEBUG] - class='io.scif.ome.translators.EPSTranslator$OMEEPSTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator
> [DEBUG] - class='net.imagej.operator.OpAdd', name='Add', priority=100.0, enabled=true, pluginType=CalculatorOp
> [DEBUG] - class='net.imagej.app.ImageJApp', name='ImageJ', priority=100.0, enabled=true, pluginType=App
> [DEBUG] - class='net.imagej.ui.swing.tools.SwingRectangleTool', name='Rectangle', description='Rectangular overlays', iconPath='/icons/tools/rectangle.png', priority=100.0, enabled=true, pluginType=Tool
> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToArrayByteImage', name='add', priority=100.0, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$AddOp', name='add', priority=100.0, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$DivideOp', name='divide', priority=100.0, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.legacy.ui.LegacyUI', name='legacy', priority=100.0, enabled=true, pluginType=UserInterface
> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$MultiplyOp', name='multiply', priority=100.0, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$SubtractOp', name='subtract', priority=100.0, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ui.swing.overlay.EllipseJHotDrawAdapter', priority=99.0, enabled=true, pluginType=JHotDrawAdapter
> [DEBUG] - class='net.imagej.ui.swing.tools.SwingEllipseTool', name='Oval', description='Oval selections', iconPath='/icons/tools/oval.png', priority=99.0, enabled=true, pluginType=Tool
> [DEBUG] - class='net.imagej.operator.OpSubtract', name='Subtract', priority=99.0, enabled=true, pluginType=CalculatorOp
> [DEBUG] - class='net.imagej.ui.swing.overlay.GeneralPathJHotDrawAdapter', priority=98.5, enabled=true, pluginType=JHotDrawAdapter
> [DEBUG] - class='net.imagej.ui.swing.overlay.PolygonJHotDrawAdapter', priority=98.0, enabled=true, pluginType=JHotDrawAdapter
> [DEBUG] - class='net.imagej.operator.OpMultiply', name='Multiply', priority=98.0, enabled=true, pluginType=CalculatorOp
> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPolygonTool', name='Polygon', description='Polygon overlays', iconPath='/icons/tools/polygon.png', priority=98.0, enabled=true, pluginType=Tool
> [DEBUG] - class='net.imagej.ui.swing.overlay.LineJHotDrawAdapter', priority=97.0, enabled=true, pluginType=JHotDrawAdapter
> [DEBUG] - class='net.imagej.operator.OpDivide', name='Divide', priority=97.0, enabled=true, pluginType=CalculatorOp
> [DEBUG] - class='net.imagej.ui.swing.tools.SwingLineTool', name='Line', description='Straight line overlays', iconPath='/icons/tools/line.png', priority=97.0, enabled=true, pluginType=Tool
> [DEBUG] - class='net.imagej.ui.swing.overlay.PolylineJHotDrawAdapter', priority=96.0, enabled=true, pluginType=JHotDrawAdapter
> [DEBUG] - class='net.imagej.operator.OpAnd', name='AND', priority=96.0, enabled=true, pluginType=CalculatorOp
> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPolylineTool', name='Polyline', description='Polyline overlays', iconPath='/icons/tools/polyline.png', priority=96.0, enabled=true, pluginType=Tool
> [DEBUG] - class='net.imagej.ui.swing.overlay.AngleJHotDrawAdapter', priority=95.0, enabled=true, pluginType=JHotDrawAdapter
> [DEBUG] - class='net.imagej.ui.swing.tools.SwingAngleTool', name='Angle', description='Angle overlays', iconPath='/icons/tools/angle.png', priority=95.0, enabled=true, pluginType=Tool
> [DEBUG] - class='net.imagej.operator.OpOr', name='OR', priority=95.0, enabled=true, pluginType=CalculatorOp
> [DEBUG] - class='net.imagej.ui.swing.overlay.PointJHotDrawOverlay', priority=94.0, enabled=true, pluginType=JHotDrawAdapter
> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPointTool', name='Point', description='Point overlays', iconPath='/icons/tools/point.png', priority=94.0, enabled=true, pluginType=Tool
> [DEBUG] - class='net.imagej.operator.OpXor', name='XOR', priority=94.0, enabled=true, pluginType=CalculatorOp
> [DEBUG] - class='net.imagej.operator.OpMin', name='Min', priority=93.0, enabled=true, pluginType=CalculatorOp
> [DEBUG] - class='net.imagej.operator.OpMax', name='Max', priority=92.0, enabled=true, pluginType=CalculatorOp
> [DEBUG] - class='net.imagej.operator.OpAverage', name='Average', priority=91.0, enabled=true, pluginType=CalculatorOp
> [DEBUG] - class='net.imagej.operator.OpDifference', name='Difference', priority=90.0, enabled=true, pluginType=CalculatorOp
> [DEBUG] - class='net.imagej.operator.OpCopy', name='Copy', priority=89.0, enabled=true, pluginType=CalculatorOp
> [DEBUG] - class='net.imagej.operator.OpTransparentZero', name='Transparent-zero', priority=88.0, enabled=true, pluginType=CalculatorOp
> [DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.FastLAPTrackerFactory', priority=10.0, enabled=true, pluginType=SpotTrackerFactory
> [DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.SimpleFastLAPTrackerFactory', priority=10.0, enabled=true, pluginType=SpotTrackerFactory
> [DEBUG] - class='net.imagej.legacy.DefaultLegacyService', priority=1.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.ui.swing.widget.SwingChoiceRadioWidget', priority=1.0, enabled=true, pluginType=InputWidget
> [DEBUG] - class='net.imagej.ops.onthefly.JavassistOptimizer', priority=1.0, enabled=true, pluginType=Optimizer
> [DEBUG] - class='fiji.plugin.trackmate.visualization.threedviewer.SpotDisplayer3DFactory', priority=1.0, enabled=true, pluginType=ViewFactory
> [DEBUG] - class='fiji.plugin.trackmate.tracking.kdtree.NearestNeighborTrackerFactory', priority=1.0, enabled=true, pluginType=SpotTrackerFactory
> [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotContrastAndSNRAnalyzerFactory', priority=1.0, enabled=true, pluginType=SpotAnalyzerFactory
> [DEBUG] - class='net.imagej.ops.invert.InvertII', name='invert', priority=1.0, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ops.generated.AddConstantToDouble', name='add', priority=0.6, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ops.generated.AddConstantToLong', name='add', priority=0.5, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ops.generated.AddConstantToFloat', name='add', priority=0.4, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ops.generated.AddConstantToInteger', name='add', priority=0.3, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ops.generated.AddConstantToShort', name='add', priority=0.2, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ops.generated.AddConstantToByte', name='add', priority=0.1, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.plugins.commands.assign.AndDataValuesWith', menu='Process > Math > AND...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.app.AboutImageJ', label='About ImageJ...', menu='Help > About ImageJ...', iconPath='/icons/commands/information.png', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.assign.AbsDataValues', menu='Process > Math > Abs...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionAdaptiveMedian', menu='Process > Noise > Noise Reduction > Adaptive Median', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.restructure.AddAxis', menu='Image > Axes > Add Axis...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.restructure.AddData', menu='Image > Data > Add Data...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.overlay.AddImage', menu='Image > Overlay > Add Image', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.assign.AddNoiseToDataValues', menu='Process > Noise > Add Noise...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.assign.AddSpecifiedNoiseToDataValues', menu='Process > Noise > Add Specified Noise...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.assign.AddToDataValues', menu='Process > Math > Add...', iconPath='/icons/commands/sum.png', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionAlphaTrimmedMean', menu='Process > Noise > Noise Reduction > Alpha Trimmed Mean', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.animation.AnimationOptions', menu='Image > Animation > Animation Options...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.options.OptionsAppearance', menu='Edit > Options > Appearance...', priority=0.0, enabled=true, pluginType=OptionsPlugin
> [DEBUG] - class='net.imagej.ops.commands.threshold.GlobalThresholder', menu='Image > Threshold > Apply Threshold', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.options.OptionsArrowTool', menu='Edit > Options > Arrow Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin
> [DEBUG] - class='net.imagej.plugins.commands.display.AutoContrast', menu='Image > Adjust > Auto-Contrast', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.axispos.AxisPositionBackward', menu='Image > Axes > Axis Position Backward', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.axispos.AxisPositionForward', menu='Image > Axes > Axis Position Forward', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.misc.Benchmark', menu='Plugins > Utilities > Benchmark', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.imglib.Binner', menu='Image > Transform > Bin...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.binary.Binarize', menu='Process > Binary > Binarize...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.display.interactive.BrightnessContrast', menu='Image > Adjust > Brightness/Contrast...', iconPath='/icons/commands/contrast.png', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.debug.ButtonDemo', menu='Plugins > Sandbox > Button Demo', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.display.CaptureImage', menu='Plugins > Utilities > Capture Image', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.display.CaptureScreen', menu='Plugins > Utilities > Capture Screen', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.typechange.TypeChanger', menu='Image > Type > Change...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.display.ChannelsTool', menu='Image > Color > Channels Tool...', iconPath='/icons/commands/color_wheel.png', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.options.OptionsChannels', menu='Edit > Options > Channels...', priority=0.0, enabled=true, pluginType=OptionsPlugin
> [DEBUG] - class='org.scijava.plugins.commands.io.ClearRecent', label='Clear Recent', menu='File > Open Recent > Clear List', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='org.scijava.plugins.commands.display.Close', menu='File > Close', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.binary.CloseBinaryImage', menu='Process > Binary > Close', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='org.scijava.plugins.commands.display.CloseAll', menu='File > Close All', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.options.OptionsCompatibility', menu='Edit > Options > Compatibility...', priority=0.0, enabled=true, pluginType=OptionsPlugin
> [DEBUG] - class='net.imagej.options.OptionsCompiler', menu='Edit > Options > Compiler...', priority=0.0, enabled=true, pluginType=OptionsPlugin
> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionContraharmonicMean', menu='Process > Noise > Noise Reduction > Contraharmonic Mean', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.options.OptionsConversions', menu='Edit > Options > Conversions...', priority=0.0, enabled=true, pluginType=OptionsPlugin
> [DEBUG] - class='net.imagej.ops.commands.convert.ConvertImgPlus', menu='Image > Convert', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.ops.commands.convolve.Convolve', menu='Image > Convolve', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.app.CopyToSystem', menu='Edit > Copy To System', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.binary.CreateMask', menu='Process > Binary > Create Mask...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.app.CreateShortcut', menu='Plugins > Shortcuts > Create Shortcut...', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.imglib.CropImage', menu='Image > Crop', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.options.OptionsDicom', menu='Edit > Options > DICOM...', priority=0.0, enabled=true, pluginType=OptionsPlugin
> [DEBUG] - class='net.imagej.options.OptionsOverlay', label='Default Overlay Settings', menu='Image > Overlay > Overlay Options...', priority=0.0, enabled=true, pluginType=OptionsPlugin
> [DEBUG] - class='net.imagej.plugins.commands.restructure.DeleteAxis', menu='Image > Axes > Delete Axis...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.restructure.DeleteData', menu='Image > Data > Delete Data...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.display.interactive.DeleteThreshold', menu='Image > Adjust > Delete Threshold', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.display.DeselectOverlays', menu='Edit > Selection > Deselect Overlays', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='org.scijava.ui.swing.commands.DialogPromptDemo', menu='Plugins > Sandbox > Dialog Prompt Demo', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.binary.DilateBinaryImage', menu='Process > Binary > Dilate', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.assign.DivideDataValuesBy', menu='Process > Math > Divide...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='org.scijava.plugins.commands.debug.DumpStack', menu='Plugins > Debug > Dump Stack', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.imglib.DuplicateImage', menu='Image > Duplicate', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.imglib.DuplicateImageContext', menu='Duplicate...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsEast', menu='Process > Shadows > East', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.restructure.EditAxes', menu='Image > Axes > Edit Axes...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.assign.EquationDataValues', menu='Process > Math > Equation...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.binary.ErodeBinaryImage', menu='Process > Binary > Erode', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.assign.ExpDataValues', menu='Process > Math > Exp...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.assign.FillDataValues', menu='Edit > Fill', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='org.scijava.ui.swing.commands.CommandFinder', menu='Plugins > Utilities > Find Commands...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.neigh.FindEdges', menu='Process > Find Edges', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.display.Flatten', menu='Image > Overlay > Flatten', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.restructure.FlipAxis', menu='Image > Transform > Flip Axis', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.rotate.FlipHorizontally', menu='Image > Transform > Flip Horizontally', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.rotate.FlipVertically', menu='Image > Transform > Flip Vertically', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.tools.FloodFillToolConfig', label='Flood Fill Tool', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.options.OptionsFont', menu='Edit > Options > Fonts...', priority=0.0, enabled=true, pluginType=OptionsPlugin
> [DEBUG] - class='net.imagej.plugins.commands.overlay.FromOverlayManager', menu='Image > Overlay > From Overlay Manager', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.assign.GammaDataValues', menu='Process > Math > Gamma...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.imglib.GaussianBlur', menu='Process > Filters > Gaussian Blur...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionGeometricMean', menu='Process > Noise > Noise Reduction > Geometric Mean', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionHarmonicMean', menu='Process > Noise > Noise Reduction > Harmonic Mean', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.display.HistogramPlot', menu='Analyze > Histogram Plot', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.calculator.ImageCalculator', menu='Process > Image Calculator...', iconPath='/icons/commands/calculator.png', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.io.OpenDataset', menu='File > Import > Image... ', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.io.SaveDataset', menu='File > Export > Image...  ', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.app.ImageJWebsite', menu='Help > ImageJ Website...', iconPath='/icons/commands/world_link.png', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.legacy.ImageJ2Options', label='ImageJ2 Options', menu='Edit > Options > ImageJ2...', priority=0.0, enabled=true, pluginType=OptionsPlugin
> [DEBUG] - class='net.imagej.options.OptionsInputOutput', menu='Edit > Options > Input/Output...', priority=0.0, enabled=true, pluginType=OptionsPlugin
> [DEBUG] - class='net.imagej.plugins.commands.debug.InspectImg', menu='Plugins > Debug > Inspect Image', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='org.scijava.ui.swing.commands.InspectObjects', menu='Plugins > Debug > Inspect Objects', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='org.scijava.plugins.commands.debug.InvalidCommandDemo$InvalidCommand', menu='Plugins > Debug > Invalid Command', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.assign.InvertDataValues', menu='Edit > Invert...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.lut.LUTSelector', label='LUT Selector', menu='Image > Lookup Tables > Select...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.overlay.OverlayLabels', menu='Image > Overlay > Labels...', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.options.OptionsLineWidth', menu='Edit > Options > Line Width...', priority=0.0, enabled=true, pluginType=OptionsPlugin
> [DEBUG] - class='net.imagej.plugins.commands.app.ListShortcuts', menu='Plugins > Shortcuts > List Shortcuts...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.assign.LogDataValues', menu='Process > Math > Log...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='org.scijava.ui.swing.options.OptionsLookAndFeel', menu='Edit > Options > Look and Feel...', priority=0.0, enabled=true, pluginType=OptionsPlugin
> [DEBUG] - class='net.imagej.plugins.commands.binary.MakeBinary', menu='Process > Binary > Make Binary...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.overlay.ConvertToMask', menu='Process > Binary > Make Mask Overlay...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.debug.MandelbrotSetImage', menu='Plugins > Sandbox > Mandelbrot Set', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.assign.MaxDataValues', menu='Process > Math > Max...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMax', menu='Process > Noise > Noise Reduction > Maximum', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMean', menu='Process > Noise > Noise Reduction > Mean', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.debug.MeasurementDemo', menu='Plugins > Sandbox > Measurement Demo', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMedian', menu='Process > Noise > Noise Reduction > Median', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.options.OptionsMemoryAndThreads', menu='Edit > Options > Memory & Threads...', priority=0.0, enabled=true, pluginType=OptionsPlugin
> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMidpoint', menu='Process > Noise > Noise Reduction > Midpoint', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.assign.MinDataValues', menu='Process > Math > Min...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMin', menu='Process > Noise > Noise Reduction > Minimum', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.options.OptionsMisc', menu='Edit > Options > Misc...', priority=0.0, enabled=true, pluginType=OptionsPlugin
> [DEBUG] - class='net.imagej.legacy.plugin.MixedWorldCommand', menu='Plugins > Sandbox > Mixed World Command', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.debug.MultidimImage', menu='Plugins > Sandbox > Multidimensional Test Image', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.assign.MultiplyDataValuesBy', menu='Process > Math > Multiply...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.imglib.NanBackground', menu='Process > Math > NaN Background', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.io.NewImage', label='New Image...', menu='File > New > Image...', iconPath='/icons/commands/picture.png', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNorth', menu='Process > Shadows > North', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNortheast', menu='Process > Shadows > Northeast', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNorthwest', menu='Process > Shadows > Northwest', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.assign.OrDataValuesWith', menu='Process > Math > OR...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.binary.OpenBinaryImage', menu='Process > Binary > Open', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='org.scijava.plugins.commands.io.OpenFile', menu='File > Open...', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomOriginalScale', menu='Image > Zoom > Original Scale', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.display.interactive.OrthogonalViews', menu='Image > Stacks > Orthogonal Views', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.ui.swing.commands.OverlayManager', menu='Image > Overlay > Overlay Manager', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.overlay.OverlayProperties', label='Overlay Properties...', menu='Image > Overlay > Properties...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.tools.PaintBrushToolConfig', label='Paintbrush Tool', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='org.scijava.plugins.commands.debug.ParamAssignOrder', menu='Plugins > Sandbox > Parameter Assignment Order', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.tools.PencilToolConfig', label='Pencil Tool', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='fiji.DefaultFijiService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='fiji.patches.FijiAppConfiguration', priority=0.0, enabled=true, pluginType=LegacyAppConfiguration
> [DEBUG] - class='fiji.patches.OldLegacyEditor', priority=0.0, enabled=true, pluginType=LegacyEditor
> [DEBUG] - class='fiji.patches.OldAppConfiguration', priority=0.0, enabled=true, pluginType=LegacyAppConfiguration
> [DEBUG] - class='net.imglib2.meta.units.DefaultUnitService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.ui.awt.widget.AWTObjectWidget', priority=0.0, enabled=true, pluginType=InputWidget
> [DEBUG] - class='org.scijava.ui.awt.widget.AWTToggleWidget', priority=0.0, enabled=true, pluginType=InputWidget
> [DEBUG] - class='org.scijava.ui.awt.widget.AWTChoiceWidget', priority=0.0, enabled=true, pluginType=InputWidget
> [DEBUG] - class='org.scijava.ui.awt.widget.AWTNumberWidget', priority=0.0, enabled=true, pluginType=InputWidget
> [DEBUG] - class='org.scijava.ui.awt.widget.AWTTextWidget', priority=0.0, enabled=true, pluginType=InputWidget
> [DEBUG] - class='org.scijava.ui.awt.widget.AWTFileWidget', priority=0.0, enabled=true, pluginType=InputWidget
> [DEBUG] - class='org.scijava.ui.awt.widget.AWTButtonWidget', priority=0.0, enabled=true, pluginType=InputWidget
> [DEBUG] - class='net.imagej.plugins.uploaders.ssh.SSHFileUploader', priority=0.0, enabled=true, pluginType=Uploader
> [DEBUG] - class='net.imagej.plugins.uploaders.ssh.SFTPFileUploader', priority=0.0, enabled=true, pluginType=Uploader
> [DEBUG] - class='net.imagej.plugins.uploaders.webdav.WebDAVUploader', priority=0.0, enabled=true, pluginType=Uploader
> [DEBUG] - class='org.scijava.plugins.text.markdown.MarkdownTextFormat', priority=0.0, enabled=true, pluginType=TextFormat
> [DEBUG] - class='net.imagej.ui.awt.AWTRenderingService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='net.imagej.ui.awt.AWTScreenCaptureService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.object.DefaultObjectService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.convert.DefaultConverter', priority=0.0, enabled=true, pluginType=Converter
> [DEBUG] - class='org.scijava.convert.DefaultConvertService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.input.DefaultInputService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.ui.DefaultUIService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.ui.dnd.DefaultDragAndDropService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.ui.dnd.ListDragAndDropHandler', priority=0.0, enabled=true, pluginType=DragAndDropHandler
> [DEBUG] - class='org.scijava.ui.dnd.ScriptFileDragAndDropHandler', priority=0.0, enabled=true, pluginType=DragAndDropHandler
> [DEBUG] - class='org.scijava.ui.console.UIArgument', priority=0.0, enabled=true, pluginType=ConsoleArgument
> [DEBUG] - class='org.scijava.plugin.DefaultPluginService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.text.DefaultTextService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.display.DefaultDisplayService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.prefs.DefaultPrefService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.io.DefaultRecentFileService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.io.console.OpenArgument', priority=0.0, enabled=true, pluginType=ConsoleArgument
> [DEBUG] - class='org.scijava.io.DefaultIOService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.widget.DefaultWidgetService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.menu.DefaultMenuService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.tool.DefaultToolService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.app.DefaultAppService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.app.DefaultStatusService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.module.DefaultModuleService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.welcome.DefaultWelcomeService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.thread.DefaultThreadService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.script.io.ScriptIOPlugin', priority=0.0, enabled=true, pluginType=IOPlugin
> [DEBUG] - class='org.scijava.script.DefaultScriptHeaderService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.event.DefaultEventHistory', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.platform.DefaultPlatformService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.options.DefaultOptionsService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.command.DefaultCommandService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.command.console.RunArgument', priority=0.0, enabled=true, pluginType=ConsoleArgument
> [DEBUG] - class='org.scijava.console.DefaultConsoleService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.SciJava', priority=0.0, enabled=true, pluginType=Gateway
> [DEBUG] - class='net.imagej.operator.DefaultCalculatorService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='net.imagej.autoscale.DefaultAutoscaleService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='net.imagej.sampler.DefaultSamplerService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='net.imagej.lut.io.LUTIOPlugin', priority=0.0, enabled=true, pluginType=IOPlugin
> [DEBUG] - class='net.imagej.display.DefaultDatasetView', priority=0.0, enabled=true, pluginType=DataView
> [DEBUG] - class='net.imagej.display.DefaultImageDisplay', priority=0.0, enabled=true, pluginType=Display
> [DEBUG] - class='net.imagej.display.DefaultZoomService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='net.imagej.display.DefaultOverlayService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='net.imagej.display.DefaultImageDisplayService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='net.imagej.display.DefaultOverlayView', priority=0.0, enabled=true, pluginType=DataView
> [DEBUG] - class='net.imagej.display.DefaultWindowService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='net.imagej.types.DataType32BitSignedFloat', priority=0.0, enabled=true, pluginType=DataType
> [DEBUG] - class='net.imagej.types.DataType12BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType
> [DEBUG] - class='net.imagej.types.DataType64BitSignedFloat', priority=0.0, enabled=true, pluginType=DataType
> [DEBUG] - class='net.imagej.types.DataType8BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType
> [DEBUG] - class='net.imagej.types.DataType32BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType
> [DEBUG] - class='net.imagej.types.DataType32BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType
> [DEBUG] - class='net.imagej.types.DataType64BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType
> [DEBUG] - class='net.imagej.types.DataType16BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType
> [DEBUG] - class='net.imagej.types.DataType16BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType
> [DEBUG] - class='net.imagej.types.DataType1BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType
> [DEBUG] - class='net.imagej.types.DataType8BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType
> [DEBUG] - class='net.imagej.types.DefaultDataTypeService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='net.imagej.DefaultImgPlusService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='net.imagej.minmax.DefaultMinMaxMethod', priority=0.0, enabled=true, pluginType=MinMaxMethod
> [DEBUG] - class='net.imagej.ui.DefaultImageJUIService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='net.imagej.ui.dnd.LUTFileDragAndDropHandler', priority=0.0, enabled=true, pluginType=DragAndDropHandler
> [DEBUG] - class='net.imagej.measure.DefaultStatisticsService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='net.imagej.measure.DefaultMeasurementService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='net.imagej.threshold.DefaultThresholdService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='net.imagej.animation.DefaultAnimationService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='net.imagej.table.DefaultTableDisplay', priority=0.0, enabled=true, pluginType=Display
> [DEBUG] - class='net.imagej.DefaultDatasetService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='io.scif.io.URLHandle', priority=0.0, enabled=true, pluginType=IStreamAccess
> [DEBUG] - class='io.scif.codec.LZWCodec', priority=0.0, enabled=true, pluginType=Codec
> [DEBUG] - class='io.scif.io.DefaultNIOService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='io.scif.img.converters.DefaultPlaneConverterService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='io.scif.img.cell.SCIFIOCellCacheCleaningProvider', priority=0.0, enabled=true, pluginType=RefProvider
> [DEBUG] - class='io.scif.codec.JPEG2000Codec', priority=0.0, enabled=true, pluginType=Codec
> [DEBUG] - class='io.scif.img.DefaultImgUtilityService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='io.scif.gui.DefaultGUIService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='io.scif.filters.DimensionSwapper', priority=0.0, enabled=true, pluginType=Filter
> [DEBUG] - class='io.scif.xml.DefaultXMLService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='io.scif.codec.HuffmanCodec', priority=0.0, enabled=true, pluginType=Codec
> [DEBUG] - class='io.scif.refs.DefaultRefManagerService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='io.scif.services.DefaultFormatService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='io.scif.codec.RPZACodec', priority=0.0, enabled=true, pluginType=Codec
> [DEBUG] - class='io.scif.codec.MJPBCodec', priority=0.0, enabled=true, pluginType=Codec
> [DEBUG] - class='io.scif.codec.PassthroughCodec', priority=0.0, enabled=true, pluginType=Codec
> [DEBUG] - class='io.scif.filters.PlaneSeparatorMetadata', priority=0.0, enabled=true, pluginType=MetadataWrapper
> [DEBUG] - class='io.scif.filters.ChannelFiller', priority=0.0, enabled=true, pluginType=Filter
> [DEBUG] - class='io.scif.codec.PackbitsCodec', priority=0.0, enabled=true, pluginType=Codec
> [DEBUG] - class='io.scif.filters.MinMaxFilter', priority=0.0, enabled=true, pluginType=Filter
> [DEBUG] - class='io.scif.io.BZip2Handle', priority=0.0, enabled=true, pluginType=IStreamAccess
> [DEBUG] - class='io.scif.services.DefaultTranslatorService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='io.scif.img.cell.RefMapCleaningProvider', priority=0.0, enabled=true, pluginType=RefProvider
> [DEBUG] - class='io.scif.codec.QTRLECodec', priority=0.0, enabled=true, pluginType=Codec
> [DEBUG] - class='io.scif.io.GZipHandle', priority=0.0, enabled=true, pluginType=IStreamAccess
> [DEBUG] - class='io.scif.codec.LosslessJPEGCodec', priority=0.0, enabled=true, pluginType=Codec
> [DEBUG] - class='io.scif.codec.MSVideoCodec', priority=0.0, enabled=true, pluginType=Codec
> [DEBUG] - class='io.scif.filters.PlaneSeparator', priority=0.0, enabled=true, pluginType=Filter
> [DEBUG] - class='io.scif.codec.Base64Codec', priority=0.0, enabled=true, pluginType=Codec
> [DEBUG] - class='io.scif.SCIFIO', priority=0.0, enabled=true, pluginType=Gateway
> [DEBUG] - class='io.scif.codec.DefaultCodecService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='io.scif.codec.JPEGCodec', priority=0.0, enabled=true, pluginType=Codec
> [DEBUG] - class='io.scif.img.ImgPlusCtxCleaningProvider', priority=0.0, enabled=true, pluginType=RefProvider
> [DEBUG] - class='io.scif.codec.LuraWaveCodec', priority=0.0, enabled=true, pluginType=Codec
> [DEBUG] - class='io.scif.img.cell.SCIFIOCellCleaningProvider', priority=0.0, enabled=true, pluginType=RefProvider
> [DEBUG] - class='io.scif.codec.MSRLECodec', priority=0.0, enabled=true, pluginType=Codec
> [DEBUG] - class='io.scif.img.cell.cache.MapDBCache', priority=0.0, enabled=true, pluginType=Service
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> [DEBUG] - class='io.scif.img.cell.SCIFIOCellImgCleaningProvider', priority=0.0, enabled=true, pluginType=RefProvider
> [DEBUG] - class='io.scif.filters.FileStitcher', priority=0.0, enabled=true, pluginType=Filter
> [DEBUG] - class='io.scif.services.DefaultFilePatternService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='io.scif.io.ZipHandle', priority=0.0, enabled=true, pluginType=IStreamAccess
> [DEBUG] - class='io.scif.codec.NikonCodec', priority=0.0, enabled=true, pluginType=Codec
> [DEBUG] - class='io.scif.formats.tiff.DefaultTiffService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='io.scif.services.DefaultLocationService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='io.scif.codec.ZlibCodec', priority=0.0, enabled=true, pluginType=Codec
> [DEBUG] - class='io.scif.services.JAIIIOServiceImpl', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='io.scif.formats.qt.DefaultQTJavaService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Batch', priority=0.0, enabled=true, pluginType=ConsoleArgument
> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$IJPath', priority=0.0, enabled=true, pluginType=ConsoleArgument
> [DEBUG] - class='net.imagej.legacy.plugin.LegacyAutoImporter', priority=0.0, enabled=true, pluginType=AutoImporter
> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Macro', priority=0.0, enabled=true, pluginType=ConsoleArgument
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> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Port', priority=0.0, enabled=true, pluginType=ConsoleArgument
> [DEBUG] - class='org.scijava.ui.swing.widget.SwingDateWidget', priority=0.0, enabled=true, pluginType=InputWidget
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> [DEBUG] - class='org.scijava.plugins.scripting.java.CommandJavaRunner', priority=0.0, enabled=true, pluginType=JavaRunner
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> [DEBUG] - class='net.imagej.ui.swing.mdi.viewer.SwingMdiImageDisplayViewer', priority=0.0, enabled=true, pluginType=DisplayViewer
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> [DEBUG] - class='net.imagej.updater.FileUploader', priority=0.0, enabled=true, pluginType=Uploader
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> [DEBUG] - class='net.imagej.updater.DefaultUploaderService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='net.imagej.ImageJ', priority=0.0, enabled=true, pluginType=Gateway
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> [DEBUG] - class='net.imagej.plugins.commands.dataset.LoadDataset', priority=0.0, enabled=true, pluginType=Command
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> [DEBUG] - class='net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='org.scijava.plugins.scripting.jruby.JRubyScriptHeader', priority=0.0, enabled=true, pluginType=ScriptHeader
> [DEBUG] - class='fiji.plugin.trackmate.action.TrackBranchAnalysis$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
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> [DEBUG] - class='fiji.plugin.trackmate.visualization.hyperstack.HyperStackDisplayerFactory', priority=0.0, enabled=true, pluginType=ViewFactory
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> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackBranchingAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer
> [DEBUG] - class='fiji.plugin.trackmate.action.PlotNSpotsVsTimeAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
> [DEBUG] - class='fiji.plugin.trackmate.action.ExportStatsToIJAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
> [DEBUG] - class='fiji.plugin.trackmate.features.edges.EdgeTargetAnalyzer', priority=0.0, enabled=true, pluginType=EdgeAnalyzer
> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackDurationAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer
> [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotIntensityAnalyzerFactory', priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory
> [DEBUG] - class='fiji.plugin.trackmate.features.edges.EdgeVelocityAnalyzer', priority=0.0, enabled=true, pluginType=EdgeAnalyzer
> [DEBUG] - class='fiji.plugin.trackmate.detection.LogDetectorFactory', priority=0.0, enabled=true, pluginType=SpotDetectorFactory
> [DEBUG] - class='fiji.plugin.trackmate.action.ExportTracksToXML$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
> [DEBUG] - class='fiji.plugin.trackmate.action.LinkNew3DViewerAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
> [DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.SimpleLAPTrackerFactory', priority=0.0, enabled=true, pluginType=SpotTrackerFactory
> [DEBUG] - class='fiji.plugin.trackmate.action.ResetSpotTimeFeatureAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
> [DEBUG] - class='fiji.plugin.trackmate.action.RadiusToEstimatedAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
> [DEBUG] - class='fiji.plugin.trackmate.action.IcyTrackExporter$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
> [DEBUG] - class='fiji.plugin.trackmate.action.CaptureOverlayAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
> [DEBUG] - class='fiji.plugin.trackmate.tracking.sparselap.SimpleSparseLAPTrackerFactory', priority=0.0, enabled=true, pluginType=SpotTrackerFactory
> [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotMorphologyAnalyzerFactory', priority=0.0, enabled=false, pluginType=SpotAnalyzerFactory
> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackSpotQualityFeatureAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer
> [DEBUG] - class='fiji.plugin.trackmate.action.CopyOverlayAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
> [DEBUG] - class='fiji.plugin.trackmate.tracking.sparselap.SparseLAPTrackerFactory', priority=0.0, enabled=true, pluginType=SpotTrackerFactory
> [DEBUG] - class='fiji.plugin.trackmate.detection.ManualDetectorFactory', priority=0.0, enabled=true, pluginType=SpotDetectorFactory
> [DEBUG] - class='fiji.plugin.trackmate.features.manual.ManualSpotColorAnalyzerFactory', priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory
> [DEBUG] - class='fiji.plugin.trackmate.detection.DogDetectorFactory', priority=0.0, enabled=true, pluginType=SpotDetectorFactory
> [DEBUG] - class='fiji.plugin.trackmate.action.ExtractTrackStackAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
> [DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.LAPTrackerFactory', priority=0.0, enabled=true, pluginType=SpotTrackerFactory
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> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackSpeedStatisticsAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer
> [DEBUG] - class='fiji.plugin.trackmate.detection.DownsampleLogDetectorFactory', priority=0.0, enabled=true, pluginType=SpotDetectorFactory
> [DEBUG] - class='fiji.plugin.trackmate.visualization.trackscheme.TrackSchemeFactory', priority=0.0, enabled=true, pluginType=ViewFactory
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> [DEBUG] - class='io.scif.ome.services.DefaultOMEXMLService', priority=0.0, enabled=true, pluginType=Service
> [DEBUG] - class='io.scif.ome.services.DefaultOMEMetadataService', priority=0.0, enabled=true, pluginType=Service
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> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat$OMETranslator', priority=0.0, enabled=true, pluginType=Translator
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> [DEBUG] - class='net.imagej.plugins.commands.rotate.Rotate90DegreesRight', menu='Image > Transform > Rotate 90 Degrees Right', priority=0.0, enabled=true, pluginType=Command
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> [DEBUG] - class='org.scijava.plugins.commands.debug.SystemInformation', menu='Plugins > Debug > System Information', priority=0.0, enabled=true, pluginType=Command
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> [DEBUG] - class='net.imagej.updater.PromptUserToUpdate', label='There are updates available', priority=0.0, enabled=true, pluginType=Command
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> [DEBUG] - class='org.scijava.ui.swing.mdi.WindowsTileVertical', menu='Window > Tile Vertical', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomToSelection', menu='Image > Zoom > To Selection', priority=0.0, enabled=true, pluginType=Command
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> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionTrimmedMean', menu='Process > Noise > Noise Reduction > Trimmed Mean', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.updater.CheckForUpdates', label='Up-to-date check', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.ui.swing.updater.ImageJUpdater', menu='Help > Update...', priority=0.0, enabled=true, pluginType=UpdaterUI
> [DEBUG] - class='net.imagej.plugins.commands.upload.SampleImageUploader', menu='Help > Upload Sample Image', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.zoom.Zoom100Percent', menu='Image > Zoom > View 100%', priority=0.0, enabled=true, pluginType=Command
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> [DEBUG] - class='org.scijava.ui.swing.commands.WatchEvents', menu='Plugins > Debug > Watch Events', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsWest', menu='Process > Shadows > West', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.assign.XorDataValuesWith', menu='Process > Math > XOR...', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomIn', label='Zoom In', menu='Image > Zoom > In', priority=0.0, enabled=true, pluginType=Command
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> [DEBUG] - class='net.imagej.ui.swing.script.TextEditor$BeanshellHighlighter', label='beanshell', priority=0.0, enabled=true, pluginType=SyntaxHighlighter
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> [DEBUG] - class='net.imagej.ui.swing.script.TextEditor$IJ1MacroHighlighter', label='ij1-macro', priority=0.0, enabled=true, pluginType=SyntaxHighlighter
> [DEBUG] - class='net.imagej.ui.swing.script.TextEditor$MatlabHighlighter', label='matlab', priority=0.0, enabled=true, pluginType=SyntaxHighlighter
> [DEBUG] - class='net.imagej.plugins.commands.app.EasterEgg', label='| It's a secret to everyone |', priority=0.0, enabled=true, pluginType=Command
> [DEBUG] - class='io.scif.formats.APNGFormat', name='Animated PNG', priority=0.0, enabled=true, pluginType=Format
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> [DEBUG] - class='io.scif.services.DefaultInitializeService', priority=-100.0, enabled=true, pluginType=Service
> [DEBUG] - class='io.scif.formats.AVIFormat$Translator', priority=-100.0, enabled=true, pluginType=Translator
> [DEBUG] - class='io.scif.formats.ICSFormat$ICSTranslator', priority=-100.0, enabled=true, pluginType=Translator
> [DEBUG] - class='io.scif.formats.EPSFormat$EPSTranslator', priority=-100.0, enabled=true, pluginType=Translator
> [DEBUG] - class='io.scif.formats.ImageIOFormat$ImageIOTranslator', priority=-100.0, enabled=true, pluginType=Translator
> [DEBUG] - class='io.scif.formats.qt.LegacyQTFormat$LegacyQTTranslator', priority=-100.0, enabled=true, pluginType=Translator
> [DEBUG] - class='net.imagej.legacy.plugin.DefaultLegacyOpener', priority=-100.0, enabled=true, pluginType=LegacyOpener
> [DEBUG] - class='net.imagej.legacy.plugin.DefaultLegacyEditor', priority=-100.0, enabled=true, pluginType=LegacyEditor
> [DEBUG] - class='org.scijava.plugins.scripting.java.MainJavaRunner', priority=-100.0, enabled=true, pluginType=JavaRunner
> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat$OMEXMLTranslator', priority=-100.0, enabled=true, pluginType=Translator
> [DEBUG] - class='io.scif.formats.qt.LegacyQTFormat', name='QuickTime', priority=-100.0, enabled=true, pluginType=Format
> [DEBUG] - class='org.scijava.app.SciJavaApp', name='SciJava', priority=-100.0, enabled=true, pluginType=App
> [DEBUG] - class='io.scif.formats.JPEGTileFormat', name='Tile JPEG', priority=-100.0, enabled=true, pluginType=Format
> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToNumericType', name='add', priority=-100.0, enabled=true, pluginType=Op
> [DEBUG] - class='org.scijava.ui.awt.AWTUI', name='awt', priority=-100.0, enabled=true, pluginType=UserInterface
> [DEBUG] - class='net.imagej.ops.crop.CropRAI', name='crop', aliases='slice', priority=-100.0, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ops.map.MapII2RAI', name='map', priority=-100.0, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ops.map.MapRAI2III', name='map', priority=-100.0, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ops.map.MapI', name='map', priority=-100.0, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ops.neighborhood.MapNeighborhood', name='map', priority=-100.0, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ops.statistics.MaxRealType', name='max', priority=-100.0, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ops.statistics.MeanRealType', name='mean', priority=-100.0, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ops.statistics.MedianRealType', name='median', priority=-100.0, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ops.statistics.MinRealType', name='min', priority=-100.0, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ops.project.ProjectRAI2II', name='project', priority=-100.0, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ops.misc.SizeIterableInterval', name='size', priority=-100.0, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ops.statistics.StdDevRealType', name='stddev', priority=-100.0, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ops.statistics.SumRealType', name='sum', priority=-100.0, enabled=true, pluginType=Op
> [DEBUG] - class='org.scijava.ui.swing.mdi.SwingMdiUI', name='swing-mdi', priority=-100.0, enabled=true, pluginType=UserInterface
> [DEBUG] - class='net.imagej.ops.statistics.VarianceRealType', name='variance', priority=-100.0, enabled=true, pluginType=Op
> [DEBUG] - class='org.scijava.text.io.TextIOPlugin', priority=-101.0, enabled=true, pluginType=IOPlugin
> [DEBUG] - class='net.imagej.ops.map.MapI2I', name='map', priority=-101.0, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.plugins.tools.WandTool', name='Wand', description='Wand (tracing) tool', iconPath='/icons/tools/wand.png', priority=-110.0, enabled=false, pluginType=Tool
> [DEBUG] - class='net.imagej.ui.swing.tools.SwingTextTool', name='Text', description='Text tool', iconPath='/icons/tools/text.png', priority=-115.0, enabled=false, pluginType=Tool
> [DEBUG] - class='net.imagej.plugins.tools.ZoomTool', name='Zoom', description='Magnifying glass (or use "+" and "-" keys)', iconPath='/icons/tools/zoom.png', priority=-200.0, enabled=true, pluginType=Tool
> [DEBUG] - class='net.imagej.plugins.tools.PanTool', name='Pan', description='Scrolling tool (or press space bar and drag)', iconPath='/icons/tools/pan.png', priority=-201.0, enabled=true, pluginType=Tool
> [DEBUG] - class='net.imagej.plugins.tools.PaintBrushTool', name='Paintbrush', description='Paintbrush Tool', iconPath='/icons/tools/paintbrush.png', priority=-300.0, enabled=true, pluginType=Tool
> [DEBUG] - class='net.imagej.plugins.tools.PencilTool', name='Pencil', description='Pencil Tool', iconPath='/icons/tools/pencil.png', priority=-301.0, enabled=true, pluginType=Tool
> [DEBUG] - class='net.imagej.plugins.tools.SprayCanTool', name='SprayCan', label='Spray Can', description='Spray Can Tool', iconPath='/icons/tools/spray-can.png', priority=-303.0, enabled=true, pluginType=Tool
> [DEBUG] - class='net.imagej.plugins.tools.FloodFillTool', name='FloodFill', label='Flood Fill', description='Flood Fill Tool', iconPath='/icons/tools/flood-fill.png', priority=-304.0, enabled=true, pluginType=Tool
> [DEBUG] - class='net.imagej.plugins.tools.ArrowTool', name='Arrow', description='Arrow Tool', iconPath='/icons/tools/arrow.png', priority=-305.0, enabled=false, pluginType=Tool
> [DEBUG] - class='net.imagej.plugins.tools.FgColorTool', name='Foreground', iconPath='/icons/tools/blank.png', priority=-500.0, enabled=true, pluginType=Tool
> [DEBUG] - class='net.imagej.plugins.tools.BgColorTool', name='Background', iconPath='/icons/tools/blankBlack.png', priority=-501.0, enabled=true, pluginType=Tool
> [DEBUG] - class='io.scif.ome.formats.OMETIFFFormat', priority=-9998.0, enabled=true, pluginType=Format
> [DEBUG] - class='io.scif.ome.formats.OMETIFFFormat$OMETIFFTranslator', priority=-9998.0, enabled=true, pluginType=Translator
> [DEBUG] - class='org.scijava.module.process.LoadInputsPreprocessor', priority=-9999.0, enabled=true, pluginType=PreprocessorPlugin
> [DEBUG] - class='io.scif.formats.TIFFFormat$TIFFTranslator', priority=-9999.0, enabled=true, pluginType=Translator
> [DEBUG] - class='io.scif.formats.TIFFFormat', name='Tagged Image File Format', priority=-9999.0, enabled=true, pluginType=Format
> [DEBUG] - class='org.scijava.ui.FilePreprocessor', priority=-9999.5, enabled=true, pluginType=PreprocessorPlugin
> [DEBUG] - class='org.scijava.ui.awt.widget.AWTInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin
> [DEBUG] - class='org.scijava.plugins.text.plain.PlainTextFormat', priority=-10000.0, enabled=true, pluginType=TextFormat
> [DEBUG] - class='org.scijava.display.DisplayPostprocessor', priority=-10000.0, enabled=true, pluginType=PostprocessorPlugin
> [DEBUG] - class='io.scif.DefaultTranslator', priority=-10000.0, enabled=true, pluginType=Translator
> [DEBUG] - class='net.imagej.legacy.ui.LegacyInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin
> [DEBUG] - class='org.scijava.ui.swing.widget.SwingInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin
> [DEBUG] - class='org.scijava.ui.swing.widget.SwingMdiInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin
> [DEBUG] - class='net.imagej.ui.swing.overlay.DefaultJHotDrawAdapter', priority=-10000.0, enabled=true, pluginType=JHotDrawAdapter
> [DEBUG] - class='org.scijava.platform.DefaultPlatform', name='Default', priority=-10000.0, enabled=true, pluginType=Platform
> [DEBUG] - class='net.imagej.plugins.tools.AcceleratorHandler', name='Keyboard Shortcuts', priority=-10000.0, enabled=true, pluginType=Tool
> [DEBUG] - class='io.scif.formats.MinimalTIFFFormat', name='Minimal TIFF', priority=-10000.0, enabled=true, pluginType=Format
> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToImageFunctional', name='add', priority=-10000.0, enabled=true, pluginType=Op
> [DEBUG] - class='net.imagej.ops.chunker.InterleavedChunker', name='chunker', priority=-10000.0, enabled=true, pluginType=Op
> [DEBUG] - class='org.scijava.module.process.CheckInputsPreprocessor', priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin
> [DEBUG] - class='org.scijava.module.process.SaveInputsPreprocessor', priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin
> [DEBUG] - class='io.scif.formats.TIFFJAIFormat', name='Tagged Image File Format', priority=-10001.0, enabled=true, pluginType=Format
> [DEBUG] - class='net.imagej.ops.misc.SizeIterable', name='size', priority=-Infinity, enabled=true, pluginType=Op
> [DEBUG] Created service 'org.scijava.plugin.DefaultPluginService' in 51 ms
> [DEBUG] Creating service: org.scijava.object.DefaultObjectService
> log4j:WARN No appenders could be found for logger (org.bushe.swing.event.EventService).
> log4j:WARN Please initialize the log4j system properly.
> log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info.
> [DEBUG] Created service 'org.scijava.object.DefaultObjectService' in 72 ms
> [DEBUG] Creating service: org.scijava.module.DefaultModuleService
> [DEBUG] Creating service: org.scijava.prefs.DefaultPrefService
> [DEBUG] Created service 'org.scijava.prefs.DefaultPrefService' in 4 ms
> [DEBUG] Creating service: org.scijava.convert.DefaultConvertService
> [DEBUG] Created service 'org.scijava.convert.DefaultConvertService' in 4 ms
> [DEBUG] Created service 'org.scijava.module.DefaultModuleService' in 14 ms
> [DEBUG] Creating service: org.scijava.command.DefaultCommandService
> [DEBUG] Created service 'org.scijava.command.DefaultCommandService' in 36 ms
> [DEBUG] Created service 'org.scijava.script.DefaultScriptService' in 184 ms
> [DEBUG] Creating service: net.imagej.lut.DefaultLUTService
> [DEBUG] Creating service: net.imagej.DefaultDatasetService
> [DEBUG] Creating service: io.scif.services.DefaultFormatService
> [DEBUG] Created service 'io.scif.services.DefaultFormatService' in 3 ms
> [DEBUG] Creating service: net.imagej.types.DefaultDataTypeService
> [INFO] Found 11 DataType plugins.
> [DEBUG] Created service 'net.imagej.types.DefaultDataTypeService' in 40 ms
> [DEBUG] Created service 'net.imagej.DefaultDatasetService' in 61 ms
> [DEBUG] Creating service: org.scijava.display.DefaultDisplayService
> [DEBUG] Created service 'org.scijava.display.DefaultDisplayService' in 5 ms
> [DEBUG] Creating service: net.imagej.display.DefaultImageDisplayService
> [DEBUG] Created service 'net.imagej.display.DefaultImageDisplayService' in 3 ms
> [DEBUG] Created service 'net.imagej.lut.DefaultLUTService' in 74 ms
> [DEBUG] Creating service: net.imagej.legacy.DefaultLegacyService
> [DEBUG] Creating service: net.imagej.display.DefaultOverlayService
> [DEBUG] Creating service: org.scijava.options.DefaultOptionsService
> [DEBUG] Created service 'org.scijava.options.DefaultOptionsService' in 2 ms
> [DEBUG] Creating service: net.imagej.ui.awt.AWTRenderingService
> [DEBUG] Created service 'net.imagej.ui.awt.AWTRenderingService' in 1 ms
> [DEBUG] Created service 'net.imagej.display.DefaultOverlayService' in 10 ms
> [DEBUG] Creating service: net.imagej.threshold.DefaultThresholdService
> [DEBUG] Created service 'net.imagej.threshold.DefaultThresholdService' in 4 ms
> [DEBUG] Creating service: org.scijava.menu.DefaultMenuService
> [DEBUG] Created service 'org.scijava.menu.DefaultMenuService' in 3 ms
> [DEBUG] Creating service: org.scijava.app.DefaultStatusService
> [DEBUG] Creating service: org.scijava.app.DefaultAppService
> [DEBUG] Created service 'org.scijava.app.DefaultAppService' in 4 ms
> [DEBUG] Created service 'org.scijava.app.DefaultStatusService' in 5 ms
> [INFO] Found 8 ScriptLanguage plugins.
> [INFO] Found 0 scripts
> [INFO] Overriding Upload Sample Image; identifier: command:net.imagej.plugins.commands.upload.SampleImageUploader; jar: file:/opt/Fiji.app/jars/imagej-plugins-commands-0.2.6.jar
> [INFO] Overriding Test FlowCam; identifier: script:/opt/Fiji.app/plugins/FlowCam/Test_FlowCam.ijm; jar: file:/opt/Fiji.app/jars/scijava-common-2.33.0.jar
> [DEBUG] Created service 'net.imagej.legacy.DefaultLegacyService' in 685 ms
> [DEBUG] Creating service: fiji.DefaultFijiService
> [DEBUG] Created service 'fiji.DefaultFijiService' in 1 ms
> [DEBUG] Creating service: net.imglib2.meta.units.DefaultUnitService
> [DEBUG] Created service 'net.imglib2.meta.units.DefaultUnitService' in 44 ms
> [DEBUG] Creating service: net.imagej.ui.awt.AWTScreenCaptureService
> [DEBUG] Created service 'net.imagej.ui.awt.AWTScreenCaptureService' in 2 ms
> [DEBUG] Creating service: org.scijava.input.DefaultInputService
> [DEBUG] Created service 'org.scijava.input.DefaultInputService' in 6 ms
> [DEBUG] Creating service: org.scijava.ui.DefaultUIService
> [DEBUG] Creating service: org.scijava.platform.DefaultPlatformService
> [DEBUG] Creating service: org.scijava.platform.DefaultAppEventService
> [DEBUG] Created service 'org.scijava.platform.DefaultAppEventService' in 2 ms
> [INFO] Found 1 Platform plugins.
> [DEBUG] Configuring platform: org.scijava.platform.DefaultPlatform
> [DEBUG] Created service 'org.scijava.platform.DefaultPlatformService' in 11 ms
> [DEBUG] Creating service: org.scijava.tool.DefaultToolService
> [DEBUG] Created service 'org.scijava.tool.DefaultToolService' in 5 ms
> [DEBUG] Created service 'org.scijava.ui.DefaultUIService' in 23 ms
> [DEBUG] Creating service: org.scijava.ui.dnd.DefaultDragAndDropService
> [DEBUG] Created service 'org.scijava.ui.dnd.DefaultDragAndDropService' in 5 ms
> [DEBUG] Creating service: org.scijava.text.DefaultTextService
> [DEBUG] Created service 'org.scijava.text.DefaultTextService' in 3 ms
> [DEBUG] Creating service: org.scijava.io.DefaultRecentFileService
> [DEBUG] Created service 'org.scijava.io.DefaultRecentFileService' in 61 ms
> [DEBUG] Creating service: org.scijava.io.DefaultIOService
> [DEBUG] Created service 'org.scijava.io.DefaultIOService' in 4 ms
> [DEBUG] Creating service: org.scijava.widget.DefaultWidgetService
> [INFO] Found 22 InputWidget plugins.
> [DEBUG] Created service 'org.scijava.widget.DefaultWidgetService' in 6 ms
> [DEBUG] Creating service: org.scijava.welcome.DefaultWelcomeService
> [DEBUG] Created service 'org.scijava.welcome.DefaultWelcomeService' in 2 ms
> [DEBUG] Creating service: org.scijava.script.DefaultScriptHeaderService
> [DEBUG] Created service 'org.scijava.script.DefaultScriptHeaderService' in 2 ms
> [DEBUG] Creating service: org.scijava.event.DefaultEventHistory
> [DEBUG] Created service 'org.scijava.event.DefaultEventHistory' in 2 ms
> [DEBUG] Creating service: org.scijava.console.DefaultConsoleService
> [DEBUG] Created service 'org.scijava.console.DefaultConsoleService' in 2 ms
> [DEBUG] Creating service: net.imagej.operator.DefaultCalculatorService
> [DEBUG] Created service 'net.imagej.operator.DefaultCalculatorService' in 2 ms
> [DEBUG] Creating service: net.imagej.autoscale.DefaultAutoscaleService
> [DEBUG] Created service 'net.imagej.autoscale.DefaultAutoscaleService' in 3 ms
> [DEBUG] Creating service: net.imagej.sampler.DefaultSamplerService
> [DEBUG] Created service 'net.imagej.sampler.DefaultSamplerService' in 3 ms
> [DEBUG] Creating service: net.imagej.display.DefaultZoomService
> [DEBUG] Created service 'net.imagej.display.DefaultZoomService' in 2 ms
> [DEBUG] Creating service: net.imagej.display.DefaultWindowService
> [DEBUG] Created service 'net.imagej.display.DefaultWindowService' in 2 ms
> [DEBUG] Creating service: net.imagej.DefaultImgPlusService
> [DEBUG] Created service 'net.imagej.DefaultImgPlusService' in 1 ms
> [DEBUG] Creating service: net.imagej.ui.DefaultImageJUIService
> [DEBUG] Created service 'net.imagej.ui.DefaultImageJUIService' in 1 ms
> [DEBUG] Creating service: net.imagej.measure.DefaultStatisticsService
> [DEBUG] Created service 'net.imagej.measure.DefaultStatisticsService' in 3 ms
> [DEBUG] Creating service: net.imagej.measure.DefaultMeasurementService
> [DEBUG] Created service 'net.imagej.measure.DefaultMeasurementService' in 1 ms
> [DEBUG] Creating service: net.imagej.animation.DefaultAnimationService
> [DEBUG] Created service 'net.imagej.animation.DefaultAnimationService' in 4 ms
> [DEBUG] Creating service: io.scif.io.DefaultNIOService
> [DEBUG] Created service 'io.scif.io.DefaultNIOService' in 2 ms
> [DEBUG] Creating service: io.scif.img.converters.DefaultPlaneConverterService
> [DEBUG] Created service 'io.scif.img.converters.DefaultPlaneConverterService' in 6 ms
> [DEBUG] Creating service: io.scif.img.DefaultImgUtilityService
> [DEBUG] Created service 'io.scif.img.DefaultImgUtilityService' in 5 ms
> [DEBUG] Creating service: io.scif.gui.DefaultGUIService
> [DEBUG] Created service 'io.scif.gui.DefaultGUIService' in 3 ms
> [DEBUG] Creating service: io.scif.xml.DefaultXMLService
> [DEBUG] Created service 'io.scif.xml.DefaultXMLService' in 22 ms
> [DEBUG] Creating service: io.scif.refs.DefaultRefManagerService
> [DEBUG] Created service 'io.scif.refs.DefaultRefManagerService' in 1 ms
> [DEBUG] Creating service: io.scif.services.DefaultTranslatorService
> [DEBUG] Created service 'io.scif.services.DefaultTranslatorService' in 2 ms
> [DEBUG] Creating service: io.scif.codec.DefaultCodecService
> [DEBUG] Created service 'io.scif.codec.DefaultCodecService' in 1 ms
> [DEBUG] Creating service: io.scif.img.cell.cache.MapDBCache
> [DEBUG] Created service 'io.scif.img.cell.cache.MapDBCache' in 8 ms
> [DEBUG] Creating service: io.scif.DefaultMetadataService
> [DEBUG] Created service 'io.scif.DefaultMetadataService' in 0 ms
> [DEBUG] Creating service: io.scif.services.DefaultFilePatternService
> [DEBUG] Created service 'io.scif.services.DefaultFilePatternService' in 2 ms
> [DEBUG] Creating service: io.scif.formats.tiff.DefaultTiffService
> [DEBUG] Created service 'io.scif.formats.tiff.DefaultTiffService' in 3 ms
> [DEBUG] Creating service: io.scif.services.DefaultLocationService
> [DEBUG] Created service 'io.scif.services.DefaultLocationService' in 1 ms
> [DEBUG] Creating service: io.scif.services.JAIIIOServiceImpl
> [DEBUG] Created service 'io.scif.services.JAIIIOServiceImpl' in 24 ms
> [DEBUG] Creating service: io.scif.formats.qt.DefaultQTJavaService
> [DEBUG] Created service 'io.scif.formats.qt.DefaultQTJavaService' in 5 ms
> [DEBUG] Creating service: org.scijava.ui.swing.SwingIconService
> [DEBUG] Created service 'org.scijava.ui.swing.SwingIconService' in 3 ms
> [DEBUG] Creating service: org.scijava.plugins.scripting.java.DefaultJavaService
> [DEBUG] Created service 'org.scijava.plugins.scripting.java.DefaultJavaService' in 2 ms
> [DEBUG] Creating service: net.imagej.ui.swing.overlay.JHotDrawService
> [DEBUG] Created service 'net.imagej.ui.swing.overlay.JHotDrawService' in 3 ms
> [DEBUG] Creating service: net.imagej.updater.DefaultUpdateService
> [DEBUG] Created service 'net.imagej.updater.DefaultUpdateService' in 7 ms
> [DEBUG] Creating service: net.imagej.updater.DefaultUploaderService
> [DEBUG] Created service 'net.imagej.updater.DefaultUploaderService' in 1 ms
> [DEBUG] Creating service: net.imagej.ops.DefaultOpService
> [DEBUG] Creating service: net.imagej.ops.DefaultOpMatchingService
> [DEBUG] Created service 'net.imagej.ops.DefaultOpMatchingService' in 2 ms
> [DEBUG] Created service 'net.imagej.ops.DefaultOpService' in 5 ms
> [DEBUG] Creating service: net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor
> [DEBUG] Created service 'net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor' in 1 ms
> [DEBUG] Creating service: io.scif.ome.services.DefaultOMEXMLService
> [DEBUG] Created service 'io.scif.ome.services.DefaultOMEXMLService' in 30 ms
> [DEBUG] Creating service: io.scif.ome.services.DefaultOMEMetadataService
> [DEBUG] Created service 'io.scif.ome.services.DefaultOMEMetadataService' in 11 ms
> [DEBUG] Creating service: net.imagej.display.DummyScreenCaptureService
> [DEBUG] Created service 'net.imagej.display.DummyScreenCaptureService' in 0 ms
> [DEBUG] Creating service: net.imagej.render.DummyRenderingService
> [DEBUG] Created service 'net.imagej.render.DummyRenderingService' in 1 ms
> [DEBUG] Creating service: io.scif.services.DefaultInitializeService
> [DEBUG] Created service 'io.scif.services.DefaultInitializeService' in 3 ms
> [DEBUG] Received command line arguments:
> [DEBUG] publish(
> context = org.scijava.Context@7c92eb86
> consumed = false,null,null), called from non-EDT Thread:null
> [DEBUG] -port7
> [DEBUG] -macro
> [DEBUG] /home/btupper/hello.ijm
> [DEBUG] -batch
> [INFO] Found 11 ConsoleArgument plugins.
> [ERROR] Skipping unsupported option -port7
> [DEBUG] publish(
> context = org.scijava.Context@7c92eb86
> consumed = false,null,null), called from non-EDT Thread:null
> [INFO] Discovered user interface: net.imagej.legacy.ui.LegacyUI
> [INFO] Discovered user interface: org.scijava.ui.swing.sdi.SwingSDIUI
> [INFO] Discovered user interface: org.scijava.ui.awt.AWTUI
> [INFO] Discovered user interface: org.scijava.ui.swing.mdi.SwingMdiUI
> [btupper@fcm-flow ~]$

--
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Re: Warning/Error using Fiji on linux

BenTupper
On Dec 16, 2014, at 7:19 PM, Rasband, Wayne (NIH/NIMH) [E] <[hidden email]> wrote:

> On Dec 16, 2014, at 3:11 PM, Ben Tupper <[hidden email]> wrote:
>>
>> Hello,
>>
>> I'm learning to use Fiji in a headless CentOS 6 environment.  I first updated fiji using...
>>
>> $ fiji --update update
>>
>>
>> I have a simple macro, '~/hello.ijm', adapted from this one... http://rsb.info.nih.gov/ij/macros/SaveTextFileDemo.txt
>>
>> //
>> //START ~/hello.ijm
>> //
>> f = File.open("/home/btupper/hello.txt");
>> // use d2s() function (double to string) to specify decimal places
>> for (i=0; i<=2*PI; i+=0.01)
>>   print(f, d2s(i,6) + "  \t" + d2s(sin(i),6) + " \t" + d2s(cos(i),6));
>> //
>> //FINISH ~/hello.ijm
>> //
>>
>> I then run the macro from the command line. The macro successfully creates and populates the '~/hello.txt' file.  However, I get log4j warnings and an error as shown below.  (Note, I have pasted in below the entire output when I set the --debug flag.)
>
> You should report this bug using Fiji’s Help>Report a Bug command. The bug report will automatically provide more information about your setup and it will help the Fiji developers keep track of your bug report so that it is not forgotten. http://imagej.net/Bugs
>
> -wayne
>
>> [btupper@fcm-flow ~]$ fiji --headless -macro /home/btupper/hello.ijm
>> log4j:WARN No appenders could be found for logger (org.bushe.swing.event.EventService).
>> log4j:WARN Please initialize the log4j system properly.
>> log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info.
>> [ERROR] Skipping unsupported option -port7
>>
>> Here is a bit more info about the Fiji installation.  
>>
>> [btupper@fcm-flow ~]$ fiji --print-java-home
>> /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24/
>> [btupper@fcm-flow ~]$ fiji --print-ij-dir
>> /opt/Fiji.app
>>
>>
>> Do I need to worry about the warnings?  I can't locate any instructions for initializing log4j on the Fiji website.  I have found these 3rd party instructions [ http://www.javabeat.net/baisc-steps-to-configure-log4j-using-xml-and-properties-file/ ] but I have no idea if the are appropriate for what Fiji requires.  
>>
>> I also have no idea how to resolve the error.  
>>

Ah - will do.  I assumed that it was something in my own setup - I just noticed that log4j is distributed with Fiji in the Fiji/jars subdirectory.


>> Any suggestions?
>>
>> Thanks!
>> Ben
>>
>>
>> P.S. Below is the command and output with --debug set
>>
>> [btupper@fcm-flow ~]$ fiji --debug --headless -macro /home/btupper/hello.ijm
>> Available RAM: 3727MB, using 3/4 of that: 2796MB
>> JRE not found in '/opt/Fiji.app/jre'
>> JAVA_HOME contains a JRE: '/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre'
>> Re-executing with correct library lookup path (/opt/Fiji.app/lib/linux64:/opt/Fiji.app/mm/linux64)
>> Available RAM: 3727MB, using 3/4 of that: 2796MB
>> JRE not found in '/opt/Fiji.app/jre'
>> JAVA_HOME contains a JRE: '/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre'
>> Appending missing -batch flag for headless operation.
>> java -Dpython.cachedir.skip=true -Dplugins.dir=/opt/Fiji.app -Xmx2796m -Djava.awt.headless=true -Dapple.awt.UIElement=true -Xincgc -XX:PermSize=128m -Dsun.java.command=ImageJ -Djava.class.path=/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar -Dimagej.dir=/opt/Fiji.app -Dij.dir=/opt/Fiji.app -Dfiji.dir=/opt/Fiji.app -Dfiji.defaultLibPath=lib/amd64/server/libjvm.so -Dfiji.executable=/opt/Fiji.app/fiji-linux64 -Dij.executable=/opt/Fiji.app/fiji-linux64 -Djava.library.path=/opt/Fiji.app/lib/linux64:/opt/Fiji.app/mm/linux64 -Dij.debug=true -Dscijava.log.level=debug net.imagej.launcher.ClassLauncher -classpath /opt/Fiji.app/jars/ij-1.49m.jar fiji.Main -port7 -macro /home/btupper/hello.ijm -batch
>> Using JAVA_HOME /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre
>> Opening Java library /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre/lib/amd64/server/libjvm.so
>> Adding option: -Djava.home=/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24/
>> Launching main class fiji.Main with parameters [-port7, -macro, /home/btupper/hello.ijm, -batch]
>> Class loader = sun.misc.Launcher$AppClassLoader@b92d342
>> ij1.plugin.dirs: null
>> $HOME/.plugins: /home/btupper/.plugins does not exist
>> Launching main class net.imagej.Main with parameters [-port7, -macro, /home/btupper/hello.ijm, -batch]
>> Class loader = sun.misc.Launcher$AppClassLoader@b92d342
>> Checking class loader: sun.misc.Launcher$AppClassLoader@b92d342
>> Checking URL: file:/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar
>> Not Eclipse because first entry is: file:/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar
>> [DEBUG] Creating service: org.scijava.event.DefaultEventService
>> [DEBUG] Creating service: org.scijava.log.StderrLogService
>> [DEBUG] Created service 'org.scijava.log.StderrLogService' in 2 ms
>> [DEBUG] Creating service: org.scijava.thread.DefaultThreadService
>> [DEBUG] Created service 'org.scijava.thread.DefaultThreadService' in 1 ms
>> [DEBUG] Created service 'org.scijava.event.DefaultEventService' in 47 ms
>> [DEBUG] Creating service: org.scijava.script.DefaultScriptService
>> [DEBUG] Creating service: org.scijava.plugin.DefaultPluginService
>> [INFO] Found 777 plugins.
>> [DEBUG] - class='org.scijava.module.process.DebugPreprocessor', priority=Infinity, enabled=true, pluginType=PreprocessorPlugin
>> [DEBUG] - class='org.scijava.module.process.DebugPostprocessor', priority=Infinity, enabled=true, pluginType=PostprocessorPlugin
>> [DEBUG] - class='net.imagej.plugins.tools.KonamiHandler', name='Konami', priority=Infinity, enabled=true, pluginType=Tool
>> [DEBUG] - class='org.scijava.event.DefaultEventService', priority=100000.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.module.process.ValidityPreprocessor', priority=10001.0, enabled=true, pluginType=PreprocessorPlugin
>> [DEBUG] - class='org.scijava.ui.UIPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
>> [DEBUG] - class='org.scijava.display.ActiveDisplayPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
>> [DEBUG] - class='org.scijava.module.process.GatewayPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
>> [DEBUG] - class='org.scijava.module.process.ServicePreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
>> [DEBUG] - class='net.imagej.display.ActiveImagePreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
>> [DEBUG] - class='net.imagej.legacy.plugin.ActiveImagePlusPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
>> [DEBUG] - class='io.scif.bf.BioFormatsFormat', name='Bio-Formats Compatibility Format', priority=10000.0, enabled=true, pluginType=Format
>> [DEBUG] - class='net.imagej.ops.slicer.SlicewiseRAI2RAI', name='slicemapper', priority=10000.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.arithmetic.add.parallel.AddConstantToArrayDoubleImageP', name='add', priority=111.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.arithmetic.add.parallel.AddConstantToArrayByteImageP', name='add', priority=110.0, enabled=true, pluginType=Op
>> [DEBUG] - class='io.scif.ome.translators.OMETIFFTranslator$OMEtoOMETIFFTranslator', priority=101.0, enabled=true, pluginType=ToOMETranslator
>> [DEBUG] - class='io.scif.ome.translators.OMETIFFTranslator$OMETIFFtoOMETranslator', priority=101.0, enabled=true, pluginType=FromOMETranslator
>> [DEBUG] - class='io.scif.bf.ome.BioFormatsTranslator$BioFormatsOMETranslator', priority=101.0, enabled=true, pluginType=ToOMETranslator
>> [DEBUG] - class='net.imagej.app.ToplevelImageJApp', name='ImageJ', priority=101.0, enabled=true, pluginType=App
>> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToArrayDoubleImage', name='add', priority=101.0, enabled=true, pluginType=Op
>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTMessageWidget', priority=100.0, enabled=true, pluginType=InputWidget
>> [DEBUG] - class='org.scijava.module.process.InitPreprocessor', priority=100.0, enabled=true, pluginType=PreprocessorPlugin
>> [DEBUG] - class='org.scijava.script.DefaultScriptService', priority=100.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.lut.DefaultLUTService', priority=100.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.legacy.display.LegacyImageDisplayViewer', priority=100.0, enabled=true, pluginType=DisplayViewer
>> [DEBUG] - class='net.imagej.legacy.display.LegacyTextDisplayViewer', priority=100.0, enabled=true, pluginType=DisplayViewer
>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingMessageWidget', priority=100.0, enabled=true, pluginType=InputWidget
>> [DEBUG] - class='net.imagej.ui.swing.overlay.RectangleJHotDrawAdapter', priority=100.0, enabled=true, pluginType=JHotDrawAdapter
>> [DEBUG] - class='net.imagej.ui.swing.overlay.ThresholdJHotDrawAdapter', priority=100.0, enabled=true, pluginType=JHotDrawAdapter
>> [DEBUG] - class='io.scif.ome.translators.BMPTranslator$BMPOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
>> [DEBUG] - class='io.scif.ome.translators.MicromanagerTranslator$MicromanagerOMETranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator
>> [DEBUG] - class='io.scif.ome.translators.OBFTranslator$OBFOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
>> [DEBUG] - class='io.scif.ome.translators.TIFFTranslator$TIFFOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
>> [DEBUG] - class='io.scif.ome.translators.TIFFTranslator$OMETIFFTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator
>> [DEBUG] - class='io.scif.ome.translators.APNGTranslator$OMEAPNGTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator
>> [DEBUG] - class='io.scif.ome.translators.APNGTranslator$APNGOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
>> [DEBUG] - class='io.scif.ome.translators.ICSTranslator$OMEICSTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator
>> [DEBUG] - class='io.scif.ome.translators.ICSTranslator$ICSOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
>> [DEBUG] - class='io.scif.ome.translators.DICOMTranslator$DICOMOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
>> [DEBUG] - class='io.scif.ome.translators.NRRDTranslator$NRRDOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
>> [DEBUG] - class='io.scif.ome.translators.EPSTranslator$OMEEPSTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator
>> [DEBUG] - class='net.imagej.operator.OpAdd', name='Add', priority=100.0, enabled=true, pluginType=CalculatorOp
>> [DEBUG] - class='net.imagej.app.ImageJApp', name='ImageJ', priority=100.0, enabled=true, pluginType=App
>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingRectangleTool', name='Rectangle', description='Rectangular overlays', iconPath='/icons/tools/rectangle.png', priority=100.0, enabled=true, pluginType=Tool
>> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToArrayByteImage', name='add', priority=100.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$AddOp', name='add', priority=100.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$DivideOp', name='divide', priority=100.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.legacy.ui.LegacyUI', name='legacy', priority=100.0, enabled=true, pluginType=UserInterface
>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$MultiplyOp', name='multiply', priority=100.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$SubtractOp', name='subtract', priority=100.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ui.swing.overlay.EllipseJHotDrawAdapter', priority=99.0, enabled=true, pluginType=JHotDrawAdapter
>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingEllipseTool', name='Oval', description='Oval selections', iconPath='/icons/tools/oval.png', priority=99.0, enabled=true, pluginType=Tool
>> [DEBUG] - class='net.imagej.operator.OpSubtract', name='Subtract', priority=99.0, enabled=true, pluginType=CalculatorOp
>> [DEBUG] - class='net.imagej.ui.swing.overlay.GeneralPathJHotDrawAdapter', priority=98.5, enabled=true, pluginType=JHotDrawAdapter
>> [DEBUG] - class='net.imagej.ui.swing.overlay.PolygonJHotDrawAdapter', priority=98.0, enabled=true, pluginType=JHotDrawAdapter
>> [DEBUG] - class='net.imagej.operator.OpMultiply', name='Multiply', priority=98.0, enabled=true, pluginType=CalculatorOp
>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPolygonTool', name='Polygon', description='Polygon overlays', iconPath='/icons/tools/polygon.png', priority=98.0, enabled=true, pluginType=Tool
>> [DEBUG] - class='net.imagej.ui.swing.overlay.LineJHotDrawAdapter', priority=97.0, enabled=true, pluginType=JHotDrawAdapter
>> [DEBUG] - class='net.imagej.operator.OpDivide', name='Divide', priority=97.0, enabled=true, pluginType=CalculatorOp
>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingLineTool', name='Line', description='Straight line overlays', iconPath='/icons/tools/line.png', priority=97.0, enabled=true, pluginType=Tool
>> [DEBUG] - class='net.imagej.ui.swing.overlay.PolylineJHotDrawAdapter', priority=96.0, enabled=true, pluginType=JHotDrawAdapter
>> [DEBUG] - class='net.imagej.operator.OpAnd', name='AND', priority=96.0, enabled=true, pluginType=CalculatorOp
>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPolylineTool', name='Polyline', description='Polyline overlays', iconPath='/icons/tools/polyline.png', priority=96.0, enabled=true, pluginType=Tool
>> [DEBUG] - class='net.imagej.ui.swing.overlay.AngleJHotDrawAdapter', priority=95.0, enabled=true, pluginType=JHotDrawAdapter
>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingAngleTool', name='Angle', description='Angle overlays', iconPath='/icons/tools/angle.png', priority=95.0, enabled=true, pluginType=Tool
>> [DEBUG] - class='net.imagej.operator.OpOr', name='OR', priority=95.0, enabled=true, pluginType=CalculatorOp
>> [DEBUG] - class='net.imagej.ui.swing.overlay.PointJHotDrawOverlay', priority=94.0, enabled=true, pluginType=JHotDrawAdapter
>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPointTool', name='Point', description='Point overlays', iconPath='/icons/tools/point.png', priority=94.0, enabled=true, pluginType=Tool
>> [DEBUG] - class='net.imagej.operator.OpXor', name='XOR', priority=94.0, enabled=true, pluginType=CalculatorOp
>> [DEBUG] - class='net.imagej.operator.OpMin', name='Min', priority=93.0, enabled=true, pluginType=CalculatorOp
>> [DEBUG] - class='net.imagej.operator.OpMax', name='Max', priority=92.0, enabled=true, pluginType=CalculatorOp
>> [DEBUG] - class='net.imagej.operator.OpAverage', name='Average', priority=91.0, enabled=true, pluginType=CalculatorOp
>> [DEBUG] - class='net.imagej.operator.OpDifference', name='Difference', priority=90.0, enabled=true, pluginType=CalculatorOp
>> [DEBUG] - class='net.imagej.operator.OpCopy', name='Copy', priority=89.0, enabled=true, pluginType=CalculatorOp
>> [DEBUG] - class='net.imagej.operator.OpTransparentZero', name='Transparent-zero', priority=88.0, enabled=true, pluginType=CalculatorOp
>> [DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.FastLAPTrackerFactory', priority=10.0, enabled=true, pluginType=SpotTrackerFactory
>> [DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.SimpleFastLAPTrackerFactory', priority=10.0, enabled=true, pluginType=SpotTrackerFactory
>> [DEBUG] - class='net.imagej.legacy.DefaultLegacyService', priority=1.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingChoiceRadioWidget', priority=1.0, enabled=true, pluginType=InputWidget
>> [DEBUG] - class='net.imagej.ops.onthefly.JavassistOptimizer', priority=1.0, enabled=true, pluginType=Optimizer
>> [DEBUG] - class='fiji.plugin.trackmate.visualization.threedviewer.SpotDisplayer3DFactory', priority=1.0, enabled=true, pluginType=ViewFactory
>> [DEBUG] - class='fiji.plugin.trackmate.tracking.kdtree.NearestNeighborTrackerFactory', priority=1.0, enabled=true, pluginType=SpotTrackerFactory
>> [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotContrastAndSNRAnalyzerFactory', priority=1.0, enabled=true, pluginType=SpotAnalyzerFactory
>> [DEBUG] - class='net.imagej.ops.invert.InvertII', name='invert', priority=1.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToDouble', name='add', priority=0.6, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToLong', name='add', priority=0.5, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToFloat', name='add', priority=0.4, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToInteger', name='add', priority=0.3, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToShort', name='add', priority=0.2, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToByte', name='add', priority=0.1, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.plugins.commands.assign.AndDataValuesWith', menu='Process > Math > AND...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.app.AboutImageJ', label='About ImageJ...', menu='Help > About ImageJ...', iconPath='/icons/commands/information.png', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.AbsDataValues', menu='Process > Math > Abs...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionAdaptiveMedian', menu='Process > Noise > Noise Reduction > Adaptive Median', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.restructure.AddAxis', menu='Image > Axes > Add Axis...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.restructure.AddData', menu='Image > Data > Add Data...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.overlay.AddImage', menu='Image > Overlay > Add Image', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.AddNoiseToDataValues', menu='Process > Noise > Add Noise...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.AddSpecifiedNoiseToDataValues', menu='Process > Noise > Add Specified Noise...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.AddToDataValues', menu='Process > Math > Add...', iconPath='/icons/commands/sum.png', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionAlphaTrimmedMean', menu='Process > Noise > Noise Reduction > Alpha Trimmed Mean', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.animation.AnimationOptions', menu='Image > Animation > Animation Options...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.options.OptionsAppearance', menu='Edit > Options > Appearance...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>> [DEBUG] - class='net.imagej.ops.commands.threshold.GlobalThresholder', menu='Image > Threshold > Apply Threshold', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.options.OptionsArrowTool', menu='Edit > Options > Arrow Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>> [DEBUG] - class='net.imagej.plugins.commands.display.AutoContrast', menu='Image > Adjust > Auto-Contrast', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.axispos.AxisPositionBackward', menu='Image > Axes > Axis Position Backward', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.axispos.AxisPositionForward', menu='Image > Axes > Axis Position Forward', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.misc.Benchmark', menu='Plugins > Utilities > Benchmark', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.imglib.Binner', menu='Image > Transform > Bin...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.binary.Binarize', menu='Process > Binary > Binarize...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.display.interactive.BrightnessContrast', menu='Image > Adjust > Brightness/Contrast...', iconPath='/icons/commands/contrast.png', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.debug.ButtonDemo', menu='Plugins > Sandbox > Button Demo', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.display.CaptureImage', menu='Plugins > Utilities > Capture Image', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.display.CaptureScreen', menu='Plugins > Utilities > Capture Screen', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.typechange.TypeChanger', menu='Image > Type > Change...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.display.ChannelsTool', menu='Image > Color > Channels Tool...', iconPath='/icons/commands/color_wheel.png', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.options.OptionsChannels', menu='Edit > Options > Channels...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>> [DEBUG] - class='org.scijava.plugins.commands.io.ClearRecent', label='Clear Recent', menu='File > Open Recent > Clear List', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='org.scijava.plugins.commands.display.Close', menu='File > Close', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.binary.CloseBinaryImage', menu='Process > Binary > Close', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='org.scijava.plugins.commands.display.CloseAll', menu='File > Close All', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.options.OptionsCompatibility', menu='Edit > Options > Compatibility...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>> [DEBUG] - class='net.imagej.options.OptionsCompiler', menu='Edit > Options > Compiler...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionContraharmonicMean', menu='Process > Noise > Noise Reduction > Contraharmonic Mean', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.options.OptionsConversions', menu='Edit > Options > Conversions...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>> [DEBUG] - class='net.imagej.ops.commands.convert.ConvertImgPlus', menu='Image > Convert', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.ops.commands.convolve.Convolve', menu='Image > Convolve', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.app.CopyToSystem', menu='Edit > Copy To System', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.binary.CreateMask', menu='Process > Binary > Create Mask...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.app.CreateShortcut', menu='Plugins > Shortcuts > Create Shortcut...', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.imglib.CropImage', menu='Image > Crop', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.options.OptionsDicom', menu='Edit > Options > DICOM...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>> [DEBUG] - class='net.imagej.options.OptionsOverlay', label='Default Overlay Settings', menu='Image > Overlay > Overlay Options...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>> [DEBUG] - class='net.imagej.plugins.commands.restructure.DeleteAxis', menu='Image > Axes > Delete Axis...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.restructure.DeleteData', menu='Image > Data > Delete Data...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.display.interactive.DeleteThreshold', menu='Image > Adjust > Delete Threshold', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.display.DeselectOverlays', menu='Edit > Selection > Deselect Overlays', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='org.scijava.ui.swing.commands.DialogPromptDemo', menu='Plugins > Sandbox > Dialog Prompt Demo', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.binary.DilateBinaryImage', menu='Process > Binary > Dilate', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.DivideDataValuesBy', menu='Process > Math > Divide...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='org.scijava.plugins.commands.debug.DumpStack', menu='Plugins > Debug > Dump Stack', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.imglib.DuplicateImage', menu='Image > Duplicate', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.imglib.DuplicateImageContext', menu='Duplicate...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsEast', menu='Process > Shadows > East', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.restructure.EditAxes', menu='Image > Axes > Edit Axes...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.EquationDataValues', menu='Process > Math > Equation...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.binary.ErodeBinaryImage', menu='Process > Binary > Erode', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.ExpDataValues', menu='Process > Math > Exp...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.FillDataValues', menu='Edit > Fill', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='org.scijava.ui.swing.commands.CommandFinder', menu='Plugins > Utilities > Find Commands...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.neigh.FindEdges', menu='Process > Find Edges', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.display.Flatten', menu='Image > Overlay > Flatten', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.restructure.FlipAxis', menu='Image > Transform > Flip Axis', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.rotate.FlipHorizontally', menu='Image > Transform > Flip Horizontally', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.rotate.FlipVertically', menu='Image > Transform > Flip Vertically', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.tools.FloodFillToolConfig', label='Flood Fill Tool', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.options.OptionsFont', menu='Edit > Options > Fonts...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>> [DEBUG] - class='net.imagej.plugins.commands.overlay.FromOverlayManager', menu='Image > Overlay > From Overlay Manager', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.GammaDataValues', menu='Process > Math > Gamma...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.imglib.GaussianBlur', menu='Process > Filters > Gaussian Blur...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionGeometricMean', menu='Process > Noise > Noise Reduction > Geometric Mean', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionHarmonicMean', menu='Process > Noise > Noise Reduction > Harmonic Mean', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.display.HistogramPlot', menu='Analyze > Histogram Plot', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.calculator.ImageCalculator', menu='Process > Image Calculator...', iconPath='/icons/commands/calculator.png', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.io.OpenDataset', menu='File > Import > Image... ', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.io.SaveDataset', menu='File > Export > Image...  ', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.app.ImageJWebsite', menu='Help > ImageJ Website...', iconPath='/icons/commands/world_link.png', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.legacy.ImageJ2Options', label='ImageJ2 Options', menu='Edit > Options > ImageJ2...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>> [DEBUG] - class='net.imagej.options.OptionsInputOutput', menu='Edit > Options > Input/Output...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>> [DEBUG] - class='net.imagej.plugins.commands.debug.InspectImg', menu='Plugins > Debug > Inspect Image', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='org.scijava.ui.swing.commands.InspectObjects', menu='Plugins > Debug > Inspect Objects', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='org.scijava.plugins.commands.debug.InvalidCommandDemo$InvalidCommand', menu='Plugins > Debug > Invalid Command', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.InvertDataValues', menu='Edit > Invert...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.lut.LUTSelector', label='LUT Selector', menu='Image > Lookup Tables > Select...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.overlay.OverlayLabels', menu='Image > Overlay > Labels...', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.options.OptionsLineWidth', menu='Edit > Options > Line Width...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>> [DEBUG] - class='net.imagej.plugins.commands.app.ListShortcuts', menu='Plugins > Shortcuts > List Shortcuts...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.LogDataValues', menu='Process > Math > Log...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='org.scijava.ui.swing.options.OptionsLookAndFeel', menu='Edit > Options > Look and Feel...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>> [DEBUG] - class='net.imagej.plugins.commands.binary.MakeBinary', menu='Process > Binary > Make Binary...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.overlay.ConvertToMask', menu='Process > Binary > Make Mask Overlay...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.debug.MandelbrotSetImage', menu='Plugins > Sandbox > Mandelbrot Set', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.MaxDataValues', menu='Process > Math > Max...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMax', menu='Process > Noise > Noise Reduction > Maximum', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMean', menu='Process > Noise > Noise Reduction > Mean', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.debug.MeasurementDemo', menu='Plugins > Sandbox > Measurement Demo', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMedian', menu='Process > Noise > Noise Reduction > Median', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.options.OptionsMemoryAndThreads', menu='Edit > Options > Memory & Threads...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMidpoint', menu='Process > Noise > Noise Reduction > Midpoint', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.MinDataValues', menu='Process > Math > Min...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMin', menu='Process > Noise > Noise Reduction > Minimum', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.options.OptionsMisc', menu='Edit > Options > Misc...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>> [DEBUG] - class='net.imagej.legacy.plugin.MixedWorldCommand', menu='Plugins > Sandbox > Mixed World Command', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.debug.MultidimImage', menu='Plugins > Sandbox > Multidimensional Test Image', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.MultiplyDataValuesBy', menu='Process > Math > Multiply...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.imglib.NanBackground', menu='Process > Math > NaN Background', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.io.NewImage', label='New Image...', menu='File > New > Image...', iconPath='/icons/commands/picture.png', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNorth', menu='Process > Shadows > North', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNortheast', menu='Process > Shadows > Northeast', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNorthwest', menu='Process > Shadows > Northwest', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.OrDataValuesWith', menu='Process > Math > OR...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.binary.OpenBinaryImage', menu='Process > Binary > Open', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='org.scijava.plugins.commands.io.OpenFile', menu='File > Open...', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomOriginalScale', menu='Image > Zoom > Original Scale', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.display.interactive.OrthogonalViews', menu='Image > Stacks > Orthogonal Views', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.ui.swing.commands.OverlayManager', menu='Image > Overlay > Overlay Manager', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.overlay.OverlayProperties', label='Overlay Properties...', menu='Image > Overlay > Properties...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.tools.PaintBrushToolConfig', label='Paintbrush Tool', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='org.scijava.plugins.commands.debug.ParamAssignOrder', menu='Plugins > Sandbox > Parameter Assignment Order', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.tools.PencilToolConfig', label='Pencil Tool', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='fiji.DefaultFijiService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='fiji.patches.FijiAppConfiguration', priority=0.0, enabled=true, pluginType=LegacyAppConfiguration
>> [DEBUG] - class='fiji.patches.OldLegacyEditor', priority=0.0, enabled=true, pluginType=LegacyEditor
>> [DEBUG] - class='fiji.patches.OldAppConfiguration', priority=0.0, enabled=true, pluginType=LegacyAppConfiguration
>> [DEBUG] - class='net.imglib2.meta.units.DefaultUnitService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTObjectWidget', priority=0.0, enabled=true, pluginType=InputWidget
>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTToggleWidget', priority=0.0, enabled=true, pluginType=InputWidget
>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTChoiceWidget', priority=0.0, enabled=true, pluginType=InputWidget
>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTNumberWidget', priority=0.0, enabled=true, pluginType=InputWidget
>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTTextWidget', priority=0.0, enabled=true, pluginType=InputWidget
>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTFileWidget', priority=0.0, enabled=true, pluginType=InputWidget
>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTButtonWidget', priority=0.0, enabled=true, pluginType=InputWidget
>> [DEBUG] - class='net.imagej.plugins.uploaders.ssh.SSHFileUploader', priority=0.0, enabled=true, pluginType=Uploader
>> [DEBUG] - class='net.imagej.plugins.uploaders.ssh.SFTPFileUploader', priority=0.0, enabled=true, pluginType=Uploader
>> [DEBUG] - class='net.imagej.plugins.uploaders.webdav.WebDAVUploader', priority=0.0, enabled=true, pluginType=Uploader
>> [DEBUG] - class='org.scijava.plugins.text.markdown.MarkdownTextFormat', priority=0.0, enabled=true, pluginType=TextFormat
>> [DEBUG] - class='net.imagej.ui.awt.AWTRenderingService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.ui.awt.AWTScreenCaptureService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.object.DefaultObjectService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.convert.DefaultConverter', priority=0.0, enabled=true, pluginType=Converter
>> [DEBUG] - class='org.scijava.convert.DefaultConvertService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.input.DefaultInputService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.ui.DefaultUIService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.ui.dnd.DefaultDragAndDropService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.ui.dnd.ListDragAndDropHandler', priority=0.0, enabled=true, pluginType=DragAndDropHandler
>> [DEBUG] - class='org.scijava.ui.dnd.ScriptFileDragAndDropHandler', priority=0.0, enabled=true, pluginType=DragAndDropHandler
>> [DEBUG] - class='org.scijava.ui.console.UIArgument', priority=0.0, enabled=true, pluginType=ConsoleArgument
>> [DEBUG] - class='org.scijava.plugin.DefaultPluginService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.text.DefaultTextService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.display.DefaultDisplayService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.prefs.DefaultPrefService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.io.DefaultRecentFileService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.io.console.OpenArgument', priority=0.0, enabled=true, pluginType=ConsoleArgument
>> [DEBUG] - class='org.scijava.io.DefaultIOService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.widget.DefaultWidgetService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.menu.DefaultMenuService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.tool.DefaultToolService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.app.DefaultAppService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.app.DefaultStatusService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.module.DefaultModuleService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.welcome.DefaultWelcomeService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.thread.DefaultThreadService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.script.io.ScriptIOPlugin', priority=0.0, enabled=true, pluginType=IOPlugin
>> [DEBUG] - class='org.scijava.script.DefaultScriptHeaderService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.event.DefaultEventHistory', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.platform.DefaultPlatformService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.options.DefaultOptionsService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.command.DefaultCommandService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.command.console.RunArgument', priority=0.0, enabled=true, pluginType=ConsoleArgument
>> [DEBUG] - class='org.scijava.console.DefaultConsoleService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.SciJava', priority=0.0, enabled=true, pluginType=Gateway
>> [DEBUG] - class='net.imagej.operator.DefaultCalculatorService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.autoscale.DefaultAutoscaleService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.sampler.DefaultSamplerService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.lut.io.LUTIOPlugin', priority=0.0, enabled=true, pluginType=IOPlugin
>> [DEBUG] - class='net.imagej.display.DefaultDatasetView', priority=0.0, enabled=true, pluginType=DataView
>> [DEBUG] - class='net.imagej.display.DefaultImageDisplay', priority=0.0, enabled=true, pluginType=Display
>> [DEBUG] - class='net.imagej.display.DefaultZoomService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.display.DefaultOverlayService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.display.DefaultImageDisplayService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.display.DefaultOverlayView', priority=0.0, enabled=true, pluginType=DataView
>> [DEBUG] - class='net.imagej.display.DefaultWindowService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.types.DataType32BitSignedFloat', priority=0.0, enabled=true, pluginType=DataType
>> [DEBUG] - class='net.imagej.types.DataType12BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType
>> [DEBUG] - class='net.imagej.types.DataType64BitSignedFloat', priority=0.0, enabled=true, pluginType=DataType
>> [DEBUG] - class='net.imagej.types.DataType8BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType
>> [DEBUG] - class='net.imagej.types.DataType32BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType
>> [DEBUG] - class='net.imagej.types.DataType32BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType
>> [DEBUG] - class='net.imagej.types.DataType64BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType
>> [DEBUG] - class='net.imagej.types.DataType16BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType
>> [DEBUG] - class='net.imagej.types.DataType16BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType
>> [DEBUG] - class='net.imagej.types.DataType1BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType
>> [DEBUG] - class='net.imagej.types.DataType8BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType
>> [DEBUG] - class='net.imagej.types.DefaultDataTypeService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.DefaultImgPlusService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.minmax.DefaultMinMaxMethod', priority=0.0, enabled=true, pluginType=MinMaxMethod
>> [DEBUG] - class='net.imagej.ui.DefaultImageJUIService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.ui.dnd.LUTFileDragAndDropHandler', priority=0.0, enabled=true, pluginType=DragAndDropHandler
>> [DEBUG] - class='net.imagej.measure.DefaultStatisticsService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.measure.DefaultMeasurementService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.threshold.DefaultThresholdService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.animation.DefaultAnimationService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.table.DefaultTableDisplay', priority=0.0, enabled=true, pluginType=Display
>> [DEBUG] - class='net.imagej.DefaultDatasetService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='io.scif.io.URLHandle', priority=0.0, enabled=true, pluginType=IStreamAccess
>> [DEBUG] - class='io.scif.codec.LZWCodec', priority=0.0, enabled=true, pluginType=Codec
>> [DEBUG] - class='io.scif.io.DefaultNIOService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='io.scif.img.converters.DefaultPlaneConverterService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='io.scif.img.cell.SCIFIOCellCacheCleaningProvider', priority=0.0, enabled=true, pluginType=RefProvider
>> [DEBUG] - class='io.scif.codec.JPEG2000Codec', priority=0.0, enabled=true, pluginType=Codec
>> [DEBUG] - class='io.scif.img.DefaultImgUtilityService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='io.scif.gui.DefaultGUIService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='io.scif.filters.DimensionSwapper', priority=0.0, enabled=true, pluginType=Filter
>> [DEBUG] - class='io.scif.xml.DefaultXMLService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='io.scif.codec.HuffmanCodec', priority=0.0, enabled=true, pluginType=Codec
>> [DEBUG] - class='io.scif.refs.DefaultRefManagerService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='io.scif.services.DefaultFormatService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='io.scif.codec.RPZACodec', priority=0.0, enabled=true, pluginType=Codec
>> [DEBUG] - class='io.scif.codec.MJPBCodec', priority=0.0, enabled=true, pluginType=Codec
>> [DEBUG] - class='io.scif.codec.PassthroughCodec', priority=0.0, enabled=true, pluginType=Codec
>> [DEBUG] - class='io.scif.filters.PlaneSeparatorMetadata', priority=0.0, enabled=true, pluginType=MetadataWrapper
>> [DEBUG] - class='io.scif.filters.ChannelFiller', priority=0.0, enabled=true, pluginType=Filter
>> [DEBUG] - class='io.scif.codec.PackbitsCodec', priority=0.0, enabled=true, pluginType=Codec
>> [DEBUG] - class='io.scif.filters.MinMaxFilter', priority=0.0, enabled=true, pluginType=Filter
>> [DEBUG] - class='io.scif.io.BZip2Handle', priority=0.0, enabled=true, pluginType=IStreamAccess
>> [DEBUG] - class='io.scif.services.DefaultTranslatorService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='io.scif.img.cell.RefMapCleaningProvider', priority=0.0, enabled=true, pluginType=RefProvider
>> [DEBUG] - class='io.scif.codec.QTRLECodec', priority=0.0, enabled=true, pluginType=Codec
>> [DEBUG] - class='io.scif.io.GZipHandle', priority=0.0, enabled=true, pluginType=IStreamAccess
>> [DEBUG] - class='io.scif.codec.LosslessJPEGCodec', priority=0.0, enabled=true, pluginType=Codec
>> [DEBUG] - class='io.scif.codec.MSVideoCodec', priority=0.0, enabled=true, pluginType=Codec
>> [DEBUG] - class='io.scif.filters.PlaneSeparator', priority=0.0, enabled=true, pluginType=Filter
>> [DEBUG] - class='io.scif.codec.Base64Codec', priority=0.0, enabled=true, pluginType=Codec
>> [DEBUG] - class='io.scif.SCIFIO', priority=0.0, enabled=true, pluginType=Gateway
>> [DEBUG] - class='io.scif.codec.DefaultCodecService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='io.scif.codec.JPEGCodec', priority=0.0, enabled=true, pluginType=Codec
>> [DEBUG] - class='io.scif.img.ImgPlusCtxCleaningProvider', priority=0.0, enabled=true, pluginType=RefProvider
>> [DEBUG] - class='io.scif.codec.LuraWaveCodec', priority=0.0, enabled=true, pluginType=Codec
>> [DEBUG] - class='io.scif.img.cell.SCIFIOCellCleaningProvider', priority=0.0, enabled=true, pluginType=RefProvider
>> [DEBUG] - class='io.scif.codec.MSRLECodec', priority=0.0, enabled=true, pluginType=Codec
>> [DEBUG] - class='io.scif.img.cell.cache.MapDBCache', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='io.scif.DefaultMetadataService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='io.scif.img.cell.SCIFIOCellImgCleaningProvider', priority=0.0, enabled=true, pluginType=RefProvider
>> [DEBUG] - class='io.scif.filters.FileStitcher', priority=0.0, enabled=true, pluginType=Filter
>> [DEBUG] - class='io.scif.services.DefaultFilePatternService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='io.scif.io.ZipHandle', priority=0.0, enabled=true, pluginType=IStreamAccess
>> [DEBUG] - class='io.scif.codec.NikonCodec', priority=0.0, enabled=true, pluginType=Codec
>> [DEBUG] - class='io.scif.formats.tiff.DefaultTiffService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='io.scif.services.DefaultLocationService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='io.scif.codec.ZlibCodec', priority=0.0, enabled=true, pluginType=Codec
>> [DEBUG] - class='io.scif.services.JAIIIOServiceImpl', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='io.scif.formats.qt.DefaultQTJavaService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Batch', priority=0.0, enabled=true, pluginType=ConsoleArgument
>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$IJPath', priority=0.0, enabled=true, pluginType=ConsoleArgument
>> [DEBUG] - class='net.imagej.legacy.plugin.LegacyAutoImporter', priority=0.0, enabled=true, pluginType=AutoImporter
>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Macro', priority=0.0, enabled=true, pluginType=ConsoleArgument
>> [DEBUG] - class='net.imagej.legacy.LegacyJavaRunner', priority=0.0, enabled=true, pluginType=JavaRunner
>> [DEBUG] - class='net.imagej.legacy.display.DefaultImagePlusDisplayViewer', priority=0.0, enabled=true, pluginType=DisplayViewer
>> [DEBUG] - class='net.imagej.legacy.display.DefaultImagePlusDisplay', priority=0.0, enabled=true, pluginType=Display
>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Run', priority=0.0, enabled=true, pluginType=ConsoleArgument
>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Filename', priority=0.0, enabled=true, pluginType=ConsoleArgument
>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Debug', priority=0.0, enabled=true, pluginType=ConsoleArgument
>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Eval', priority=0.0, enabled=true, pluginType=ConsoleArgument
>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Port', priority=0.0, enabled=true, pluginType=ConsoleArgument
>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingDateWidget', priority=0.0, enabled=true, pluginType=InputWidget
>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingFileWidget', priority=0.0, enabled=true, pluginType=InputWidget
>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingChoiceWidget', priority=0.0, enabled=true, pluginType=InputWidget
>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingNumberWidget', priority=0.0, enabled=true, pluginType=InputWidget
>> [DEBUG] - class='org.scijava.ui.swing.SwingIconService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.ui.swing.viewer.text.SwingTextDisplayViewer', priority=0.0, enabled=true, pluginType=DisplayViewer
>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingObjectWidget', priority=0.0, enabled=true, pluginType=InputWidget
>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingToggleWidget', priority=0.0, enabled=true, pluginType=InputWidget
>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingTextWidget', priority=0.0, enabled=true, pluginType=InputWidget
>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingColorWidget', priority=0.0, enabled=true, pluginType=InputWidget
>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingButtonWidget', priority=0.0, enabled=true, pluginType=InputWidget
>> [DEBUG] - class='org.scijava.plugins.scripting.java.CommandJavaRunner', priority=0.0, enabled=true, pluginType=JavaRunner
>> [DEBUG] - class='org.scijava.plugins.scripting.java.DefaultJavaService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.ui.swing.sdi.viewer.SwingSdiImageDisplayViewer', priority=0.0, enabled=true, pluginType=DisplayViewer
>> [DEBUG] - class='net.imagej.ui.swing.viewer.table.SwingTableDisplayViewer', priority=0.0, enabled=true, pluginType=DisplayViewer
>> [DEBUG] - class='net.imagej.ui.swing.overlay.JHotDrawService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.ui.swing.mdi.viewer.SwingMdiImageDisplayViewer', priority=0.0, enabled=true, pluginType=DisplayViewer
>> [DEBUG] - class='net.imagej.ui.swing.widget.SwingColorTableWidget', priority=0.0, enabled=true, pluginType=InputWidget
>> [DEBUG] - class='net.imagej.ui.swing.widget.SwingDimSelectionWidget', priority=0.0, enabled=true, pluginType=InputWidget
>> [DEBUG] - class='net.imagej.ui.swing.widget.SwingHistogramWidget', priority=0.0, enabled=true, pluginType=InputWidget
>> [DEBUG] - class='net.imagej.updater.FileUploader', priority=0.0, enabled=true, pluginType=Uploader
>> [DEBUG] - class='net.imagej.updater.DefaultUpdateService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.updater.DefaultUploaderService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.ImageJ', priority=0.0, enabled=true, pluginType=Gateway
>> [DEBUG] - class='net.imagej.ops.DefaultOpService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.ops.threshold.LocalMean', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.DefaultOpMatchingService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.plugins.commands.dataset.LoadDataset', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.overlay.SelectedManagerOverlayProperties', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.misc.ApplyLookupTable', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.plugins.scripting.jruby.JRubyScriptHeader', priority=0.0, enabled=true, pluginType=ScriptHeader
>> [DEBUG] - class='fiji.plugin.trackmate.action.TrackBranchAnalysis$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackLocationAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer
>> [DEBUG] - class='fiji.plugin.trackmate.visualization.hyperstack.HyperStackDisplayerFactory', priority=0.0, enabled=true, pluginType=ViewFactory
>> [DEBUG] - class='fiji.plugin.trackmate.features.edges.EdgeTimeLocationAnalyzer', priority=0.0, enabled=true, pluginType=EdgeAnalyzer
>> [DEBUG] - class='fiji.plugin.trackmate.action.ResetRadiusAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>> [DEBUG] - class='fiji.plugin.trackmate.action.RecalculateFeatureAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>> [DEBUG] - class='fiji.plugin.trackmate.action.ISBIChallengeExporter$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>> [DEBUG] - class='fiji.plugin.trackmate.action.MergeFileAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>> [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotRadiusEstimatorFactory', priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory
>> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackBranchingAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer
>> [DEBUG] - class='fiji.plugin.trackmate.action.PlotNSpotsVsTimeAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>> [DEBUG] - class='fiji.plugin.trackmate.action.ExportStatsToIJAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>> [DEBUG] - class='fiji.plugin.trackmate.features.edges.EdgeTargetAnalyzer', priority=0.0, enabled=true, pluginType=EdgeAnalyzer
>> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackDurationAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer
>> [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotIntensityAnalyzerFactory', priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory
>> [DEBUG] - class='fiji.plugin.trackmate.features.edges.EdgeVelocityAnalyzer', priority=0.0, enabled=true, pluginType=EdgeAnalyzer
>> [DEBUG] - class='fiji.plugin.trackmate.detection.LogDetectorFactory', priority=0.0, enabled=true, pluginType=SpotDetectorFactory
>> [DEBUG] - class='fiji.plugin.trackmate.action.ExportTracksToXML$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>> [DEBUG] - class='fiji.plugin.trackmate.action.LinkNew3DViewerAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>> [DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.SimpleLAPTrackerFactory', priority=0.0, enabled=true, pluginType=SpotTrackerFactory
>> [DEBUG] - class='fiji.plugin.trackmate.action.ResetSpotTimeFeatureAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>> [DEBUG] - class='fiji.plugin.trackmate.action.RadiusToEstimatedAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>> [DEBUG] - class='fiji.plugin.trackmate.action.IcyTrackExporter$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>> [DEBUG] - class='fiji.plugin.trackmate.action.CaptureOverlayAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>> [DEBUG] - class='fiji.plugin.trackmate.tracking.sparselap.SimpleSparseLAPTrackerFactory', priority=0.0, enabled=true, pluginType=SpotTrackerFactory
>> [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotMorphologyAnalyzerFactory', priority=0.0, enabled=false, pluginType=SpotAnalyzerFactory
>> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackSpotQualityFeatureAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer
>> [DEBUG] - class='fiji.plugin.trackmate.action.CopyOverlayAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>> [DEBUG] - class='fiji.plugin.trackmate.tracking.sparselap.SparseLAPTrackerFactory', priority=0.0, enabled=true, pluginType=SpotTrackerFactory
>> [DEBUG] - class='fiji.plugin.trackmate.detection.ManualDetectorFactory', priority=0.0, enabled=true, pluginType=SpotDetectorFactory
>> [DEBUG] - class='fiji.plugin.trackmate.features.manual.ManualSpotColorAnalyzerFactory', priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory
>> [DEBUG] - class='fiji.plugin.trackmate.detection.DogDetectorFactory', priority=0.0, enabled=true, pluginType=SpotDetectorFactory
>> [DEBUG] - class='fiji.plugin.trackmate.action.ExtractTrackStackAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>> [DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.LAPTrackerFactory', priority=0.0, enabled=true, pluginType=SpotTrackerFactory
>> [DEBUG] - class='fiji.plugin.trackmate.features.manual.ManualEdgeColorAnalyzer', priority=0.0, enabled=true, pluginType=EdgeAnalyzer
>> [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotContrastAnalyzerFactory', priority=0.0, enabled=false, pluginType=SpotAnalyzerFactory
>> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackSpeedStatisticsAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer
>> [DEBUG] - class='fiji.plugin.trackmate.detection.DownsampleLogDetectorFactory', priority=0.0, enabled=true, pluginType=SpotDetectorFactory
>> [DEBUG] - class='fiji.plugin.trackmate.visualization.trackscheme.TrackSchemeFactory', priority=0.0, enabled=true, pluginType=ViewFactory
>> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackIndexAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer
>> [DEBUG] - class='io.scif.cli.commands.Help', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand
>> [DEBUG] - class='io.scif.cli.commands.Show', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand
>> [DEBUG] - class='io.scif.cli.commands.Info', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand
>> [DEBUG] - class='io.scif.cli.commands.Convert', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand
>> [DEBUG] - class='io.scif.ome.commands.OMEXMLToolCommand', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand
>> [DEBUG] - class='io.scif.ome.translators.DefaultOMETranslator', priority=0.0, enabled=true, pluginType=ToOMETranslator
>> [DEBUG] - class='io.scif.ome.services.DefaultOMEXMLService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='io.scif.ome.services.DefaultOMEMetadataService', priority=0.0, enabled=true, pluginType=Service
>> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat', priority=0.0, enabled=true, pluginType=Format
>> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat$OMETranslator', priority=0.0, enabled=true, pluginType=Translator
>> [DEBUG] - class='io.scif.tools.commands.Show', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand
>> [DEBUG] - class='io.scif.tools.commands.Help', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand
>> [DEBUG] - class='io.scif.tools.commands.Info', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand
>> [DEBUG] - class='io.scif.tools.commands.Convert', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand
>> [DEBUG] - class='io.scif.lifesci.SDTFormat', priority=0.0, enabled=true, pluginType=Format
>> [DEBUG] - class='net.imagej.options.OptionsPointTool', menu='Edit > Options > Point Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>> [DEBUG] - class='net.imagej.plugins.commands.debug.PointSetDemo', menu='Plugins > Sandbox > PointSet Demo', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.PowerDataValues', menu='Process > Math > Power...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.app.Preferences', label='Preferences', menu='File > Preferences', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.options.OptionsProfilePlot', menu='Edit > Options > Profile Plot Options...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>> [DEBUG] - class='net.imagej.ops.commands.project.ProjectCommand', menu='Image > Threshold > Project', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.options.OptionsProxy', menu='Edit > Options > Proxy Settings...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>> [DEBUG] - class='net.imagej.app.QuitProgram', label='Quit', menu='File > Quit', iconPath='/icons/commands/door_in.png', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.RadialNeighborhoodSpecifier', label='Radial Neighborhood Specification', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.ReciprocalDataValues', menu='Process > Math > Reciprocal...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.RectangularNeighborhoodSpecifier', label='Rectangular Neighborhood Specification', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.display.RemoveOverlay', menu='Image > Overlay > Remove Overlay', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.display.RemoveOverlayReferences', menu='Image > Overlay > Remove Overlay References', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.restructure.ReorderAxis', menu='Image > Axes > Reorder Axis', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.restructure.ReorderData', menu='Image > Data > Reorder Data...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.options.OptionsReset', menu='Edit > Options > Reset', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.imglib.ResizeImage', menu='Image > Adjust > Resize...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.imglib.ResliceImage', menu='Image > Stacks > Reslice...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.io.RevertImage', menu='File > Revert', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.rotate.Rotate90DegreesLeft', menu='Image > Transform > Rotate 90 Degrees Left', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.rotate.Rotate90DegreesRight', menu='Image > Transform > Rotate 90 Degrees Right', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.imglib.RotateImageXY', menu='Image > Transform > Rotate...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.options.OptionsRoundedRectangleTool', menu='Edit > Options > Rounded Rect Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>> [DEBUG] - class='org.scijava.plugins.commands.script.RunScript', menu='Plugins > Run Script...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.imglib.SaltAndPepper', menu='Process > Noise > Salt and Pepper', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.io.SaveImage', menu='File > Save', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.io.SaveAsImage', menu='File > Save As...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.ui.swing.script.ScriptEditor', menu='File > New > Script...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.display.SelectOverlays', menu='Edit > Selection > Select Overlays', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.display.SelectView', menu='Edit > Selection > Select View', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.display.SelectWindow', label='Select Window...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.legacy.plugin.GetPath', label='Select path', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.axispos.SetActiveAxis', menu='Image > Axes > Set Active Axis...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.axispos.SetAxisPosition', menu='Image > Axes > Set Axis Position...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomSet', label='Set Zoom...', menu='Image > Zoom > Set...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.SetDataValues', menu='Process > Math > Set...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsDemo', menu='Process > Shadows > Shadows Demo', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.correlate.SharpenDataValues', menu='Process > Sharpen', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.misc.ShowInfo', menu='Image > Show Info...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.display.ShowLUT', menu='Image > Color > Show LUT', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.display.ShowLUTAsTable', menu='Image > Color > Show LUT As Table', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.correlate.SmoothDataValues', menu='Process > Smooth', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsSouth', menu='Process > Shadows > South', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsSoutheast', menu='Process > Shadows > Southeast', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsSouthwest', menu='Process > Shadows > Southwest', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.overlay.SelectionSpecify', menu='Edit > Selection > Specify...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.display.SpectralComposite', menu='Image > Color > Spectral Composite...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.restructure.SplitChannelsContext', menu='Split Channels', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.tools.SprayCanToolConfig', label='Spray Can Tool', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.SquareRootDataValues', menu='Process > Math > Square Root...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.SquareDataValues', menu='Process > Math > Square...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.animation.StartAnimation', menu='Image > Animation > Start Animation', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.debug.StatisticsDemo', menu='Plugins > Sandbox > Statistics Demo', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.animation.StopAllAnimations', menu='Image > Animation > Stop All Animations', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.animation.StopAnimation', menu='Image > Animation > Stop Animation', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='org.scijava.plugins.commands.debug.ShowSubscribers', menu='Plugins > Debug > Subscribers', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.SubtractFromDataValues', menu='Process > Math > Subtract...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.legacy.plugin.SwitchToLegacyMode', menu='Help > Switch to Legacy Mode', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.display.interactive.SynchronizeWindows', menu='Analyze > Tools > Synchronize Windows', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='org.scijava.plugins.commands.debug.SystemInformation', menu='Plugins > Debug > System Information', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.debug.TableDemo', menu='Plugins > Sandbox > Table Demo', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='org.scijava.plugins.commands.debug.TextDisplayTest', menu='Plugins > Sandbox > TextDisplayTest', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.updater.PromptUserToUpdate', label='There are updates available', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.display.interactive.Threshold', menu='Image > Adjust > Threshold...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='org.scijava.ui.swing.mdi.WindowsTileVertical', menu='Window > Tile Vertical', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomToSelection', menu='Image > Zoom > To Selection', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.imglib.TranslateImage', menu='Image > Transform > Translate...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionTrimmedMean', menu='Process > Noise > Noise Reduction > Trimmed Mean', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.updater.CheckForUpdates', label='Up-to-date check', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.ui.swing.updater.ImageJUpdater', menu='Help > Update...', priority=0.0, enabled=true, pluginType=UpdaterUI
>> [DEBUG] - class='net.imagej.plugins.commands.upload.SampleImageUploader', menu='Help > Upload Sample Image', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.zoom.Zoom100Percent', menu='Image > Zoom > View 100%', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.options.OptionsWandTool', menu='Edit > Options > Wand Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>> [DEBUG] - class='org.scijava.ui.swing.commands.WatchEvents', menu='Plugins > Debug > Watch Events', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsWest', menu='Process > Shadows > West', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.assign.XorDataValuesWith', menu='Process > Math > XOR...', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomIn', label='Zoom In', menu='Image > Zoom > In', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomOut', label='Zoom Out', menu='Image > Zoom > Out', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='net.imagej.ui.swing.script.TextEditor$BeanshellHighlighter', label='beanshell', priority=0.0, enabled=true, pluginType=SyntaxHighlighter
>> [DEBUG] - class='net.imagej.ui.swing.script.TextEditor$ECMAScriptHighlighter', label='ecmascript', priority=0.0, enabled=true, pluginType=SyntaxHighlighter
>> [DEBUG] - class='net.imagej.ui.swing.script.TextEditor$IJ1MacroHighlighter', label='ij1-macro', priority=0.0, enabled=true, pluginType=SyntaxHighlighter
>> [DEBUG] - class='net.imagej.ui.swing.script.TextEditor$MatlabHighlighter', label='matlab', priority=0.0, enabled=true, pluginType=SyntaxHighlighter
>> [DEBUG] - class='net.imagej.plugins.commands.app.EasterEgg', label='| It's a secret to everyone |', priority=0.0, enabled=true, pluginType=Command
>> [DEBUG] - class='io.scif.formats.APNGFormat', name='Animated PNG', priority=0.0, enabled=true, pluginType=Format
>> [DEBUG] - class='io.scif.img.converters.ArrayDataAccessConverter', name='ArrayDataAccess', priority=0.0, enabled=true, pluginType=PlaneConverter
>> [DEBUG] - class='io.scif.formats.AVIFormat', name='Audio Video Interleave', priority=0.0, enabled=true, pluginType=Format
>> [DEBUG] - class='net.imagej.plugins.tools.AxisPositionHandler', name='Axis Position Shortcuts', priority=0.0, enabled=true, pluginType=Tool
>> [DEBUG] - class='org.scijava.plugins.scripting.beanshell.BeanshellScriptLanguage', name='BeanShell', priority=0.0, enabled=true, pluginType=ScriptLanguage
>> [DEBUG] - class='org.scijava.plugins.scripting.clojure.ClojureScriptLanguage', name='Clojure', priority=0.0, enabled=true, pluginType=ScriptLanguage
>> [DEBUG] - class='net.imagej.autoscale.ConfidenceIntervalAutoscaleMethod', name='Confidence Interval', priority=0.0, enabled=true, pluginType=AutoscaleMethod
>> [DEBUG] - class='net.imagej.plugins.tools.ContextMenuHandler', name='Context Menus', priority=0.0, enabled=true, pluginType=Tool
>> [DEBUG] - class='io.scif.formats.DICOMFormat', name='DICOM', priority=0.0, enabled=true, pluginType=Format
>> [DEBUG] - class='net.imagej.autoscale.DefaultAutoscaleMethod', name='Default', priority=0.0, enabled=true, pluginType=AutoscaleMethod
>> [DEBUG] - class='net.imagej.threshold.DefaultThresholdMethod', name='Default', priority=0.0, enabled=true, pluginType=ThresholdMethod
>> [DEBUG] - class='io.scif.img.converters.RandomAccessConverter', name='Default', priority=0.0, enabled=true, pluginType=PlaneConverter
>> [DEBUG] - class='io.scif.formats.EPSFormat', name='Encapsulated PostScript', priority=0.0, enabled=true, pluginType=Format
>> [DEBUG] - class='io.scif.formats.FITSFormat', name='Flexible Image Transport System', priority=0.0, enabled=true, pluginType=Format
>> [DEBUG] - class='io.scif.formats.GIFFormat', name='Graphics Interchange Format', priority=0.0, enabled=true, pluginType=Format
>> [DEBUG] - class='org.scijava.plugins.scripting.groovy.GroovyScriptLanguage', name='Groovy', priority=0.0, enabled=true, pluginType=ScriptLanguage
>> [DEBUG] - class='net.imagej.threshold.HuangThresholdMethod', name='Huang', priority=0.0, enabled=true, pluginType=ThresholdMethod
>> [DEBUG] - class='net.imagej.legacy.plugin.IJ1MacroLanguage', name='IJ1 Macro', priority=0.0, enabled=true, pluginType=ScriptLanguage
>> [DEBUG] - class='io.scif.formats.ICSFormat', name='Image Cytometry Standard', priority=0.0, enabled=true, pluginType=Format
>> [DEBUG] - class='net.imagej.legacy.LegacyImageJApp', name='ImageJ1', priority=0.0, enabled=true, pluginType=App
>> [DEBUG] - class='net.imagej.threshold.IntermodesThresholdMethod', name='Intermodes', priority=0.0, enabled=true, pluginType=ThresholdMethod
>> [DEBUG] - class='net.imagej.threshold.IsoDataThresholdMethod', name='IsoData', priority=0.0, enabled=true, pluginType=ThresholdMethod
>> [DEBUG] - class='io.scif.formats.JPEGFormat', name='JPEG', priority=0.0, enabled=true, pluginType=Format
>> [DEBUG] - class='io.scif.formats.JPEG2000Format', name='JPEG-2000', priority=0.0, enabled=true, pluginType=Format
>> [DEBUG] - class='org.scijava.plugins.scripting.java.JavaScriptLanguage', name='Java', priority=0.0, enabled=true, pluginType=ScriptLanguage
>> [DEBUG] - class='io.scif.formats.JavaFormat', name='Java source code', priority=0.0, enabled=true, pluginType=Format
>> [DEBUG] - class='org.scijava.plugins.scripting.javascript.JavaScriptScriptLanguage', name='JavaScript', priority=0.0, enabled=true, pluginType=ScriptLanguage
>> [DEBUG] - class='net.imagej.threshold.LiThresholdMethod', name='Li', priority=0.0, enabled=true, pluginType=ThresholdMethod
>> [DEBUG] - class='org.scijava.plugins.platforms.macosx.MacOSXPlatform', name='Mac OS X', priority=0.0, enabled=true, pluginType=Platform
>> [DEBUG] - class='net.imagej.threshold.MaxEntropyThresholdMethod', name='MaxEntropy', priority=0.0, enabled=true, pluginType=ThresholdMethod
>> [DEBUG] - class='net.imagej.threshold.MaxLikelihoodThresholdMethod', name='MaxLikelihood', priority=0.0, enabled=true, pluginType=ThresholdMethod
>> [DEBUG] - class='net.imagej.threshold.MeanThresholdMethod', name='Mean', priority=0.0, enabled=true, pluginType=ThresholdMethod
>> [DEBUG] - class='io.scif.formats.MicromanagerFormat', name='Micro-Manager', priority=0.0, enabled=true, pluginType=Format
>> [DEBUG] - class='net.imagej.threshold.MinErrorThresholdMethod', name='MinError(I)', priority=0.0, enabled=true, pluginType=ThresholdMethod
>> [DEBUG] - class='net.imagej.threshold.MinimumThresholdMethod', name='Minimum', priority=0.0, enabled=true, pluginType=ThresholdMethod
>> [DEBUG] - class='net.imagej.threshold.MomentsThresholdMethod', name='Moments', priority=0.0, enabled=true, pluginType=ThresholdMethod
>> [DEBUG] - class='io.scif.formats.MNGFormat', name='Multiple Network Graphics', priority=0.0, enabled=true, pluginType=Format
>> [DEBUG] - class='io.scif.formats.NRRDFormat', name='NRRD', priority=0.0, enabled=true, pluginType=Format
>> [DEBUG] - class='io.scif.formats.OBFFormat', name='OBF', priority=0.0, enabled=true, pluginType=Format
>> [DEBUG] - class='net.imagej.threshold.OtsuThresholdMethod', name='Otsu', priority=0.0, enabled=true, pluginType=ThresholdMethod
>> [DEBUG] - class='io.scif.formats.PCXFormat', name='PCX', priority=0.0, enabled=true, pluginType=Format
>> [DEBUG] - class='io.scif.formats.qt.PICTFormat', name='PICT', priority=0.0, enabled=true, pluginType=Format
>> [DEBUG] - class='net.imagej.plugins.tools.PanActivator', name='Pan Activator', priority=0.0, enabled=true, pluginType=Tool
>> [DEBUG] - class='net.imagej.threshold.PercentileThresholdMethod', name='Percentile', priority=0.0, enabled=true, pluginType=ThresholdMethod
>> [DEBUG] - class='io.scif.img.converters.PlanarAccessConverter', name='PlanarAccess', priority=0.0, enabled=true, pluginType=PlaneConverter
>> [DEBUG] - class='io.scif.formats.PGMFormat', name='Portable Gray Map', priority=0.0, enabled=true, pluginType=Format
>> [DEBUG] - class='net.imagej.plugins.tools.PixelProbe', name='Probe', priority=0.0, enabled=true, pluginType=Tool
>> [DEBUG] - class='org.scijava.plugins.scripting.jython.JythonScriptLanguage', name='Python', priority=0.0, enabled=true, pluginType=ScriptLanguage
>> [DEBUG] - class='io.scif.formats.qt.NativeQTFormat', name='QuickTime', priority=0.0, enabled=true, pluginType=Format
>> [DEBUG] - class='net.imagej.threshold.RenyiEntropyThresholdMethod', name='RenyiEntropy', priority=0.0, enabled=true, pluginType=ThresholdMethod
>> [DEBUG] - class='org.scijava.plugins.scripting.jruby.JRubyScriptLanguage', name='Ruby', priority=0.0, enabled=true, pluginType=ScriptLanguage
>> [DEBUG] - class='io.scif.app.SCIFIOApp', name='SCIFIO', priority=0.0, enabled=true, pluginType=App
>> [DEBUG] - class='net.imagej.threshold.ShanbhagThresholdMethod', name='Shanbhag', priority=0.0, enabled=true, pluginType=ThresholdMethod
>> [DEBUG] - class='io.scif.formats.FakeFormat', name='Simulated data', priority=0.0, enabled=true, pluginType=Format
>> [DEBUG] - class='io.scif.formats.TextFormat', name='Text', priority=0.0, enabled=true, pluginType=Format
>> [DEBUG] - class='net.imagej.threshold.TriangleThresholdMethod', name='Triangle', priority=0.0, enabled=true, pluginType=ThresholdMethod
>> [DEBUG] - class='net.imagej.plugins.tools.FocusHandler', name='Window Focus', priority=0.0, enabled=true, pluginType=Tool
>> [DEBUG] - class='org.scijava.plugins.platforms.windows.WindowsPlatform', name='Windows', priority=0.0, enabled=true, pluginType=Platform
>> [DEBUG] - class='io.scif.formats.BMPFormat', name='Windows Bitmap', priority=0.0, enabled=true, pluginType=Format
>> [DEBUG] - class='net.imagej.threshold.YenThresholdMethod', name='Yen', priority=0.0, enabled=true, pluginType=ThresholdMethod
>> [DEBUG] - class='io.scif.formats.ZipFormat', name='Zip', priority=0.0, enabled=true, pluginType=Format
>> [DEBUG] - class='net.imagej.plugins.tools.ZoomHandler', name='Zoom Shortcuts', priority=0.0, enabled=true, pluginType=Tool
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealAbs', name='abs', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToImageInPlace', name='add', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddRandomAccessibleIntervalToIterableInterval', name='add', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToPlanarDoubleImage', name='add', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealAddConstant', name='addconstant', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealAddNoise', name='addnoise', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealAndConstant', name='andconstant', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccos', name='arccos', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccosh', name='arccosh', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccot', name='arccot', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccoth', name='arccoth', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccsc', name='arccsc', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccsch', name='arccsch', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArcsec', name='arcsec', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArcsech', name='arcsech', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArcsin', name='arcsin', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArcsinh', name='arcsinh', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArctan', name='arctan', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArctanh', name='arctanh', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.ascii.DefaultASCII', name='ascii', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCeil', name='ceil', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.chunker.DefaultChunker', name='chunker', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealConstant', name='constant', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.convert.ConvertPixClip', name='convert', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.convert.ConvertII', name='convert', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.convert.ConvertPixNormalizeScale', name='convert', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.convert.ConvertPixScale', name='convert', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.convert.ConvertPixCopy', name='convert', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.convolve.ConvolveNaive', name='convolve', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.convolve.ConvolveFourier', name='convolve', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCopy', name='copy', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCos', name='cos', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCosh', name='cosh', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCot', name='cot', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCoth', name='coth', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.create.CreateArrayImg', name='create', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCsc', name='csc', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCsch', name='csch', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCubeRoot', name='cuberoot', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealDivideConstant', name='divideconstant', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.equation.DefaultEquation', name='equation', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealExp', name='exp', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealExpMinusOne', name='expminusone', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealFloor', name='floor', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealGammaConstant', name='gammaconstant', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.gauss.GaussRAI2RAI', name='gauss', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealGaussianRandom', name='gaussianrandom', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.identity.DefaultIdentity', name='identity', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealInvert', name='invert', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinInplaceAndInplace', name='join', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinInplaceAndFunction', name='join', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinFunctionAndFunction', name='join', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinInplaceFunctions', name='join', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinFunctionAndInplace', name='join', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinFunctions', name='join', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealLog', name='log', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealLog10', name='log10', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealLog2', name='log2', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealLogOnePlusX', name='logoneplusx', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.lookup.DefaultLookup', name='lookup', aliases='op', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.loop.DefaultLoopInplace', name='loop', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.loop.DefaultLoopFunction', name='loop', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.threshold.Manual', name='manualthreshold', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.map.MapRA2View', name='map', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.map.MapRAI2View', name='map', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.map.MapII2View', name='map', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealMaxConstant', name='maxconstant', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealMinConstant', name='minconstant', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.misc.MinMaxRealType', name='minmax', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.statistics.moments.Moment2AboutMean', name='moment1aboutmean', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.statistics.moments.Moment1AboutMean', name='moment1aboutmean', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealMultiplyConstant', name='multiplyconstant', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealNearestInt', name='nearestint', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealNegate', name='negate', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.normalize.NormalizeRealType', name='normalize', aliases='norm', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.normalize.NormalizeII', name='normalize', aliases='norm', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealOrConstant', name='orconstant', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.threshold.Otsu', name='otsu', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealPowerConstant', name='powerconstant', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealReciprocal', name='reciprocal', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealRound', name='round', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.scale.ScaleImg', name='scale', aliases='norm', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSec', name='sec', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSech', name='sech', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSignum', name='signum', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSin', name='sin', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSinc', name='sinc', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSincPi', name='sincpi', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSinh', name='sinh', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSqr', name='sqr', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSqrt', name='sqrt', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealStep', name='step', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSubtractConstant', name='subtractconstant', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='org.scijava.ui.swing.sdi.SwingSDIUI', name='swing', priority=0.0, enabled=true, pluginType=UserInterface
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealTan', name='tan', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealTanh', name='tanh', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.threshold.PixThreshold', name='threshold', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.threshold.GlobalThreshold', name='threshold', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.threshold.LocalThreshold', name='threshold', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealUlp', name='ulp', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealUniformRandom', name='uniformrandom', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealXorConstant', name='xorconstant', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealZero', name='zero', priority=0.0, enabled=true, pluginType=Op
>> [DEBUG] - class='fiji.plugin.trackmate.tracking.ManualTrackerFactory', priority=-1.0, enabled=true, pluginType=SpotTrackerFactory
>> [DEBUG] - class='net.imagej.ops.map.ParallelMap', name='map', priority=-95.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.map.ParallelMapI2I', name='map', priority=-97.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.map.ParallelMapI2R', name='map', priority=-98.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.crop.CropImgPlus', name='crop', aliases='slice', priority=-99.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.crop.CropLabeling', name='crop', aliases='slice', priority=-99.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.map.MapII2II', name='map', priority=-99.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.project.parallel.DefaultProjectP', name='project', priority=-99.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.statistics.StdDevRealTypeDirect', name='stddev', priority=-99.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.statistics.VarianceRealTypeDirect', name='variance', priority=-99.0, enabled=true, pluginType=Op
>> [DEBUG] - class='org.scijava.ui.dnd.FileDragAndDropHandler', priority=-100.0, enabled=true, pluginType=DragAndDropHandler
>> [DEBUG] - class='org.scijava.display.DefaultTextDisplay', priority=-100.0, enabled=true, pluginType=Display
>> [DEBUG] - class='org.scijava.log.StderrLogService', priority=-100.0, enabled=true, pluginType=Service
>> [DEBUG] - class='org.scijava.platform.DefaultAppEventService', priority=-100.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.display.DummyScreenCaptureService', priority=-100.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.render.DummyRenderingService', priority=-100.0, enabled=true, pluginType=Service
>> [DEBUG] - class='net.imagej.io.DatasetIOPlugin', priority=-100.0, enabled=true, pluginType=IOPlugin
>> [DEBUG] - class='io.scif.formats.APNGFormat$APNGTranslator', priority=-100.0, enabled=true, pluginType=Translator
>> [DEBUG] - class='io.scif.formats.qt.NativeQTFormat$NativeQTTranslator', priority=-100.0, enabled=true, pluginType=Translator
>> [DEBUG] - class='io.scif.formats.FakeFormat$FakeTranslator', priority=-100.0, enabled=true, pluginType=Translator
>> [DEBUG] - class='io.scif.formats.MicromanagerFormat$MicromanagerTranslator', priority=-100.0, enabled=true, pluginType=Translator
>> [DEBUG] - class='io.scif.services.DefaultInitializeService', priority=-100.0, enabled=true, pluginType=Service
>> [DEBUG] - class='io.scif.formats.AVIFormat$Translator', priority=-100.0, enabled=true, pluginType=Translator
>> [DEBUG] - class='io.scif.formats.ICSFormat$ICSTranslator', priority=-100.0, enabled=true, pluginType=Translator
>> [DEBUG] - class='io.scif.formats.EPSFormat$EPSTranslator', priority=-100.0, enabled=true, pluginType=Translator
>> [DEBUG] - class='io.scif.formats.ImageIOFormat$ImageIOTranslator', priority=-100.0, enabled=true, pluginType=Translator
>> [DEBUG] - class='io.scif.formats.qt.LegacyQTFormat$LegacyQTTranslator', priority=-100.0, enabled=true, pluginType=Translator
>> [DEBUG] - class='net.imagej.legacy.plugin.DefaultLegacyOpener', priority=-100.0, enabled=true, pluginType=LegacyOpener
>> [DEBUG] - class='net.imagej.legacy.plugin.DefaultLegacyEditor', priority=-100.0, enabled=true, pluginType=LegacyEditor
>> [DEBUG] - class='org.scijava.plugins.scripting.java.MainJavaRunner', priority=-100.0, enabled=true, pluginType=JavaRunner
>> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat$OMEXMLTranslator', priority=-100.0, enabled=true, pluginType=Translator
>> [DEBUG] - class='io.scif.formats.qt.LegacyQTFormat', name='QuickTime', priority=-100.0, enabled=true, pluginType=Format
>> [DEBUG] - class='org.scijava.app.SciJavaApp', name='SciJava', priority=-100.0, enabled=true, pluginType=App
>> [DEBUG] - class='io.scif.formats.JPEGTileFormat', name='Tile JPEG', priority=-100.0, enabled=true, pluginType=Format
>> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToNumericType', name='add', priority=-100.0, enabled=true, pluginType=Op
>> [DEBUG] - class='org.scijava.ui.awt.AWTUI', name='awt', priority=-100.0, enabled=true, pluginType=UserInterface
>> [DEBUG] - class='net.imagej.ops.crop.CropRAI', name='crop', aliases='slice', priority=-100.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.map.MapII2RAI', name='map', priority=-100.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.map.MapRAI2III', name='map', priority=-100.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.map.MapI', name='map', priority=-100.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.neighborhood.MapNeighborhood', name='map', priority=-100.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.statistics.MaxRealType', name='max', priority=-100.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.statistics.MeanRealType', name='mean', priority=-100.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.statistics.MedianRealType', name='median', priority=-100.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.statistics.MinRealType', name='min', priority=-100.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.project.ProjectRAI2II', name='project', priority=-100.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.misc.SizeIterableInterval', name='size', priority=-100.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.statistics.StdDevRealType', name='stddev', priority=-100.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.statistics.SumRealType', name='sum', priority=-100.0, enabled=true, pluginType=Op
>> [DEBUG] - class='org.scijava.ui.swing.mdi.SwingMdiUI', name='swing-mdi', priority=-100.0, enabled=true, pluginType=UserInterface
>> [DEBUG] - class='net.imagej.ops.statistics.VarianceRealType', name='variance', priority=-100.0, enabled=true, pluginType=Op
>> [DEBUG] - class='org.scijava.text.io.TextIOPlugin', priority=-101.0, enabled=true, pluginType=IOPlugin
>> [DEBUG] - class='net.imagej.ops.map.MapI2I', name='map', priority=-101.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.plugins.tools.WandTool', name='Wand', description='Wand (tracing) tool', iconPath='/icons/tools/wand.png', priority=-110.0, enabled=false, pluginType=Tool
>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingTextTool', name='Text', description='Text tool', iconPath='/icons/tools/text.png', priority=-115.0, enabled=false, pluginType=Tool
>> [DEBUG] - class='net.imagej.plugins.tools.ZoomTool', name='Zoom', description='Magnifying glass (or use "+" and "-" keys)', iconPath='/icons/tools/zoom.png', priority=-200.0, enabled=true, pluginType=Tool
>> [DEBUG] - class='net.imagej.plugins.tools.PanTool', name='Pan', description='Scrolling tool (or press space bar and drag)', iconPath='/icons/tools/pan.png', priority=-201.0, enabled=true, pluginType=Tool
>> [DEBUG] - class='net.imagej.plugins.tools.PaintBrushTool', name='Paintbrush', description='Paintbrush Tool', iconPath='/icons/tools/paintbrush.png', priority=-300.0, enabled=true, pluginType=Tool
>> [DEBUG] - class='net.imagej.plugins.tools.PencilTool', name='Pencil', description='Pencil Tool', iconPath='/icons/tools/pencil.png', priority=-301.0, enabled=true, pluginType=Tool
>> [DEBUG] - class='net.imagej.plugins.tools.SprayCanTool', name='SprayCan', label='Spray Can', description='Spray Can Tool', iconPath='/icons/tools/spray-can.png', priority=-303.0, enabled=true, pluginType=Tool
>> [DEBUG] - class='net.imagej.plugins.tools.FloodFillTool', name='FloodFill', label='Flood Fill', description='Flood Fill Tool', iconPath='/icons/tools/flood-fill.png', priority=-304.0, enabled=true, pluginType=Tool
>> [DEBUG] - class='net.imagej.plugins.tools.ArrowTool', name='Arrow', description='Arrow Tool', iconPath='/icons/tools/arrow.png', priority=-305.0, enabled=false, pluginType=Tool
>> [DEBUG] - class='net.imagej.plugins.tools.FgColorTool', name='Foreground', iconPath='/icons/tools/blank.png', priority=-500.0, enabled=true, pluginType=Tool
>> [DEBUG] - class='net.imagej.plugins.tools.BgColorTool', name='Background', iconPath='/icons/tools/blankBlack.png', priority=-501.0, enabled=true, pluginType=Tool
>> [DEBUG] - class='io.scif.ome.formats.OMETIFFFormat', priority=-9998.0, enabled=true, pluginType=Format
>> [DEBUG] - class='io.scif.ome.formats.OMETIFFFormat$OMETIFFTranslator', priority=-9998.0, enabled=true, pluginType=Translator
>> [DEBUG] - class='org.scijava.module.process.LoadInputsPreprocessor', priority=-9999.0, enabled=true, pluginType=PreprocessorPlugin
>> [DEBUG] - class='io.scif.formats.TIFFFormat$TIFFTranslator', priority=-9999.0, enabled=true, pluginType=Translator
>> [DEBUG] - class='io.scif.formats.TIFFFormat', name='Tagged Image File Format', priority=-9999.0, enabled=true, pluginType=Format
>> [DEBUG] - class='org.scijava.ui.FilePreprocessor', priority=-9999.5, enabled=true, pluginType=PreprocessorPlugin
>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin
>> [DEBUG] - class='org.scijava.plugins.text.plain.PlainTextFormat', priority=-10000.0, enabled=true, pluginType=TextFormat
>> [DEBUG] - class='org.scijava.display.DisplayPostprocessor', priority=-10000.0, enabled=true, pluginType=PostprocessorPlugin
>> [DEBUG] - class='io.scif.DefaultTranslator', priority=-10000.0, enabled=true, pluginType=Translator
>> [DEBUG] - class='net.imagej.legacy.ui.LegacyInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin
>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin
>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingMdiInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin
>> [DEBUG] - class='net.imagej.ui.swing.overlay.DefaultJHotDrawAdapter', priority=-10000.0, enabled=true, pluginType=JHotDrawAdapter
>> [DEBUG] - class='org.scijava.platform.DefaultPlatform', name='Default', priority=-10000.0, enabled=true, pluginType=Platform
>> [DEBUG] - class='net.imagej.plugins.tools.AcceleratorHandler', name='Keyboard Shortcuts', priority=-10000.0, enabled=true, pluginType=Tool
>> [DEBUG] - class='io.scif.formats.MinimalTIFFFormat', name='Minimal TIFF', priority=-10000.0, enabled=true, pluginType=Format
>> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToImageFunctional', name='add', priority=-10000.0, enabled=true, pluginType=Op
>> [DEBUG] - class='net.imagej.ops.chunker.InterleavedChunker', name='chunker', priority=-10000.0, enabled=true, pluginType=Op
>> [DEBUG] - class='org.scijava.module.process.CheckInputsPreprocessor', priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin
>> [DEBUG] - class='org.scijava.module.process.SaveInputsPreprocessor', priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin
>> [DEBUG] - class='io.scif.formats.TIFFJAIFormat', name='Tagged Image File Format', priority=-10001.0, enabled=true, pluginType=Format
>> [DEBUG] - class='net.imagej.ops.misc.SizeIterable', name='size', priority=-Infinity, enabled=true, pluginType=Op
>> [DEBUG] Created service 'org.scijava.plugin.DefaultPluginService' in 51 ms
>> [DEBUG] Creating service: org.scijava.object.DefaultObjectService
>> log4j:WARN No appenders could be found for logger (org.bushe.swing.event.EventService).
>> log4j:WARN Please initialize the log4j system properly.
>> log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info.
>> [DEBUG] Created service 'org.scijava.object.DefaultObjectService' in 72 ms
>> [DEBUG] Creating service: org.scijava.module.DefaultModuleService
>> [DEBUG] Creating service: org.scijava.prefs.DefaultPrefService
>> [DEBUG] Created service 'org.scijava.prefs.DefaultPrefService' in 4 ms
>> [DEBUG] Creating service: org.scijava.convert.DefaultConvertService
>> [DEBUG] Created service 'org.scijava.convert.DefaultConvertService' in 4 ms
>> [DEBUG] Created service 'org.scijava.module.DefaultModuleService' in 14 ms
>> [DEBUG] Creating service: org.scijava.command.DefaultCommandService
>> [DEBUG] Created service 'org.scijava.command.DefaultCommandService' in 36 ms
>> [DEBUG] Created service 'org.scijava.script.DefaultScriptService' in 184 ms
>> [DEBUG] Creating service: net.imagej.lut.DefaultLUTService
>> [DEBUG] Creating service: net.imagej.DefaultDatasetService
>> [DEBUG] Creating service: io.scif.services.DefaultFormatService
>> [DEBUG] Created service 'io.scif.services.DefaultFormatService' in 3 ms
>> [DEBUG] Creating service: net.imagej.types.DefaultDataTypeService
>> [INFO] Found 11 DataType plugins.
>> [DEBUG] Created service 'net.imagej.types.DefaultDataTypeService' in 40 ms
>> [DEBUG] Created service 'net.imagej.DefaultDatasetService' in 61 ms
>> [DEBUG] Creating service: org.scijava.display.DefaultDisplayService
>> [DEBUG] Created service 'org.scijava.display.DefaultDisplayService' in 5 ms
>> [DEBUG] Creating service: net.imagej.display.DefaultImageDisplayService
>> [DEBUG] Created service 'net.imagej.display.DefaultImageDisplayService' in 3 ms
>> [DEBUG] Created service 'net.imagej.lut.DefaultLUTService' in 74 ms
>> [DEBUG] Creating service: net.imagej.legacy.DefaultLegacyService
>> [DEBUG] Creating service: net.imagej.display.DefaultOverlayService
>> [DEBUG] Creating service: org.scijava.options.DefaultOptionsService
>> [DEBUG] Created service 'org.scijava.options.DefaultOptionsService' in 2 ms
>> [DEBUG] Creating service: net.imagej.ui.awt.AWTRenderingService
>> [DEBUG] Created service 'net.imagej.ui.awt.AWTRenderingService' in 1 ms
>> [DEBUG] Created service 'net.imagej.display.DefaultOverlayService' in 10 ms
>> [DEBUG] Creating service: net.imagej.threshold.DefaultThresholdService
>> [DEBUG] Created service 'net.imagej.threshold.DefaultThresholdService' in 4 ms
>> [DEBUG] Creating service: org.scijava.menu.DefaultMenuService
>> [DEBUG] Created service 'org.scijava.menu.DefaultMenuService' in 3 ms
>> [DEBUG] Creating service: org.scijava.app.DefaultStatusService
>> [DEBUG] Creating service: org.scijava.app.DefaultAppService
>> [DEBUG] Created service 'org.scijava.app.DefaultAppService' in 4 ms
>> [DEBUG] Created service 'org.scijava.app.DefaultStatusService' in 5 ms
>> [INFO] Found 8 ScriptLanguage plugins.
>> [INFO] Found 0 scripts
>> [INFO] Overriding Upload Sample Image; identifier: command:net.imagej.plugins.commands.upload.SampleImageUploader; jar: file:/opt/Fiji.app/jars/imagej-plugins-commands-0.2.6.jar
>> [INFO] Overriding Test FlowCam; identifier: script:/opt/Fiji.app/plugins/FlowCam/Test_FlowCam.ijm; jar: file:/opt/Fiji.app/jars/scijava-common-2.33.0.jar
>> [DEBUG] Created service 'net.imagej.legacy.DefaultLegacyService' in 685 ms
>> [DEBUG] Creating service: fiji.DefaultFijiService
>> [DEBUG] Created service 'fiji.DefaultFijiService' in 1 ms
>> [DEBUG] Creating service: net.imglib2.meta.units.DefaultUnitService
>> [DEBUG] Created service 'net.imglib2.meta.units.DefaultUnitService' in 44 ms
>> [DEBUG] Creating service: net.imagej.ui.awt.AWTScreenCaptureService
>> [DEBUG] Created service 'net.imagej.ui.awt.AWTScreenCaptureService' in 2 ms
>> [DEBUG] Creating service: org.scijava.input.DefaultInputService
>> [DEBUG] Created service 'org.scijava.input.DefaultInputService' in 6 ms
>> [DEBUG] Creating service: org.scijava.ui.DefaultUIService
>> [DEBUG] Creating service: org.scijava.platform.DefaultPlatformService
>> [DEBUG] Creating service: org.scijava.platform.DefaultAppEventService
>> [DEBUG] Created service 'org.scijava.platform.DefaultAppEventService' in 2 ms
>> [INFO] Found 1 Platform plugins.
>> [DEBUG] Configuring platform: org.scijava.platform.DefaultPlatform
>> [DEBUG] Created service 'org.scijava.platform.DefaultPlatformService' in 11 ms
>> [DEBUG] Creating service: org.scijava.tool.DefaultToolService
>> [DEBUG] Created service 'org.scijava.tool.DefaultToolService' in 5 ms
>> [DEBUG] Created service 'org.scijava.ui.DefaultUIService' in 23 ms
>> [DEBUG] Creating service: org.scijava.ui.dnd.DefaultDragAndDropService
>> [DEBUG] Created service 'org.scijava.ui.dnd.DefaultDragAndDropService' in 5 ms
>> [DEBUG] Creating service: org.scijava.text.DefaultTextService
>> [DEBUG] Created service 'org.scijava.text.DefaultTextService' in 3 ms
>> [DEBUG] Creating service: org.scijava.io.DefaultRecentFileService
>> [DEBUG] Created service 'org.scijava.io.DefaultRecentFileService' in 61 ms
>> [DEBUG] Creating service: org.scijava.io.DefaultIOService
>> [DEBUG] Created service 'org.scijava.io.DefaultIOService' in 4 ms
>> [DEBUG] Creating service: org.scijava.widget.DefaultWidgetService
>> [INFO] Found 22 InputWidget plugins.
>> [DEBUG] Created service 'org.scijava.widget.DefaultWidgetService' in 6 ms
>> [DEBUG] Creating service: org.scijava.welcome.DefaultWelcomeService
>> [DEBUG] Created service 'org.scijava.welcome.DefaultWelcomeService' in 2 ms
>> [DEBUG] Creating service: org.scijava.script.DefaultScriptHeaderService
>> [DEBUG] Created service 'org.scijava.script.DefaultScriptHeaderService' in 2 ms
>> [DEBUG] Creating service: org.scijava.event.DefaultEventHistory
>> [DEBUG] Created service 'org.scijava.event.DefaultEventHistory' in 2 ms
>> [DEBUG] Creating service: org.scijava.console.DefaultConsoleService
>> [DEBUG] Created service 'org.scijava.console.DefaultConsoleService' in 2 ms
>> [DEBUG] Creating service: net.imagej.operator.DefaultCalculatorService
>> [DEBUG] Created service 'net.imagej.operator.DefaultCalculatorService' in 2 ms
>> [DEBUG] Creating service: net.imagej.autoscale.DefaultAutoscaleService
>> [DEBUG] Created service 'net.imagej.autoscale.DefaultAutoscaleService' in 3 ms
>> [DEBUG] Creating service: net.imagej.sampler.DefaultSamplerService
>> [DEBUG] Created service 'net.imagej.sampler.DefaultSamplerService' in 3 ms
>> [DEBUG] Creating service: net.imagej.display.DefaultZoomService
>> [DEBUG] Created service 'net.imagej.display.DefaultZoomService' in 2 ms
>> [DEBUG] Creating service: net.imagej.display.DefaultWindowService
>> [DEBUG] Created service 'net.imagej.display.DefaultWindowService' in 2 ms
>> [DEBUG] Creating service: net.imagej.DefaultImgPlusService
>> [DEBUG] Created service 'net.imagej.DefaultImgPlusService' in 1 ms
>> [DEBUG] Creating service: net.imagej.ui.DefaultImageJUIService
>> [DEBUG] Created service 'net.imagej.ui.DefaultImageJUIService' in 1 ms
>> [DEBUG] Creating service: net.imagej.measure.DefaultStatisticsService
>> [DEBUG] Created service 'net.imagej.measure.DefaultStatisticsService' in 3 ms
>> [DEBUG] Creating service: net.imagej.measure.DefaultMeasurementService
>> [DEBUG] Created service 'net.imagej.measure.DefaultMeasurementService' in 1 ms
>> [DEBUG] Creating service: net.imagej.animation.DefaultAnimationService
>> [DEBUG] Created service 'net.imagej.animation.DefaultAnimationService' in 4 ms
>> [DEBUG] Creating service: io.scif.io.DefaultNIOService
>> [DEBUG] Created service 'io.scif.io.DefaultNIOService' in 2 ms
>> [DEBUG] Creating service: io.scif.img.converters.DefaultPlaneConverterService
>> [DEBUG] Created service 'io.scif.img.converters.DefaultPlaneConverterService' in 6 ms
>> [DEBUG] Creating service: io.scif.img.DefaultImgUtilityService
>> [DEBUG] Created service 'io.scif.img.DefaultImgUtilityService' in 5 ms
>> [DEBUG] Creating service: io.scif.gui.DefaultGUIService
>> [DEBUG] Created service 'io.scif.gui.DefaultGUIService' in 3 ms
>> [DEBUG] Creating service: io.scif.xml.DefaultXMLService
>> [DEBUG] Created service 'io.scif.xml.DefaultXMLService' in 22 ms
>> [DEBUG] Creating service: io.scif.refs.DefaultRefManagerService
>> [DEBUG] Created service 'io.scif.refs.DefaultRefManagerService' in 1 ms
>> [DEBUG] Creating service: io.scif.services.DefaultTranslatorService
>> [DEBUG] Created service 'io.scif.services.DefaultTranslatorService' in 2 ms
>> [DEBUG] Creating service: io.scif.codec.DefaultCodecService
>> [DEBUG] Created service 'io.scif.codec.DefaultCodecService' in 1 ms
>> [DEBUG] Creating service: io.scif.img.cell.cache.MapDBCache
>> [DEBUG] Created service 'io.scif.img.cell.cache.MapDBCache' in 8 ms
>> [DEBUG] Creating service: io.scif.DefaultMetadataService
>> [DEBUG] Created service 'io.scif.DefaultMetadataService' in 0 ms
>> [DEBUG] Creating service: io.scif.services.DefaultFilePatternService
>> [DEBUG] Created service 'io.scif.services.DefaultFilePatternService' in 2 ms
>> [DEBUG] Creating service: io.scif.formats.tiff.DefaultTiffService
>> [DEBUG] Created service 'io.scif.formats.tiff.DefaultTiffService' in 3 ms
>> [DEBUG] Creating service: io.scif.services.DefaultLocationService
>> [DEBUG] Created service 'io.scif.services.DefaultLocationService' in 1 ms
>> [DEBUG] Creating service: io.scif.services.JAIIIOServiceImpl
>> [DEBUG] Created service 'io.scif.services.JAIIIOServiceImpl' in 24 ms
>> [DEBUG] Creating service: io.scif.formats.qt.DefaultQTJavaService
>> [DEBUG] Created service 'io.scif.formats.qt.DefaultQTJavaService' in 5 ms
>> [DEBUG] Creating service: org.scijava.ui.swing.SwingIconService
>> [DEBUG] Created service 'org.scijava.ui.swing.SwingIconService' in 3 ms
>> [DEBUG] Creating service: org.scijava.plugins.scripting.java.DefaultJavaService
>> [DEBUG] Created service 'org.scijava.plugins.scripting.java.DefaultJavaService' in 2 ms
>> [DEBUG] Creating service: net.imagej.ui.swing.overlay.JHotDrawService
>> [DEBUG] Created service 'net.imagej.ui.swing.overlay.JHotDrawService' in 3 ms
>> [DEBUG] Creating service: net.imagej.updater.DefaultUpdateService
>> [DEBUG] Created service 'net.imagej.updater.DefaultUpdateService' in 7 ms
>> [DEBUG] Creating service: net.imagej.updater.DefaultUploaderService
>> [DEBUG] Created service 'net.imagej.updater.DefaultUploaderService' in 1 ms
>> [DEBUG] Creating service: net.imagej.ops.DefaultOpService
>> [DEBUG] Creating service: net.imagej.ops.DefaultOpMatchingService
>> [DEBUG] Created service 'net.imagej.ops.DefaultOpMatchingService' in 2 ms
>> [DEBUG] Created service 'net.imagej.ops.DefaultOpService' in 5 ms
>> [DEBUG] Creating service: net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor
>> [DEBUG] Created service 'net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor' in 1 ms
>> [DEBUG] Creating service: io.scif.ome.services.DefaultOMEXMLService
>> [DEBUG] Created service 'io.scif.ome.services.DefaultOMEXMLService' in 30 ms
>> [DEBUG] Creating service: io.scif.ome.services.DefaultOMEMetadataService
>> [DEBUG] Created service 'io.scif.ome.services.DefaultOMEMetadataService' in 11 ms
>> [DEBUG] Creating service: net.imagej.display.DummyScreenCaptureService
>> [DEBUG] Created service 'net.imagej.display.DummyScreenCaptureService' in 0 ms
>> [DEBUG] Creating service: net.imagej.render.DummyRenderingService
>> [DEBUG] Created service 'net.imagej.render.DummyRenderingService' in 1 ms
>> [DEBUG] Creating service: io.scif.services.DefaultInitializeService
>> [DEBUG] Created service 'io.scif.services.DefaultInitializeService' in 3 ms
>> [DEBUG] Received command line arguments:
>> [DEBUG] publish(
>> context = org.scijava.Context@7c92eb86
>> consumed = false,null,null), called from non-EDT Thread:null
>> [DEBUG] -port7
>> [DEBUG] -macro
>> [DEBUG] /home/btupper/hello.ijm
>> [DEBUG] -batch
>> [INFO] Found 11 ConsoleArgument plugins.
>> [ERROR] Skipping unsupported option -port7
>> [DEBUG] publish(
>> context = org.scijava.Context@7c92eb86
>> consumed = false,null,null), called from non-EDT Thread:null
>> [INFO] Discovered user interface: net.imagej.legacy.ui.LegacyUI
>> [INFO] Discovered user interface: org.scijava.ui.swing.sdi.SwingSDIUI
>> [INFO] Discovered user interface: org.scijava.ui.awt.AWTUI
>> [INFO] Discovered user interface: org.scijava.ui.swing.mdi.SwingMdiUI
>> [btupper@fcm-flow ~]$
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html

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Re: Warning/Error using Fiji on linux

BenTupper
On Dec 16, 2014, at 9:43 PM, Ben Tupper <[hidden email]> wrote:

>
> On Dec 16, 2014, at 7:19 PM, Rasband, Wayne (NIH/NIMH) [E] <[hidden email]> wrote:
>
>> On Dec 16, 2014, at 3:11 PM, Ben Tupper <[hidden email]> wrote:
>>>
>>> Hello,
>>>
>>> I'm learning to use Fiji in a headless CentOS 6 environment.  I first updated fiji using...
>>>
>>> $ fiji --update update
>>>
>>>
>>> I have a simple macro, '~/hello.ijm', adapted from this one... http://rsb.info.nih.gov/ij/macros/SaveTextFileDemo.txt
>>>
>>> //
>>> //START ~/hello.ijm
>>> //
>>> f = File.open("/home/btupper/hello.txt");
>>> // use d2s() function (double to string) to specify decimal places
>>> for (i=0; i<=2*PI; i+=0.01)
>>>  print(f, d2s(i,6) + "  \t" + d2s(sin(i),6) + " \t" + d2s(cos(i),6));
>>> //
>>> //FINISH ~/hello.ijm
>>> //
>>>
>>> I then run the macro from the command line. The macro successfully creates and populates the '~/hello.txt' file.  However, I get log4j warnings and an error as shown below.  (Note, I have pasted in below the entire output when I set the --debug flag.)
>>
>> You should report this bug using Fiji’s Help>Report a Bug command. The bug report will automatically provide more information about your setup and it will help the Fiji developers keep track of your bug report so that it is not forgotten. http://imagej.net/Bugs
>>


It appears that this is identical to an existing bug report: http://fiji.sc/bugzilla/show_bug.cgi?id=961

I have been away from ImageJ for so long - I am astounded by the changes and still a bit lost.

Cheers,
Ben





>> -wayne
>>
>>> [btupper@fcm-flow ~]$ fiji --headless -macro /home/btupper/hello.ijm
>>> log4j:WARN No appenders could be found for logger (org.bushe.swing.event.EventService).
>>> log4j:WARN Please initialize the log4j system properly.
>>> log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info.
>>> [ERROR] Skipping unsupported option -port7
>>>
>>> Here is a bit more info about the Fiji installation.  
>>>
>>> [btupper@fcm-flow ~]$ fiji --print-java-home
>>> /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24/
>>> [btupper@fcm-flow ~]$ fiji --print-ij-dir
>>> /opt/Fiji.app
>>>
>>>
>>> Do I need to worry about the warnings?  I can't locate any instructions for initializing log4j on the Fiji website.  I have found these 3rd party instructions [ http://www.javabeat.net/baisc-steps-to-configure-log4j-using-xml-and-properties-file/ ] but I have no idea if the are appropriate for what Fiji requires.  
>>>
>>> I also have no idea how to resolve the error.  
>>>
>
> Ah - will do.  I assumed that it was something in my own setup - I just noticed that log4j is distributed with Fiji in the Fiji/jars subdirectory.
>
>
>>> Any suggestions?
>>>
>>> Thanks!
>>> Ben
>>>
>>>
>>> P.S. Below is the command and output with --debug set
>>>
>>> [btupper@fcm-flow ~]$ fiji --debug --headless -macro /home/btupper/hello.ijm
>>> Available RAM: 3727MB, using 3/4 of that: 2796MB
>>> JRE not found in '/opt/Fiji.app/jre'
>>> JAVA_HOME contains a JRE: '/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre'
>>> Re-executing with correct library lookup path (/opt/Fiji.app/lib/linux64:/opt/Fiji.app/mm/linux64)
>>> Available RAM: 3727MB, using 3/4 of that: 2796MB
>>> JRE not found in '/opt/Fiji.app/jre'
>>> JAVA_HOME contains a JRE: '/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre'
>>> Appending missing -batch flag for headless operation.
>>> java -Dpython.cachedir.skip=true -Dplugins.dir=/opt/Fiji.app -Xmx2796m -Djava.awt.headless=true -Dapple.awt.UIElement=true -Xincgc -XX:PermSize=128m -Dsun.java.command=ImageJ -Djava.class.path=/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar -Dimagej.dir=/opt/Fiji.app -Dij.dir=/opt/Fiji.app -Dfiji.dir=/opt/Fiji.app -Dfiji.defaultLibPath=lib/amd64/server/libjvm.so -Dfiji.executable=/opt/Fiji.app/fiji-linux64 -Dij.executable=/opt/Fiji.app/fiji-linux64 -Djava.library.path=/opt/Fiji.app/lib/linux64:/opt/Fiji.app/mm/linux64 -Dij.debug=true -Dscijava.log.level=debug net.imagej.launcher.ClassLauncher -classpath /opt/Fiji.app/jars/ij-1.49m.jar fiji.Main -port7 -macro /home/btupper/hello.ijm -batch
>>> Using JAVA_HOME /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre
>>> Opening Java library /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre/lib/amd64/server/libjvm.so
>>> Adding option: -Djava.home=/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24/
>>> Launching main class fiji.Main with parameters [-port7, -macro, /home/btupper/hello.ijm, -batch]
>>> Class loader = sun.misc.Launcher$AppClassLoader@b92d342
>>> ij1.plugin.dirs: null
>>> $HOME/.plugins: /home/btupper/.plugins does not exist
>>> Launching main class net.imagej.Main with parameters [-port7, -macro, /home/btupper/hello.ijm, -batch]
>>> Class loader = sun.misc.Launcher$AppClassLoader@b92d342
>>> Checking class loader: sun.misc.Launcher$AppClassLoader@b92d342
>>> Checking URL: file:/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar
>>> Not Eclipse because first entry is: file:/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar
>>> [DEBUG] Creating service: org.scijava.event.DefaultEventService
>>> [DEBUG] Creating service: org.scijava.log.StderrLogService
>>> [DEBUG] Created service 'org.scijava.log.StderrLogService' in 2 ms
>>> [DEBUG] Creating service: org.scijava.thread.DefaultThreadService
>>> [DEBUG] Created service 'org.scijava.thread.DefaultThreadService' in 1 ms
>>> [DEBUG] Created service 'org.scijava.event.DefaultEventService' in 47 ms
>>> [DEBUG] Creating service: org.scijava.script.DefaultScriptService
>>> [DEBUG] Creating service: org.scijava.plugin.DefaultPluginService
>>> [INFO] Found 777 plugins.
>>> [DEBUG] - class='org.scijava.module.process.DebugPreprocessor', priority=Infinity, enabled=true, pluginType=PreprocessorPlugin
>>> [DEBUG] - class='org.scijava.module.process.DebugPostprocessor', priority=Infinity, enabled=true, pluginType=PostprocessorPlugin
>>> [DEBUG] - class='net.imagej.plugins.tools.KonamiHandler', name='Konami', priority=Infinity, enabled=true, pluginType=Tool
>>> [DEBUG] - class='org.scijava.event.DefaultEventService', priority=100000.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.module.process.ValidityPreprocessor', priority=10001.0, enabled=true, pluginType=PreprocessorPlugin
>>> [DEBUG] - class='org.scijava.ui.UIPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
>>> [DEBUG] - class='org.scijava.display.ActiveDisplayPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
>>> [DEBUG] - class='org.scijava.module.process.GatewayPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
>>> [DEBUG] - class='org.scijava.module.process.ServicePreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
>>> [DEBUG] - class='net.imagej.display.ActiveImagePreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
>>> [DEBUG] - class='net.imagej.legacy.plugin.ActiveImagePlusPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
>>> [DEBUG] - class='io.scif.bf.BioFormatsFormat', name='Bio-Formats Compatibility Format', priority=10000.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='net.imagej.ops.slicer.SlicewiseRAI2RAI', name='slicemapper', priority=10000.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.arithmetic.add.parallel.AddConstantToArrayDoubleImageP', name='add', priority=111.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.arithmetic.add.parallel.AddConstantToArrayByteImageP', name='add', priority=110.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='io.scif.ome.translators.OMETIFFTranslator$OMEtoOMETIFFTranslator', priority=101.0, enabled=true, pluginType=ToOMETranslator
>>> [DEBUG] - class='io.scif.ome.translators.OMETIFFTranslator$OMETIFFtoOMETranslator', priority=101.0, enabled=true, pluginType=FromOMETranslator
>>> [DEBUG] - class='io.scif.bf.ome.BioFormatsTranslator$BioFormatsOMETranslator', priority=101.0, enabled=true, pluginType=ToOMETranslator
>>> [DEBUG] - class='net.imagej.app.ToplevelImageJApp', name='ImageJ', priority=101.0, enabled=true, pluginType=App
>>> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToArrayDoubleImage', name='add', priority=101.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTMessageWidget', priority=100.0, enabled=true, pluginType=InputWidget
>>> [DEBUG] - class='org.scijava.module.process.InitPreprocessor', priority=100.0, enabled=true, pluginType=PreprocessorPlugin
>>> [DEBUG] - class='org.scijava.script.DefaultScriptService', priority=100.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.lut.DefaultLUTService', priority=100.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.legacy.display.LegacyImageDisplayViewer', priority=100.0, enabled=true, pluginType=DisplayViewer
>>> [DEBUG] - class='net.imagej.legacy.display.LegacyTextDisplayViewer', priority=100.0, enabled=true, pluginType=DisplayViewer
>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingMessageWidget', priority=100.0, enabled=true, pluginType=InputWidget
>>> [DEBUG] - class='net.imagej.ui.swing.overlay.RectangleJHotDrawAdapter', priority=100.0, enabled=true, pluginType=JHotDrawAdapter
>>> [DEBUG] - class='net.imagej.ui.swing.overlay.ThresholdJHotDrawAdapter', priority=100.0, enabled=true, pluginType=JHotDrawAdapter
>>> [DEBUG] - class='io.scif.ome.translators.BMPTranslator$BMPOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
>>> [DEBUG] - class='io.scif.ome.translators.MicromanagerTranslator$MicromanagerOMETranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator
>>> [DEBUG] - class='io.scif.ome.translators.OBFTranslator$OBFOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
>>> [DEBUG] - class='io.scif.ome.translators.TIFFTranslator$TIFFOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
>>> [DEBUG] - class='io.scif.ome.translators.TIFFTranslator$OMETIFFTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator
>>> [DEBUG] - class='io.scif.ome.translators.APNGTranslator$OMEAPNGTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator
>>> [DEBUG] - class='io.scif.ome.translators.APNGTranslator$APNGOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
>>> [DEBUG] - class='io.scif.ome.translators.ICSTranslator$OMEICSTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator
>>> [DEBUG] - class='io.scif.ome.translators.ICSTranslator$ICSOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
>>> [DEBUG] - class='io.scif.ome.translators.DICOMTranslator$DICOMOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
>>> [DEBUG] - class='io.scif.ome.translators.NRRDTranslator$NRRDOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator
>>> [DEBUG] - class='io.scif.ome.translators.EPSTranslator$OMEEPSTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator
>>> [DEBUG] - class='net.imagej.operator.OpAdd', name='Add', priority=100.0, enabled=true, pluginType=CalculatorOp
>>> [DEBUG] - class='net.imagej.app.ImageJApp', name='ImageJ', priority=100.0, enabled=true, pluginType=App
>>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingRectangleTool', name='Rectangle', description='Rectangular overlays', iconPath='/icons/tools/rectangle.png', priority=100.0, enabled=true, pluginType=Tool
>>> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToArrayByteImage', name='add', priority=100.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$AddOp', name='add', priority=100.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$DivideOp', name='divide', priority=100.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.legacy.ui.LegacyUI', name='legacy', priority=100.0, enabled=true, pluginType=UserInterface
>>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$MultiplyOp', name='multiply', priority=100.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$SubtractOp', name='subtract', priority=100.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ui.swing.overlay.EllipseJHotDrawAdapter', priority=99.0, enabled=true, pluginType=JHotDrawAdapter
>>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingEllipseTool', name='Oval', description='Oval selections', iconPath='/icons/tools/oval.png', priority=99.0, enabled=true, pluginType=Tool
>>> [DEBUG] - class='net.imagej.operator.OpSubtract', name='Subtract', priority=99.0, enabled=true, pluginType=CalculatorOp
>>> [DEBUG] - class='net.imagej.ui.swing.overlay.GeneralPathJHotDrawAdapter', priority=98.5, enabled=true, pluginType=JHotDrawAdapter
>>> [DEBUG] - class='net.imagej.ui.swing.overlay.PolygonJHotDrawAdapter', priority=98.0, enabled=true, pluginType=JHotDrawAdapter
>>> [DEBUG] - class='net.imagej.operator.OpMultiply', name='Multiply', priority=98.0, enabled=true, pluginType=CalculatorOp
>>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPolygonTool', name='Polygon', description='Polygon overlays', iconPath='/icons/tools/polygon.png', priority=98.0, enabled=true, pluginType=Tool
>>> [DEBUG] - class='net.imagej.ui.swing.overlay.LineJHotDrawAdapter', priority=97.0, enabled=true, pluginType=JHotDrawAdapter
>>> [DEBUG] - class='net.imagej.operator.OpDivide', name='Divide', priority=97.0, enabled=true, pluginType=CalculatorOp
>>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingLineTool', name='Line', description='Straight line overlays', iconPath='/icons/tools/line.png', priority=97.0, enabled=true, pluginType=Tool
>>> [DEBUG] - class='net.imagej.ui.swing.overlay.PolylineJHotDrawAdapter', priority=96.0, enabled=true, pluginType=JHotDrawAdapter
>>> [DEBUG] - class='net.imagej.operator.OpAnd', name='AND', priority=96.0, enabled=true, pluginType=CalculatorOp
>>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPolylineTool', name='Polyline', description='Polyline overlays', iconPath='/icons/tools/polyline.png', priority=96.0, enabled=true, pluginType=Tool
>>> [DEBUG] - class='net.imagej.ui.swing.overlay.AngleJHotDrawAdapter', priority=95.0, enabled=true, pluginType=JHotDrawAdapter
>>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingAngleTool', name='Angle', description='Angle overlays', iconPath='/icons/tools/angle.png', priority=95.0, enabled=true, pluginType=Tool
>>> [DEBUG] - class='net.imagej.operator.OpOr', name='OR', priority=95.0, enabled=true, pluginType=CalculatorOp
>>> [DEBUG] - class='net.imagej.ui.swing.overlay.PointJHotDrawOverlay', priority=94.0, enabled=true, pluginType=JHotDrawAdapter
>>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPointTool', name='Point', description='Point overlays', iconPath='/icons/tools/point.png', priority=94.0, enabled=true, pluginType=Tool
>>> [DEBUG] - class='net.imagej.operator.OpXor', name='XOR', priority=94.0, enabled=true, pluginType=CalculatorOp
>>> [DEBUG] - class='net.imagej.operator.OpMin', name='Min', priority=93.0, enabled=true, pluginType=CalculatorOp
>>> [DEBUG] - class='net.imagej.operator.OpMax', name='Max', priority=92.0, enabled=true, pluginType=CalculatorOp
>>> [DEBUG] - class='net.imagej.operator.OpAverage', name='Average', priority=91.0, enabled=true, pluginType=CalculatorOp
>>> [DEBUG] - class='net.imagej.operator.OpDifference', name='Difference', priority=90.0, enabled=true, pluginType=CalculatorOp
>>> [DEBUG] - class='net.imagej.operator.OpCopy', name='Copy', priority=89.0, enabled=true, pluginType=CalculatorOp
>>> [DEBUG] - class='net.imagej.operator.OpTransparentZero', name='Transparent-zero', priority=88.0, enabled=true, pluginType=CalculatorOp
>>> [DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.FastLAPTrackerFactory', priority=10.0, enabled=true, pluginType=SpotTrackerFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.SimpleFastLAPTrackerFactory', priority=10.0, enabled=true, pluginType=SpotTrackerFactory
>>> [DEBUG] - class='net.imagej.legacy.DefaultLegacyService', priority=1.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingChoiceRadioWidget', priority=1.0, enabled=true, pluginType=InputWidget
>>> [DEBUG] - class='net.imagej.ops.onthefly.JavassistOptimizer', priority=1.0, enabled=true, pluginType=Optimizer
>>> [DEBUG] - class='fiji.plugin.trackmate.visualization.threedviewer.SpotDisplayer3DFactory', priority=1.0, enabled=true, pluginType=ViewFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.tracking.kdtree.NearestNeighborTrackerFactory', priority=1.0, enabled=true, pluginType=SpotTrackerFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotContrastAndSNRAnalyzerFactory', priority=1.0, enabled=true, pluginType=SpotAnalyzerFactory
>>> [DEBUG] - class='net.imagej.ops.invert.InvertII', name='invert', priority=1.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToDouble', name='add', priority=0.6, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToLong', name='add', priority=0.5, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToFloat', name='add', priority=0.4, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToInteger', name='add', priority=0.3, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToShort', name='add', priority=0.2, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToByte', name='add', priority=0.1, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.AndDataValuesWith', menu='Process > Math > AND...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.app.AboutImageJ', label='About ImageJ...', menu='Help > About ImageJ...', iconPath='/icons/commands/information.png', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.AbsDataValues', menu='Process > Math > Abs...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionAdaptiveMedian', menu='Process > Noise > Noise Reduction > Adaptive Median', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.AddAxis', menu='Image > Axes > Add Axis...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.AddData', menu='Image > Data > Add Data...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.overlay.AddImage', menu='Image > Overlay > Add Image', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.AddNoiseToDataValues', menu='Process > Noise > Add Noise...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.AddSpecifiedNoiseToDataValues', menu='Process > Noise > Add Specified Noise...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.AddToDataValues', menu='Process > Math > Add...', iconPath='/icons/commands/sum.png', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionAlphaTrimmedMean', menu='Process > Noise > Noise Reduction > Alpha Trimmed Mean', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.animation.AnimationOptions', menu='Image > Animation > Animation Options...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.options.OptionsAppearance', menu='Edit > Options > Appearance...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>> [DEBUG] - class='net.imagej.ops.commands.threshold.GlobalThresholder', menu='Image > Threshold > Apply Threshold', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.options.OptionsArrowTool', menu='Edit > Options > Arrow Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>> [DEBUG] - class='net.imagej.plugins.commands.display.AutoContrast', menu='Image > Adjust > Auto-Contrast', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.axispos.AxisPositionBackward', menu='Image > Axes > Axis Position Backward', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.axispos.AxisPositionForward', menu='Image > Axes > Axis Position Forward', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.misc.Benchmark', menu='Plugins > Utilities > Benchmark', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.Binner', menu='Image > Transform > Bin...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.binary.Binarize', menu='Process > Binary > Binarize...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.display.interactive.BrightnessContrast', menu='Image > Adjust > Brightness/Contrast...', iconPath='/icons/commands/contrast.png', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.debug.ButtonDemo', menu='Plugins > Sandbox > Button Demo', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.display.CaptureImage', menu='Plugins > Utilities > Capture Image', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.display.CaptureScreen', menu='Plugins > Utilities > Capture Screen', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.typechange.TypeChanger', menu='Image > Type > Change...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.display.ChannelsTool', menu='Image > Color > Channels Tool...', iconPath='/icons/commands/color_wheel.png', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.options.OptionsChannels', menu='Edit > Options > Channels...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>> [DEBUG] - class='org.scijava.plugins.commands.io.ClearRecent', label='Clear Recent', menu='File > Open Recent > Clear List', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='org.scijava.plugins.commands.display.Close', menu='File > Close', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.binary.CloseBinaryImage', menu='Process > Binary > Close', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='org.scijava.plugins.commands.display.CloseAll', menu='File > Close All', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.options.OptionsCompatibility', menu='Edit > Options > Compatibility...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>> [DEBUG] - class='net.imagej.options.OptionsCompiler', menu='Edit > Options > Compiler...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionContraharmonicMean', menu='Process > Noise > Noise Reduction > Contraharmonic Mean', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.options.OptionsConversions', menu='Edit > Options > Conversions...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>> [DEBUG] - class='net.imagej.ops.commands.convert.ConvertImgPlus', menu='Image > Convert', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.ops.commands.convolve.Convolve', menu='Image > Convolve', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.app.CopyToSystem', menu='Edit > Copy To System', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.binary.CreateMask', menu='Process > Binary > Create Mask...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.app.CreateShortcut', menu='Plugins > Shortcuts > Create Shortcut...', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.CropImage', menu='Image > Crop', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.options.OptionsDicom', menu='Edit > Options > DICOM...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>> [DEBUG] - class='net.imagej.options.OptionsOverlay', label='Default Overlay Settings', menu='Image > Overlay > Overlay Options...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.DeleteAxis', menu='Image > Axes > Delete Axis...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.DeleteData', menu='Image > Data > Delete Data...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.display.interactive.DeleteThreshold', menu='Image > Adjust > Delete Threshold', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.display.DeselectOverlays', menu='Edit > Selection > Deselect Overlays', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='org.scijava.ui.swing.commands.DialogPromptDemo', menu='Plugins > Sandbox > Dialog Prompt Demo', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.binary.DilateBinaryImage', menu='Process > Binary > Dilate', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.DivideDataValuesBy', menu='Process > Math > Divide...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='org.scijava.plugins.commands.debug.DumpStack', menu='Plugins > Debug > Dump Stack', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.DuplicateImage', menu='Image > Duplicate', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.DuplicateImageContext', menu='Duplicate...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsEast', menu='Process > Shadows > East', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.EditAxes', menu='Image > Axes > Edit Axes...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.EquationDataValues', menu='Process > Math > Equation...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.binary.ErodeBinaryImage', menu='Process > Binary > Erode', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.ExpDataValues', menu='Process > Math > Exp...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.FillDataValues', menu='Edit > Fill', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='org.scijava.ui.swing.commands.CommandFinder', menu='Plugins > Utilities > Find Commands...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.neigh.FindEdges', menu='Process > Find Edges', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.display.Flatten', menu='Image > Overlay > Flatten', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.FlipAxis', menu='Image > Transform > Flip Axis', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.rotate.FlipHorizontally', menu='Image > Transform > Flip Horizontally', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.rotate.FlipVertically', menu='Image > Transform > Flip Vertically', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.tools.FloodFillToolConfig', label='Flood Fill Tool', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.options.OptionsFont', menu='Edit > Options > Fonts...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>> [DEBUG] - class='net.imagej.plugins.commands.overlay.FromOverlayManager', menu='Image > Overlay > From Overlay Manager', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.GammaDataValues', menu='Process > Math > Gamma...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.GaussianBlur', menu='Process > Filters > Gaussian Blur...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionGeometricMean', menu='Process > Noise > Noise Reduction > Geometric Mean', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionHarmonicMean', menu='Process > Noise > Noise Reduction > Harmonic Mean', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.display.HistogramPlot', menu='Analyze > Histogram Plot', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.calculator.ImageCalculator', menu='Process > Image Calculator...', iconPath='/icons/commands/calculator.png', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.io.OpenDataset', menu='File > Import > Image... ', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.io.SaveDataset', menu='File > Export > Image...  ', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.app.ImageJWebsite', menu='Help > ImageJ Website...', iconPath='/icons/commands/world_link.png', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.legacy.ImageJ2Options', label='ImageJ2 Options', menu='Edit > Options > ImageJ2...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>> [DEBUG] - class='net.imagej.options.OptionsInputOutput', menu='Edit > Options > Input/Output...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>> [DEBUG] - class='net.imagej.plugins.commands.debug.InspectImg', menu='Plugins > Debug > Inspect Image', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='org.scijava.ui.swing.commands.InspectObjects', menu='Plugins > Debug > Inspect Objects', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='org.scijava.plugins.commands.debug.InvalidCommandDemo$InvalidCommand', menu='Plugins > Debug > Invalid Command', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.InvertDataValues', menu='Edit > Invert...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.lut.LUTSelector', label='LUT Selector', menu='Image > Lookup Tables > Select...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.overlay.OverlayLabels', menu='Image > Overlay > Labels...', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.options.OptionsLineWidth', menu='Edit > Options > Line Width...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>> [DEBUG] - class='net.imagej.plugins.commands.app.ListShortcuts', menu='Plugins > Shortcuts > List Shortcuts...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.LogDataValues', menu='Process > Math > Log...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='org.scijava.ui.swing.options.OptionsLookAndFeel', menu='Edit > Options > Look and Feel...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>> [DEBUG] - class='net.imagej.plugins.commands.binary.MakeBinary', menu='Process > Binary > Make Binary...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.overlay.ConvertToMask', menu='Process > Binary > Make Mask Overlay...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.debug.MandelbrotSetImage', menu='Plugins > Sandbox > Mandelbrot Set', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.MaxDataValues', menu='Process > Math > Max...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMax', menu='Process > Noise > Noise Reduction > Maximum', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMean', menu='Process > Noise > Noise Reduction > Mean', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.debug.MeasurementDemo', menu='Plugins > Sandbox > Measurement Demo', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMedian', menu='Process > Noise > Noise Reduction > Median', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.options.OptionsMemoryAndThreads', menu='Edit > Options > Memory & Threads...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMidpoint', menu='Process > Noise > Noise Reduction > Midpoint', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.MinDataValues', menu='Process > Math > Min...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMin', menu='Process > Noise > Noise Reduction > Minimum', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.options.OptionsMisc', menu='Edit > Options > Misc...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>> [DEBUG] - class='net.imagej.legacy.plugin.MixedWorldCommand', menu='Plugins > Sandbox > Mixed World Command', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.debug.MultidimImage', menu='Plugins > Sandbox > Multidimensional Test Image', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.MultiplyDataValuesBy', menu='Process > Math > Multiply...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.NanBackground', menu='Process > Math > NaN Background', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.io.NewImage', label='New Image...', menu='File > New > Image...', iconPath='/icons/commands/picture.png', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNorth', menu='Process > Shadows > North', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNortheast', menu='Process > Shadows > Northeast', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNorthwest', menu='Process > Shadows > Northwest', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.OrDataValuesWith', menu='Process > Math > OR...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.binary.OpenBinaryImage', menu='Process > Binary > Open', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='org.scijava.plugins.commands.io.OpenFile', menu='File > Open...', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomOriginalScale', menu='Image > Zoom > Original Scale', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.display.interactive.OrthogonalViews', menu='Image > Stacks > Orthogonal Views', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.ui.swing.commands.OverlayManager', menu='Image > Overlay > Overlay Manager', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.overlay.OverlayProperties', label='Overlay Properties...', menu='Image > Overlay > Properties...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.tools.PaintBrushToolConfig', label='Paintbrush Tool', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='org.scijava.plugins.commands.debug.ParamAssignOrder', menu='Plugins > Sandbox > Parameter Assignment Order', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.tools.PencilToolConfig', label='Pencil Tool', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='fiji.DefaultFijiService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='fiji.patches.FijiAppConfiguration', priority=0.0, enabled=true, pluginType=LegacyAppConfiguration
>>> [DEBUG] - class='fiji.patches.OldLegacyEditor', priority=0.0, enabled=true, pluginType=LegacyEditor
>>> [DEBUG] - class='fiji.patches.OldAppConfiguration', priority=0.0, enabled=true, pluginType=LegacyAppConfiguration
>>> [DEBUG] - class='net.imglib2.meta.units.DefaultUnitService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTObjectWidget', priority=0.0, enabled=true, pluginType=InputWidget
>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTToggleWidget', priority=0.0, enabled=true, pluginType=InputWidget
>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTChoiceWidget', priority=0.0, enabled=true, pluginType=InputWidget
>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTNumberWidget', priority=0.0, enabled=true, pluginType=InputWidget
>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTTextWidget', priority=0.0, enabled=true, pluginType=InputWidget
>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTFileWidget', priority=0.0, enabled=true, pluginType=InputWidget
>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTButtonWidget', priority=0.0, enabled=true, pluginType=InputWidget
>>> [DEBUG] - class='net.imagej.plugins.uploaders.ssh.SSHFileUploader', priority=0.0, enabled=true, pluginType=Uploader
>>> [DEBUG] - class='net.imagej.plugins.uploaders.ssh.SFTPFileUploader', priority=0.0, enabled=true, pluginType=Uploader
>>> [DEBUG] - class='net.imagej.plugins.uploaders.webdav.WebDAVUploader', priority=0.0, enabled=true, pluginType=Uploader
>>> [DEBUG] - class='org.scijava.plugins.text.markdown.MarkdownTextFormat', priority=0.0, enabled=true, pluginType=TextFormat
>>> [DEBUG] - class='net.imagej.ui.awt.AWTRenderingService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.ui.awt.AWTScreenCaptureService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.object.DefaultObjectService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.convert.DefaultConverter', priority=0.0, enabled=true, pluginType=Converter
>>> [DEBUG] - class='org.scijava.convert.DefaultConvertService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.input.DefaultInputService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.ui.DefaultUIService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.ui.dnd.DefaultDragAndDropService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.ui.dnd.ListDragAndDropHandler', priority=0.0, enabled=true, pluginType=DragAndDropHandler
>>> [DEBUG] - class='org.scijava.ui.dnd.ScriptFileDragAndDropHandler', priority=0.0, enabled=true, pluginType=DragAndDropHandler
>>> [DEBUG] - class='org.scijava.ui.console.UIArgument', priority=0.0, enabled=true, pluginType=ConsoleArgument
>>> [DEBUG] - class='org.scijava.plugin.DefaultPluginService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.text.DefaultTextService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.display.DefaultDisplayService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.prefs.DefaultPrefService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.io.DefaultRecentFileService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.io.console.OpenArgument', priority=0.0, enabled=true, pluginType=ConsoleArgument
>>> [DEBUG] - class='org.scijava.io.DefaultIOService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.widget.DefaultWidgetService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.menu.DefaultMenuService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.tool.DefaultToolService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.app.DefaultAppService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.app.DefaultStatusService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.module.DefaultModuleService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.welcome.DefaultWelcomeService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.thread.DefaultThreadService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.script.io.ScriptIOPlugin', priority=0.0, enabled=true, pluginType=IOPlugin
>>> [DEBUG] - class='org.scijava.script.DefaultScriptHeaderService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.event.DefaultEventHistory', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.platform.DefaultPlatformService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.options.DefaultOptionsService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.command.DefaultCommandService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.command.console.RunArgument', priority=0.0, enabled=true, pluginType=ConsoleArgument
>>> [DEBUG] - class='org.scijava.console.DefaultConsoleService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.SciJava', priority=0.0, enabled=true, pluginType=Gateway
>>> [DEBUG] - class='net.imagej.operator.DefaultCalculatorService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.autoscale.DefaultAutoscaleService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.sampler.DefaultSamplerService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.lut.io.LUTIOPlugin', priority=0.0, enabled=true, pluginType=IOPlugin
>>> [DEBUG] - class='net.imagej.display.DefaultDatasetView', priority=0.0, enabled=true, pluginType=DataView
>>> [DEBUG] - class='net.imagej.display.DefaultImageDisplay', priority=0.0, enabled=true, pluginType=Display
>>> [DEBUG] - class='net.imagej.display.DefaultZoomService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.display.DefaultOverlayService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.display.DefaultImageDisplayService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.display.DefaultOverlayView', priority=0.0, enabled=true, pluginType=DataView
>>> [DEBUG] - class='net.imagej.display.DefaultWindowService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.types.DataType32BitSignedFloat', priority=0.0, enabled=true, pluginType=DataType
>>> [DEBUG] - class='net.imagej.types.DataType12BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType
>>> [DEBUG] - class='net.imagej.types.DataType64BitSignedFloat', priority=0.0, enabled=true, pluginType=DataType
>>> [DEBUG] - class='net.imagej.types.DataType8BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType
>>> [DEBUG] - class='net.imagej.types.DataType32BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType
>>> [DEBUG] - class='net.imagej.types.DataType32BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType
>>> [DEBUG] - class='net.imagej.types.DataType64BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType
>>> [DEBUG] - class='net.imagej.types.DataType16BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType
>>> [DEBUG] - class='net.imagej.types.DataType16BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType
>>> [DEBUG] - class='net.imagej.types.DataType1BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType
>>> [DEBUG] - class='net.imagej.types.DataType8BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType
>>> [DEBUG] - class='net.imagej.types.DefaultDataTypeService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.DefaultImgPlusService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.minmax.DefaultMinMaxMethod', priority=0.0, enabled=true, pluginType=MinMaxMethod
>>> [DEBUG] - class='net.imagej.ui.DefaultImageJUIService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.ui.dnd.LUTFileDragAndDropHandler', priority=0.0, enabled=true, pluginType=DragAndDropHandler
>>> [DEBUG] - class='net.imagej.measure.DefaultStatisticsService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.measure.DefaultMeasurementService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.threshold.DefaultThresholdService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.animation.DefaultAnimationService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.table.DefaultTableDisplay', priority=0.0, enabled=true, pluginType=Display
>>> [DEBUG] - class='net.imagej.DefaultDatasetService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='io.scif.io.URLHandle', priority=0.0, enabled=true, pluginType=IStreamAccess
>>> [DEBUG] - class='io.scif.codec.LZWCodec', priority=0.0, enabled=true, pluginType=Codec
>>> [DEBUG] - class='io.scif.io.DefaultNIOService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='io.scif.img.converters.DefaultPlaneConverterService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='io.scif.img.cell.SCIFIOCellCacheCleaningProvider', priority=0.0, enabled=true, pluginType=RefProvider
>>> [DEBUG] - class='io.scif.codec.JPEG2000Codec', priority=0.0, enabled=true, pluginType=Codec
>>> [DEBUG] - class='io.scif.img.DefaultImgUtilityService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='io.scif.gui.DefaultGUIService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='io.scif.filters.DimensionSwapper', priority=0.0, enabled=true, pluginType=Filter
>>> [DEBUG] - class='io.scif.xml.DefaultXMLService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='io.scif.codec.HuffmanCodec', priority=0.0, enabled=true, pluginType=Codec
>>> [DEBUG] - class='io.scif.refs.DefaultRefManagerService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='io.scif.services.DefaultFormatService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='io.scif.codec.RPZACodec', priority=0.0, enabled=true, pluginType=Codec
>>> [DEBUG] - class='io.scif.codec.MJPBCodec', priority=0.0, enabled=true, pluginType=Codec
>>> [DEBUG] - class='io.scif.codec.PassthroughCodec', priority=0.0, enabled=true, pluginType=Codec
>>> [DEBUG] - class='io.scif.filters.PlaneSeparatorMetadata', priority=0.0, enabled=true, pluginType=MetadataWrapper
>>> [DEBUG] - class='io.scif.filters.ChannelFiller', priority=0.0, enabled=true, pluginType=Filter
>>> [DEBUG] - class='io.scif.codec.PackbitsCodec', priority=0.0, enabled=true, pluginType=Codec
>>> [DEBUG] - class='io.scif.filters.MinMaxFilter', priority=0.0, enabled=true, pluginType=Filter
>>> [DEBUG] - class='io.scif.io.BZip2Handle', priority=0.0, enabled=true, pluginType=IStreamAccess
>>> [DEBUG] - class='io.scif.services.DefaultTranslatorService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='io.scif.img.cell.RefMapCleaningProvider', priority=0.0, enabled=true, pluginType=RefProvider
>>> [DEBUG] - class='io.scif.codec.QTRLECodec', priority=0.0, enabled=true, pluginType=Codec
>>> [DEBUG] - class='io.scif.io.GZipHandle', priority=0.0, enabled=true, pluginType=IStreamAccess
>>> [DEBUG] - class='io.scif.codec.LosslessJPEGCodec', priority=0.0, enabled=true, pluginType=Codec
>>> [DEBUG] - class='io.scif.codec.MSVideoCodec', priority=0.0, enabled=true, pluginType=Codec
>>> [DEBUG] - class='io.scif.filters.PlaneSeparator', priority=0.0, enabled=true, pluginType=Filter
>>> [DEBUG] - class='io.scif.codec.Base64Codec', priority=0.0, enabled=true, pluginType=Codec
>>> [DEBUG] - class='io.scif.SCIFIO', priority=0.0, enabled=true, pluginType=Gateway
>>> [DEBUG] - class='io.scif.codec.DefaultCodecService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='io.scif.codec.JPEGCodec', priority=0.0, enabled=true, pluginType=Codec
>>> [DEBUG] - class='io.scif.img.ImgPlusCtxCleaningProvider', priority=0.0, enabled=true, pluginType=RefProvider
>>> [DEBUG] - class='io.scif.codec.LuraWaveCodec', priority=0.0, enabled=true, pluginType=Codec
>>> [DEBUG] - class='io.scif.img.cell.SCIFIOCellCleaningProvider', priority=0.0, enabled=true, pluginType=RefProvider
>>> [DEBUG] - class='io.scif.codec.MSRLECodec', priority=0.0, enabled=true, pluginType=Codec
>>> [DEBUG] - class='io.scif.img.cell.cache.MapDBCache', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='io.scif.DefaultMetadataService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='io.scif.img.cell.SCIFIOCellImgCleaningProvider', priority=0.0, enabled=true, pluginType=RefProvider
>>> [DEBUG] - class='io.scif.filters.FileStitcher', priority=0.0, enabled=true, pluginType=Filter
>>> [DEBUG] - class='io.scif.services.DefaultFilePatternService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='io.scif.io.ZipHandle', priority=0.0, enabled=true, pluginType=IStreamAccess
>>> [DEBUG] - class='io.scif.codec.NikonCodec', priority=0.0, enabled=true, pluginType=Codec
>>> [DEBUG] - class='io.scif.formats.tiff.DefaultTiffService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='io.scif.services.DefaultLocationService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='io.scif.codec.ZlibCodec', priority=0.0, enabled=true, pluginType=Codec
>>> [DEBUG] - class='io.scif.services.JAIIIOServiceImpl', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='io.scif.formats.qt.DefaultQTJavaService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Batch', priority=0.0, enabled=true, pluginType=ConsoleArgument
>>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$IJPath', priority=0.0, enabled=true, pluginType=ConsoleArgument
>>> [DEBUG] - class='net.imagej.legacy.plugin.LegacyAutoImporter', priority=0.0, enabled=true, pluginType=AutoImporter
>>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Macro', priority=0.0, enabled=true, pluginType=ConsoleArgument
>>> [DEBUG] - class='net.imagej.legacy.LegacyJavaRunner', priority=0.0, enabled=true, pluginType=JavaRunner
>>> [DEBUG] - class='net.imagej.legacy.display.DefaultImagePlusDisplayViewer', priority=0.0, enabled=true, pluginType=DisplayViewer
>>> [DEBUG] - class='net.imagej.legacy.display.DefaultImagePlusDisplay', priority=0.0, enabled=true, pluginType=Display
>>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Run', priority=0.0, enabled=true, pluginType=ConsoleArgument
>>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Filename', priority=0.0, enabled=true, pluginType=ConsoleArgument
>>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Debug', priority=0.0, enabled=true, pluginType=ConsoleArgument
>>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Eval', priority=0.0, enabled=true, pluginType=ConsoleArgument
>>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Port', priority=0.0, enabled=true, pluginType=ConsoleArgument
>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingDateWidget', priority=0.0, enabled=true, pluginType=InputWidget
>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingFileWidget', priority=0.0, enabled=true, pluginType=InputWidget
>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingChoiceWidget', priority=0.0, enabled=true, pluginType=InputWidget
>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingNumberWidget', priority=0.0, enabled=true, pluginType=InputWidget
>>> [DEBUG] - class='org.scijava.ui.swing.SwingIconService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.ui.swing.viewer.text.SwingTextDisplayViewer', priority=0.0, enabled=true, pluginType=DisplayViewer
>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingObjectWidget', priority=0.0, enabled=true, pluginType=InputWidget
>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingToggleWidget', priority=0.0, enabled=true, pluginType=InputWidget
>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingTextWidget', priority=0.0, enabled=true, pluginType=InputWidget
>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingColorWidget', priority=0.0, enabled=true, pluginType=InputWidget
>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingButtonWidget', priority=0.0, enabled=true, pluginType=InputWidget
>>> [DEBUG] - class='org.scijava.plugins.scripting.java.CommandJavaRunner', priority=0.0, enabled=true, pluginType=JavaRunner
>>> [DEBUG] - class='org.scijava.plugins.scripting.java.DefaultJavaService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.ui.swing.sdi.viewer.SwingSdiImageDisplayViewer', priority=0.0, enabled=true, pluginType=DisplayViewer
>>> [DEBUG] - class='net.imagej.ui.swing.viewer.table.SwingTableDisplayViewer', priority=0.0, enabled=true, pluginType=DisplayViewer
>>> [DEBUG] - class='net.imagej.ui.swing.overlay.JHotDrawService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.ui.swing.mdi.viewer.SwingMdiImageDisplayViewer', priority=0.0, enabled=true, pluginType=DisplayViewer
>>> [DEBUG] - class='net.imagej.ui.swing.widget.SwingColorTableWidget', priority=0.0, enabled=true, pluginType=InputWidget
>>> [DEBUG] - class='net.imagej.ui.swing.widget.SwingDimSelectionWidget', priority=0.0, enabled=true, pluginType=InputWidget
>>> [DEBUG] - class='net.imagej.ui.swing.widget.SwingHistogramWidget', priority=0.0, enabled=true, pluginType=InputWidget
>>> [DEBUG] - class='net.imagej.updater.FileUploader', priority=0.0, enabled=true, pluginType=Uploader
>>> [DEBUG] - class='net.imagej.updater.DefaultUpdateService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.updater.DefaultUploaderService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.ImageJ', priority=0.0, enabled=true, pluginType=Gateway
>>> [DEBUG] - class='net.imagej.ops.DefaultOpService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.ops.threshold.LocalMean', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.DefaultOpMatchingService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.plugins.commands.dataset.LoadDataset', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.overlay.SelectedManagerOverlayProperties', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.misc.ApplyLookupTable', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.plugins.scripting.jruby.JRubyScriptHeader', priority=0.0, enabled=true, pluginType=ScriptHeader
>>> [DEBUG] - class='fiji.plugin.trackmate.action.TrackBranchAnalysis$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackLocationAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer
>>> [DEBUG] - class='fiji.plugin.trackmate.visualization.hyperstack.HyperStackDisplayerFactory', priority=0.0, enabled=true, pluginType=ViewFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.features.edges.EdgeTimeLocationAnalyzer', priority=0.0, enabled=true, pluginType=EdgeAnalyzer
>>> [DEBUG] - class='fiji.plugin.trackmate.action.ResetRadiusAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.action.RecalculateFeatureAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.action.ISBIChallengeExporter$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.action.MergeFileAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotRadiusEstimatorFactory', priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackBranchingAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer
>>> [DEBUG] - class='fiji.plugin.trackmate.action.PlotNSpotsVsTimeAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.action.ExportStatsToIJAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.features.edges.EdgeTargetAnalyzer', priority=0.0, enabled=true, pluginType=EdgeAnalyzer
>>> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackDurationAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer
>>> [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotIntensityAnalyzerFactory', priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.features.edges.EdgeVelocityAnalyzer', priority=0.0, enabled=true, pluginType=EdgeAnalyzer
>>> [DEBUG] - class='fiji.plugin.trackmate.detection.LogDetectorFactory', priority=0.0, enabled=true, pluginType=SpotDetectorFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.action.ExportTracksToXML$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.action.LinkNew3DViewerAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.SimpleLAPTrackerFactory', priority=0.0, enabled=true, pluginType=SpotTrackerFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.action.ResetSpotTimeFeatureAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.action.RadiusToEstimatedAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.action.IcyTrackExporter$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.action.CaptureOverlayAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.tracking.sparselap.SimpleSparseLAPTrackerFactory', priority=0.0, enabled=true, pluginType=SpotTrackerFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotMorphologyAnalyzerFactory', priority=0.0, enabled=false, pluginType=SpotAnalyzerFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackSpotQualityFeatureAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer
>>> [DEBUG] - class='fiji.plugin.trackmate.action.CopyOverlayAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.tracking.sparselap.SparseLAPTrackerFactory', priority=0.0, enabled=true, pluginType=SpotTrackerFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.detection.ManualDetectorFactory', priority=0.0, enabled=true, pluginType=SpotDetectorFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.features.manual.ManualSpotColorAnalyzerFactory', priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.detection.DogDetectorFactory', priority=0.0, enabled=true, pluginType=SpotDetectorFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.action.ExtractTrackStackAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.LAPTrackerFactory', priority=0.0, enabled=true, pluginType=SpotTrackerFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.features.manual.ManualEdgeColorAnalyzer', priority=0.0, enabled=true, pluginType=EdgeAnalyzer
>>> [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotContrastAnalyzerFactory', priority=0.0, enabled=false, pluginType=SpotAnalyzerFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackSpeedStatisticsAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer
>>> [DEBUG] - class='fiji.plugin.trackmate.detection.DownsampleLogDetectorFactory', priority=0.0, enabled=true, pluginType=SpotDetectorFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.visualization.trackscheme.TrackSchemeFactory', priority=0.0, enabled=true, pluginType=ViewFactory
>>> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackIndexAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer
>>> [DEBUG] - class='io.scif.cli.commands.Help', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand
>>> [DEBUG] - class='io.scif.cli.commands.Show', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand
>>> [DEBUG] - class='io.scif.cli.commands.Info', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand
>>> [DEBUG] - class='io.scif.cli.commands.Convert', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand
>>> [DEBUG] - class='io.scif.ome.commands.OMEXMLToolCommand', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand
>>> [DEBUG] - class='io.scif.ome.translators.DefaultOMETranslator', priority=0.0, enabled=true, pluginType=ToOMETranslator
>>> [DEBUG] - class='io.scif.ome.services.DefaultOMEXMLService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='io.scif.ome.services.DefaultOMEMetadataService', priority=0.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat', priority=0.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat$OMETranslator', priority=0.0, enabled=true, pluginType=Translator
>>> [DEBUG] - class='io.scif.tools.commands.Show', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand
>>> [DEBUG] - class='io.scif.tools.commands.Help', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand
>>> [DEBUG] - class='io.scif.tools.commands.Info', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand
>>> [DEBUG] - class='io.scif.tools.commands.Convert', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand
>>> [DEBUG] - class='io.scif.lifesci.SDTFormat', priority=0.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='net.imagej.options.OptionsPointTool', menu='Edit > Options > Point Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>> [DEBUG] - class='net.imagej.plugins.commands.debug.PointSetDemo', menu='Plugins > Sandbox > PointSet Demo', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.PowerDataValues', menu='Process > Math > Power...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.app.Preferences', label='Preferences', menu='File > Preferences', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.options.OptionsProfilePlot', menu='Edit > Options > Profile Plot Options...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>> [DEBUG] - class='net.imagej.ops.commands.project.ProjectCommand', menu='Image > Threshold > Project', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.options.OptionsProxy', menu='Edit > Options > Proxy Settings...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>> [DEBUG] - class='net.imagej.app.QuitProgram', label='Quit', menu='File > Quit', iconPath='/icons/commands/door_in.png', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.RadialNeighborhoodSpecifier', label='Radial Neighborhood Specification', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.ReciprocalDataValues', menu='Process > Math > Reciprocal...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.RectangularNeighborhoodSpecifier', label='Rectangular Neighborhood Specification', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.display.RemoveOverlay', menu='Image > Overlay > Remove Overlay', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.display.RemoveOverlayReferences', menu='Image > Overlay > Remove Overlay References', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.ReorderAxis', menu='Image > Axes > Reorder Axis', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.ReorderData', menu='Image > Data > Reorder Data...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.options.OptionsReset', menu='Edit > Options > Reset', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.ResizeImage', menu='Image > Adjust > Resize...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.ResliceImage', menu='Image > Stacks > Reslice...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.io.RevertImage', menu='File > Revert', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.rotate.Rotate90DegreesLeft', menu='Image > Transform > Rotate 90 Degrees Left', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.rotate.Rotate90DegreesRight', menu='Image > Transform > Rotate 90 Degrees Right', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.RotateImageXY', menu='Image > Transform > Rotate...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.options.OptionsRoundedRectangleTool', menu='Edit > Options > Rounded Rect Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>> [DEBUG] - class='org.scijava.plugins.commands.script.RunScript', menu='Plugins > Run Script...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.SaltAndPepper', menu='Process > Noise > Salt and Pepper', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.io.SaveImage', menu='File > Save', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.io.SaveAsImage', menu='File > Save As...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.ui.swing.script.ScriptEditor', menu='File > New > Script...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.display.SelectOverlays', menu='Edit > Selection > Select Overlays', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.display.SelectView', menu='Edit > Selection > Select View', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.display.SelectWindow', label='Select Window...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.legacy.plugin.GetPath', label='Select path', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.axispos.SetActiveAxis', menu='Image > Axes > Set Active Axis...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.axispos.SetAxisPosition', menu='Image > Axes > Set Axis Position...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomSet', label='Set Zoom...', menu='Image > Zoom > Set...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.SetDataValues', menu='Process > Math > Set...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsDemo', menu='Process > Shadows > Shadows Demo', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.correlate.SharpenDataValues', menu='Process > Sharpen', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.misc.ShowInfo', menu='Image > Show Info...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.display.ShowLUT', menu='Image > Color > Show LUT', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.display.ShowLUTAsTable', menu='Image > Color > Show LUT As Table', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.correlate.SmoothDataValues', menu='Process > Smooth', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsSouth', menu='Process > Shadows > South', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsSoutheast', menu='Process > Shadows > Southeast', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsSouthwest', menu='Process > Shadows > Southwest', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.overlay.SelectionSpecify', menu='Edit > Selection > Specify...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.display.SpectralComposite', menu='Image > Color > Spectral Composite...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.SplitChannelsContext', menu='Split Channels', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.tools.SprayCanToolConfig', label='Spray Can Tool', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.SquareRootDataValues', menu='Process > Math > Square Root...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.SquareDataValues', menu='Process > Math > Square...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.animation.StartAnimation', menu='Image > Animation > Start Animation', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.debug.StatisticsDemo', menu='Plugins > Sandbox > Statistics Demo', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.animation.StopAllAnimations', menu='Image > Animation > Stop All Animations', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.animation.StopAnimation', menu='Image > Animation > Stop Animation', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='org.scijava.plugins.commands.debug.ShowSubscribers', menu='Plugins > Debug > Subscribers', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.SubtractFromDataValues', menu='Process > Math > Subtract...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.legacy.plugin.SwitchToLegacyMode', menu='Help > Switch to Legacy Mode', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.display.interactive.SynchronizeWindows', menu='Analyze > Tools > Synchronize Windows', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='org.scijava.plugins.commands.debug.SystemInformation', menu='Plugins > Debug > System Information', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.debug.TableDemo', menu='Plugins > Sandbox > Table Demo', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='org.scijava.plugins.commands.debug.TextDisplayTest', menu='Plugins > Sandbox > TextDisplayTest', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.updater.PromptUserToUpdate', label='There are updates available', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.display.interactive.Threshold', menu='Image > Adjust > Threshold...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='org.scijava.ui.swing.mdi.WindowsTileVertical', menu='Window > Tile Vertical', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomToSelection', menu='Image > Zoom > To Selection', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.TranslateImage', menu='Image > Transform > Translate...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionTrimmedMean', menu='Process > Noise > Noise Reduction > Trimmed Mean', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.updater.CheckForUpdates', label='Up-to-date check', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.ui.swing.updater.ImageJUpdater', menu='Help > Update...', priority=0.0, enabled=true, pluginType=UpdaterUI
>>> [DEBUG] - class='net.imagej.plugins.commands.upload.SampleImageUploader', menu='Help > Upload Sample Image', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.zoom.Zoom100Percent', menu='Image > Zoom > View 100%', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.options.OptionsWandTool', menu='Edit > Options > Wand Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>> [DEBUG] - class='org.scijava.ui.swing.commands.WatchEvents', menu='Plugins > Debug > Watch Events', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsWest', menu='Process > Shadows > West', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.assign.XorDataValuesWith', menu='Process > Math > XOR...', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomIn', label='Zoom In', menu='Image > Zoom > In', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomOut', label='Zoom Out', menu='Image > Zoom > Out', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='net.imagej.ui.swing.script.TextEditor$BeanshellHighlighter', label='beanshell', priority=0.0, enabled=true, pluginType=SyntaxHighlighter
>>> [DEBUG] - class='net.imagej.ui.swing.script.TextEditor$ECMAScriptHighlighter', label='ecmascript', priority=0.0, enabled=true, pluginType=SyntaxHighlighter
>>> [DEBUG] - class='net.imagej.ui.swing.script.TextEditor$IJ1MacroHighlighter', label='ij1-macro', priority=0.0, enabled=true, pluginType=SyntaxHighlighter
>>> [DEBUG] - class='net.imagej.ui.swing.script.TextEditor$MatlabHighlighter', label='matlab', priority=0.0, enabled=true, pluginType=SyntaxHighlighter
>>> [DEBUG] - class='net.imagej.plugins.commands.app.EasterEgg', label='| It's a secret to everyone |', priority=0.0, enabled=true, pluginType=Command
>>> [DEBUG] - class='io.scif.formats.APNGFormat', name='Animated PNG', priority=0.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='io.scif.img.converters.ArrayDataAccessConverter', name='ArrayDataAccess', priority=0.0, enabled=true, pluginType=PlaneConverter
>>> [DEBUG] - class='io.scif.formats.AVIFormat', name='Audio Video Interleave', priority=0.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='net.imagej.plugins.tools.AxisPositionHandler', name='Axis Position Shortcuts', priority=0.0, enabled=true, pluginType=Tool
>>> [DEBUG] - class='org.scijava.plugins.scripting.beanshell.BeanshellScriptLanguage', name='BeanShell', priority=0.0, enabled=true, pluginType=ScriptLanguage
>>> [DEBUG] - class='org.scijava.plugins.scripting.clojure.ClojureScriptLanguage', name='Clojure', priority=0.0, enabled=true, pluginType=ScriptLanguage
>>> [DEBUG] - class='net.imagej.autoscale.ConfidenceIntervalAutoscaleMethod', name='Confidence Interval', priority=0.0, enabled=true, pluginType=AutoscaleMethod
>>> [DEBUG] - class='net.imagej.plugins.tools.ContextMenuHandler', name='Context Menus', priority=0.0, enabled=true, pluginType=Tool
>>> [DEBUG] - class='io.scif.formats.DICOMFormat', name='DICOM', priority=0.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='net.imagej.autoscale.DefaultAutoscaleMethod', name='Default', priority=0.0, enabled=true, pluginType=AutoscaleMethod
>>> [DEBUG] - class='net.imagej.threshold.DefaultThresholdMethod', name='Default', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>> [DEBUG] - class='io.scif.img.converters.RandomAccessConverter', name='Default', priority=0.0, enabled=true, pluginType=PlaneConverter
>>> [DEBUG] - class='io.scif.formats.EPSFormat', name='Encapsulated PostScript', priority=0.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='io.scif.formats.FITSFormat', name='Flexible Image Transport System', priority=0.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='io.scif.formats.GIFFormat', name='Graphics Interchange Format', priority=0.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='org.scijava.plugins.scripting.groovy.GroovyScriptLanguage', name='Groovy', priority=0.0, enabled=true, pluginType=ScriptLanguage
>>> [DEBUG] - class='net.imagej.threshold.HuangThresholdMethod', name='Huang', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>> [DEBUG] - class='net.imagej.legacy.plugin.IJ1MacroLanguage', name='IJ1 Macro', priority=0.0, enabled=true, pluginType=ScriptLanguage
>>> [DEBUG] - class='io.scif.formats.ICSFormat', name='Image Cytometry Standard', priority=0.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='net.imagej.legacy.LegacyImageJApp', name='ImageJ1', priority=0.0, enabled=true, pluginType=App
>>> [DEBUG] - class='net.imagej.threshold.IntermodesThresholdMethod', name='Intermodes', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>> [DEBUG] - class='net.imagej.threshold.IsoDataThresholdMethod', name='IsoData', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>> [DEBUG] - class='io.scif.formats.JPEGFormat', name='JPEG', priority=0.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='io.scif.formats.JPEG2000Format', name='JPEG-2000', priority=0.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='org.scijava.plugins.scripting.java.JavaScriptLanguage', name='Java', priority=0.0, enabled=true, pluginType=ScriptLanguage
>>> [DEBUG] - class='io.scif.formats.JavaFormat', name='Java source code', priority=0.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='org.scijava.plugins.scripting.javascript.JavaScriptScriptLanguage', name='JavaScript', priority=0.0, enabled=true, pluginType=ScriptLanguage
>>> [DEBUG] - class='net.imagej.threshold.LiThresholdMethod', name='Li', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>> [DEBUG] - class='org.scijava.plugins.platforms.macosx.MacOSXPlatform', name='Mac OS X', priority=0.0, enabled=true, pluginType=Platform
>>> [DEBUG] - class='net.imagej.threshold.MaxEntropyThresholdMethod', name='MaxEntropy', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>> [DEBUG] - class='net.imagej.threshold.MaxLikelihoodThresholdMethod', name='MaxLikelihood', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>> [DEBUG] - class='net.imagej.threshold.MeanThresholdMethod', name='Mean', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>> [DEBUG] - class='io.scif.formats.MicromanagerFormat', name='Micro-Manager', priority=0.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='net.imagej.threshold.MinErrorThresholdMethod', name='MinError(I)', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>> [DEBUG] - class='net.imagej.threshold.MinimumThresholdMethod', name='Minimum', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>> [DEBUG] - class='net.imagej.threshold.MomentsThresholdMethod', name='Moments', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>> [DEBUG] - class='io.scif.formats.MNGFormat', name='Multiple Network Graphics', priority=0.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='io.scif.formats.NRRDFormat', name='NRRD', priority=0.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='io.scif.formats.OBFFormat', name='OBF', priority=0.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='net.imagej.threshold.OtsuThresholdMethod', name='Otsu', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>> [DEBUG] - class='io.scif.formats.PCXFormat', name='PCX', priority=0.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='io.scif.formats.qt.PICTFormat', name='PICT', priority=0.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='net.imagej.plugins.tools.PanActivator', name='Pan Activator', priority=0.0, enabled=true, pluginType=Tool
>>> [DEBUG] - class='net.imagej.threshold.PercentileThresholdMethod', name='Percentile', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>> [DEBUG] - class='io.scif.img.converters.PlanarAccessConverter', name='PlanarAccess', priority=0.0, enabled=true, pluginType=PlaneConverter
>>> [DEBUG] - class='io.scif.formats.PGMFormat', name='Portable Gray Map', priority=0.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='net.imagej.plugins.tools.PixelProbe', name='Probe', priority=0.0, enabled=true, pluginType=Tool
>>> [DEBUG] - class='org.scijava.plugins.scripting.jython.JythonScriptLanguage', name='Python', priority=0.0, enabled=true, pluginType=ScriptLanguage
>>> [DEBUG] - class='io.scif.formats.qt.NativeQTFormat', name='QuickTime', priority=0.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='net.imagej.threshold.RenyiEntropyThresholdMethod', name='RenyiEntropy', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>> [DEBUG] - class='org.scijava.plugins.scripting.jruby.JRubyScriptLanguage', name='Ruby', priority=0.0, enabled=true, pluginType=ScriptLanguage
>>> [DEBUG] - class='io.scif.app.SCIFIOApp', name='SCIFIO', priority=0.0, enabled=true, pluginType=App
>>> [DEBUG] - class='net.imagej.threshold.ShanbhagThresholdMethod', name='Shanbhag', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>> [DEBUG] - class='io.scif.formats.FakeFormat', name='Simulated data', priority=0.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='io.scif.formats.TextFormat', name='Text', priority=0.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='net.imagej.threshold.TriangleThresholdMethod', name='Triangle', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>> [DEBUG] - class='net.imagej.plugins.tools.FocusHandler', name='Window Focus', priority=0.0, enabled=true, pluginType=Tool
>>> [DEBUG] - class='org.scijava.plugins.platforms.windows.WindowsPlatform', name='Windows', priority=0.0, enabled=true, pluginType=Platform
>>> [DEBUG] - class='io.scif.formats.BMPFormat', name='Windows Bitmap', priority=0.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='net.imagej.threshold.YenThresholdMethod', name='Yen', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>> [DEBUG] - class='io.scif.formats.ZipFormat', name='Zip', priority=0.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='net.imagej.plugins.tools.ZoomHandler', name='Zoom Shortcuts', priority=0.0, enabled=true, pluginType=Tool
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealAbs', name='abs', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToImageInPlace', name='add', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddRandomAccessibleIntervalToIterableInterval', name='add', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToPlanarDoubleImage', name='add', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealAddConstant', name='addconstant', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealAddNoise', name='addnoise', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealAndConstant', name='andconstant', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccos', name='arccos', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccosh', name='arccosh', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccot', name='arccot', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccoth', name='arccoth', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccsc', name='arccsc', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccsch', name='arccsch', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArcsec', name='arcsec', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArcsech', name='arcsech', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArcsin', name='arcsin', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArcsinh', name='arcsinh', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArctan', name='arctan', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArctanh', name='arctanh', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.ascii.DefaultASCII', name='ascii', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCeil', name='ceil', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.chunker.DefaultChunker', name='chunker', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealConstant', name='constant', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.convert.ConvertPixClip', name='convert', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.convert.ConvertII', name='convert', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.convert.ConvertPixNormalizeScale', name='convert', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.convert.ConvertPixScale', name='convert', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.convert.ConvertPixCopy', name='convert', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.convolve.ConvolveNaive', name='convolve', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.convolve.ConvolveFourier', name='convolve', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCopy', name='copy', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCos', name='cos', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCosh', name='cosh', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCot', name='cot', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCoth', name='coth', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.create.CreateArrayImg', name='create', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCsc', name='csc', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCsch', name='csch', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCubeRoot', name='cuberoot', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealDivideConstant', name='divideconstant', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.equation.DefaultEquation', name='equation', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealExp', name='exp', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealExpMinusOne', name='expminusone', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealFloor', name='floor', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealGammaConstant', name='gammaconstant', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.gauss.GaussRAI2RAI', name='gauss', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealGaussianRandom', name='gaussianrandom', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.identity.DefaultIdentity', name='identity', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealInvert', name='invert', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinInplaceAndInplace', name='join', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinInplaceAndFunction', name='join', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinFunctionAndFunction', name='join', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinInplaceFunctions', name='join', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinFunctionAndInplace', name='join', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinFunctions', name='join', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealLog', name='log', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealLog10', name='log10', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealLog2', name='log2', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealLogOnePlusX', name='logoneplusx', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.lookup.DefaultLookup', name='lookup', aliases='op', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.loop.DefaultLoopInplace', name='loop', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.loop.DefaultLoopFunction', name='loop', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.threshold.Manual', name='manualthreshold', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.map.MapRA2View', name='map', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.map.MapRAI2View', name='map', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.map.MapII2View', name='map', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealMaxConstant', name='maxconstant', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealMinConstant', name='minconstant', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.misc.MinMaxRealType', name='minmax', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.statistics.moments.Moment2AboutMean', name='moment1aboutmean', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.statistics.moments.Moment1AboutMean', name='moment1aboutmean', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealMultiplyConstant', name='multiplyconstant', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealNearestInt', name='nearestint', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealNegate', name='negate', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.normalize.NormalizeRealType', name='normalize', aliases='norm', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.normalize.NormalizeII', name='normalize', aliases='norm', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealOrConstant', name='orconstant', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.threshold.Otsu', name='otsu', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealPowerConstant', name='powerconstant', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealReciprocal', name='reciprocal', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealRound', name='round', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.scale.ScaleImg', name='scale', aliases='norm', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSec', name='sec', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSech', name='sech', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSignum', name='signum', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSin', name='sin', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSinc', name='sinc', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSincPi', name='sincpi', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSinh', name='sinh', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSqr', name='sqr', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSqrt', name='sqrt', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealStep', name='step', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSubtractConstant', name='subtractconstant', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='org.scijava.ui.swing.sdi.SwingSDIUI', name='swing', priority=0.0, enabled=true, pluginType=UserInterface
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealTan', name='tan', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealTanh', name='tanh', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.threshold.PixThreshold', name='threshold', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.threshold.GlobalThreshold', name='threshold', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.threshold.LocalThreshold', name='threshold', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealUlp', name='ulp', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealUniformRandom', name='uniformrandom', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealXorConstant', name='xorconstant', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealZero', name='zero', priority=0.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='fiji.plugin.trackmate.tracking.ManualTrackerFactory', priority=-1.0, enabled=true, pluginType=SpotTrackerFactory
>>> [DEBUG] - class='net.imagej.ops.map.ParallelMap', name='map', priority=-95.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.map.ParallelMapI2I', name='map', priority=-97.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.map.ParallelMapI2R', name='map', priority=-98.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.crop.CropImgPlus', name='crop', aliases='slice', priority=-99.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.crop.CropLabeling', name='crop', aliases='slice', priority=-99.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.map.MapII2II', name='map', priority=-99.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.project.parallel.DefaultProjectP', name='project', priority=-99.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.statistics.StdDevRealTypeDirect', name='stddev', priority=-99.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.statistics.VarianceRealTypeDirect', name='variance', priority=-99.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='org.scijava.ui.dnd.FileDragAndDropHandler', priority=-100.0, enabled=true, pluginType=DragAndDropHandler
>>> [DEBUG] - class='org.scijava.display.DefaultTextDisplay', priority=-100.0, enabled=true, pluginType=Display
>>> [DEBUG] - class='org.scijava.log.StderrLogService', priority=-100.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='org.scijava.platform.DefaultAppEventService', priority=-100.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.display.DummyScreenCaptureService', priority=-100.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.render.DummyRenderingService', priority=-100.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='net.imagej.io.DatasetIOPlugin', priority=-100.0, enabled=true, pluginType=IOPlugin
>>> [DEBUG] - class='io.scif.formats.APNGFormat$APNGTranslator', priority=-100.0, enabled=true, pluginType=Translator
>>> [DEBUG] - class='io.scif.formats.qt.NativeQTFormat$NativeQTTranslator', priority=-100.0, enabled=true, pluginType=Translator
>>> [DEBUG] - class='io.scif.formats.FakeFormat$FakeTranslator', priority=-100.0, enabled=true, pluginType=Translator
>>> [DEBUG] - class='io.scif.formats.MicromanagerFormat$MicromanagerTranslator', priority=-100.0, enabled=true, pluginType=Translator
>>> [DEBUG] - class='io.scif.services.DefaultInitializeService', priority=-100.0, enabled=true, pluginType=Service
>>> [DEBUG] - class='io.scif.formats.AVIFormat$Translator', priority=-100.0, enabled=true, pluginType=Translator
>>> [DEBUG] - class='io.scif.formats.ICSFormat$ICSTranslator', priority=-100.0, enabled=true, pluginType=Translator
>>> [DEBUG] - class='io.scif.formats.EPSFormat$EPSTranslator', priority=-100.0, enabled=true, pluginType=Translator
>>> [DEBUG] - class='io.scif.formats.ImageIOFormat$ImageIOTranslator', priority=-100.0, enabled=true, pluginType=Translator
>>> [DEBUG] - class='io.scif.formats.qt.LegacyQTFormat$LegacyQTTranslator', priority=-100.0, enabled=true, pluginType=Translator
>>> [DEBUG] - class='net.imagej.legacy.plugin.DefaultLegacyOpener', priority=-100.0, enabled=true, pluginType=LegacyOpener
>>> [DEBUG] - class='net.imagej.legacy.plugin.DefaultLegacyEditor', priority=-100.0, enabled=true, pluginType=LegacyEditor
>>> [DEBUG] - class='org.scijava.plugins.scripting.java.MainJavaRunner', priority=-100.0, enabled=true, pluginType=JavaRunner
>>> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat$OMEXMLTranslator', priority=-100.0, enabled=true, pluginType=Translator
>>> [DEBUG] - class='io.scif.formats.qt.LegacyQTFormat', name='QuickTime', priority=-100.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='org.scijava.app.SciJavaApp', name='SciJava', priority=-100.0, enabled=true, pluginType=App
>>> [DEBUG] - class='io.scif.formats.JPEGTileFormat', name='Tile JPEG', priority=-100.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToNumericType', name='add', priority=-100.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='org.scijava.ui.awt.AWTUI', name='awt', priority=-100.0, enabled=true, pluginType=UserInterface
>>> [DEBUG] - class='net.imagej.ops.crop.CropRAI', name='crop', aliases='slice', priority=-100.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.map.MapII2RAI', name='map', priority=-100.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.map.MapRAI2III', name='map', priority=-100.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.map.MapI', name='map', priority=-100.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.neighborhood.MapNeighborhood', name='map', priority=-100.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.statistics.MaxRealType', name='max', priority=-100.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.statistics.MeanRealType', name='mean', priority=-100.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.statistics.MedianRealType', name='median', priority=-100.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.statistics.MinRealType', name='min', priority=-100.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.project.ProjectRAI2II', name='project', priority=-100.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.misc.SizeIterableInterval', name='size', priority=-100.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.statistics.StdDevRealType', name='stddev', priority=-100.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.statistics.SumRealType', name='sum', priority=-100.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='org.scijava.ui.swing.mdi.SwingMdiUI', name='swing-mdi', priority=-100.0, enabled=true, pluginType=UserInterface
>>> [DEBUG] - class='net.imagej.ops.statistics.VarianceRealType', name='variance', priority=-100.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='org.scijava.text.io.TextIOPlugin', priority=-101.0, enabled=true, pluginType=IOPlugin
>>> [DEBUG] - class='net.imagej.ops.map.MapI2I', name='map', priority=-101.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.plugins.tools.WandTool', name='Wand', description='Wand (tracing) tool', iconPath='/icons/tools/wand.png', priority=-110.0, enabled=false, pluginType=Tool
>>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingTextTool', name='Text', description='Text tool', iconPath='/icons/tools/text.png', priority=-115.0, enabled=false, pluginType=Tool
>>> [DEBUG] - class='net.imagej.plugins.tools.ZoomTool', name='Zoom', description='Magnifying glass (or use "+" and "-" keys)', iconPath='/icons/tools/zoom.png', priority=-200.0, enabled=true, pluginType=Tool
>>> [DEBUG] - class='net.imagej.plugins.tools.PanTool', name='Pan', description='Scrolling tool (or press space bar and drag)', iconPath='/icons/tools/pan.png', priority=-201.0, enabled=true, pluginType=Tool
>>> [DEBUG] - class='net.imagej.plugins.tools.PaintBrushTool', name='Paintbrush', description='Paintbrush Tool', iconPath='/icons/tools/paintbrush.png', priority=-300.0, enabled=true, pluginType=Tool
>>> [DEBUG] - class='net.imagej.plugins.tools.PencilTool', name='Pencil', description='Pencil Tool', iconPath='/icons/tools/pencil.png', priority=-301.0, enabled=true, pluginType=Tool
>>> [DEBUG] - class='net.imagej.plugins.tools.SprayCanTool', name='SprayCan', label='Spray Can', description='Spray Can Tool', iconPath='/icons/tools/spray-can.png', priority=-303.0, enabled=true, pluginType=Tool
>>> [DEBUG] - class='net.imagej.plugins.tools.FloodFillTool', name='FloodFill', label='Flood Fill', description='Flood Fill Tool', iconPath='/icons/tools/flood-fill.png', priority=-304.0, enabled=true, pluginType=Tool
>>> [DEBUG] - class='net.imagej.plugins.tools.ArrowTool', name='Arrow', description='Arrow Tool', iconPath='/icons/tools/arrow.png', priority=-305.0, enabled=false, pluginType=Tool
>>> [DEBUG] - class='net.imagej.plugins.tools.FgColorTool', name='Foreground', iconPath='/icons/tools/blank.png', priority=-500.0, enabled=true, pluginType=Tool
>>> [DEBUG] - class='net.imagej.plugins.tools.BgColorTool', name='Background', iconPath='/icons/tools/blankBlack.png', priority=-501.0, enabled=true, pluginType=Tool
>>> [DEBUG] - class='io.scif.ome.formats.OMETIFFFormat', priority=-9998.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='io.scif.ome.formats.OMETIFFFormat$OMETIFFTranslator', priority=-9998.0, enabled=true, pluginType=Translator
>>> [DEBUG] - class='org.scijava.module.process.LoadInputsPreprocessor', priority=-9999.0, enabled=true, pluginType=PreprocessorPlugin
>>> [DEBUG] - class='io.scif.formats.TIFFFormat$TIFFTranslator', priority=-9999.0, enabled=true, pluginType=Translator
>>> [DEBUG] - class='io.scif.formats.TIFFFormat', name='Tagged Image File Format', priority=-9999.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='org.scijava.ui.FilePreprocessor', priority=-9999.5, enabled=true, pluginType=PreprocessorPlugin
>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin
>>> [DEBUG] - class='org.scijava.plugins.text.plain.PlainTextFormat', priority=-10000.0, enabled=true, pluginType=TextFormat
>>> [DEBUG] - class='org.scijava.display.DisplayPostprocessor', priority=-10000.0, enabled=true, pluginType=PostprocessorPlugin
>>> [DEBUG] - class='io.scif.DefaultTranslator', priority=-10000.0, enabled=true, pluginType=Translator
>>> [DEBUG] - class='net.imagej.legacy.ui.LegacyInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin
>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin
>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingMdiInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin
>>> [DEBUG] - class='net.imagej.ui.swing.overlay.DefaultJHotDrawAdapter', priority=-10000.0, enabled=true, pluginType=JHotDrawAdapter
>>> [DEBUG] - class='org.scijava.platform.DefaultPlatform', name='Default', priority=-10000.0, enabled=true, pluginType=Platform
>>> [DEBUG] - class='net.imagej.plugins.tools.AcceleratorHandler', name='Keyboard Shortcuts', priority=-10000.0, enabled=true, pluginType=Tool
>>> [DEBUG] - class='io.scif.formats.MinimalTIFFFormat', name='Minimal TIFF', priority=-10000.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToImageFunctional', name='add', priority=-10000.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='net.imagej.ops.chunker.InterleavedChunker', name='chunker', priority=-10000.0, enabled=true, pluginType=Op
>>> [DEBUG] - class='org.scijava.module.process.CheckInputsPreprocessor', priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin
>>> [DEBUG] - class='org.scijava.module.process.SaveInputsPreprocessor', priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin
>>> [DEBUG] - class='io.scif.formats.TIFFJAIFormat', name='Tagged Image File Format', priority=-10001.0, enabled=true, pluginType=Format
>>> [DEBUG] - class='net.imagej.ops.misc.SizeIterable', name='size', priority=-Infinity, enabled=true, pluginType=Op
>>> [DEBUG] Created service 'org.scijava.plugin.DefaultPluginService' in 51 ms
>>> [DEBUG] Creating service: org.scijava.object.DefaultObjectService
>>> log4j:WARN No appenders could be found for logger (org.bushe.swing.event.EventService).
>>> log4j:WARN Please initialize the log4j system properly.
>>> log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info.
>>> [DEBUG] Created service 'org.scijava.object.DefaultObjectService' in 72 ms
>>> [DEBUG] Creating service: org.scijava.module.DefaultModuleService
>>> [DEBUG] Creating service: org.scijava.prefs.DefaultPrefService
>>> [DEBUG] Created service 'org.scijava.prefs.DefaultPrefService' in 4 ms
>>> [DEBUG] Creating service: org.scijava.convert.DefaultConvertService
>>> [DEBUG] Created service 'org.scijava.convert.DefaultConvertService' in 4 ms
>>> [DEBUG] Created service 'org.scijava.module.DefaultModuleService' in 14 ms
>>> [DEBUG] Creating service: org.scijava.command.DefaultCommandService
>>> [DEBUG] Created service 'org.scijava.command.DefaultCommandService' in 36 ms
>>> [DEBUG] Created service 'org.scijava.script.DefaultScriptService' in 184 ms
>>> [DEBUG] Creating service: net.imagej.lut.DefaultLUTService
>>> [DEBUG] Creating service: net.imagej.DefaultDatasetService
>>> [DEBUG] Creating service: io.scif.services.DefaultFormatService
>>> [DEBUG] Created service 'io.scif.services.DefaultFormatService' in 3 ms
>>> [DEBUG] Creating service: net.imagej.types.DefaultDataTypeService
>>> [INFO] Found 11 DataType plugins.
>>> [DEBUG] Created service 'net.imagej.types.DefaultDataTypeService' in 40 ms
>>> [DEBUG] Created service 'net.imagej.DefaultDatasetService' in 61 ms
>>> [DEBUG] Creating service: org.scijava.display.DefaultDisplayService
>>> [DEBUG] Created service 'org.scijava.display.DefaultDisplayService' in 5 ms
>>> [DEBUG] Creating service: net.imagej.display.DefaultImageDisplayService
>>> [DEBUG] Created service 'net.imagej.display.DefaultImageDisplayService' in 3 ms
>>> [DEBUG] Created service 'net.imagej.lut.DefaultLUTService' in 74 ms
>>> [DEBUG] Creating service: net.imagej.legacy.DefaultLegacyService
>>> [DEBUG] Creating service: net.imagej.display.DefaultOverlayService
>>> [DEBUG] Creating service: org.scijava.options.DefaultOptionsService
>>> [DEBUG] Created service 'org.scijava.options.DefaultOptionsService' in 2 ms
>>> [DEBUG] Creating service: net.imagej.ui.awt.AWTRenderingService
>>> [DEBUG] Created service 'net.imagej.ui.awt.AWTRenderingService' in 1 ms
>>> [DEBUG] Created service 'net.imagej.display.DefaultOverlayService' in 10 ms
>>> [DEBUG] Creating service: net.imagej.threshold.DefaultThresholdService
>>> [DEBUG] Created service 'net.imagej.threshold.DefaultThresholdService' in 4 ms
>>> [DEBUG] Creating service: org.scijava.menu.DefaultMenuService
>>> [DEBUG] Created service 'org.scijava.menu.DefaultMenuService' in 3 ms
>>> [DEBUG] Creating service: org.scijava.app.DefaultStatusService
>>> [DEBUG] Creating service: org.scijava.app.DefaultAppService
>>> [DEBUG] Created service 'org.scijava.app.DefaultAppService' in 4 ms
>>> [DEBUG] Created service 'org.scijava.app.DefaultStatusService' in 5 ms
>>> [INFO] Found 8 ScriptLanguage plugins.
>>> [INFO] Found 0 scripts
>>> [INFO] Overriding Upload Sample Image; identifier: command:net.imagej.plugins.commands.upload.SampleImageUploader; jar: file:/opt/Fiji.app/jars/imagej-plugins-commands-0.2.6.jar
>>> [INFO] Overriding Test FlowCam; identifier: script:/opt/Fiji.app/plugins/FlowCam/Test_FlowCam.ijm; jar: file:/opt/Fiji.app/jars/scijava-common-2.33.0.jar
>>> [DEBUG] Created service 'net.imagej.legacy.DefaultLegacyService' in 685 ms
>>> [DEBUG] Creating service: fiji.DefaultFijiService
>>> [DEBUG] Created service 'fiji.DefaultFijiService' in 1 ms
>>> [DEBUG] Creating service: net.imglib2.meta.units.DefaultUnitService
>>> [DEBUG] Created service 'net.imglib2.meta.units.DefaultUnitService' in 44 ms
>>> [DEBUG] Creating service: net.imagej.ui.awt.AWTScreenCaptureService
>>> [DEBUG] Created service 'net.imagej.ui.awt.AWTScreenCaptureService' in 2 ms
>>> [DEBUG] Creating service: org.scijava.input.DefaultInputService
>>> [DEBUG] Created service 'org.scijava.input.DefaultInputService' in 6 ms
>>> [DEBUG] Creating service: org.scijava.ui.DefaultUIService
>>> [DEBUG] Creating service: org.scijava.platform.DefaultPlatformService
>>> [DEBUG] Creating service: org.scijava.platform.DefaultAppEventService
>>> [DEBUG] Created service 'org.scijava.platform.DefaultAppEventService' in 2 ms
>>> [INFO] Found 1 Platform plugins.
>>> [DEBUG] Configuring platform: org.scijava.platform.DefaultPlatform
>>> [DEBUG] Created service 'org.scijava.platform.DefaultPlatformService' in 11 ms
>>> [DEBUG] Creating service: org.scijava.tool.DefaultToolService
>>> [DEBUG] Created service 'org.scijava.tool.DefaultToolService' in 5 ms
>>> [DEBUG] Created service 'org.scijava.ui.DefaultUIService' in 23 ms
>>> [DEBUG] Creating service: org.scijava.ui.dnd.DefaultDragAndDropService
>>> [DEBUG] Created service 'org.scijava.ui.dnd.DefaultDragAndDropService' in 5 ms
>>> [DEBUG] Creating service: org.scijava.text.DefaultTextService
>>> [DEBUG] Created service 'org.scijava.text.DefaultTextService' in 3 ms
>>> [DEBUG] Creating service: org.scijava.io.DefaultRecentFileService
>>> [DEBUG] Created service 'org.scijava.io.DefaultRecentFileService' in 61 ms
>>> [DEBUG] Creating service: org.scijava.io.DefaultIOService
>>> [DEBUG] Created service 'org.scijava.io.DefaultIOService' in 4 ms
>>> [DEBUG] Creating service: org.scijava.widget.DefaultWidgetService
>>> [INFO] Found 22 InputWidget plugins.
>>> [DEBUG] Created service 'org.scijava.widget.DefaultWidgetService' in 6 ms
>>> [DEBUG] Creating service: org.scijava.welcome.DefaultWelcomeService
>>> [DEBUG] Created service 'org.scijava.welcome.DefaultWelcomeService' in 2 ms
>>> [DEBUG] Creating service: org.scijava.script.DefaultScriptHeaderService
>>> [DEBUG] Created service 'org.scijava.script.DefaultScriptHeaderService' in 2 ms
>>> [DEBUG] Creating service: org.scijava.event.DefaultEventHistory
>>> [DEBUG] Created service 'org.scijava.event.DefaultEventHistory' in 2 ms
>>> [DEBUG] Creating service: org.scijava.console.DefaultConsoleService
>>> [DEBUG] Created service 'org.scijava.console.DefaultConsoleService' in 2 ms
>>> [DEBUG] Creating service: net.imagej.operator.DefaultCalculatorService
>>> [DEBUG] Created service 'net.imagej.operator.DefaultCalculatorService' in 2 ms
>>> [DEBUG] Creating service: net.imagej.autoscale.DefaultAutoscaleService
>>> [DEBUG] Created service 'net.imagej.autoscale.DefaultAutoscaleService' in 3 ms
>>> [DEBUG] Creating service: net.imagej.sampler.DefaultSamplerService
>>> [DEBUG] Created service 'net.imagej.sampler.DefaultSamplerService' in 3 ms
>>> [DEBUG] Creating service: net.imagej.display.DefaultZoomService
>>> [DEBUG] Created service 'net.imagej.display.DefaultZoomService' in 2 ms
>>> [DEBUG] Creating service: net.imagej.display.DefaultWindowService
>>> [DEBUG] Created service 'net.imagej.display.DefaultWindowService' in 2 ms
>>> [DEBUG] Creating service: net.imagej.DefaultImgPlusService
>>> [DEBUG] Created service 'net.imagej.DefaultImgPlusService' in 1 ms
>>> [DEBUG] Creating service: net.imagej.ui.DefaultImageJUIService
>>> [DEBUG] Created service 'net.imagej.ui.DefaultImageJUIService' in 1 ms
>>> [DEBUG] Creating service: net.imagej.measure.DefaultStatisticsService
>>> [DEBUG] Created service 'net.imagej.measure.DefaultStatisticsService' in 3 ms
>>> [DEBUG] Creating service: net.imagej.measure.DefaultMeasurementService
>>> [DEBUG] Created service 'net.imagej.measure.DefaultMeasurementService' in 1 ms
>>> [DEBUG] Creating service: net.imagej.animation.DefaultAnimationService
>>> [DEBUG] Created service 'net.imagej.animation.DefaultAnimationService' in 4 ms
>>> [DEBUG] Creating service: io.scif.io.DefaultNIOService
>>> [DEBUG] Created service 'io.scif.io.DefaultNIOService' in 2 ms
>>> [DEBUG] Creating service: io.scif.img.converters.DefaultPlaneConverterService
>>> [DEBUG] Created service 'io.scif.img.converters.DefaultPlaneConverterService' in 6 ms
>>> [DEBUG] Creating service: io.scif.img.DefaultImgUtilityService
>>> [DEBUG] Created service 'io.scif.img.DefaultImgUtilityService' in 5 ms
>>> [DEBUG] Creating service: io.scif.gui.DefaultGUIService
>>> [DEBUG] Created service 'io.scif.gui.DefaultGUIService' in 3 ms
>>> [DEBUG] Creating service: io.scif.xml.DefaultXMLService
>>> [DEBUG] Created service 'io.scif.xml.DefaultXMLService' in 22 ms
>>> [DEBUG] Creating service: io.scif.refs.DefaultRefManagerService
>>> [DEBUG] Created service 'io.scif.refs.DefaultRefManagerService' in 1 ms
>>> [DEBUG] Creating service: io.scif.services.DefaultTranslatorService
>>> [DEBUG] Created service 'io.scif.services.DefaultTranslatorService' in 2 ms
>>> [DEBUG] Creating service: io.scif.codec.DefaultCodecService
>>> [DEBUG] Created service 'io.scif.codec.DefaultCodecService' in 1 ms
>>> [DEBUG] Creating service: io.scif.img.cell.cache.MapDBCache
>>> [DEBUG] Created service 'io.scif.img.cell.cache.MapDBCache' in 8 ms
>>> [DEBUG] Creating service: io.scif.DefaultMetadataService
>>> [DEBUG] Created service 'io.scif.DefaultMetadataService' in 0 ms
>>> [DEBUG] Creating service: io.scif.services.DefaultFilePatternService
>>> [DEBUG] Created service 'io.scif.services.DefaultFilePatternService' in 2 ms
>>> [DEBUG] Creating service: io.scif.formats.tiff.DefaultTiffService
>>> [DEBUG] Created service 'io.scif.formats.tiff.DefaultTiffService' in 3 ms
>>> [DEBUG] Creating service: io.scif.services.DefaultLocationService
>>> [DEBUG] Created service 'io.scif.services.DefaultLocationService' in 1 ms
>>> [DEBUG] Creating service: io.scif.services.JAIIIOServiceImpl
>>> [DEBUG] Created service 'io.scif.services.JAIIIOServiceImpl' in 24 ms
>>> [DEBUG] Creating service: io.scif.formats.qt.DefaultQTJavaService
>>> [DEBUG] Created service 'io.scif.formats.qt.DefaultQTJavaService' in 5 ms
>>> [DEBUG] Creating service: org.scijava.ui.swing.SwingIconService
>>> [DEBUG] Created service 'org.scijava.ui.swing.SwingIconService' in 3 ms
>>> [DEBUG] Creating service: org.scijava.plugins.scripting.java.DefaultJavaService
>>> [DEBUG] Created service 'org.scijava.plugins.scripting.java.DefaultJavaService' in 2 ms
>>> [DEBUG] Creating service: net.imagej.ui.swing.overlay.JHotDrawService
>>> [DEBUG] Created service 'net.imagej.ui.swing.overlay.JHotDrawService' in 3 ms
>>> [DEBUG] Creating service: net.imagej.updater.DefaultUpdateService
>>> [DEBUG] Created service 'net.imagej.updater.DefaultUpdateService' in 7 ms
>>> [DEBUG] Creating service: net.imagej.updater.DefaultUploaderService
>>> [DEBUG] Created service 'net.imagej.updater.DefaultUploaderService' in 1 ms
>>> [DEBUG] Creating service: net.imagej.ops.DefaultOpService
>>> [DEBUG] Creating service: net.imagej.ops.DefaultOpMatchingService
>>> [DEBUG] Created service 'net.imagej.ops.DefaultOpMatchingService' in 2 ms
>>> [DEBUG] Created service 'net.imagej.ops.DefaultOpService' in 5 ms
>>> [DEBUG] Creating service: net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor
>>> [DEBUG] Created service 'net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor' in 1 ms
>>> [DEBUG] Creating service: io.scif.ome.services.DefaultOMEXMLService
>>> [DEBUG] Created service 'io.scif.ome.services.DefaultOMEXMLService' in 30 ms
>>> [DEBUG] Creating service: io.scif.ome.services.DefaultOMEMetadataService
>>> [DEBUG] Created service 'io.scif.ome.services.DefaultOMEMetadataService' in 11 ms
>>> [DEBUG] Creating service: net.imagej.display.DummyScreenCaptureService
>>> [DEBUG] Created service 'net.imagej.display.DummyScreenCaptureService' in 0 ms
>>> [DEBUG] Creating service: net.imagej.render.DummyRenderingService
>>> [DEBUG] Created service 'net.imagej.render.DummyRenderingService' in 1 ms
>>> [DEBUG] Creating service: io.scif.services.DefaultInitializeService
>>> [DEBUG] Created service 'io.scif.services.DefaultInitializeService' in 3 ms
>>> [DEBUG] Received command line arguments:
>>> [DEBUG] publish(
>>> context = org.scijava.Context@7c92eb86
>>> consumed = false,null,null), called from non-EDT Thread:null
>>> [DEBUG] -port7
>>> [DEBUG] -macro
>>> [DEBUG] /home/btupper/hello.ijm
>>> [DEBUG] -batch
>>> [INFO] Found 11 ConsoleArgument plugins.
>>> [ERROR] Skipping unsupported option -port7
>>> [DEBUG] publish(
>>> context = org.scijava.Context@7c92eb86
>>> consumed = false,null,null), called from non-EDT Thread:null
>>> [INFO] Discovered user interface: net.imagej.legacy.ui.LegacyUI
>>> [INFO] Discovered user interface: org.scijava.ui.swing.sdi.SwingSDIUI
>>> [INFO] Discovered user interface: org.scijava.ui.awt.AWTUI
>>> [INFO] Discovered user interface: org.scijava.ui.swing.mdi.SwingMdiUI
>>> [btupper@fcm-flow ~]$
>>
>> --
>> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

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ImageJ mailing list: http://imagej.nih.gov/ij/list.html
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Re: Warning/Error using Fiji on linux

Mark Hiner
Hi Ben,

Some additional information on these messages:

>log4j:WARN No appenders could be found for logger
(org.bushe.swing.event.EventService).

These log4j warnings come up because, although there is a log4j.jar, there
is no log4j.properties shipped with Fiji by default right now. We have
decided to fix that by creating a new SciJava-config component
<https://github.com/scijava/scijava-config> to bundle configuration files
e.g. for log4j - so eventually these warnings will go away. To my
knowledge, the warnings just indicate that you won't see log statements
emitted by the EventService class in particular.

>[ERROR] Skipping unsupported option -port7

There is an issue open <https://github.com/imagej/imagej/issues/98>
tracking this error. It should only be an actual problem if you will rely
on the SingleInstanceListener functionality, restricting Fiji to one
instance open at a time - otherwise I don't think it will affect you. If it
does become a problem though, adding your feedback to that issue would be
very helpful!

Best,
Mark

On Tue, Dec 16, 2014 at 9:05 PM, Ben Tupper <[hidden email]> wrote:

> On Dec 16, 2014, at 9:43 PM, Ben Tupper <[hidden email]> wrote:
>
> >
> > On Dec 16, 2014, at 7:19 PM, Rasband, Wayne (NIH/NIMH) [E] <
> [hidden email]> wrote:
> >
> >> On Dec 16, 2014, at 3:11 PM, Ben Tupper <[hidden email]> wrote:
> >>>
> >>> Hello,
> >>>
> >>> I'm learning to use Fiji in a headless CentOS 6 environment.  I first
> updated fiji using...
> >>>
> >>> $ fiji --update update
> >>>
> >>>
> >>> I have a simple macro, '~/hello.ijm', adapted from this one...
> http://rsb.info.nih.gov/ij/macros/SaveTextFileDemo.txt
> >>>
> >>> //
> >>> //START ~/hello.ijm
> >>> //
> >>> f = File.open("/home/btupper/hello.txt");
> >>> // use d2s() function (double to string) to specify decimal places
> >>> for (i=0; i<=2*PI; i+=0.01)
> >>>  print(f, d2s(i,6) + "  \t" + d2s(sin(i),6) + " \t" + d2s(cos(i),6));
> >>> //
> >>> //FINISH ~/hello.ijm
> >>> //
> >>>
> >>> I then run the macro from the command line. The macro successfully
> creates and populates the '~/hello.txt' file.  However, I get log4j
> warnings and an error as shown below.  (Note, I have pasted in below the
> entire output when I set the --debug flag.)
> >>
> >> You should report this bug using Fiji’s Help>Report a Bug command. The
> bug report will automatically provide more information about your setup and
> it will help the Fiji developers keep track of your bug report so that it
> is not forgotten. http://imagej.net/Bugs
> >>
>
>
> It appears that this is identical to an existing bug report:
> http://fiji.sc/bugzilla/show_bug.cgi?id=961
>
> I have been away from ImageJ for so long - I am astounded by the changes
> and still a bit lost.
>
> Cheers,
> Ben
>
>
>
>
>
> >> -wayne
> >>
> >>> [btupper@fcm-flow ~]$ fiji --headless -macro /home/btupper/hello.ijm
> >>> log4j:WARN No appenders could be found for logger
> (org.bushe.swing.event.EventService).
> >>> log4j:WARN Please initialize the log4j system properly.
> >>> log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig
> for more info.
> >>> [ERROR] Skipping unsupported option -port7
> >>>
> >>> Here is a bit more info about the Fiji installation.
> >>>
> >>> [btupper@fcm-flow ~]$ fiji --print-java-home
> >>> /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24/
> >>> [btupper@fcm-flow ~]$ fiji --print-ij-dir
> >>> /opt/Fiji.app
> >>>
> >>>
> >>> Do I need to worry about the warnings?  I can't locate any
> instructions for initializing log4j on the Fiji website.  I have found
> these 3rd party instructions [
> http://www.javabeat.net/baisc-steps-to-configure-log4j-using-xml-and-properties-file/
> ] but I have no idea if the are appropriate for what Fiji requires.
> >>>
> >>> I also have no idea how to resolve the error.
> >>>
> >
> > Ah - will do.  I assumed that it was something in my own setup - I just
> noticed that log4j is distributed with Fiji in the Fiji/jars subdirectory.
> >
> >
> >>> Any suggestions?
> >>>
> >>> Thanks!
> >>> Ben
> >>>
> >>>
> >>> P.S. Below is the command and output with --debug set
> >>>
> >>> [btupper@fcm-flow ~]$ fiji --debug --headless -macro
> /home/btupper/hello.ijm
> >>> Available RAM: 3727MB, using 3/4 of that: 2796MB
> >>> JRE not found in '/opt/Fiji.app/jre'
> >>> JAVA_HOME contains a JRE:
> '/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre'
> >>> Re-executing with correct library lookup path
> (/opt/Fiji.app/lib/linux64:/opt/Fiji.app/mm/linux64)
> >>> Available RAM: 3727MB, using 3/4 of that: 2796MB
> >>> JRE not found in '/opt/Fiji.app/jre'
> >>> JAVA_HOME contains a JRE:
> '/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre'
> >>> Appending missing -batch flag for headless operation.
> >>> java -Dpython.cachedir.skip=true -Dplugins.dir=/opt/Fiji.app -Xmx2796m
> -Djava.awt.headless=true -Dapple.awt.UIElement=true -Xincgc
> -XX:PermSize=128m -Dsun.java.command=ImageJ
> -Djava.class.path=/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar
> -Dimagej.dir=/opt/Fiji.app -Dij.dir=/opt/Fiji.app -Dfiji.dir=/opt/Fiji.app
> -Dfiji.defaultLibPath=lib/amd64/server/libjvm.so
> -Dfiji.executable=/opt/Fiji.app/fiji-linux64
> -Dij.executable=/opt/Fiji.app/fiji-linux64
> -Djava.library.path=/opt/Fiji.app/lib/linux64:/opt/Fiji.app/mm/linux64
> -Dij.debug=true -Dscijava.log.level=debug net.imagej.launcher.ClassLauncher
> -classpath /opt/Fiji.app/jars/ij-1.49m.jar fiji.Main -port7 -macro
> /home/btupper/hello.ijm -batch
> >>> Using JAVA_HOME /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre
> >>> Opening Java library
> /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre/lib/amd64/server/libjvm.so
> >>> Adding option: -Djava.home=/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24/
> >>> Launching main class fiji.Main with parameters [-port7, -macro,
> /home/btupper/hello.ijm, -batch]
> >>> Class loader = sun.misc.Launcher$AppClassLoader@b92d342
> >>> ij1.plugin.dirs: null
> >>> $HOME/.plugins: /home/btupper/.plugins does not exist
> >>> Launching main class net.imagej.Main with parameters [-port7, -macro,
> /home/btupper/hello.ijm, -batch]
> >>> Class loader = sun.misc.Launcher$AppClassLoader@b92d342
> >>> Checking class loader: sun.misc.Launcher$AppClassLoader@b92d342
> >>> Checking URL: file:/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar
> >>> Not Eclipse because first entry is:
> file:/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar
> >>> [DEBUG] Creating service: org.scijava.event.DefaultEventService
> >>> [DEBUG] Creating service: org.scijava.log.StderrLogService
> >>> [DEBUG] Created service 'org.scijava.log.StderrLogService' in 2 ms
> >>> [DEBUG] Creating service: org.scijava.thread.DefaultThreadService
> >>> [DEBUG] Created service 'org.scijava.thread.DefaultThreadService' in 1
> ms
> >>> [DEBUG] Created service 'org.scijava.event.DefaultEventService' in 47
> ms
> >>> [DEBUG] Creating service: org.scijava.script.DefaultScriptService
> >>> [DEBUG] Creating service: org.scijava.plugin.DefaultPluginService
> >>> [INFO] Found 777 plugins.
> >>> [DEBUG] - class='org.scijava.module.process.DebugPreprocessor',
> priority=Infinity, enabled=true, pluginType=PreprocessorPlugin
> >>> [DEBUG] - class='org.scijava.module.process.DebugPostprocessor',
> priority=Infinity, enabled=true, pluginType=PostprocessorPlugin
> >>> [DEBUG] - class='net.imagej.plugins.tools.KonamiHandler',
> name='Konami', priority=Infinity, enabled=true, pluginType=Tool
> >>> [DEBUG] - class='org.scijava.event.DefaultEventService',
> priority=100000.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.module.process.ValidityPreprocessor',
> priority=10001.0, enabled=true, pluginType=PreprocessorPlugin
> >>> [DEBUG] - class='org.scijava.ui.UIPreprocessor', priority=10000.0,
> enabled=true, pluginType=PreprocessorPlugin
> >>> [DEBUG] - class='org.scijava.display.ActiveDisplayPreprocessor',
> priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
> >>> [DEBUG] - class='org.scijava.module.process.GatewayPreprocessor',
> priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
> >>> [DEBUG] - class='org.scijava.module.process.ServicePreprocessor',
> priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
> >>> [DEBUG] - class='net.imagej.display.ActiveImagePreprocessor',
> priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
> >>> [DEBUG] -
> class='net.imagej.legacy.plugin.ActiveImagePlusPreprocessor',
> priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
> >>> [DEBUG] - class='io.scif.bf.BioFormatsFormat', name='Bio-Formats
> Compatibility Format', priority=10000.0, enabled=true, pluginType=Format
> >>> [DEBUG] - class='net.imagej.ops.slicer.SlicewiseRAI2RAI',
> name='slicemapper', priority=10000.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.arithmetic.add.parallel.AddConstantToArrayDoubleImageP',
> name='add', priority=111.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.arithmetic.add.parallel.AddConstantToArrayByteImageP',
> name='add', priority=110.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='io.scif.ome.translators.OMETIFFTranslator$OMEtoOMETIFFTranslator',
> priority=101.0, enabled=true, pluginType=ToOMETranslator
> >>> [DEBUG] -
> class='io.scif.ome.translators.OMETIFFTranslator$OMETIFFtoOMETranslator',
> priority=101.0, enabled=true, pluginType=FromOMETranslator
> >>> [DEBUG] -
> class='io.scif.bf.ome.BioFormatsTranslator$BioFormatsOMETranslator',
> priority=101.0, enabled=true, pluginType=ToOMETranslator
> >>> [DEBUG] - class='net.imagej.app.ToplevelImageJApp', name='ImageJ',
> priority=101.0, enabled=true, pluginType=App
> >>> [DEBUG] -
> class='net.imagej.ops.arithmetic.add.AddConstantToArrayDoubleImage',
> name='add', priority=101.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTMessageWidget',
> priority=100.0, enabled=true, pluginType=InputWidget
> >>> [DEBUG] - class='org.scijava.module.process.InitPreprocessor',
> priority=100.0, enabled=true, pluginType=PreprocessorPlugin
> >>> [DEBUG] - class='org.scijava.script.DefaultScriptService',
> priority=100.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.lut.DefaultLUTService', priority=100.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.legacy.display.LegacyImageDisplayViewer',
> priority=100.0, enabled=true, pluginType=DisplayViewer
> >>> [DEBUG] - class='net.imagej.legacy.display.LegacyTextDisplayViewer',
> priority=100.0, enabled=true, pluginType=DisplayViewer
> >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingMessageWidget',
> priority=100.0, enabled=true, pluginType=InputWidget
> >>> [DEBUG] -
> class='net.imagej.ui.swing.overlay.RectangleJHotDrawAdapter',
> priority=100.0, enabled=true, pluginType=JHotDrawAdapter
> >>> [DEBUG] -
> class='net.imagej.ui.swing.overlay.ThresholdJHotDrawAdapter',
> priority=100.0, enabled=true, pluginType=JHotDrawAdapter
> >>> [DEBUG] -
> class='io.scif.ome.translators.BMPTranslator$BMPOMETranslator',
> priority=100.0, enabled=true, pluginType=ToOMETranslator
> >>> [DEBUG] -
> class='io.scif.ome.translators.MicromanagerTranslator$MicromanagerOMETranslator',
> priority=100.0, enabled=true, pluginType=FromOMETranslator
> >>> [DEBUG] -
> class='io.scif.ome.translators.OBFTranslator$OBFOMETranslator',
> priority=100.0, enabled=true, pluginType=ToOMETranslator
> >>> [DEBUG] -
> class='io.scif.ome.translators.TIFFTranslator$TIFFOMETranslator',
> priority=100.0, enabled=true, pluginType=ToOMETranslator
> >>> [DEBUG] -
> class='io.scif.ome.translators.TIFFTranslator$OMETIFFTranslator',
> priority=100.0, enabled=true, pluginType=FromOMETranslator
> >>> [DEBUG] -
> class='io.scif.ome.translators.APNGTranslator$OMEAPNGTranslator',
> priority=100.0, enabled=true, pluginType=FromOMETranslator
> >>> [DEBUG] -
> class='io.scif.ome.translators.APNGTranslator$APNGOMETranslator',
> priority=100.0, enabled=true, pluginType=ToOMETranslator
> >>> [DEBUG] -
> class='io.scif.ome.translators.ICSTranslator$OMEICSTranslator',
> priority=100.0, enabled=true, pluginType=FromOMETranslator
> >>> [DEBUG] -
> class='io.scif.ome.translators.ICSTranslator$ICSOMETranslator',
> priority=100.0, enabled=true, pluginType=ToOMETranslator
> >>> [DEBUG] -
> class='io.scif.ome.translators.DICOMTranslator$DICOMOMETranslator',
> priority=100.0, enabled=true, pluginType=ToOMETranslator
> >>> [DEBUG] -
> class='io.scif.ome.translators.NRRDTranslator$NRRDOMETranslator',
> priority=100.0, enabled=true, pluginType=ToOMETranslator
> >>> [DEBUG] -
> class='io.scif.ome.translators.EPSTranslator$OMEEPSTranslator',
> priority=100.0, enabled=true, pluginType=FromOMETranslator
> >>> [DEBUG] - class='net.imagej.operator.OpAdd', name='Add',
> priority=100.0, enabled=true, pluginType=CalculatorOp
> >>> [DEBUG] - class='net.imagej.app.ImageJApp', name='ImageJ',
> priority=100.0, enabled=true, pluginType=App
> >>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingRectangleTool',
> name='Rectangle', description='Rectangular overlays',
> iconPath='/icons/tools/rectangle.png', priority=100.0, enabled=true,
> pluginType=Tool
> >>> [DEBUG] -
> class='net.imagej.ops.arithmetic.add.AddConstantToArrayByteImage',
> name='add', priority=100.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$AddOp',
> name='add', priority=100.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$DivideOp',
> name='divide', priority=100.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.legacy.ui.LegacyUI', name='legacy',
> priority=100.0, enabled=true, pluginType=UserInterface
> >>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$MultiplyOp',
> name='multiply', priority=100.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$SubtractOp',
> name='subtract', priority=100.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ui.swing.overlay.EllipseJHotDrawAdapter',
> priority=99.0, enabled=true, pluginType=JHotDrawAdapter
> >>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingEllipseTool',
> name='Oval', description='Oval selections',
> iconPath='/icons/tools/oval.png', priority=99.0, enabled=true,
> pluginType=Tool
> >>> [DEBUG] - class='net.imagej.operator.OpSubtract', name='Subtract',
> priority=99.0, enabled=true, pluginType=CalculatorOp
> >>> [DEBUG] -
> class='net.imagej.ui.swing.overlay.GeneralPathJHotDrawAdapter',
> priority=98.5, enabled=true, pluginType=JHotDrawAdapter
> >>> [DEBUG] - class='net.imagej.ui.swing.overlay.PolygonJHotDrawAdapter',
> priority=98.0, enabled=true, pluginType=JHotDrawAdapter
> >>> [DEBUG] - class='net.imagej.operator.OpMultiply', name='Multiply',
> priority=98.0, enabled=true, pluginType=CalculatorOp
> >>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPolygonTool',
> name='Polygon', description='Polygon overlays',
> iconPath='/icons/tools/polygon.png', priority=98.0, enabled=true,
> pluginType=Tool
> >>> [DEBUG] - class='net.imagej.ui.swing.overlay.LineJHotDrawAdapter',
> priority=97.0, enabled=true, pluginType=JHotDrawAdapter
> >>> [DEBUG] - class='net.imagej.operator.OpDivide', name='Divide',
> priority=97.0, enabled=true, pluginType=CalculatorOp
> >>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingLineTool',
> name='Line', description='Straight line overlays',
> iconPath='/icons/tools/line.png', priority=97.0, enabled=true,
> pluginType=Tool
> >>> [DEBUG] - class='net.imagej.ui.swing.overlay.PolylineJHotDrawAdapter',
> priority=96.0, enabled=true, pluginType=JHotDrawAdapter
> >>> [DEBUG] - class='net.imagej.operator.OpAnd', name='AND',
> priority=96.0, enabled=true, pluginType=CalculatorOp
> >>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPolylineTool',
> name='Polyline', description='Polyline overlays',
> iconPath='/icons/tools/polyline.png', priority=96.0, enabled=true,
> pluginType=Tool
> >>> [DEBUG] - class='net.imagej.ui.swing.overlay.AngleJHotDrawAdapter',
> priority=95.0, enabled=true, pluginType=JHotDrawAdapter
> >>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingAngleTool',
> name='Angle', description='Angle overlays',
> iconPath='/icons/tools/angle.png', priority=95.0, enabled=true,
> pluginType=Tool
> >>> [DEBUG] - class='net.imagej.operator.OpOr', name='OR', priority=95.0,
> enabled=true, pluginType=CalculatorOp
> >>> [DEBUG] - class='net.imagej.ui.swing.overlay.PointJHotDrawOverlay',
> priority=94.0, enabled=true, pluginType=JHotDrawAdapter
> >>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPointTool',
> name='Point', description='Point overlays',
> iconPath='/icons/tools/point.png', priority=94.0, enabled=true,
> pluginType=Tool
> >>> [DEBUG] - class='net.imagej.operator.OpXor', name='XOR',
> priority=94.0, enabled=true, pluginType=CalculatorOp
> >>> [DEBUG] - class='net.imagej.operator.OpMin', name='Min',
> priority=93.0, enabled=true, pluginType=CalculatorOp
> >>> [DEBUG] - class='net.imagej.operator.OpMax', name='Max',
> priority=92.0, enabled=true, pluginType=CalculatorOp
> >>> [DEBUG] - class='net.imagej.operator.OpAverage', name='Average',
> priority=91.0, enabled=true, pluginType=CalculatorOp
> >>> [DEBUG] - class='net.imagej.operator.OpDifference', name='Difference',
> priority=90.0, enabled=true, pluginType=CalculatorOp
> >>> [DEBUG] - class='net.imagej.operator.OpCopy', name='Copy',
> priority=89.0, enabled=true, pluginType=CalculatorOp
> >>> [DEBUG] - class='net.imagej.operator.OpTransparentZero',
> name='Transparent-zero', priority=88.0, enabled=true,
> pluginType=CalculatorOp
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.tracking.oldlap.FastLAPTrackerFactory',
> priority=10.0, enabled=true, pluginType=SpotTrackerFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.tracking.oldlap.SimpleFastLAPTrackerFactory',
> priority=10.0, enabled=true, pluginType=SpotTrackerFactory
> >>> [DEBUG] - class='net.imagej.legacy.DefaultLegacyService',
> priority=1.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingChoiceRadioWidget',
> priority=1.0, enabled=true, pluginType=InputWidget
> >>> [DEBUG] - class='net.imagej.ops.onthefly.JavassistOptimizer',
> priority=1.0, enabled=true, pluginType=Optimizer
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.visualization.threedviewer.SpotDisplayer3DFactory',
> priority=1.0, enabled=true, pluginType=ViewFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.tracking.kdtree.NearestNeighborTrackerFactory',
> priority=1.0, enabled=true, pluginType=SpotTrackerFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.features.spot.SpotContrastAndSNRAnalyzerFactory',
> priority=1.0, enabled=true, pluginType=SpotAnalyzerFactory
> >>> [DEBUG] - class='net.imagej.ops.invert.InvertII', name='invert',
> priority=1.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToDouble',
> name='add', priority=0.6, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToLong',
> name='add', priority=0.5, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToFloat',
> name='add', priority=0.4, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToInteger',
> name='add', priority=0.3, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToShort',
> name='add', priority=0.2, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToByte',
> name='add', priority=0.1, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.assign.AndDataValuesWith', menu='Process
> > Math > AND...', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.app.AboutImageJ', label='About ImageJ...',
> menu='Help > About ImageJ...', iconPath='/icons/commands/information.png',
> priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.assign.AbsDataValues',
> menu='Process > Math > Abs...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionAdaptiveMedian',
> menu='Process > Noise > Noise Reduction > Adaptive Median', priority=0.0,
> enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.AddAxis',
> menu='Image > Axes > Add Axis...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.AddData',
> menu='Image > Data > Add Data...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.overlay.AddImage',
> menu='Image > Overlay > Add Image', iconPath='/icons/commands/bricks.png',
> priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.assign.AddNoiseToDataValues',
> menu='Process > Noise > Add Noise...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.assign.AddSpecifiedNoiseToDataValues',
> menu='Process > Noise > Add Specified Noise...', priority=0.0,
> enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.assign.AddToDataValues',
> menu='Process > Math > Add...', iconPath='/icons/commands/sum.png',
> priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionAlphaTrimmedMean',
> menu='Process > Noise > Noise Reduction > Alpha Trimmed Mean',
> priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.animation.AnimationOptions', menu='Image
> > Animation > Animation Options...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.options.OptionsAppearance', menu='Edit >
> Options > Appearance...', priority=0.0, enabled=true,
> pluginType=OptionsPlugin
> >>> [DEBUG] - class='net.imagej.ops.commands.threshold.GlobalThresholder',
> menu='Image > Threshold > Apply Threshold', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.options.OptionsArrowTool', menu='Edit >
> Options > Arrow Tool...', priority=0.0, enabled=true,
> pluginType=OptionsPlugin
> >>> [DEBUG] - class='net.imagej.plugins.commands.display.AutoContrast',
> menu='Image > Adjust > Auto-Contrast', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.axispos.AxisPositionBackward',
> menu='Image > Axes > Axis Position Backward', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.axispos.AxisPositionForward',
> menu='Image > Axes > Axis Position Forward', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.misc.Benchmark',
> menu='Plugins > Utilities > Benchmark',
> iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.Binner',
> menu='Image > Transform > Bin...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.binary.Binarize',
> menu='Process > Binary > Binarize...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.display.interactive.BrightnessContrast',
> menu='Image > Adjust > Brightness/Contrast...',
> iconPath='/icons/commands/contrast.png', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.debug.ButtonDemo',
> menu='Plugins > Sandbox > Button Demo', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.display.CaptureImage',
> menu='Plugins > Utilities > Capture Image', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.display.CaptureScreen',
> menu='Plugins > Utilities > Capture Screen', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.typechange.TypeChanger',
> menu='Image > Type > Change...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.display.ChannelsTool',
> menu='Image > Color > Channels Tool...',
> iconPath='/icons/commands/color_wheel.png', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.options.OptionsChannels', menu='Edit >
> Options > Channels...', priority=0.0, enabled=true, pluginType=OptionsPlugin
> >>> [DEBUG] - class='org.scijava.plugins.commands.io.ClearRecent',
> label='Clear Recent', menu='File > Open Recent > Clear List', priority=0.0,
> enabled=true, pluginType=Command
> >>> [DEBUG] - class='org.scijava.plugins.commands.display.Close',
> menu='File > Close', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.binary.CloseBinaryImage',
> menu='Process > Binary > Close', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='org.scijava.plugins.commands.display.CloseAll',
> menu='File > Close All', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.options.OptionsCompatibility', menu='Edit
> > Options > Compatibility...', priority=0.0, enabled=true,
> pluginType=OptionsPlugin
> >>> [DEBUG] - class='net.imagej.options.OptionsCompiler', menu='Edit >
> Options > Compiler...', priority=0.0, enabled=true, pluginType=OptionsPlugin
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionContraharmonicMean',
> menu='Process > Noise > Noise Reduction > Contraharmonic Mean',
> priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.options.OptionsConversions', menu='Edit >
> Options > Conversions...', priority=0.0, enabled=true,
> pluginType=OptionsPlugin
> >>> [DEBUG] - class='net.imagej.ops.commands.convert.ConvertImgPlus',
> menu='Image > Convert', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.ops.commands.convolve.Convolve',
> menu='Image > Convolve', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.app.CopyToSystem',
> menu='Edit > Copy To System', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.binary.CreateMask',
> menu='Process > Binary > Create Mask...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.app.CreateShortcut',
> menu='Plugins > Shortcuts > Create Shortcut...',
> iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.CropImage',
> menu='Image > Crop', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.options.OptionsDicom', menu='Edit >
> Options > DICOM...', priority=0.0, enabled=true, pluginType=OptionsPlugin
> >>> [DEBUG] - class='net.imagej.options.OptionsOverlay', label='Default
> Overlay Settings', menu='Image > Overlay > Overlay Options...',
> priority=0.0, enabled=true, pluginType=OptionsPlugin
> >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.DeleteAxis',
> menu='Image > Axes > Delete Axis...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.DeleteData',
> menu='Image > Data > Delete Data...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.display.interactive.DeleteThreshold',
> menu='Image > Adjust > Delete Threshold', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.display.DeselectOverlays', menu='Edit >
> Selection > Deselect Overlays', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='org.scijava.ui.swing.commands.DialogPromptDemo',
> menu='Plugins > Sandbox > Dialog Prompt Demo', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.binary.DilateBinaryImage', menu='Process
> > Binary > Dilate', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.assign.DivideDataValuesBy',
> menu='Process > Math > Divide...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='org.scijava.plugins.commands.debug.DumpStack',
> menu='Plugins > Debug > Dump Stack', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.DuplicateImage',
> menu='Image > Duplicate', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.imglib.DuplicateImageContext',
> menu='Duplicate...', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsEast',
> menu='Process > Shadows > East', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.EditAxes',
> menu='Image > Axes > Edit Axes...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.assign.EquationDataValues',
> menu='Process > Math > Equation...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.binary.ErodeBinaryImage',
> menu='Process > Binary > Erode', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.assign.ExpDataValues',
> menu='Process > Math > Exp...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.assign.FillDataValues',
> menu='Edit > Fill', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='org.scijava.ui.swing.commands.CommandFinder',
> menu='Plugins > Utilities > Find Commands...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.neigh.FindEdges',
> menu='Process > Find Edges', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.display.Flatten',
> menu='Image > Overlay > Flatten', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.FlipAxis',
> menu='Image > Transform > Flip Axis', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.rotate.FlipHorizontally',
> menu='Image > Transform > Flip Horizontally', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.rotate.FlipVertically',
> menu='Image > Transform > Flip Vertically', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.tools.FloodFillToolConfig',
> label='Flood Fill Tool', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.options.OptionsFont', menu='Edit > Options
> > Fonts...', priority=0.0, enabled=true, pluginType=OptionsPlugin
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.overlay.FromOverlayManager', menu='Image
> > Overlay > From Overlay Manager', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.assign.GammaDataValues',
> menu='Process > Math > Gamma...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.GaussianBlur',
> menu='Process > Filters > Gaussian Blur...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionGeometricMean',
> menu='Process > Noise > Noise Reduction > Geometric Mean', priority=0.0,
> enabled=true, pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionHarmonicMean',
> menu='Process > Noise > Noise Reduction > Harmonic Mean', priority=0.0,
> enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.display.HistogramPlot',
> menu='Analyze > Histogram Plot', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.calculator.ImageCalculator',
> menu='Process > Image Calculator...',
> iconPath='/icons/commands/calculator.png', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.io.OpenDataset',
> menu='File > Import > Image... ', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.io.SaveDataset',
> menu='File > Export > Image...  ', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.app.ImageJWebsite',
> menu='Help > ImageJ Website...', iconPath='/icons/commands/world_link.png',
> priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.legacy.ImageJ2Options', label='ImageJ2
> Options', menu='Edit > Options > ImageJ2...', priority=0.0, enabled=true,
> pluginType=OptionsPlugin
> >>> [DEBUG] - class='net.imagej.options.OptionsInputOutput', menu='Edit >
> Options > Input/Output...', priority=0.0, enabled=true,
> pluginType=OptionsPlugin
> >>> [DEBUG] - class='net.imagej.plugins.commands.debug.InspectImg',
> menu='Plugins > Debug > Inspect Image', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='org.scijava.ui.swing.commands.InspectObjects',
> menu='Plugins > Debug > Inspect Objects', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='org.scijava.plugins.commands.debug.InvalidCommandDemo$InvalidCommand',
> menu='Plugins > Debug > Invalid Command', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.assign.InvertDataValues',
> menu='Edit > Invert...', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.lut.LUTSelector', label='LUT Selector',
> menu='Image > Lookup Tables > Select...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.overlay.OverlayLabels',
> menu='Image > Overlay > Labels...', iconPath='/icons/commands/bricks.png',
> priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.options.OptionsLineWidth', menu='Edit >
> Options > Line Width...', priority=0.0, enabled=true,
> pluginType=OptionsPlugin
> >>> [DEBUG] - class='net.imagej.plugins.commands.app.ListShortcuts',
> menu='Plugins > Shortcuts > List Shortcuts...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.assign.LogDataValues',
> menu='Process > Math > Log...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='org.scijava.ui.swing.options.OptionsLookAndFeel',
> menu='Edit > Options > Look and Feel...', priority=0.0, enabled=true,
> pluginType=OptionsPlugin
> >>> [DEBUG] - class='net.imagej.plugins.commands.binary.MakeBinary',
> menu='Process > Binary > Make Binary...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.overlay.ConvertToMask',
> menu='Process > Binary > Make Mask Overlay...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.debug.MandelbrotSetImage', menu='Plugins
> > Sandbox > Mandelbrot Set', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.assign.MaxDataValues',
> menu='Process > Math > Max...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMax',
> menu='Process > Noise > Noise Reduction > Maximum', priority=0.0,
> enabled=true, pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMean',
> menu='Process > Noise > Noise Reduction > Mean', priority=0.0,
> enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.debug.MeasurementDemo',
> menu='Plugins > Sandbox > Measurement Demo', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMedian',
> menu='Process > Noise > Noise Reduction > Median', priority=0.0,
> enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.options.OptionsMemoryAndThreads',
> menu='Edit > Options > Memory & Threads...', priority=0.0, enabled=true,
> pluginType=OptionsPlugin
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMidpoint',
> menu='Process > Noise > Noise Reduction > Midpoint', priority=0.0,
> enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.assign.MinDataValues',
> menu='Process > Math > Min...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMin',
> menu='Process > Noise > Noise Reduction > Minimum', priority=0.0,
> enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.options.OptionsMisc', menu='Edit > Options
> > Misc...', priority=0.0, enabled=true, pluginType=OptionsPlugin
> >>> [DEBUG] - class='net.imagej.legacy.plugin.MixedWorldCommand',
> menu='Plugins > Sandbox > Mixed World Command', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.debug.MultidimImage',
> menu='Plugins > Sandbox > Multidimensional Test Image', priority=0.0,
> enabled=true, pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.assign.MultiplyDataValuesBy',
> menu='Process > Math > Multiply...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.NanBackground',
> menu='Process > Math > NaN Background', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.io.NewImage', label='New
> Image...', menu='File > New > Image...',
> iconPath='/icons/commands/picture.png', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNorth',
> menu='Process > Shadows > North', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.correlate.ShadowsNortheast',
> menu='Process > Shadows > Northeast', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.correlate.ShadowsNorthwest',
> menu='Process > Shadows > Northwest', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.assign.OrDataValuesWith',
> menu='Process > Math > OR...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.binary.OpenBinaryImage',
> menu='Process > Binary > Open', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='org.scijava.plugins.commands.io.OpenFile', menu='File
> > Open...', iconPath='/icons/commands/folder_picture.png', priority=0.0,
> enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomOriginalScale',
> menu='Image > Zoom > Original Scale', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.display.interactive.OrthogonalViews',
> menu='Image > Stacks > Orthogonal Views',
> iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.ui.swing.commands.OverlayManager',
> menu='Image > Overlay > Overlay Manager', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.overlay.OverlayProperties',
> label='Overlay Properties...', menu='Image > Overlay > Properties...',
> priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.tools.PaintBrushToolConfig',
> label='Paintbrush Tool', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='org.scijava.plugins.commands.debug.ParamAssignOrder',
> menu='Plugins > Sandbox > Parameter Assignment Order', priority=0.0,
> enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.tools.PencilToolConfig',
> label='Pencil Tool', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='fiji.DefaultFijiService', priority=0.0, enabled=true,
> pluginType=Service
> >>> [DEBUG] - class='fiji.patches.FijiAppConfiguration', priority=0.0,
> enabled=true, pluginType=LegacyAppConfiguration
> >>> [DEBUG] - class='fiji.patches.OldLegacyEditor', priority=0.0,
> enabled=true, pluginType=LegacyEditor
> >>> [DEBUG] - class='fiji.patches.OldAppConfiguration', priority=0.0,
> enabled=true, pluginType=LegacyAppConfiguration
> >>> [DEBUG] - class='net.imglib2.meta.units.DefaultUnitService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTObjectWidget',
> priority=0.0, enabled=true, pluginType=InputWidget
> >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTToggleWidget',
> priority=0.0, enabled=true, pluginType=InputWidget
> >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTChoiceWidget',
> priority=0.0, enabled=true, pluginType=InputWidget
> >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTNumberWidget',
> priority=0.0, enabled=true, pluginType=InputWidget
> >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTTextWidget',
> priority=0.0, enabled=true, pluginType=InputWidget
> >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTFileWidget',
> priority=0.0, enabled=true, pluginType=InputWidget
> >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTButtonWidget',
> priority=0.0, enabled=true, pluginType=InputWidget
> >>> [DEBUG] - class='net.imagej.plugins.uploaders.ssh.SSHFileUploader',
> priority=0.0, enabled=true, pluginType=Uploader
> >>> [DEBUG] - class='net.imagej.plugins.uploaders.ssh.SFTPFileUploader',
> priority=0.0, enabled=true, pluginType=Uploader
> >>> [DEBUG] - class='net.imagej.plugins.uploaders.webdav.WebDAVUploader',
> priority=0.0, enabled=true, pluginType=Uploader
> >>> [DEBUG] -
> class='org.scijava.plugins.text.markdown.MarkdownTextFormat', priority=0.0,
> enabled=true, pluginType=TextFormat
> >>> [DEBUG] - class='net.imagej.ui.awt.AWTRenderingService', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.ui.awt.AWTScreenCaptureService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.object.DefaultObjectService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.convert.DefaultConverter', priority=0.0,
> enabled=true, pluginType=Converter
> >>> [DEBUG] - class='org.scijava.convert.DefaultConvertService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.input.DefaultInputService', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.ui.DefaultUIService', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.ui.dnd.DefaultDragAndDropService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.ui.dnd.ListDragAndDropHandler',
> priority=0.0, enabled=true, pluginType=DragAndDropHandler
> >>> [DEBUG] - class='org.scijava.ui.dnd.ScriptFileDragAndDropHandler',
> priority=0.0, enabled=true, pluginType=DragAndDropHandler
> >>> [DEBUG] - class='org.scijava.ui.console.UIArgument', priority=0.0,
> enabled=true, pluginType=ConsoleArgument
> >>> [DEBUG] - class='org.scijava.plugin.DefaultPluginService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.text.DefaultTextService', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.display.DefaultDisplayService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.prefs.DefaultPrefService', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.io.DefaultRecentFileService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.io.console.OpenArgument', priority=0.0,
> enabled=true, pluginType=ConsoleArgument
> >>> [DEBUG] - class='org.scijava.io.DefaultIOService', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.widget.DefaultWidgetService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.menu.DefaultMenuService', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.tool.DefaultToolService', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.app.DefaultAppService', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.app.DefaultStatusService', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.module.DefaultModuleService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.welcome.DefaultWelcomeService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.thread.DefaultThreadService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.script.io.ScriptIOPlugin', priority=0.0,
> enabled=true, pluginType=IOPlugin
> >>> [DEBUG] - class='org.scijava.script.DefaultScriptHeaderService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.event.DefaultEventHistory', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.platform.DefaultPlatformService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.options.DefaultOptionsService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.command.DefaultCommandService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.command.console.RunArgument',
> priority=0.0, enabled=true, pluginType=ConsoleArgument
> >>> [DEBUG] - class='org.scijava.console.DefaultConsoleService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.SciJava', priority=0.0, enabled=true,
> pluginType=Gateway
> >>> [DEBUG] - class='net.imagej.operator.DefaultCalculatorService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.autoscale.DefaultAutoscaleService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.sampler.DefaultSamplerService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.lut.io.LUTIOPlugin', priority=0.0,
> enabled=true, pluginType=IOPlugin
> >>> [DEBUG] - class='net.imagej.display.DefaultDatasetView', priority=0.0,
> enabled=true, pluginType=DataView
> >>> [DEBUG] - class='net.imagej.display.DefaultImageDisplay',
> priority=0.0, enabled=true, pluginType=Display
> >>> [DEBUG] - class='net.imagej.display.DefaultZoomService', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.display.DefaultOverlayService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.display.DefaultImageDisplayService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.display.DefaultOverlayView', priority=0.0,
> enabled=true, pluginType=DataView
> >>> [DEBUG] - class='net.imagej.display.DefaultWindowService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.types.DataType32BitSignedFloat',
> priority=0.0, enabled=true, pluginType=DataType
> >>> [DEBUG] - class='net.imagej.types.DataType12BitUnsignedInteger',
> priority=0.0, enabled=true, pluginType=DataType
> >>> [DEBUG] - class='net.imagej.types.DataType64BitSignedFloat',
> priority=0.0, enabled=true, pluginType=DataType
> >>> [DEBUG] - class='net.imagej.types.DataType8BitSignedInteger',
> priority=0.0, enabled=true, pluginType=DataType
> >>> [DEBUG] - class='net.imagej.types.DataType32BitUnsignedInteger',
> priority=0.0, enabled=true, pluginType=DataType
> >>> [DEBUG] - class='net.imagej.types.DataType32BitSignedInteger',
> priority=0.0, enabled=true, pluginType=DataType
> >>> [DEBUG] - class='net.imagej.types.DataType64BitSignedInteger',
> priority=0.0, enabled=true, pluginType=DataType
> >>> [DEBUG] - class='net.imagej.types.DataType16BitSignedInteger',
> priority=0.0, enabled=true, pluginType=DataType
> >>> [DEBUG] - class='net.imagej.types.DataType16BitUnsignedInteger',
> priority=0.0, enabled=true, pluginType=DataType
> >>> [DEBUG] - class='net.imagej.types.DataType1BitUnsignedInteger',
> priority=0.0, enabled=true, pluginType=DataType
> >>> [DEBUG] - class='net.imagej.types.DataType8BitUnsignedInteger',
> priority=0.0, enabled=true, pluginType=DataType
> >>> [DEBUG] - class='net.imagej.types.DefaultDataTypeService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.DefaultImgPlusService', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.minmax.DefaultMinMaxMethod', priority=0.0,
> enabled=true, pluginType=MinMaxMethod
> >>> [DEBUG] - class='net.imagej.ui.DefaultImageJUIService', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.ui.dnd.LUTFileDragAndDropHandler',
> priority=0.0, enabled=true, pluginType=DragAndDropHandler
> >>> [DEBUG] - class='net.imagej.measure.DefaultStatisticsService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.measure.DefaultMeasurementService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.threshold.DefaultThresholdService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.animation.DefaultAnimationService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.table.DefaultTableDisplay', priority=0.0,
> enabled=true, pluginType=Display
> >>> [DEBUG] - class='net.imagej.DefaultDatasetService', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='io.scif.io.URLHandle', priority=0.0, enabled=true,
> pluginType=IStreamAccess
> >>> [DEBUG] - class='io.scif.codec.LZWCodec', priority=0.0, enabled=true,
> pluginType=Codec
> >>> [DEBUG] - class='io.scif.io.DefaultNIOService', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='io.scif.img.converters.DefaultPlaneConverterService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='io.scif.img.cell.SCIFIOCellCacheCleaningProvider',
> priority=0.0, enabled=true, pluginType=RefProvider
> >>> [DEBUG] - class='io.scif.codec.JPEG2000Codec', priority=0.0,
> enabled=true, pluginType=Codec
> >>> [DEBUG] - class='io.scif.img.DefaultImgUtilityService', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='io.scif.gui.DefaultGUIService', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='io.scif.filters.DimensionSwapper', priority=0.0,
> enabled=true, pluginType=Filter
> >>> [DEBUG] - class='io.scif.xml.DefaultXMLService', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='io.scif.codec.HuffmanCodec', priority=0.0,
> enabled=true, pluginType=Codec
> >>> [DEBUG] - class='io.scif.refs.DefaultRefManagerService', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='io.scif.services.DefaultFormatService', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='io.scif.codec.RPZACodec', priority=0.0, enabled=true,
> pluginType=Codec
> >>> [DEBUG] - class='io.scif.codec.MJPBCodec', priority=0.0, enabled=true,
> pluginType=Codec
> >>> [DEBUG] - class='io.scif.codec.PassthroughCodec', priority=0.0,
> enabled=true, pluginType=Codec
> >>> [DEBUG] - class='io.scif.filters.PlaneSeparatorMetadata',
> priority=0.0, enabled=true, pluginType=MetadataWrapper
> >>> [DEBUG] - class='io.scif.filters.ChannelFiller', priority=0.0,
> enabled=true, pluginType=Filter
> >>> [DEBUG] - class='io.scif.codec.PackbitsCodec', priority=0.0,
> enabled=true, pluginType=Codec
> >>> [DEBUG] - class='io.scif.filters.MinMaxFilter', priority=0.0,
> enabled=true, pluginType=Filter
> >>> [DEBUG] - class='io.scif.io.BZip2Handle', priority=0.0, enabled=true,
> pluginType=IStreamAccess
> >>> [DEBUG] - class='io.scif.services.DefaultTranslatorService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='io.scif.img.cell.RefMapCleaningProvider',
> priority=0.0, enabled=true, pluginType=RefProvider
> >>> [DEBUG] - class='io.scif.codec.QTRLECodec', priority=0.0,
> enabled=true, pluginType=Codec
> >>> [DEBUG] - class='io.scif.io.GZipHandle', priority=0.0, enabled=true,
> pluginType=IStreamAccess
> >>> [DEBUG] - class='io.scif.codec.LosslessJPEGCodec', priority=0.0,
> enabled=true, pluginType=Codec
> >>> [DEBUG] - class='io.scif.codec.MSVideoCodec', priority=0.0,
> enabled=true, pluginType=Codec
> >>> [DEBUG] - class='io.scif.filters.PlaneSeparator', priority=0.0,
> enabled=true, pluginType=Filter
> >>> [DEBUG] - class='io.scif.codec.Base64Codec', priority=0.0,
> enabled=true, pluginType=Codec
> >>> [DEBUG] - class='io.scif.SCIFIO', priority=0.0, enabled=true,
> pluginType=Gateway
> >>> [DEBUG] - class='io.scif.codec.DefaultCodecService', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='io.scif.codec.JPEGCodec', priority=0.0, enabled=true,
> pluginType=Codec
> >>> [DEBUG] - class='io.scif.img.ImgPlusCtxCleaningProvider',
> priority=0.0, enabled=true, pluginType=RefProvider
> >>> [DEBUG] - class='io.scif.codec.LuraWaveCodec', priority=0.0,
> enabled=true, pluginType=Codec
> >>> [DEBUG] - class='io.scif.img.cell.SCIFIOCellCleaningProvider',
> priority=0.0, enabled=true, pluginType=RefProvider
> >>> [DEBUG] - class='io.scif.codec.MSRLECodec', priority=0.0,
> enabled=true, pluginType=Codec
> >>> [DEBUG] - class='io.scif.img.cell.cache.MapDBCache', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='io.scif.DefaultMetadataService', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='io.scif.img.cell.SCIFIOCellImgCleaningProvider',
> priority=0.0, enabled=true, pluginType=RefProvider
> >>> [DEBUG] - class='io.scif.filters.FileStitcher', priority=0.0,
> enabled=true, pluginType=Filter
> >>> [DEBUG] - class='io.scif.services.DefaultFilePatternService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='io.scif.io.ZipHandle', priority=0.0, enabled=true,
> pluginType=IStreamAccess
> >>> [DEBUG] - class='io.scif.codec.NikonCodec', priority=0.0,
> enabled=true, pluginType=Codec
> >>> [DEBUG] - class='io.scif.formats.tiff.DefaultTiffService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='io.scif.services.DefaultLocationService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='io.scif.codec.ZlibCodec', priority=0.0, enabled=true,
> pluginType=Codec
> >>> [DEBUG] - class='io.scif.services.JAIIIOServiceImpl', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='io.scif.formats.qt.DefaultQTJavaService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Batch',
> priority=0.0, enabled=true, pluginType=ConsoleArgument
> >>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$IJPath',
> priority=0.0, enabled=true, pluginType=ConsoleArgument
> >>> [DEBUG] - class='net.imagej.legacy.plugin.LegacyAutoImporter',
> priority=0.0, enabled=true, pluginType=AutoImporter
> >>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Macro',
> priority=0.0, enabled=true, pluginType=ConsoleArgument
> >>> [DEBUG] - class='net.imagej.legacy.LegacyJavaRunner', priority=0.0,
> enabled=true, pluginType=JavaRunner
> >>> [DEBUG] -
> class='net.imagej.legacy.display.DefaultImagePlusDisplayViewer',
> priority=0.0, enabled=true, pluginType=DisplayViewer
> >>> [DEBUG] - class='net.imagej.legacy.display.DefaultImagePlusDisplay',
> priority=0.0, enabled=true, pluginType=Display
> >>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Run',
> priority=0.0, enabled=true, pluginType=ConsoleArgument
> >>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Filename',
> priority=0.0, enabled=true, pluginType=ConsoleArgument
> >>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Debug',
> priority=0.0, enabled=true, pluginType=ConsoleArgument
> >>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Eval',
> priority=0.0, enabled=true, pluginType=ConsoleArgument
> >>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Port',
> priority=0.0, enabled=true, pluginType=ConsoleArgument
> >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingDateWidget',
> priority=0.0, enabled=true, pluginType=InputWidget
> >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingFileWidget',
> priority=0.0, enabled=true, pluginType=InputWidget
> >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingChoiceWidget',
> priority=0.0, enabled=true, pluginType=InputWidget
> >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingNumberWidget',
> priority=0.0, enabled=true, pluginType=InputWidget
> >>> [DEBUG] - class='org.scijava.ui.swing.SwingIconService', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] -
> class='org.scijava.ui.swing.viewer.text.SwingTextDisplayViewer',
> priority=0.0, enabled=true, pluginType=DisplayViewer
> >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingObjectWidget',
> priority=0.0, enabled=true, pluginType=InputWidget
> >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingToggleWidget',
> priority=0.0, enabled=true, pluginType=InputWidget
> >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingTextWidget',
> priority=0.0, enabled=true, pluginType=InputWidget
> >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingColorWidget',
> priority=0.0, enabled=true, pluginType=InputWidget
> >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingButtonWidget',
> priority=0.0, enabled=true, pluginType=InputWidget
> >>> [DEBUG] -
> class='org.scijava.plugins.scripting.java.CommandJavaRunner', priority=0.0,
> enabled=true, pluginType=JavaRunner
> >>> [DEBUG] -
> class='org.scijava.plugins.scripting.java.DefaultJavaService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] -
> class='net.imagej.ui.swing.sdi.viewer.SwingSdiImageDisplayViewer',
> priority=0.0, enabled=true, pluginType=DisplayViewer
> >>> [DEBUG] -
> class='net.imagej.ui.swing.viewer.table.SwingTableDisplayViewer',
> priority=0.0, enabled=true, pluginType=DisplayViewer
> >>> [DEBUG] - class='net.imagej.ui.swing.overlay.JHotDrawService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] -
> class='net.imagej.ui.swing.mdi.viewer.SwingMdiImageDisplayViewer',
> priority=0.0, enabled=true, pluginType=DisplayViewer
> >>> [DEBUG] - class='net.imagej.ui.swing.widget.SwingColorTableWidget',
> priority=0.0, enabled=true, pluginType=InputWidget
> >>> [DEBUG] - class='net.imagej.ui.swing.widget.SwingDimSelectionWidget',
> priority=0.0, enabled=true, pluginType=InputWidget
> >>> [DEBUG] - class='net.imagej.ui.swing.widget.SwingHistogramWidget',
> priority=0.0, enabled=true, pluginType=InputWidget
> >>> [DEBUG] - class='net.imagej.updater.FileUploader', priority=0.0,
> enabled=true, pluginType=Uploader
> >>> [DEBUG] - class='net.imagej.updater.DefaultUpdateService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.updater.DefaultUploaderService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.ImageJ', priority=0.0, enabled=true,
> pluginType=Gateway
> >>> [DEBUG] - class='net.imagej.ops.DefaultOpService', priority=0.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.ops.threshold.LocalMean', priority=0.0,
> enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.DefaultOpMatchingService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.plugins.commands.dataset.LoadDataset',
> priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.overlay.SelectedManagerOverlayProperties',
> priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.misc.ApplyLookupTable',
> priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] -
> class='org.scijava.plugins.scripting.jruby.JRubyScriptHeader',
> priority=0.0, enabled=true, pluginType=ScriptHeader
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.action.TrackBranchAnalysis$Factory',
> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.features.track.TrackLocationAnalyzer',
> priority=0.0, enabled=true, pluginType=TrackAnalyzer
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.visualization.hyperstack.HyperStackDisplayerFactory',
> priority=0.0, enabled=true, pluginType=ViewFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.features.edges.EdgeTimeLocationAnalyzer',
> priority=0.0, enabled=true, pluginType=EdgeAnalyzer
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.action.ResetRadiusAction$Factory',
> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.action.RecalculateFeatureAction$Factory',
> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.action.ISBIChallengeExporter$Factory',
> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.action.MergeFileAction$Factory', priority=0.0,
> enabled=true, pluginType=TrackMateActionFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.features.spot.SpotRadiusEstimatorFactory',
> priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.features.track.TrackBranchingAnalyzer',
> priority=0.0, enabled=true, pluginType=TrackAnalyzer
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.action.PlotNSpotsVsTimeAction$Factory',
> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.action.ExportStatsToIJAction$Factory',
> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.features.edges.EdgeTargetAnalyzer',
> priority=0.0, enabled=true, pluginType=EdgeAnalyzer
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.features.track.TrackDurationAnalyzer',
> priority=0.0, enabled=true, pluginType=TrackAnalyzer
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.features.spot.SpotIntensityAnalyzerFactory',
> priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.features.edges.EdgeVelocityAnalyzer',
> priority=0.0, enabled=true, pluginType=EdgeAnalyzer
> >>> [DEBUG] - class='fiji.plugin.trackmate.detection.LogDetectorFactory',
> priority=0.0, enabled=true, pluginType=SpotDetectorFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.action.ExportTracksToXML$Factory',
> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.action.LinkNew3DViewerAction$Factory',
> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.tracking.oldlap.SimpleLAPTrackerFactory',
> priority=0.0, enabled=true, pluginType=SpotTrackerFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.action.ResetSpotTimeFeatureAction$Factory',
> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.action.RadiusToEstimatedAction$Factory',
> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.action.IcyTrackExporter$Factory',
> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.action.CaptureOverlayAction$Factory',
> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.tracking.sparselap.SimpleSparseLAPTrackerFactory',
> priority=0.0, enabled=true, pluginType=SpotTrackerFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.features.spot.SpotMorphologyAnalyzerFactory',
> priority=0.0, enabled=false, pluginType=SpotAnalyzerFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.features.track.TrackSpotQualityFeatureAnalyzer',
> priority=0.0, enabled=true, pluginType=TrackAnalyzer
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.action.CopyOverlayAction$Factory',
> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.tracking.sparselap.SparseLAPTrackerFactory',
> priority=0.0, enabled=true, pluginType=SpotTrackerFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.detection.ManualDetectorFactory',
> priority=0.0, enabled=true, pluginType=SpotDetectorFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.features.manual.ManualSpotColorAnalyzerFactory',
> priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory
> >>> [DEBUG] - class='fiji.plugin.trackmate.detection.DogDetectorFactory',
> priority=0.0, enabled=true, pluginType=SpotDetectorFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.action.ExtractTrackStackAction$Factory',
> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.tracking.oldlap.LAPTrackerFactory',
> priority=0.0, enabled=true, pluginType=SpotTrackerFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.features.manual.ManualEdgeColorAnalyzer',
> priority=0.0, enabled=true, pluginType=EdgeAnalyzer
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.features.spot.SpotContrastAnalyzerFactory',
> priority=0.0, enabled=false, pluginType=SpotAnalyzerFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.features.track.TrackSpeedStatisticsAnalyzer',
> priority=0.0, enabled=true, pluginType=TrackAnalyzer
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.detection.DownsampleLogDetectorFactory',
> priority=0.0, enabled=true, pluginType=SpotDetectorFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.visualization.trackscheme.TrackSchemeFactory',
> priority=0.0, enabled=true, pluginType=ViewFactory
> >>> [DEBUG] -
> class='fiji.plugin.trackmate.features.track.TrackIndexAnalyzer',
> priority=0.0, enabled=true, pluginType=TrackAnalyzer
> >>> [DEBUG] - class='io.scif.cli.commands.Help', priority=0.0,
> enabled=true, pluginType=SCIFIOToolCommand
> >>> [DEBUG] - class='io.scif.cli.commands.Show', priority=0.0,
> enabled=true, pluginType=SCIFIOToolCommand
> >>> [DEBUG] - class='io.scif.cli.commands.Info', priority=0.0,
> enabled=true, pluginType=SCIFIOToolCommand
> >>> [DEBUG] - class='io.scif.cli.commands.Convert', priority=0.0,
> enabled=true, pluginType=SCIFIOToolCommand
> >>> [DEBUG] - class='io.scif.ome.commands.OMEXMLToolCommand',
> priority=0.0, enabled=true, pluginType=SCIFIOToolCommand
> >>> [DEBUG] - class='io.scif.ome.translators.DefaultOMETranslator',
> priority=0.0, enabled=true, pluginType=ToOMETranslator
> >>> [DEBUG] - class='io.scif.ome.services.DefaultOMEXMLService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='io.scif.ome.services.DefaultOMEMetadataService',
> priority=0.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat', priority=0.0,
> enabled=true, pluginType=Format
> >>> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat$OMETranslator',
> priority=0.0, enabled=true, pluginType=Translator
> >>> [DEBUG] - class='io.scif.tools.commands.Show', priority=0.0,
> enabled=true, pluginType=SCIFIOToolCommand
> >>> [DEBUG] - class='io.scif.tools.commands.Help', priority=0.0,
> enabled=true, pluginType=SCIFIOToolCommand
> >>> [DEBUG] - class='io.scif.tools.commands.Info', priority=0.0,
> enabled=true, pluginType=SCIFIOToolCommand
> >>> [DEBUG] - class='io.scif.tools.commands.Convert', priority=0.0,
> enabled=true, pluginType=SCIFIOToolCommand
> >>> [DEBUG] - class='io.scif.lifesci.SDTFormat', priority=0.0,
> enabled=true, pluginType=Format
> >>> [DEBUG] - class='net.imagej.options.OptionsPointTool', menu='Edit >
> Options > Point Tool...', priority=0.0, enabled=true,
> pluginType=OptionsPlugin
> >>> [DEBUG] - class='net.imagej.plugins.commands.debug.PointSetDemo',
> menu='Plugins > Sandbox > PointSet Demo', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.assign.PowerDataValues',
> menu='Process > Math > Power...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.app.Preferences', label='Preferences',
> menu='File > Preferences', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.options.OptionsProfilePlot', menu='Edit >
> Options > Profile Plot Options...', priority=0.0, enabled=true,
> pluginType=OptionsPlugin
> >>> [DEBUG] - class='net.imagej.ops.commands.project.ProjectCommand',
> menu='Image > Threshold > Project', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.options.OptionsProxy', menu='Edit >
> Options > Proxy Settings...', priority=0.0, enabled=true,
> pluginType=OptionsPlugin
> >>> [DEBUG] - class='net.imagej.app.QuitProgram', label='Quit', menu='File
> > Quit', iconPath='/icons/commands/door_in.png', priority=0.0,
> enabled=true, pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.assign.noisereduce.RadialNeighborhoodSpecifier',
> label='Radial Neighborhood Specification', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.assign.ReciprocalDataValues',
> menu='Process > Math > Reciprocal...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.assign.noisereduce.RectangularNeighborhoodSpecifier',
> label='Rectangular Neighborhood Specification', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.display.RemoveOverlay',
> menu='Image > Overlay > Remove Overlay', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.display.RemoveOverlayReferences',
> menu='Image > Overlay > Remove Overlay References', priority=0.0,
> enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.ReorderAxis',
> menu='Image > Axes > Reorder Axis', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.ReorderData',
> menu='Image > Data > Reorder Data...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.options.OptionsReset', menu='Edit >
> Options > Reset', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.ResizeImage',
> menu='Image > Adjust > Resize...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.ResliceImage',
> menu='Image > Stacks > Reslice...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.io.RevertImage',
> menu='File > Revert', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.rotate.Rotate90DegreesLeft', menu='Image
> > Transform > Rotate 90 Degrees Left', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.rotate.Rotate90DegreesRight',
> menu='Image > Transform > Rotate 90 Degrees Right', priority=0.0,
> enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.RotateImageXY',
> menu='Image > Transform > Rotate...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.options.OptionsRoundedRectangleTool',
> menu='Edit > Options > Rounded Rect Tool...', priority=0.0, enabled=true,
> pluginType=OptionsPlugin
> >>> [DEBUG] - class='org.scijava.plugins.commands.script.RunScript',
> menu='Plugins > Run Script...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.SaltAndPepper',
> menu='Process > Noise > Salt and Pepper', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.io.SaveImage', menu='File
> > Save', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.io.SaveAsImage',
> menu='File > Save As...', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.ui.swing.script.ScriptEditor', menu='File
> > New > Script...', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.display.SelectOverlays',
> menu='Edit > Selection > Select Overlays', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.display.SelectView',
> menu='Edit > Selection > Select View', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.display.SelectWindow', label='Select
> Window...', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.legacy.plugin.GetPath', label='Select
> path', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.axispos.SetActiveAxis',
> menu='Image > Axes > Set Active Axis...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.axispos.SetAxisPosition',
> menu='Image > Axes > Set Axis Position...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomSet', label='Set
> Zoom...', menu='Image > Zoom > Set...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.assign.SetDataValues',
> menu='Process > Math > Set...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsDemo',
> menu='Process > Shadows > Shadows Demo', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.correlate.SharpenDataValues',
> menu='Process > Sharpen', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.misc.ShowInfo',
> menu='Image > Show Info...', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.display.ShowLUT',
> menu='Image > Color > Show LUT', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.display.ShowLUTAsTable',
> menu='Image > Color > Show LUT As Table', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.correlate.SmoothDataValues',
> menu='Process > Smooth', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsSouth',
> menu='Process > Shadows > South', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.correlate.ShadowsSoutheast',
> menu='Process > Shadows > Southeast', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.correlate.ShadowsSouthwest',
> menu='Process > Shadows > Southwest', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.overlay.SelectionSpecify', menu='Edit >
> Selection > Specify...', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.display.SpectralComposite', menu='Image
> > Color > Spectral Composite...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.restructure.SplitChannelsContext',
> menu='Split Channels', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.tools.SprayCanToolConfig',
> label='Spray Can Tool', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.assign.SquareRootDataValues',
> menu='Process > Math > Square Root...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.assign.SquareDataValues',
> menu='Process > Math > Square...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.animation.StartAnimation', menu='Image >
> Animation > Start Animation', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.debug.StatisticsDemo',
> menu='Plugins > Sandbox > Statistics Demo', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.animation.StopAllAnimations',
> menu='Image > Animation > Stop All Animations', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.animation.StopAnimation',
> menu='Image > Animation > Stop Animation', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='org.scijava.plugins.commands.debug.ShowSubscribers',
> menu='Plugins > Debug > Subscribers', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.assign.SubtractFromDataValues',
> menu='Process > Math > Subtract...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.legacy.plugin.SwitchToLegacyMode',
> menu='Help > Switch to Legacy Mode', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.display.interactive.SynchronizeWindows',
> menu='Analyze > Tools > Synchronize Windows',
> iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='org.scijava.plugins.commands.debug.SystemInformation', menu='Plugins
> > Debug > System Information', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.debug.TableDemo',
> menu='Plugins > Sandbox > Table Demo', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='org.scijava.plugins.commands.debug.TextDisplayTest',
> menu='Plugins > Sandbox > TextDisplayTest', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.updater.PromptUserToUpdate', label='There
> are updates available', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.display.interactive.Threshold',
> menu='Image > Adjust > Threshold...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='org.scijava.ui.swing.mdi.WindowsTileVertical',
> menu='Window > Tile Vertical', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomToSelection',
> menu='Image > Zoom > To Selection', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.TranslateImage',
> menu='Image > Transform > Translate...', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionTrimmedMean',
> menu='Process > Noise > Noise Reduction > Trimmed Mean', priority=0.0,
> enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.updater.CheckForUpdates',
> label='Up-to-date check', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.ui.swing.updater.ImageJUpdater',
> menu='Help > Update...', priority=0.0, enabled=true, pluginType=UpdaterUI
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.upload.SampleImageUploader', menu='Help
> > Upload Sample Image', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.zoom.Zoom100Percent',
> menu='Image > Zoom > View 100%', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.options.OptionsWandTool', menu='Edit >
> Options > Wand Tool...', priority=0.0, enabled=true,
> pluginType=OptionsPlugin
> >>> [DEBUG] - class='org.scijava.ui.swing.commands.WatchEvents',
> menu='Plugins > Debug > Watch Events', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsWest',
> menu='Process > Shadows > West', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.plugins.commands.assign.XorDataValuesWith', menu='Process
> > Math > XOR...', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomIn', label='Zoom
> In', menu='Image > Zoom > In', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomOut',
> label='Zoom Out', menu='Image > Zoom > Out', priority=0.0, enabled=true,
> pluginType=Command
> >>> [DEBUG] -
> class='net.imagej.ui.swing.script.TextEditor$BeanshellHighlighter',
> label='beanshell', priority=0.0, enabled=true, pluginType=SyntaxHighlighter
> >>> [DEBUG] -
> class='net.imagej.ui.swing.script.TextEditor$ECMAScriptHighlighter',
> label='ecmascript', priority=0.0, enabled=true, pluginType=SyntaxHighlighter
> >>> [DEBUG] -
> class='net.imagej.ui.swing.script.TextEditor$IJ1MacroHighlighter',
> label='ij1-macro', priority=0.0, enabled=true, pluginType=SyntaxHighlighter
> >>> [DEBUG] -
> class='net.imagej.ui.swing.script.TextEditor$MatlabHighlighter',
> label='matlab', priority=0.0, enabled=true, pluginType=SyntaxHighlighter
> >>> [DEBUG] - class='net.imagej.plugins.commands.app.EasterEgg', label='|
> It's a secret to everyone |', priority=0.0, enabled=true, pluginType=Command
> >>> [DEBUG] - class='io.scif.formats.APNGFormat', name='Animated PNG',
> priority=0.0, enabled=true, pluginType=Format
> >>> [DEBUG] - class='io.scif.img.converters.ArrayDataAccessConverter',
> name='ArrayDataAccess', priority=0.0, enabled=true,
> pluginType=PlaneConverter
> >>> [DEBUG] - class='io.scif.formats.AVIFormat', name='Audio Video
> Interleave', priority=0.0, enabled=true, pluginType=Format
> >>> [DEBUG] - class='net.imagej.plugins.tools.AxisPositionHandler',
> name='Axis Position Shortcuts', priority=0.0, enabled=true, pluginType=Tool
> >>> [DEBUG] -
> class='org.scijava.plugins.scripting.beanshell.BeanshellScriptLanguage',
> name='BeanShell', priority=0.0, enabled=true, pluginType=ScriptLanguage
> >>> [DEBUG] -
> class='org.scijava.plugins.scripting.clojure.ClojureScriptLanguage',
> name='Clojure', priority=0.0, enabled=true, pluginType=ScriptLanguage
> >>> [DEBUG] -
> class='net.imagej.autoscale.ConfidenceIntervalAutoscaleMethod',
> name='Confidence Interval', priority=0.0, enabled=true,
> pluginType=AutoscaleMethod
> >>> [DEBUG] - class='net.imagej.plugins.tools.ContextMenuHandler',
> name='Context Menus', priority=0.0, enabled=true, pluginType=Tool
> >>> [DEBUG] - class='io.scif.formats.DICOMFormat', name='DICOM',
> priority=0.0, enabled=true, pluginType=Format
> >>> [DEBUG] - class='net.imagej.autoscale.DefaultAutoscaleMethod',
> name='Default', priority=0.0, enabled=true, pluginType=AutoscaleMethod
> >>> [DEBUG] - class='net.imagej.threshold.DefaultThresholdMethod',
> name='Default', priority=0.0, enabled=true, pluginType=ThresholdMethod
> >>> [DEBUG] - class='io.scif.img.converters.RandomAccessConverter',
> name='Default', priority=0.0, enabled=true, pluginType=PlaneConverter
> >>> [DEBUG] - class='io.scif.formats.EPSFormat', name='Encapsulated
> PostScript', priority=0.0, enabled=true, pluginType=Format
> >>> [DEBUG] - class='io.scif.formats.FITSFormat', name='Flexible Image
> Transport System', priority=0.0, enabled=true, pluginType=Format
> >>> [DEBUG] - class='io.scif.formats.GIFFormat', name='Graphics
> Interchange Format', priority=0.0, enabled=true, pluginType=Format
> >>> [DEBUG] -
> class='org.scijava.plugins.scripting.groovy.GroovyScriptLanguage',
> name='Groovy', priority=0.0, enabled=true, pluginType=ScriptLanguage
> >>> [DEBUG] - class='net.imagej.threshold.HuangThresholdMethod',
> name='Huang', priority=0.0, enabled=true, pluginType=ThresholdMethod
> >>> [DEBUG] - class='net.imagej.legacy.plugin.IJ1MacroLanguage', name='IJ1
> Macro', priority=0.0, enabled=true, pluginType=ScriptLanguage
> >>> [DEBUG] - class='io.scif.formats.ICSFormat', name='Image Cytometry
> Standard', priority=0.0, enabled=true, pluginType=Format
> >>> [DEBUG] - class='net.imagej.legacy.LegacyImageJApp', name='ImageJ1',
> priority=0.0, enabled=true, pluginType=App
> >>> [DEBUG] - class='net.imagej.threshold.IntermodesThresholdMethod',
> name='Intermodes', priority=0.0, enabled=true, pluginType=ThresholdMethod
> >>> [DEBUG] - class='net.imagej.threshold.IsoDataThresholdMethod',
> name='IsoData', priority=0.0, enabled=true, pluginType=ThresholdMethod
> >>> [DEBUG] - class='io.scif.formats.JPEGFormat', name='JPEG',
> priority=0.0, enabled=true, pluginType=Format
> >>> [DEBUG] - class='io.scif.formats.JPEG2000Format', name='JPEG-2000',
> priority=0.0, enabled=true, pluginType=Format
> >>> [DEBUG] -
> class='org.scijava.plugins.scripting.java.JavaScriptLanguage', name='Java',
> priority=0.0, enabled=true, pluginType=ScriptLanguage
> >>> [DEBUG] - class='io.scif.formats.JavaFormat', name='Java source code',
> priority=0.0, enabled=true, pluginType=Format
> >>> [DEBUG] -
> class='org.scijava.plugins.scripting.javascript.JavaScriptScriptLanguage',
> name='JavaScript', priority=0.0, enabled=true, pluginType=ScriptLanguage
> >>> [DEBUG] - class='net.imagej.threshold.LiThresholdMethod', name='Li',
> priority=0.0, enabled=true, pluginType=ThresholdMethod
> >>> [DEBUG] - class='org.scijava.plugins.platforms.macosx.MacOSXPlatform',
> name='Mac OS X', priority=0.0, enabled=true, pluginType=Platform
> >>> [DEBUG] - class='net.imagej.threshold.MaxEntropyThresholdMethod',
> name='MaxEntropy', priority=0.0, enabled=true, pluginType=ThresholdMethod
> >>> [DEBUG] - class='net.imagej.threshold.MaxLikelihoodThresholdMethod',
> name='MaxLikelihood', priority=0.0, enabled=true, pluginType=ThresholdMethod
> >>> [DEBUG] - class='net.imagej.threshold.MeanThresholdMethod',
> name='Mean', priority=0.0, enabled=true, pluginType=ThresholdMethod
> >>> [DEBUG] - class='io.scif.formats.MicromanagerFormat',
> name='Micro-Manager', priority=0.0, enabled=true, pluginType=Format
> >>> [DEBUG] - class='net.imagej.threshold.MinErrorThresholdMethod',
> name='MinError(I)', priority=0.0, enabled=true, pluginType=ThresholdMethod
> >>> [DEBUG] - class='net.imagej.threshold.MinimumThresholdMethod',
> name='Minimum', priority=0.0, enabled=true, pluginType=ThresholdMethod
> >>> [DEBUG] - class='net.imagej.threshold.MomentsThresholdMethod',
> name='Moments', priority=0.0, enabled=true, pluginType=ThresholdMethod
> >>> [DEBUG] - class='io.scif.formats.MNGFormat', name='Multiple Network
> Graphics', priority=0.0, enabled=true, pluginType=Format
> >>> [DEBUG] - class='io.scif.formats.NRRDFormat', name='NRRD',
> priority=0.0, enabled=true, pluginType=Format
> >>> [DEBUG] - class='io.scif.formats.OBFFormat', name='OBF', priority=0.0,
> enabled=true, pluginType=Format
> >>> [DEBUG] - class='net.imagej.threshold.OtsuThresholdMethod',
> name='Otsu', priority=0.0, enabled=true, pluginType=ThresholdMethod
> >>> [DEBUG] - class='io.scif.formats.PCXFormat', name='PCX', priority=0.0,
> enabled=true, pluginType=Format
> >>> [DEBUG] - class='io.scif.formats.qt.PICTFormat', name='PICT',
> priority=0.0, enabled=true, pluginType=Format
> >>> [DEBUG] - class='net.imagej.plugins.tools.PanActivator', name='Pan
> Activator', priority=0.0, enabled=true, pluginType=Tool
> >>> [DEBUG] - class='net.imagej.threshold.PercentileThresholdMethod',
> name='Percentile', priority=0.0, enabled=true, pluginType=ThresholdMethod
> >>> [DEBUG] - class='io.scif.img.converters.PlanarAccessConverter',
> name='PlanarAccess', priority=0.0, enabled=true, pluginType=PlaneConverter
> >>> [DEBUG] - class='io.scif.formats.PGMFormat', name='Portable Gray Map',
> priority=0.0, enabled=true, pluginType=Format
> >>> [DEBUG] - class='net.imagej.plugins.tools.PixelProbe', name='Probe',
> priority=0.0, enabled=true, pluginType=Tool
> >>> [DEBUG] -
> class='org.scijava.plugins.scripting.jython.JythonScriptLanguage',
> name='Python', priority=0.0, enabled=true, pluginType=ScriptLanguage
> >>> [DEBUG] - class='io.scif.formats.qt.NativeQTFormat', name='QuickTime',
> priority=0.0, enabled=true, pluginType=Format
> >>> [DEBUG] - class='net.imagej.threshold.RenyiEntropyThresholdMethod',
> name='RenyiEntropy', priority=0.0, enabled=true, pluginType=ThresholdMethod
> >>> [DEBUG] -
> class='org.scijava.plugins.scripting.jruby.JRubyScriptLanguage',
> name='Ruby', priority=0.0, enabled=true, pluginType=ScriptLanguage
> >>> [DEBUG] - class='io.scif.app.SCIFIOApp', name='SCIFIO', priority=0.0,
> enabled=true, pluginType=App
> >>> [DEBUG] - class='net.imagej.threshold.ShanbhagThresholdMethod',
> name='Shanbhag', priority=0.0, enabled=true, pluginType=ThresholdMethod
> >>> [DEBUG] - class='io.scif.formats.FakeFormat', name='Simulated data',
> priority=0.0, enabled=true, pluginType=Format
> >>> [DEBUG] - class='io.scif.formats.TextFormat', name='Text',
> priority=0.0, enabled=true, pluginType=Format
> >>> [DEBUG] - class='net.imagej.threshold.TriangleThresholdMethod',
> name='Triangle', priority=0.0, enabled=true, pluginType=ThresholdMethod
> >>> [DEBUG] - class='net.imagej.plugins.tools.FocusHandler', name='Window
> Focus', priority=0.0, enabled=true, pluginType=Tool
> >>> [DEBUG] -
> class='org.scijava.plugins.platforms.windows.WindowsPlatform',
> name='Windows', priority=0.0, enabled=true, pluginType=Platform
> >>> [DEBUG] - class='io.scif.formats.BMPFormat', name='Windows Bitmap',
> priority=0.0, enabled=true, pluginType=Format
> >>> [DEBUG] - class='net.imagej.threshold.YenThresholdMethod', name='Yen',
> priority=0.0, enabled=true, pluginType=ThresholdMethod
> >>> [DEBUG] - class='io.scif.formats.ZipFormat', name='Zip', priority=0.0,
> enabled=true, pluginType=Format
> >>> [DEBUG] - class='net.imagej.plugins.tools.ZoomHandler', name='Zoom
> Shortcuts', priority=0.0, enabled=true, pluginType=Tool
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealAbs',
> name='abs', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.arithmetic.add.AddConstantToImageInPlace',
> name='add', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.arithmetic.add.AddRandomAccessibleIntervalToIterableInterval',
> name='add', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.arithmetic.add.AddConstantToPlanarDoubleImage',
> name='add', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealAddConstant',
> name='addconstant', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealAddNoise',
> name='addnoise', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealAndConstant',
> name='andconstant', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccos',
> name='arccos', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealArccosh',
> name='arccosh', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccot',
> name='arccot', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealArccoth',
> name='arccoth', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccsc',
> name='arccsc', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealArccsch',
> name='arccsch', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArcsec',
> name='arcsec', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealArcsech',
> name='arcsech', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArcsin',
> name='arcsin', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealArcsinh',
> name='arcsinh', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArctan',
> name='arctan', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealArctanh',
> name='arctanh', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.ascii.DefaultASCII', name='ascii',
> priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCeil',
> name='ceil', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.chunker.DefaultChunker',
> name='chunker', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealConstant',
> name='constant', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.convert.ConvertPixClip',
> name='convert', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.convert.ConvertII', name='convert',
> priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.convert.ConvertPixNormalizeScale',
> name='convert', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.convert.ConvertPixScale',
> name='convert', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.convert.ConvertPixCopy',
> name='convert', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.convolve.ConvolveNaive',
> name='convolve', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.convolve.ConvolveFourier',
> name='convolve', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCopy',
> name='copy', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCos',
> name='cos', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCosh',
> name='cosh', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCot',
> name='cot', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCoth',
> name='coth', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.create.CreateArrayImg', name='create',
> priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCsc',
> name='csc', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCsch',
> name='csch', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealCubeRoot',
> name='cuberoot', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealDivideConstant',
> name='divideconstant', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.equation.DefaultEquation',
> name='equation', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealExp',
> name='exp', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealExpMinusOne',
> name='expminusone', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealFloor',
> name='floor', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealGammaConstant',
> name='gammaconstant', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.gauss.GaussRAI2RAI', name='gauss',
> priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealGaussianRandom',
> name='gaussianrandom', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.identity.DefaultIdentity',
> name='identity', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealInvert',
> name='invert', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinInplaceAndInplace',
> name='join', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinInplaceAndFunction',
> name='join', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinFunctionAndFunction',
> name='join', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinInplaceFunctions',
> name='join', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinFunctionAndInplace',
> name='join', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinFunctions',
> name='join', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealLog',
> name='log', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealLog10',
> name='log10', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealLog2',
> name='log2', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealLogOnePlusX',
> name='logoneplusx', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.lookup.DefaultLookup', name='lookup',
> aliases='op', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.loop.DefaultLoopInplace', name='loop',
> priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.loop.DefaultLoopFunction',
> name='loop', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.threshold.Manual',
> name='manualthreshold', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.map.MapRA2View', name='map',
> priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.map.MapRAI2View', name='map',
> priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.map.MapII2View', name='map',
> priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealMaxConstant',
> name='maxconstant', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealMinConstant',
> name='minconstant', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.misc.MinMaxRealType', name='minmax',
> priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.statistics.moments.Moment2AboutMean',
> name='moment1aboutmean', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.statistics.moments.Moment1AboutMean',
> name='moment1aboutmean', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealMultiplyConstant',
> name='multiplyconstant', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealNearestInt',
> name='nearestint', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealNegate',
> name='negate', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.normalize.NormalizeRealType',
> name='normalize', aliases='norm', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.normalize.NormalizeII',
> name='normalize', aliases='norm', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealOrConstant',
> name='orconstant', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.threshold.Otsu', name='otsu',
> priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealPowerConstant',
> name='powerconstant', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealReciprocal',
> name='reciprocal', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealRound',
> name='round', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.scale.ScaleImg', name='scale',
> aliases='norm', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSec',
> name='sec', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSech',
> name='sech', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSignum',
> name='signum', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSin',
> name='sin', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSinc',
> name='sinc', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSincPi',
> name='sincpi', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSinh',
> name='sinh', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSqr',
> name='sqr', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSqrt',
> name='sqrt', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealStep',
> name='step', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealSubtractConstant',
> name='subtractconstant', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='org.scijava.ui.swing.sdi.SwingSDIUI', name='swing',
> priority=0.0, enabled=true, pluginType=UserInterface
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealTan',
> name='tan', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealTanh',
> name='tanh', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.threshold.PixThreshold',
> name='threshold', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.threshold.GlobalThreshold',
> name='threshold', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.threshold.LocalThreshold',
> name='threshold', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealUlp',
> name='ulp', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealUniformRandom',
> name='uniformrandom', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] -
> class='net.imagej.ops.generated.arithmetic.real.RealXorConstant',
> name='xorconstant', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealZero',
> name='zero', priority=0.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='fiji.plugin.trackmate.tracking.ManualTrackerFactory',
> priority=-1.0, enabled=true, pluginType=SpotTrackerFactory
> >>> [DEBUG] - class='net.imagej.ops.map.ParallelMap', name='map',
> priority=-95.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.map.ParallelMapI2I', name='map',
> priority=-97.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.map.ParallelMapI2R', name='map',
> priority=-98.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.crop.CropImgPlus', name='crop',
> aliases='slice', priority=-99.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.crop.CropLabeling', name='crop',
> aliases='slice', priority=-99.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.map.MapII2II', name='map',
> priority=-99.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.project.parallel.DefaultProjectP',
> name='project', priority=-99.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.statistics.StdDevRealTypeDirect',
> name='stddev', priority=-99.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.statistics.VarianceRealTypeDirect',
> name='variance', priority=-99.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='org.scijava.ui.dnd.FileDragAndDropHandler',
> priority=-100.0, enabled=true, pluginType=DragAndDropHandler
> >>> [DEBUG] - class='org.scijava.display.DefaultTextDisplay',
> priority=-100.0, enabled=true, pluginType=Display
> >>> [DEBUG] - class='org.scijava.log.StderrLogService', priority=-100.0,
> enabled=true, pluginType=Service
> >>> [DEBUG] - class='org.scijava.platform.DefaultAppEventService',
> priority=-100.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.display.DummyScreenCaptureService',
> priority=-100.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.render.DummyRenderingService',
> priority=-100.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='net.imagej.io.DatasetIOPlugin', priority=-100.0,
> enabled=true, pluginType=IOPlugin
> >>> [DEBUG] - class='io.scif.formats.APNGFormat$APNGTranslator',
> priority=-100.0, enabled=true, pluginType=Translator
> >>> [DEBUG] -
> class='io.scif.formats.qt.NativeQTFormat$NativeQTTranslator',
> priority=-100.0, enabled=true, pluginType=Translator
> >>> [DEBUG] - class='io.scif.formats.FakeFormat$FakeTranslator',
> priority=-100.0, enabled=true, pluginType=Translator
> >>> [DEBUG] -
> class='io.scif.formats.MicromanagerFormat$MicromanagerTranslator',
> priority=-100.0, enabled=true, pluginType=Translator
> >>> [DEBUG] - class='io.scif.services.DefaultInitializeService',
> priority=-100.0, enabled=true, pluginType=Service
> >>> [DEBUG] - class='io.scif.formats.AVIFormat$Translator',
> priority=-100.0, enabled=true, pluginType=Translator
> >>> [DEBUG] - class='io.scif.formats.ICSFormat$ICSTranslator',
> priority=-100.0, enabled=true, pluginType=Translator
> >>> [DEBUG] - class='io.scif.formats.EPSFormat$EPSTranslator',
> priority=-100.0, enabled=true, pluginType=Translator
> >>> [DEBUG] - class='io.scif.formats.ImageIOFormat$ImageIOTranslator',
> priority=-100.0, enabled=true, pluginType=Translator
> >>> [DEBUG] -
> class='io.scif.formats.qt.LegacyQTFormat$LegacyQTTranslator',
> priority=-100.0, enabled=true, pluginType=Translator
> >>> [DEBUG] - class='net.imagej.legacy.plugin.DefaultLegacyOpener',
> priority=-100.0, enabled=true, pluginType=LegacyOpener
> >>> [DEBUG] - class='net.imagej.legacy.plugin.DefaultLegacyEditor',
> priority=-100.0, enabled=true, pluginType=LegacyEditor
> >>> [DEBUG] - class='org.scijava.plugins.scripting.java.MainJavaRunner',
> priority=-100.0, enabled=true, pluginType=JavaRunner
> >>> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat$OMEXMLTranslator',
> priority=-100.0, enabled=true, pluginType=Translator
> >>> [DEBUG] - class='io.scif.formats.qt.LegacyQTFormat', name='QuickTime',
> priority=-100.0, enabled=true, pluginType=Format
> >>> [DEBUG] - class='org.scijava.app.SciJavaApp', name='SciJava',
> priority=-100.0, enabled=true, pluginType=App
> >>> [DEBUG] - class='io.scif.formats.JPEGTileFormat', name='Tile JPEG',
> priority=-100.0, enabled=true, pluginType=Format
> >>> [DEBUG] -
> class='net.imagej.ops.arithmetic.add.AddConstantToNumericType', name='add',
> priority=-100.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='org.scijava.ui.awt.AWTUI', name='awt',
> priority=-100.0, enabled=true, pluginType=UserInterface
> >>> [DEBUG] - class='net.imagej.ops.crop.CropRAI', name='crop',
> aliases='slice', priority=-100.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.map.MapII2RAI', name='map',
> priority=-100.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.map.MapRAI2III', name='map',
> priority=-100.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.map.MapI', name='map',
> priority=-100.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.neighborhood.MapNeighborhood',
> name='map', priority=-100.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.statistics.MaxRealType', name='max',
> priority=-100.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.statistics.MeanRealType', name='mean',
> priority=-100.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.statistics.MedianRealType',
> name='median', priority=-100.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.statistics.MinRealType', name='min',
> priority=-100.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.project.ProjectRAI2II',
> name='project', priority=-100.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.misc.SizeIterableInterval',
> name='size', priority=-100.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.statistics.StdDevRealType',
> name='stddev', priority=-100.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.statistics.SumRealType', name='sum',
> priority=-100.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='org.scijava.ui.swing.mdi.SwingMdiUI',
> name='swing-mdi', priority=-100.0, enabled=true, pluginType=UserInterface
> >>> [DEBUG] - class='net.imagej.ops.statistics.VarianceRealType',
> name='variance', priority=-100.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='org.scijava.text.io.TextIOPlugin', priority=-101.0,
> enabled=true, pluginType=IOPlugin
> >>> [DEBUG] - class='net.imagej.ops.map.MapI2I', name='map',
> priority=-101.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.plugins.tools.WandTool', name='Wand',
> description='Wand (tracing) tool', iconPath='/icons/tools/wand.png',
> priority=-110.0, enabled=false, pluginType=Tool
> >>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingTextTool',
> name='Text', description='Text tool', iconPath='/icons/tools/text.png',
> priority=-115.0, enabled=false, pluginType=Tool
> >>> [DEBUG] - class='net.imagej.plugins.tools.ZoomTool', name='Zoom',
> description='Magnifying glass (or use "+" and "-" keys)',
> iconPath='/icons/tools/zoom.png', priority=-200.0, enabled=true,
> pluginType=Tool
> >>> [DEBUG] - class='net.imagej.plugins.tools.PanTool', name='Pan',
> description='Scrolling tool (or press space bar and drag)',
> iconPath='/icons/tools/pan.png', priority=-201.0, enabled=true,
> pluginType=Tool
> >>> [DEBUG] - class='net.imagej.plugins.tools.PaintBrushTool',
> name='Paintbrush', description='Paintbrush Tool',
> iconPath='/icons/tools/paintbrush.png', priority=-300.0, enabled=true,
> pluginType=Tool
> >>> [DEBUG] - class='net.imagej.plugins.tools.PencilTool', name='Pencil',
> description='Pencil Tool', iconPath='/icons/tools/pencil.png',
> priority=-301.0, enabled=true, pluginType=Tool
> >>> [DEBUG] - class='net.imagej.plugins.tools.SprayCanTool',
> name='SprayCan', label='Spray Can', description='Spray Can Tool',
> iconPath='/icons/tools/spray-can.png', priority=-303.0, enabled=true,
> pluginType=Tool
> >>> [DEBUG] - class='net.imagej.plugins.tools.FloodFillTool',
> name='FloodFill', label='Flood Fill', description='Flood Fill Tool',
> iconPath='/icons/tools/flood-fill.png', priority=-304.0, enabled=true,
> pluginType=Tool
> >>> [DEBUG] - class='net.imagej.plugins.tools.ArrowTool', name='Arrow',
> description='Arrow Tool', iconPath='/icons/tools/arrow.png',
> priority=-305.0, enabled=false, pluginType=Tool
> >>> [DEBUG] - class='net.imagej.plugins.tools.FgColorTool',
> name='Foreground', iconPath='/icons/tools/blank.png', priority=-500.0,
> enabled=true, pluginType=Tool
> >>> [DEBUG] - class='net.imagej.plugins.tools.BgColorTool',
> name='Background', iconPath='/icons/tools/blankBlack.png', priority=-501.0,
> enabled=true, pluginType=Tool
> >>> [DEBUG] - class='io.scif.ome.formats.OMETIFFFormat', priority=-9998.0,
> enabled=true, pluginType=Format
> >>> [DEBUG] - class='io.scif.ome.formats.OMETIFFFormat$OMETIFFTranslator',
> priority=-9998.0, enabled=true, pluginType=Translator
> >>> [DEBUG] - class='org.scijava.module.process.LoadInputsPreprocessor',
> priority=-9999.0, enabled=true, pluginType=PreprocessorPlugin
> >>> [DEBUG] - class='io.scif.formats.TIFFFormat$TIFFTranslator',
> priority=-9999.0, enabled=true, pluginType=Translator
> >>> [DEBUG] - class='io.scif.formats.TIFFFormat', name='Tagged Image File
> Format', priority=-9999.0, enabled=true, pluginType=Format
> >>> [DEBUG] - class='org.scijava.ui.FilePreprocessor', priority=-9999.5,
> enabled=true, pluginType=PreprocessorPlugin
> >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTInputHarvester',
> priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin
> >>> [DEBUG] - class='org.scijava.plugins.text.plain.PlainTextFormat',
> priority=-10000.0, enabled=true, pluginType=TextFormat
> >>> [DEBUG] - class='org.scijava.display.DisplayPostprocessor',
> priority=-10000.0, enabled=true, pluginType=PostprocessorPlugin
> >>> [DEBUG] - class='io.scif.DefaultTranslator', priority=-10000.0,
> enabled=true, pluginType=Translator
> >>> [DEBUG] - class='net.imagej.legacy.ui.LegacyInputHarvester',
> priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin
> >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingInputHarvester',
> priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin
> >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingMdiInputHarvester',
> priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin
> >>> [DEBUG] - class='net.imagej.ui.swing.overlay.DefaultJHotDrawAdapter',
> priority=-10000.0, enabled=true, pluginType=JHotDrawAdapter
> >>> [DEBUG] - class='org.scijava.platform.DefaultPlatform',
> name='Default', priority=-10000.0, enabled=true, pluginType=Platform
> >>> [DEBUG] - class='net.imagej.plugins.tools.AcceleratorHandler',
> name='Keyboard Shortcuts', priority=-10000.0, enabled=true, pluginType=Tool
> >>> [DEBUG] - class='io.scif.formats.MinimalTIFFFormat', name='Minimal
> TIFF', priority=-10000.0, enabled=true, pluginType=Format
> >>> [DEBUG] -
> class='net.imagej.ops.arithmetic.add.AddConstantToImageFunctional',
> name='add', priority=-10000.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='net.imagej.ops.chunker.InterleavedChunker',
> name='chunker', priority=-10000.0, enabled=true, pluginType=Op
> >>> [DEBUG] - class='org.scijava.module.process.CheckInputsPreprocessor',
> priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin
> >>> [DEBUG] - class='org.scijava.module.process.SaveInputsPreprocessor',
> priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin
> >>> [DEBUG] - class='io.scif.formats.TIFFJAIFormat', name='Tagged Image
> File Format', priority=-10001.0, enabled=true, pluginType=Format
> >>> [DEBUG] - class='net.imagej.ops.misc.SizeIterable', name='size',
> priority=-Infinity, enabled=true, pluginType=Op
> >>> [DEBUG] Created service 'org.scijava.plugin.DefaultPluginService' in
> 51 ms
> >>> [DEBUG] Creating service: org.scijava.object.DefaultObjectService
> >>> log4j:WARN No appenders could be found for logger
> (org.bushe.swing.event.EventService).
> >>> log4j:WARN Please initialize the log4j system properly.
> >>> log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig
> for more info.
> >>> [DEBUG] Created service 'org.scijava.object.DefaultObjectService' in
> 72 ms
> >>> [DEBUG] Creating service: org.scijava.module.DefaultModuleService
> >>> [DEBUG] Creating service: org.scijava.prefs.DefaultPrefService
> >>> [DEBUG] Created service 'org.scijava.prefs.DefaultPrefService' in 4 ms
> >>> [DEBUG] Creating service: org.scijava.convert.DefaultConvertService
> >>> [DEBUG] Created service 'org.scijava.convert.DefaultConvertService' in
> 4 ms
> >>> [DEBUG] Created service 'org.scijava.module.DefaultModuleService' in
> 14 ms
> >>> [DEBUG] Creating service: org.scijava.command.DefaultCommandService
> >>> [DEBUG] Created service 'org.scijava.command.DefaultCommandService' in
> 36 ms
> >>> [DEBUG] Created service 'org.scijava.script.DefaultScriptService' in
> 184 ms
> >>> [DEBUG] Creating service: net.imagej.lut.DefaultLUTService
> >>> [DEBUG] Creating service: net.imagej.DefaultDatasetService
> >>> [DEBUG] Creating service: io.scif.services.DefaultFormatService
> >>> [DEBUG] Created service 'io.scif.services.DefaultFormatService' in 3 ms
> >>> [DEBUG] Creating service: net.imagej.types.DefaultDataTypeService
> >>> [INFO] Found 11 DataType plugins.
> >>> [DEBUG] Created service 'net.imagej.types.DefaultDataTypeService' in
> 40 ms
> >>> [DEBUG] Created service 'net.imagej.DefaultDatasetService' in 61 ms
> >>> [DEBUG] Creating service: org.scijava.display.DefaultDisplayService
> >>> [DEBUG] Created service 'org.scijava.display.DefaultDisplayService' in
> 5 ms
> >>> [DEBUG] Creating service: net.imagej.display.DefaultImageDisplayService
> >>> [DEBUG] Created service
> 'net.imagej.display.DefaultImageDisplayService' in 3 ms
> >>> [DEBUG] Created service 'net.imagej.lut.DefaultLUTService' in 74 ms
> >>> [DEBUG] Creating service: net.imagej.legacy.DefaultLegacyService
> >>> [DEBUG] Creating service: net.imagej.display.DefaultOverlayService
> >>> [DEBUG] Creating service: org.scijava.options.DefaultOptionsService
> >>> [DEBUG] Created service 'org.scijava.options.DefaultOptionsService' in
> 2 ms
> >>> [DEBUG] Creating service: net.imagej.ui.awt.AWTRenderingService
> >>> [DEBUG] Created service 'net.imagej.ui.awt.AWTRenderingService' in 1 ms
> >>> [DEBUG] Created service 'net.imagej.display.DefaultOverlayService' in
> 10 ms
> >>> [DEBUG] Creating service: net.imagej.threshold.DefaultThresholdService
> >>> [DEBUG] Created service 'net.imagej.threshold.DefaultThresholdService'
> in 4 ms
> >>> [DEBUG] Creating service: org.scijava.menu.DefaultMenuService
> >>> [DEBUG] Created service 'org.scijava.menu.DefaultMenuService' in 3 ms
> >>> [DEBUG] Creating service: org.scijava.app.DefaultStatusService
> >>> [DEBUG] Creating service: org.scijava.app.DefaultAppService
> >>> [DEBUG] Created service 'org.scijava.app.DefaultAppService' in 4 ms
> >>> [DEBUG] Created service 'org.scijava.app.DefaultStatusService' in 5 ms
> >>> [INFO] Found 8 ScriptLanguage plugins.
> >>> [INFO] Found 0 scripts
> >>> [INFO] Overriding Upload Sample Image; identifier:
> command:net.imagej.plugins.commands.upload.SampleImageUploader; jar:
> file:/opt/Fiji.app/jars/imagej-plugins-commands-0.2.6.jar
> >>> [INFO] Overriding Test FlowCam; identifier:
> script:/opt/Fiji.app/plugins/FlowCam/Test_FlowCam.ijm; jar:
> file:/opt/Fiji.app/jars/scijava-common-2.33.0.jar
> >>> [DEBUG] Created service 'net.imagej.legacy.DefaultLegacyService' in
> 685 ms
> >>> [DEBUG] Creating service: fiji.DefaultFijiService
> >>> [DEBUG] Created service 'fiji.DefaultFijiService' in 1 ms
> >>> [DEBUG] Creating service: net.imglib2.meta.units.DefaultUnitService
> >>> [DEBUG] Created service 'net.imglib2.meta.units.DefaultUnitService' in
> 44 ms
> >>> [DEBUG] Creating service: net.imagej.ui.awt.AWTScreenCaptureService
> >>> [DEBUG] Created service 'net.imagej.ui.awt.AWTScreenCaptureService' in
> 2 ms
> >>> [DEBUG] Creating service: org.scijava.input.DefaultInputService
> >>> [DEBUG] Created service 'org.scijava.input.DefaultInputService' in 6 ms
> >>> [DEBUG] Creating service: org.scijava.ui.DefaultUIService
> >>> [DEBUG] Creating service: org.scijava.platform.DefaultPlatformService
> >>> [DEBUG] Creating service: org.scijava.platform.DefaultAppEventService
> >>> [DEBUG] Created service 'org.scijava.platform.DefaultAppEventService'
> in 2 ms
> >>> [INFO] Found 1 Platform plugins.
> >>> [DEBUG] Configuring platform: org.scijava.platform.DefaultPlatform
> >>> [DEBUG] Created service 'org.scijava.platform.DefaultPlatformService'
> in 11 ms
> >>> [DEBUG] Creating service: org.scijava.tool.DefaultToolService
> >>> [DEBUG] Created service 'org.scijava.tool.DefaultToolService' in 5 ms
> >>> [DEBUG] Created service 'org.scijava.ui.DefaultUIService' in 23 ms
> >>> [DEBUG] Creating service: org.scijava.ui.dnd.DefaultDragAndDropService
> >>> [DEBUG] Created service 'org.scijava.ui.dnd.DefaultDragAndDropService'
> in 5 ms
> >>> [DEBUG] Creating service: org.scijava.text.DefaultTextService
> >>> [DEBUG] Created service 'org.scijava.text.DefaultTextService' in 3 ms
> >>> [DEBUG] Creating service: org.scijava.io.DefaultRecentFileService
> >>> [DEBUG] Created service 'org.scijava.io.DefaultRecentFileService' in
> 61 ms
> >>> [DEBUG] Creating service: org.scijava.io.DefaultIOService
> >>> [DEBUG] Created service 'org.scijava.io.DefaultIOService' in 4 ms
> >>> [DEBUG] Creating service: org.scijava.widget.DefaultWidgetService
> >>> [INFO] Found 22 InputWidget plugins.
> >>> [DEBUG] Created service 'org.scijava.widget.DefaultWidgetService' in 6
> ms
> >>> [DEBUG] Creating service: org.scijava.welcome.DefaultWelcomeService
> >>> [DEBUG] Created service 'org.scijava.welcome.DefaultWelcomeService' in
> 2 ms
> >>> [DEBUG] Creating service: org.scijava.script.DefaultScriptHeaderService
> >>> [DEBUG] Created service
> 'org.scijava.script.DefaultScriptHeaderService' in 2 ms
> >>> [DEBUG] Creating service: org.scijava.event.DefaultEventHistory
> >>> [DEBUG] Created service 'org.scijava.event.DefaultEventHistory' in 2 ms
> >>> [DEBUG] Creating service: org.scijava.console.DefaultConsoleService
> >>> [DEBUG] Created service 'org.scijava.console.DefaultConsoleService' in
> 2 ms
> >>> [DEBUG] Creating service: net.imagej.operator.DefaultCalculatorService
> >>> [DEBUG] Created service 'net.imagej.operator.DefaultCalculatorService'
> in 2 ms
> >>> [DEBUG] Creating service: net.imagej.autoscale.DefaultAutoscaleService
> >>> [DEBUG] Created service 'net.imagej.autoscale.DefaultAutoscaleService'
> in 3 ms
> >>> [DEBUG] Creating service: net.imagej.sampler.DefaultSamplerService
> >>> [DEBUG] Created service 'net.imagej.sampler.DefaultSamplerService' in
> 3 ms
> >>> [DEBUG] Creating service: net.imagej.display.DefaultZoomService
> >>> [DEBUG] Created service 'net.imagej.display.DefaultZoomService' in 2 ms
> >>> [DEBUG] Creating service: net.imagej.display.DefaultWindowService
> >>> [DEBUG] Created service 'net.imagej.display.DefaultWindowService' in 2
> ms
> >>> [DEBUG] Creating service: net.imagej.DefaultImgPlusService
> >>> [DEBUG] Created service 'net.imagej.DefaultImgPlusService' in 1 ms
> >>> [DEBUG] Creating service: net.imagej.ui.DefaultImageJUIService
> >>> [DEBUG] Created service 'net.imagej.ui.DefaultImageJUIService' in 1 ms
> >>> [DEBUG] Creating service: net.imagej.measure.DefaultStatisticsService
> >>> [DEBUG] Created service 'net.imagej.measure.DefaultStatisticsService'
> in 3 ms
> >>> [DEBUG] Creating service: net.imagej.measure.DefaultMeasurementService
> >>> [DEBUG] Created service 'net.imagej.measure.DefaultMeasurementService'
> in 1 ms
> >>> [DEBUG] Creating service: net.imagej.animation.DefaultAnimationService
> >>> [DEBUG] Created service 'net.imagej.animation.DefaultAnimationService'
> in 4 ms
> >>> [DEBUG] Creating service: io.scif.io.DefaultNIOService
> >>> [DEBUG] Created service 'io.scif.io.DefaultNIOService' in 2 ms
> >>> [DEBUG] Creating service:
> io.scif.img.converters.DefaultPlaneConverterService
> >>> [DEBUG] Created service
> 'io.scif.img.converters.DefaultPlaneConverterService' in 6 ms
> >>> [DEBUG] Creating service: io.scif.img.DefaultImgUtilityService
> >>> [DEBUG] Created service 'io.scif.img.DefaultImgUtilityService' in 5 ms
> >>> [DEBUG] Creating service: io.scif.gui.DefaultGUIService
> >>> [DEBUG] Created service 'io.scif.gui.DefaultGUIService' in 3 ms
> >>> [DEBUG] Creating service: io.scif.xml.DefaultXMLService
> >>> [DEBUG] Created service 'io.scif.xml.DefaultXMLService' in 22 ms
> >>> [DEBUG] Creating service: io.scif.refs.DefaultRefManagerService
> >>> [DEBUG] Created service 'io.scif.refs.DefaultRefManagerService' in 1 ms
> >>> [DEBUG] Creating service: io.scif.services.DefaultTranslatorService
> >>> [DEBUG] Created service 'io.scif.services.DefaultTranslatorService' in
> 2 ms
> >>> [DEBUG] Creating service: io.scif.codec.DefaultCodecService
> >>> [DEBUG] Created service 'io.scif.codec.DefaultCodecService' in 1 ms
> >>> [DEBUG] Creating service: io.scif.img.cell.cache.MapDBCache
> >>> [DEBUG] Created service 'io.scif.img.cell.cache.MapDBCache' in 8 ms
> >>> [DEBUG] Creating service: io.scif.DefaultMetadataService
> >>> [DEBUG] Created service 'io.scif.DefaultMetadataService' in 0 ms
> >>> [DEBUG] Creating service: io.scif.services.DefaultFilePatternService
> >>> [DEBUG] Created service 'io.scif.services.DefaultFilePatternService'
> in 2 ms
> >>> [DEBUG] Creating service: io.scif.formats.tiff.DefaultTiffService
> >>> [DEBUG] Created service 'io.scif.formats.tiff.DefaultTiffService' in 3
> ms
> >>> [DEBUG] Creating service: io.scif.services.DefaultLocationService
> >>> [DEBUG] Created service 'io.scif.services.DefaultLocationService' in 1
> ms
> >>> [DEBUG] Creating service: io.scif.services.JAIIIOServiceImpl
> >>> [DEBUG] Created service 'io.scif.services.JAIIIOServiceImpl' in 24 ms
> >>> [DEBUG] Creating service: io.scif.formats.qt.DefaultQTJavaService
> >>> [DEBUG] Created service 'io.scif.formats.qt.DefaultQTJavaService' in 5
> ms
> >>> [DEBUG] Creating service: org.scijava.ui.swing.SwingIconService
> >>> [DEBUG] Created service 'org.scijava.ui.swing.SwingIconService' in 3 ms
> >>> [DEBUG] Creating service:
> org.scijava.plugins.scripting.java.DefaultJavaService
> >>> [DEBUG] Created service
> 'org.scijava.plugins.scripting.java.DefaultJavaService' in 2 ms
> >>> [DEBUG] Creating service: net.imagej.ui.swing.overlay.JHotDrawService
> >>> [DEBUG] Created service 'net.imagej.ui.swing.overlay.JHotDrawService'
> in 3 ms
> >>> [DEBUG] Creating service: net.imagej.updater.DefaultUpdateService
> >>> [DEBUG] Created service 'net.imagej.updater.DefaultUpdateService' in 7
> ms
> >>> [DEBUG] Creating service: net.imagej.updater.DefaultUploaderService
> >>> [DEBUG] Created service 'net.imagej.updater.DefaultUploaderService' in
> 1 ms
> >>> [DEBUG] Creating service: net.imagej.ops.DefaultOpService
> >>> [DEBUG] Creating service: net.imagej.ops.DefaultOpMatchingService
> >>> [DEBUG] Created service 'net.imagej.ops.DefaultOpMatchingService' in 2
> ms
> >>> [DEBUG] Created service 'net.imagej.ops.DefaultOpService' in 5 ms
> >>> [DEBUG] Creating service:
> net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor
> >>> [DEBUG] Created service
> 'net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor' in 1
> ms
> >>> [DEBUG] Creating service: io.scif.ome.services.DefaultOMEXMLService
> >>> [DEBUG] Created service 'io.scif.ome.services.DefaultOMEXMLService' in
> 30 ms
> >>> [DEBUG] Creating service:
> io.scif.ome.services.DefaultOMEMetadataService
> >>> [DEBUG] Created service
> 'io.scif.ome.services.DefaultOMEMetadataService' in 11 ms
> >>> [DEBUG] Creating service: net.imagej.display.DummyScreenCaptureService
> >>> [DEBUG] Created service 'net.imagej.display.DummyScreenCaptureService'
> in 0 ms
> >>> [DEBUG] Creating service: net.imagej.render.DummyRenderingService
> >>> [DEBUG] Created service 'net.imagej.render.DummyRenderingService' in 1
> ms
> >>> [DEBUG] Creating service: io.scif.services.DefaultInitializeService
> >>> [DEBUG] Created service 'io.scif.services.DefaultInitializeService' in
> 3 ms
> >>> [DEBUG] Received command line arguments:
> >>> [DEBUG] publish(
> >>>     context = org.scijava.Context@7c92eb86
> >>>     consumed = false,null,null), called from non-EDT Thread:null
> >>> [DEBUG]     -port7
> >>> [DEBUG]     -macro
> >>> [DEBUG]     /home/btupper/hello.ijm
> >>> [DEBUG]     -batch
> >>> [INFO] Found 11 ConsoleArgument plugins.
> >>> [ERROR] Skipping unsupported option -port7
> >>> [DEBUG] publish(
> >>>     context = org.scijava.Context@7c92eb86
> >>>     consumed = false,null,null), called from non-EDT Thread:null
> >>> [INFO] Discovered user interface: net.imagej.legacy.ui.LegacyUI
> >>> [INFO] Discovered user interface: org.scijava.ui.swing.sdi.SwingSDIUI
> >>> [INFO] Discovered user interface: org.scijava.ui.awt.AWTUI
> >>> [INFO] Discovered user interface: org.scijava.ui.swing.mdi.SwingMdiUI
> >>> [btupper@fcm-flow ~]$
> >>
> >> --
> >> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
> >
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

--
ImageJ mailing list: http://imagej.nih.gov/ij/list.html
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Re: Warning/Error using Fiji on linux

BenTupper
Hi,

Thanks for the info.  I'll shall forge ahead.

Cheers,
Ben

On Dec 17, 2014, at 2:05 PM, Mark Hiner <[hidden email]> wrote:

> Hi Ben,
>
> Some additional information on these messages:
>
>> log4j:WARN No appenders could be found for logger
> (org.bushe.swing.event.EventService).
>
> These log4j warnings come up because, although there is a log4j.jar, there
> is no log4j.properties shipped with Fiji by default right now. We have
> decided to fix that by creating a new SciJava-config component
> <https://github.com/scijava/scijava-config> to bundle configuration files
> e.g. for log4j - so eventually these warnings will go away. To my
> knowledge, the warnings just indicate that you won't see log statements
> emitted by the EventService class in particular.
>
>> [ERROR] Skipping unsupported option -port7
>
> There is an issue open <https://github.com/imagej/imagej/issues/98>
> tracking this error. It should only be an actual problem if you will rely
> on the SingleInstanceListener functionality, restricting Fiji to one
> instance open at a time - otherwise I don't think it will affect you. If it
> does become a problem though, adding your feedback to that issue would be
> very helpful!
>
> Best,
> Mark
>
> On Tue, Dec 16, 2014 at 9:05 PM, Ben Tupper <[hidden email]> wrote:
>
>> On Dec 16, 2014, at 9:43 PM, Ben Tupper <[hidden email]> wrote:
>>
>>>
>>> On Dec 16, 2014, at 7:19 PM, Rasband, Wayne (NIH/NIMH) [E] <
>> [hidden email]> wrote:
>>>
>>>> On Dec 16, 2014, at 3:11 PM, Ben Tupper <[hidden email]> wrote:
>>>>>
>>>>> Hello,
>>>>>
>>>>> I'm learning to use Fiji in a headless CentOS 6 environment.  I first
>> updated fiji using...
>>>>>
>>>>> $ fiji --update update
>>>>>
>>>>>
>>>>> I have a simple macro, '~/hello.ijm', adapted from this one...
>> http://rsb.info.nih.gov/ij/macros/SaveTextFileDemo.txt
>>>>>
>>>>> //
>>>>> //START ~/hello.ijm
>>>>> //
>>>>> f = File.open("/home/btupper/hello.txt");
>>>>> // use d2s() function (double to string) to specify decimal places
>>>>> for (i=0; i<=2*PI; i+=0.01)
>>>>> print(f, d2s(i,6) + "  \t" + d2s(sin(i),6) + " \t" + d2s(cos(i),6));
>>>>> //
>>>>> //FINISH ~/hello.ijm
>>>>> //
>>>>>
>>>>> I then run the macro from the command line. The macro successfully
>> creates and populates the '~/hello.txt' file.  However, I get log4j
>> warnings and an error as shown below.  (Note, I have pasted in below the
>> entire output when I set the --debug flag.)
>>>>
>>>> You should report this bug using Fiji’s Help>Report a Bug command. The
>> bug report will automatically provide more information about your setup and
>> it will help the Fiji developers keep track of your bug report so that it
>> is not forgotten. http://imagej.net/Bugs
>>>>
>>
>>
>> It appears that this is identical to an existing bug report:
>> http://fiji.sc/bugzilla/show_bug.cgi?id=961
>>
>> I have been away from ImageJ for so long - I am astounded by the changes
>> and still a bit lost.
>>
>> Cheers,
>> Ben
>>
>>
>>
>>
>>
>>>> -wayne
>>>>
>>>>> [btupper@fcm-flow ~]$ fiji --headless -macro /home/btupper/hello.ijm
>>>>> log4j:WARN No appenders could be found for logger
>> (org.bushe.swing.event.EventService).
>>>>> log4j:WARN Please initialize the log4j system properly.
>>>>> log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig
>> for more info.
>>>>> [ERROR] Skipping unsupported option -port7
>>>>>
>>>>> Here is a bit more info about the Fiji installation.
>>>>>
>>>>> [btupper@fcm-flow ~]$ fiji --print-java-home
>>>>> /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24/
>>>>> [btupper@fcm-flow ~]$ fiji --print-ij-dir
>>>>> /opt/Fiji.app
>>>>>
>>>>>
>>>>> Do I need to worry about the warnings?  I can't locate any
>> instructions for initializing log4j on the Fiji website.  I have found
>> these 3rd party instructions [
>> http://www.javabeat.net/baisc-steps-to-configure-log4j-using-xml-and-properties-file/
>> ] but I have no idea if the are appropriate for what Fiji requires.
>>>>>
>>>>> I also have no idea how to resolve the error.
>>>>>
>>>
>>> Ah - will do.  I assumed that it was something in my own setup - I just
>> noticed that log4j is distributed with Fiji in the Fiji/jars subdirectory.
>>>
>>>
>>>>> Any suggestions?
>>>>>
>>>>> Thanks!
>>>>> Ben
>>>>>
>>>>>
>>>>> P.S. Below is the command and output with --debug set
>>>>>
>>>>> [btupper@fcm-flow ~]$ fiji --debug --headless -macro
>> /home/btupper/hello.ijm
>>>>> Available RAM: 3727MB, using 3/4 of that: 2796MB
>>>>> JRE not found in '/opt/Fiji.app/jre'
>>>>> JAVA_HOME contains a JRE:
>> '/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre'
>>>>> Re-executing with correct library lookup path
>> (/opt/Fiji.app/lib/linux64:/opt/Fiji.app/mm/linux64)
>>>>> Available RAM: 3727MB, using 3/4 of that: 2796MB
>>>>> JRE not found in '/opt/Fiji.app/jre'
>>>>> JAVA_HOME contains a JRE:
>> '/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre'
>>>>> Appending missing -batch flag for headless operation.
>>>>> java -Dpython.cachedir.skip=true -Dplugins.dir=/opt/Fiji.app -Xmx2796m
>> -Djava.awt.headless=true -Dapple.awt.UIElement=true -Xincgc
>> -XX:PermSize=128m -Dsun.java.command=ImageJ
>> -Djava.class.path=/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar
>> -Dimagej.dir=/opt/Fiji.app -Dij.dir=/opt/Fiji.app -Dfiji.dir=/opt/Fiji.app
>> -Dfiji.defaultLibPath=lib/amd64/server/libjvm.so
>> -Dfiji.executable=/opt/Fiji.app/fiji-linux64
>> -Dij.executable=/opt/Fiji.app/fiji-linux64
>> -Djava.library.path=/opt/Fiji.app/lib/linux64:/opt/Fiji.app/mm/linux64
>> -Dij.debug=true -Dscijava.log.level=debug net.imagej.launcher.ClassLauncher
>> -classpath /opt/Fiji.app/jars/ij-1.49m.jar fiji.Main -port7 -macro
>> /home/btupper/hello.ijm -batch
>>>>> Using JAVA_HOME /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre
>>>>> Opening Java library
>> /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre/lib/amd64/server/libjvm.so
>>>>> Adding option: -Djava.home=/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24/
>>>>> Launching main class fiji.Main with parameters [-port7, -macro,
>> /home/btupper/hello.ijm, -batch]
>>>>> Class loader = sun.misc.Launcher$AppClassLoader@b92d342
>>>>> ij1.plugin.dirs: null
>>>>> $HOME/.plugins: /home/btupper/.plugins does not exist
>>>>> Launching main class net.imagej.Main with parameters [-port7, -macro,
>> /home/btupper/hello.ijm, -batch]
>>>>> Class loader = sun.misc.Launcher$AppClassLoader@b92d342
>>>>> Checking class loader: sun.misc.Launcher$AppClassLoader@b92d342
>>>>> Checking URL: file:/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar
>>>>> Not Eclipse because first entry is:
>> file:/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar
>>>>> [DEBUG] Creating service: org.scijava.event.DefaultEventService
>>>>> [DEBUG] Creating service: org.scijava.log.StderrLogService
>>>>> [DEBUG] Created service 'org.scijava.log.StderrLogService' in 2 ms
>>>>> [DEBUG] Creating service: org.scijava.thread.DefaultThreadService
>>>>> [DEBUG] Created service 'org.scijava.thread.DefaultThreadService' in 1
>> ms
>>>>> [DEBUG] Created service 'org.scijava.event.DefaultEventService' in 47
>> ms
>>>>> [DEBUG] Creating service: org.scijava.script.DefaultScriptService
>>>>> [DEBUG] Creating service: org.scijava.plugin.DefaultPluginService
>>>>> [INFO] Found 777 plugins.
>>>>> [DEBUG] - class='org.scijava.module.process.DebugPreprocessor',
>> priority=Infinity, enabled=true, pluginType=PreprocessorPlugin
>>>>> [DEBUG] - class='org.scijava.module.process.DebugPostprocessor',
>> priority=Infinity, enabled=true, pluginType=PostprocessorPlugin
>>>>> [DEBUG] - class='net.imagej.plugins.tools.KonamiHandler',
>> name='Konami', priority=Infinity, enabled=true, pluginType=Tool
>>>>> [DEBUG] - class='org.scijava.event.DefaultEventService',
>> priority=100000.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.module.process.ValidityPreprocessor',
>> priority=10001.0, enabled=true, pluginType=PreprocessorPlugin
>>>>> [DEBUG] - class='org.scijava.ui.UIPreprocessor', priority=10000.0,
>> enabled=true, pluginType=PreprocessorPlugin
>>>>> [DEBUG] - class='org.scijava.display.ActiveDisplayPreprocessor',
>> priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
>>>>> [DEBUG] - class='org.scijava.module.process.GatewayPreprocessor',
>> priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
>>>>> [DEBUG] - class='org.scijava.module.process.ServicePreprocessor',
>> priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
>>>>> [DEBUG] - class='net.imagej.display.ActiveImagePreprocessor',
>> priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
>>>>> [DEBUG] -
>> class='net.imagej.legacy.plugin.ActiveImagePlusPreprocessor',
>> priority=10000.0, enabled=true, pluginType=PreprocessorPlugin
>>>>> [DEBUG] - class='io.scif.bf.BioFormatsFormat', name='Bio-Formats
>> Compatibility Format', priority=10000.0, enabled=true, pluginType=Format
>>>>> [DEBUG] - class='net.imagej.ops.slicer.SlicewiseRAI2RAI',
>> name='slicemapper', priority=10000.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.arithmetic.add.parallel.AddConstantToArrayDoubleImageP',
>> name='add', priority=111.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.arithmetic.add.parallel.AddConstantToArrayByteImageP',
>> name='add', priority=110.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='io.scif.ome.translators.OMETIFFTranslator$OMEtoOMETIFFTranslator',
>> priority=101.0, enabled=true, pluginType=ToOMETranslator
>>>>> [DEBUG] -
>> class='io.scif.ome.translators.OMETIFFTranslator$OMETIFFtoOMETranslator',
>> priority=101.0, enabled=true, pluginType=FromOMETranslator
>>>>> [DEBUG] -
>> class='io.scif.bf.ome.BioFormatsTranslator$BioFormatsOMETranslator',
>> priority=101.0, enabled=true, pluginType=ToOMETranslator
>>>>> [DEBUG] - class='net.imagej.app.ToplevelImageJApp', name='ImageJ',
>> priority=101.0, enabled=true, pluginType=App
>>>>> [DEBUG] -
>> class='net.imagej.ops.arithmetic.add.AddConstantToArrayDoubleImage',
>> name='add', priority=101.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTMessageWidget',
>> priority=100.0, enabled=true, pluginType=InputWidget
>>>>> [DEBUG] - class='org.scijava.module.process.InitPreprocessor',
>> priority=100.0, enabled=true, pluginType=PreprocessorPlugin
>>>>> [DEBUG] - class='org.scijava.script.DefaultScriptService',
>> priority=100.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.lut.DefaultLUTService', priority=100.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.legacy.display.LegacyImageDisplayViewer',
>> priority=100.0, enabled=true, pluginType=DisplayViewer
>>>>> [DEBUG] - class='net.imagej.legacy.display.LegacyTextDisplayViewer',
>> priority=100.0, enabled=true, pluginType=DisplayViewer
>>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingMessageWidget',
>> priority=100.0, enabled=true, pluginType=InputWidget
>>>>> [DEBUG] -
>> class='net.imagej.ui.swing.overlay.RectangleJHotDrawAdapter',
>> priority=100.0, enabled=true, pluginType=JHotDrawAdapter
>>>>> [DEBUG] -
>> class='net.imagej.ui.swing.overlay.ThresholdJHotDrawAdapter',
>> priority=100.0, enabled=true, pluginType=JHotDrawAdapter
>>>>> [DEBUG] -
>> class='io.scif.ome.translators.BMPTranslator$BMPOMETranslator',
>> priority=100.0, enabled=true, pluginType=ToOMETranslator
>>>>> [DEBUG] -
>> class='io.scif.ome.translators.MicromanagerTranslator$MicromanagerOMETranslator',
>> priority=100.0, enabled=true, pluginType=FromOMETranslator
>>>>> [DEBUG] -
>> class='io.scif.ome.translators.OBFTranslator$OBFOMETranslator',
>> priority=100.0, enabled=true, pluginType=ToOMETranslator
>>>>> [DEBUG] -
>> class='io.scif.ome.translators.TIFFTranslator$TIFFOMETranslator',
>> priority=100.0, enabled=true, pluginType=ToOMETranslator
>>>>> [DEBUG] -
>> class='io.scif.ome.translators.TIFFTranslator$OMETIFFTranslator',
>> priority=100.0, enabled=true, pluginType=FromOMETranslator
>>>>> [DEBUG] -
>> class='io.scif.ome.translators.APNGTranslator$OMEAPNGTranslator',
>> priority=100.0, enabled=true, pluginType=FromOMETranslator
>>>>> [DEBUG] -
>> class='io.scif.ome.translators.APNGTranslator$APNGOMETranslator',
>> priority=100.0, enabled=true, pluginType=ToOMETranslator
>>>>> [DEBUG] -
>> class='io.scif.ome.translators.ICSTranslator$OMEICSTranslator',
>> priority=100.0, enabled=true, pluginType=FromOMETranslator
>>>>> [DEBUG] -
>> class='io.scif.ome.translators.ICSTranslator$ICSOMETranslator',
>> priority=100.0, enabled=true, pluginType=ToOMETranslator
>>>>> [DEBUG] -
>> class='io.scif.ome.translators.DICOMTranslator$DICOMOMETranslator',
>> priority=100.0, enabled=true, pluginType=ToOMETranslator
>>>>> [DEBUG] -
>> class='io.scif.ome.translators.NRRDTranslator$NRRDOMETranslator',
>> priority=100.0, enabled=true, pluginType=ToOMETranslator
>>>>> [DEBUG] -
>> class='io.scif.ome.translators.EPSTranslator$OMEEPSTranslator',
>> priority=100.0, enabled=true, pluginType=FromOMETranslator
>>>>> [DEBUG] - class='net.imagej.operator.OpAdd', name='Add',
>> priority=100.0, enabled=true, pluginType=CalculatorOp
>>>>> [DEBUG] - class='net.imagej.app.ImageJApp', name='ImageJ',
>> priority=100.0, enabled=true, pluginType=App
>>>>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingRectangleTool',
>> name='Rectangle', description='Rectangular overlays',
>> iconPath='/icons/tools/rectangle.png', priority=100.0, enabled=true,
>> pluginType=Tool
>>>>> [DEBUG] -
>> class='net.imagej.ops.arithmetic.add.AddConstantToArrayByteImage',
>> name='add', priority=100.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$AddOp',
>> name='add', priority=100.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$DivideOp',
>> name='divide', priority=100.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.legacy.ui.LegacyUI', name='legacy',
>> priority=100.0, enabled=true, pluginType=UserInterface
>>>>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$MultiplyOp',
>> name='multiply', priority=100.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$SubtractOp',
>> name='subtract', priority=100.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ui.swing.overlay.EllipseJHotDrawAdapter',
>> priority=99.0, enabled=true, pluginType=JHotDrawAdapter
>>>>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingEllipseTool',
>> name='Oval', description='Oval selections',
>> iconPath='/icons/tools/oval.png', priority=99.0, enabled=true,
>> pluginType=Tool
>>>>> [DEBUG] - class='net.imagej.operator.OpSubtract', name='Subtract',
>> priority=99.0, enabled=true, pluginType=CalculatorOp
>>>>> [DEBUG] -
>> class='net.imagej.ui.swing.overlay.GeneralPathJHotDrawAdapter',
>> priority=98.5, enabled=true, pluginType=JHotDrawAdapter
>>>>> [DEBUG] - class='net.imagej.ui.swing.overlay.PolygonJHotDrawAdapter',
>> priority=98.0, enabled=true, pluginType=JHotDrawAdapter
>>>>> [DEBUG] - class='net.imagej.operator.OpMultiply', name='Multiply',
>> priority=98.0, enabled=true, pluginType=CalculatorOp
>>>>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPolygonTool',
>> name='Polygon', description='Polygon overlays',
>> iconPath='/icons/tools/polygon.png', priority=98.0, enabled=true,
>> pluginType=Tool
>>>>> [DEBUG] - class='net.imagej.ui.swing.overlay.LineJHotDrawAdapter',
>> priority=97.0, enabled=true, pluginType=JHotDrawAdapter
>>>>> [DEBUG] - class='net.imagej.operator.OpDivide', name='Divide',
>> priority=97.0, enabled=true, pluginType=CalculatorOp
>>>>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingLineTool',
>> name='Line', description='Straight line overlays',
>> iconPath='/icons/tools/line.png', priority=97.0, enabled=true,
>> pluginType=Tool
>>>>> [DEBUG] - class='net.imagej.ui.swing.overlay.PolylineJHotDrawAdapter',
>> priority=96.0, enabled=true, pluginType=JHotDrawAdapter
>>>>> [DEBUG] - class='net.imagej.operator.OpAnd', name='AND',
>> priority=96.0, enabled=true, pluginType=CalculatorOp
>>>>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPolylineTool',
>> name='Polyline', description='Polyline overlays',
>> iconPath='/icons/tools/polyline.png', priority=96.0, enabled=true,
>> pluginType=Tool
>>>>> [DEBUG] - class='net.imagej.ui.swing.overlay.AngleJHotDrawAdapter',
>> priority=95.0, enabled=true, pluginType=JHotDrawAdapter
>>>>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingAngleTool',
>> name='Angle', description='Angle overlays',
>> iconPath='/icons/tools/angle.png', priority=95.0, enabled=true,
>> pluginType=Tool
>>>>> [DEBUG] - class='net.imagej.operator.OpOr', name='OR', priority=95.0,
>> enabled=true, pluginType=CalculatorOp
>>>>> [DEBUG] - class='net.imagej.ui.swing.overlay.PointJHotDrawOverlay',
>> priority=94.0, enabled=true, pluginType=JHotDrawAdapter
>>>>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPointTool',
>> name='Point', description='Point overlays',
>> iconPath='/icons/tools/point.png', priority=94.0, enabled=true,
>> pluginType=Tool
>>>>> [DEBUG] - class='net.imagej.operator.OpXor', name='XOR',
>> priority=94.0, enabled=true, pluginType=CalculatorOp
>>>>> [DEBUG] - class='net.imagej.operator.OpMin', name='Min',
>> priority=93.0, enabled=true, pluginType=CalculatorOp
>>>>> [DEBUG] - class='net.imagej.operator.OpMax', name='Max',
>> priority=92.0, enabled=true, pluginType=CalculatorOp
>>>>> [DEBUG] - class='net.imagej.operator.OpAverage', name='Average',
>> priority=91.0, enabled=true, pluginType=CalculatorOp
>>>>> [DEBUG] - class='net.imagej.operator.OpDifference', name='Difference',
>> priority=90.0, enabled=true, pluginType=CalculatorOp
>>>>> [DEBUG] - class='net.imagej.operator.OpCopy', name='Copy',
>> priority=89.0, enabled=true, pluginType=CalculatorOp
>>>>> [DEBUG] - class='net.imagej.operator.OpTransparentZero',
>> name='Transparent-zero', priority=88.0, enabled=true,
>> pluginType=CalculatorOp
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.tracking.oldlap.FastLAPTrackerFactory',
>> priority=10.0, enabled=true, pluginType=SpotTrackerFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.tracking.oldlap.SimpleFastLAPTrackerFactory',
>> priority=10.0, enabled=true, pluginType=SpotTrackerFactory
>>>>> [DEBUG] - class='net.imagej.legacy.DefaultLegacyService',
>> priority=1.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingChoiceRadioWidget',
>> priority=1.0, enabled=true, pluginType=InputWidget
>>>>> [DEBUG] - class='net.imagej.ops.onthefly.JavassistOptimizer',
>> priority=1.0, enabled=true, pluginType=Optimizer
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.visualization.threedviewer.SpotDisplayer3DFactory',
>> priority=1.0, enabled=true, pluginType=ViewFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.tracking.kdtree.NearestNeighborTrackerFactory',
>> priority=1.0, enabled=true, pluginType=SpotTrackerFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.features.spot.SpotContrastAndSNRAnalyzerFactory',
>> priority=1.0, enabled=true, pluginType=SpotAnalyzerFactory
>>>>> [DEBUG] - class='net.imagej.ops.invert.InvertII', name='invert',
>> priority=1.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToDouble',
>> name='add', priority=0.6, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToLong',
>> name='add', priority=0.5, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToFloat',
>> name='add', priority=0.4, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToInteger',
>> name='add', priority=0.3, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToShort',
>> name='add', priority=0.2, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToByte',
>> name='add', priority=0.1, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.assign.AndDataValuesWith', menu='Process
>>> Math > AND...', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.app.AboutImageJ', label='About ImageJ...',
>> menu='Help > About ImageJ...', iconPath='/icons/commands/information.png',
>> priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.AbsDataValues',
>> menu='Process > Math > Abs...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionAdaptiveMedian',
>> menu='Process > Noise > Noise Reduction > Adaptive Median', priority=0.0,
>> enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.AddAxis',
>> menu='Image > Axes > Add Axis...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.AddData',
>> menu='Image > Data > Add Data...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.overlay.AddImage',
>> menu='Image > Overlay > Add Image', iconPath='/icons/commands/bricks.png',
>> priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.assign.AddNoiseToDataValues',
>> menu='Process > Noise > Add Noise...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.assign.AddSpecifiedNoiseToDataValues',
>> menu='Process > Noise > Add Specified Noise...', priority=0.0,
>> enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.AddToDataValues',
>> menu='Process > Math > Add...', iconPath='/icons/commands/sum.png',
>> priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionAlphaTrimmedMean',
>> menu='Process > Noise > Noise Reduction > Alpha Trimmed Mean',
>> priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.animation.AnimationOptions', menu='Image
>>> Animation > Animation Options...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.options.OptionsAppearance', menu='Edit >
>> Options > Appearance...', priority=0.0, enabled=true,
>> pluginType=OptionsPlugin
>>>>> [DEBUG] - class='net.imagej.ops.commands.threshold.GlobalThresholder',
>> menu='Image > Threshold > Apply Threshold', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.options.OptionsArrowTool', menu='Edit >
>> Options > Arrow Tool...', priority=0.0, enabled=true,
>> pluginType=OptionsPlugin
>>>>> [DEBUG] - class='net.imagej.plugins.commands.display.AutoContrast',
>> menu='Image > Adjust > Auto-Contrast', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.axispos.AxisPositionBackward',
>> menu='Image > Axes > Axis Position Backward', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.axispos.AxisPositionForward',
>> menu='Image > Axes > Axis Position Forward', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.misc.Benchmark',
>> menu='Plugins > Utilities > Benchmark',
>> iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.Binner',
>> menu='Image > Transform > Bin...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.binary.Binarize',
>> menu='Process > Binary > Binarize...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.display.interactive.BrightnessContrast',
>> menu='Image > Adjust > Brightness/Contrast...',
>> iconPath='/icons/commands/contrast.png', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.debug.ButtonDemo',
>> menu='Plugins > Sandbox > Button Demo', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.display.CaptureImage',
>> menu='Plugins > Utilities > Capture Image', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.display.CaptureScreen',
>> menu='Plugins > Utilities > Capture Screen', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.typechange.TypeChanger',
>> menu='Image > Type > Change...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.display.ChannelsTool',
>> menu='Image > Color > Channels Tool...',
>> iconPath='/icons/commands/color_wheel.png', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.options.OptionsChannels', menu='Edit >
>> Options > Channels...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>>>> [DEBUG] - class='org.scijava.plugins.commands.io.ClearRecent',
>> label='Clear Recent', menu='File > Open Recent > Clear List', priority=0.0,
>> enabled=true, pluginType=Command
>>>>> [DEBUG] - class='org.scijava.plugins.commands.display.Close',
>> menu='File > Close', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.binary.CloseBinaryImage',
>> menu='Process > Binary > Close', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='org.scijava.plugins.commands.display.CloseAll',
>> menu='File > Close All', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.options.OptionsCompatibility', menu='Edit
>>> Options > Compatibility...', priority=0.0, enabled=true,
>> pluginType=OptionsPlugin
>>>>> [DEBUG] - class='net.imagej.options.OptionsCompiler', menu='Edit >
>> Options > Compiler...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionContraharmonicMean',
>> menu='Process > Noise > Noise Reduction > Contraharmonic Mean',
>> priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.options.OptionsConversions', menu='Edit >
>> Options > Conversions...', priority=0.0, enabled=true,
>> pluginType=OptionsPlugin
>>>>> [DEBUG] - class='net.imagej.ops.commands.convert.ConvertImgPlus',
>> menu='Image > Convert', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.ops.commands.convolve.Convolve',
>> menu='Image > Convolve', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.app.CopyToSystem',
>> menu='Edit > Copy To System', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.binary.CreateMask',
>> menu='Process > Binary > Create Mask...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.app.CreateShortcut',
>> menu='Plugins > Shortcuts > Create Shortcut...',
>> iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.CropImage',
>> menu='Image > Crop', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.options.OptionsDicom', menu='Edit >
>> Options > DICOM...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>>>> [DEBUG] - class='net.imagej.options.OptionsOverlay', label='Default
>> Overlay Settings', menu='Image > Overlay > Overlay Options...',
>> priority=0.0, enabled=true, pluginType=OptionsPlugin
>>>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.DeleteAxis',
>> menu='Image > Axes > Delete Axis...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.DeleteData',
>> menu='Image > Data > Delete Data...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.display.interactive.DeleteThreshold',
>> menu='Image > Adjust > Delete Threshold', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.display.DeselectOverlays', menu='Edit >
>> Selection > Deselect Overlays', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='org.scijava.ui.swing.commands.DialogPromptDemo',
>> menu='Plugins > Sandbox > Dialog Prompt Demo', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.binary.DilateBinaryImage', menu='Process
>>> Binary > Dilate', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.assign.DivideDataValuesBy',
>> menu='Process > Math > Divide...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='org.scijava.plugins.commands.debug.DumpStack',
>> menu='Plugins > Debug > Dump Stack', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.DuplicateImage',
>> menu='Image > Duplicate', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.imglib.DuplicateImageContext',
>> menu='Duplicate...', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsEast',
>> menu='Process > Shadows > East', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.EditAxes',
>> menu='Image > Axes > Edit Axes...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.assign.EquationDataValues',
>> menu='Process > Math > Equation...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.binary.ErodeBinaryImage',
>> menu='Process > Binary > Erode', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.ExpDataValues',
>> menu='Process > Math > Exp...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.FillDataValues',
>> menu='Edit > Fill', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='org.scijava.ui.swing.commands.CommandFinder',
>> menu='Plugins > Utilities > Find Commands...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.neigh.FindEdges',
>> menu='Process > Find Edges', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.display.Flatten',
>> menu='Image > Overlay > Flatten', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.FlipAxis',
>> menu='Image > Transform > Flip Axis', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.rotate.FlipHorizontally',
>> menu='Image > Transform > Flip Horizontally', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.rotate.FlipVertically',
>> menu='Image > Transform > Flip Vertically', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.tools.FloodFillToolConfig',
>> label='Flood Fill Tool', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.options.OptionsFont', menu='Edit > Options
>>> Fonts...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.overlay.FromOverlayManager', menu='Image
>>> Overlay > From Overlay Manager', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.GammaDataValues',
>> menu='Process > Math > Gamma...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.GaussianBlur',
>> menu='Process > Filters > Gaussian Blur...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionGeometricMean',
>> menu='Process > Noise > Noise Reduction > Geometric Mean', priority=0.0,
>> enabled=true, pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionHarmonicMean',
>> menu='Process > Noise > Noise Reduction > Harmonic Mean', priority=0.0,
>> enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.display.HistogramPlot',
>> menu='Analyze > Histogram Plot', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.calculator.ImageCalculator',
>> menu='Process > Image Calculator...',
>> iconPath='/icons/commands/calculator.png', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.io.OpenDataset',
>> menu='File > Import > Image... ', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.io.SaveDataset',
>> menu='File > Export > Image...  ', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.app.ImageJWebsite',
>> menu='Help > ImageJ Website...', iconPath='/icons/commands/world_link.png',
>> priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.legacy.ImageJ2Options', label='ImageJ2
>> Options', menu='Edit > Options > ImageJ2...', priority=0.0, enabled=true,
>> pluginType=OptionsPlugin
>>>>> [DEBUG] - class='net.imagej.options.OptionsInputOutput', menu='Edit >
>> Options > Input/Output...', priority=0.0, enabled=true,
>> pluginType=OptionsPlugin
>>>>> [DEBUG] - class='net.imagej.plugins.commands.debug.InspectImg',
>> menu='Plugins > Debug > Inspect Image', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='org.scijava.ui.swing.commands.InspectObjects',
>> menu='Plugins > Debug > Inspect Objects', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='org.scijava.plugins.commands.debug.InvalidCommandDemo$InvalidCommand',
>> menu='Plugins > Debug > Invalid Command', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.InvertDataValues',
>> menu='Edit > Invert...', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.lut.LUTSelector', label='LUT Selector',
>> menu='Image > Lookup Tables > Select...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.overlay.OverlayLabels',
>> menu='Image > Overlay > Labels...', iconPath='/icons/commands/bricks.png',
>> priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.options.OptionsLineWidth', menu='Edit >
>> Options > Line Width...', priority=0.0, enabled=true,
>> pluginType=OptionsPlugin
>>>>> [DEBUG] - class='net.imagej.plugins.commands.app.ListShortcuts',
>> menu='Plugins > Shortcuts > List Shortcuts...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.LogDataValues',
>> menu='Process > Math > Log...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='org.scijava.ui.swing.options.OptionsLookAndFeel',
>> menu='Edit > Options > Look and Feel...', priority=0.0, enabled=true,
>> pluginType=OptionsPlugin
>>>>> [DEBUG] - class='net.imagej.plugins.commands.binary.MakeBinary',
>> menu='Process > Binary > Make Binary...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.overlay.ConvertToMask',
>> menu='Process > Binary > Make Mask Overlay...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.debug.MandelbrotSetImage', menu='Plugins
>>> Sandbox > Mandelbrot Set', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.MaxDataValues',
>> menu='Process > Math > Max...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMax',
>> menu='Process > Noise > Noise Reduction > Maximum', priority=0.0,
>> enabled=true, pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMean',
>> menu='Process > Noise > Noise Reduction > Mean', priority=0.0,
>> enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.debug.MeasurementDemo',
>> menu='Plugins > Sandbox > Measurement Demo', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMedian',
>> menu='Process > Noise > Noise Reduction > Median', priority=0.0,
>> enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.options.OptionsMemoryAndThreads',
>> menu='Edit > Options > Memory & Threads...', priority=0.0, enabled=true,
>> pluginType=OptionsPlugin
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMidpoint',
>> menu='Process > Noise > Noise Reduction > Midpoint', priority=0.0,
>> enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.MinDataValues',
>> menu='Process > Math > Min...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMin',
>> menu='Process > Noise > Noise Reduction > Minimum', priority=0.0,
>> enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.options.OptionsMisc', menu='Edit > Options
>>> Misc...', priority=0.0, enabled=true, pluginType=OptionsPlugin
>>>>> [DEBUG] - class='net.imagej.legacy.plugin.MixedWorldCommand',
>> menu='Plugins > Sandbox > Mixed World Command', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.debug.MultidimImage',
>> menu='Plugins > Sandbox > Multidimensional Test Image', priority=0.0,
>> enabled=true, pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.assign.MultiplyDataValuesBy',
>> menu='Process > Math > Multiply...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.NanBackground',
>> menu='Process > Math > NaN Background', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.io.NewImage', label='New
>> Image...', menu='File > New > Image...',
>> iconPath='/icons/commands/picture.png', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNorth',
>> menu='Process > Shadows > North', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.correlate.ShadowsNortheast',
>> menu='Process > Shadows > Northeast', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.correlate.ShadowsNorthwest',
>> menu='Process > Shadows > Northwest', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.OrDataValuesWith',
>> menu='Process > Math > OR...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.binary.OpenBinaryImage',
>> menu='Process > Binary > Open', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='org.scijava.plugins.commands.io.OpenFile', menu='File
>>> Open...', iconPath='/icons/commands/folder_picture.png', priority=0.0,
>> enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomOriginalScale',
>> menu='Image > Zoom > Original Scale', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.display.interactive.OrthogonalViews',
>> menu='Image > Stacks > Orthogonal Views',
>> iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.ui.swing.commands.OverlayManager',
>> menu='Image > Overlay > Overlay Manager', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.overlay.OverlayProperties',
>> label='Overlay Properties...', menu='Image > Overlay > Properties...',
>> priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.tools.PaintBrushToolConfig',
>> label='Paintbrush Tool', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='org.scijava.plugins.commands.debug.ParamAssignOrder',
>> menu='Plugins > Sandbox > Parameter Assignment Order', priority=0.0,
>> enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.tools.PencilToolConfig',
>> label='Pencil Tool', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='fiji.DefaultFijiService', priority=0.0, enabled=true,
>> pluginType=Service
>>>>> [DEBUG] - class='fiji.patches.FijiAppConfiguration', priority=0.0,
>> enabled=true, pluginType=LegacyAppConfiguration
>>>>> [DEBUG] - class='fiji.patches.OldLegacyEditor', priority=0.0,
>> enabled=true, pluginType=LegacyEditor
>>>>> [DEBUG] - class='fiji.patches.OldAppConfiguration', priority=0.0,
>> enabled=true, pluginType=LegacyAppConfiguration
>>>>> [DEBUG] - class='net.imglib2.meta.units.DefaultUnitService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTObjectWidget',
>> priority=0.0, enabled=true, pluginType=InputWidget
>>>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTToggleWidget',
>> priority=0.0, enabled=true, pluginType=InputWidget
>>>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTChoiceWidget',
>> priority=0.0, enabled=true, pluginType=InputWidget
>>>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTNumberWidget',
>> priority=0.0, enabled=true, pluginType=InputWidget
>>>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTTextWidget',
>> priority=0.0, enabled=true, pluginType=InputWidget
>>>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTFileWidget',
>> priority=0.0, enabled=true, pluginType=InputWidget
>>>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTButtonWidget',
>> priority=0.0, enabled=true, pluginType=InputWidget
>>>>> [DEBUG] - class='net.imagej.plugins.uploaders.ssh.SSHFileUploader',
>> priority=0.0, enabled=true, pluginType=Uploader
>>>>> [DEBUG] - class='net.imagej.plugins.uploaders.ssh.SFTPFileUploader',
>> priority=0.0, enabled=true, pluginType=Uploader
>>>>> [DEBUG] - class='net.imagej.plugins.uploaders.webdav.WebDAVUploader',
>> priority=0.0, enabled=true, pluginType=Uploader
>>>>> [DEBUG] -
>> class='org.scijava.plugins.text.markdown.MarkdownTextFormat', priority=0.0,
>> enabled=true, pluginType=TextFormat
>>>>> [DEBUG] - class='net.imagej.ui.awt.AWTRenderingService', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.ui.awt.AWTScreenCaptureService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.object.DefaultObjectService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.convert.DefaultConverter', priority=0.0,
>> enabled=true, pluginType=Converter
>>>>> [DEBUG] - class='org.scijava.convert.DefaultConvertService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.input.DefaultInputService', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.ui.DefaultUIService', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.ui.dnd.DefaultDragAndDropService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.ui.dnd.ListDragAndDropHandler',
>> priority=0.0, enabled=true, pluginType=DragAndDropHandler
>>>>> [DEBUG] - class='org.scijava.ui.dnd.ScriptFileDragAndDropHandler',
>> priority=0.0, enabled=true, pluginType=DragAndDropHandler
>>>>> [DEBUG] - class='org.scijava.ui.console.UIArgument', priority=0.0,
>> enabled=true, pluginType=ConsoleArgument
>>>>> [DEBUG] - class='org.scijava.plugin.DefaultPluginService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.text.DefaultTextService', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.display.DefaultDisplayService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.prefs.DefaultPrefService', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.io.DefaultRecentFileService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.io.console.OpenArgument', priority=0.0,
>> enabled=true, pluginType=ConsoleArgument
>>>>> [DEBUG] - class='org.scijava.io.DefaultIOService', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.widget.DefaultWidgetService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.menu.DefaultMenuService', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.tool.DefaultToolService', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.app.DefaultAppService', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.app.DefaultStatusService', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.module.DefaultModuleService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.welcome.DefaultWelcomeService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.thread.DefaultThreadService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.script.io.ScriptIOPlugin', priority=0.0,
>> enabled=true, pluginType=IOPlugin
>>>>> [DEBUG] - class='org.scijava.script.DefaultScriptHeaderService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.event.DefaultEventHistory', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.platform.DefaultPlatformService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.options.DefaultOptionsService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.command.DefaultCommandService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.command.console.RunArgument',
>> priority=0.0, enabled=true, pluginType=ConsoleArgument
>>>>> [DEBUG] - class='org.scijava.console.DefaultConsoleService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.SciJava', priority=0.0, enabled=true,
>> pluginType=Gateway
>>>>> [DEBUG] - class='net.imagej.operator.DefaultCalculatorService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.autoscale.DefaultAutoscaleService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.sampler.DefaultSamplerService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.lut.io.LUTIOPlugin', priority=0.0,
>> enabled=true, pluginType=IOPlugin
>>>>> [DEBUG] - class='net.imagej.display.DefaultDatasetView', priority=0.0,
>> enabled=true, pluginType=DataView
>>>>> [DEBUG] - class='net.imagej.display.DefaultImageDisplay',
>> priority=0.0, enabled=true, pluginType=Display
>>>>> [DEBUG] - class='net.imagej.display.DefaultZoomService', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.display.DefaultOverlayService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.display.DefaultImageDisplayService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.display.DefaultOverlayView', priority=0.0,
>> enabled=true, pluginType=DataView
>>>>> [DEBUG] - class='net.imagej.display.DefaultWindowService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.types.DataType32BitSignedFloat',
>> priority=0.0, enabled=true, pluginType=DataType
>>>>> [DEBUG] - class='net.imagej.types.DataType12BitUnsignedInteger',
>> priority=0.0, enabled=true, pluginType=DataType
>>>>> [DEBUG] - class='net.imagej.types.DataType64BitSignedFloat',
>> priority=0.0, enabled=true, pluginType=DataType
>>>>> [DEBUG] - class='net.imagej.types.DataType8BitSignedInteger',
>> priority=0.0, enabled=true, pluginType=DataType
>>>>> [DEBUG] - class='net.imagej.types.DataType32BitUnsignedInteger',
>> priority=0.0, enabled=true, pluginType=DataType
>>>>> [DEBUG] - class='net.imagej.types.DataType32BitSignedInteger',
>> priority=0.0, enabled=true, pluginType=DataType
>>>>> [DEBUG] - class='net.imagej.types.DataType64BitSignedInteger',
>> priority=0.0, enabled=true, pluginType=DataType
>>>>> [DEBUG] - class='net.imagej.types.DataType16BitSignedInteger',
>> priority=0.0, enabled=true, pluginType=DataType
>>>>> [DEBUG] - class='net.imagej.types.DataType16BitUnsignedInteger',
>> priority=0.0, enabled=true, pluginType=DataType
>>>>> [DEBUG] - class='net.imagej.types.DataType1BitUnsignedInteger',
>> priority=0.0, enabled=true, pluginType=DataType
>>>>> [DEBUG] - class='net.imagej.types.DataType8BitUnsignedInteger',
>> priority=0.0, enabled=true, pluginType=DataType
>>>>> [DEBUG] - class='net.imagej.types.DefaultDataTypeService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.DefaultImgPlusService', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.minmax.DefaultMinMaxMethod', priority=0.0,
>> enabled=true, pluginType=MinMaxMethod
>>>>> [DEBUG] - class='net.imagej.ui.DefaultImageJUIService', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.ui.dnd.LUTFileDragAndDropHandler',
>> priority=0.0, enabled=true, pluginType=DragAndDropHandler
>>>>> [DEBUG] - class='net.imagej.measure.DefaultStatisticsService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.measure.DefaultMeasurementService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.threshold.DefaultThresholdService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.animation.DefaultAnimationService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.table.DefaultTableDisplay', priority=0.0,
>> enabled=true, pluginType=Display
>>>>> [DEBUG] - class='net.imagej.DefaultDatasetService', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='io.scif.io.URLHandle', priority=0.0, enabled=true,
>> pluginType=IStreamAccess
>>>>> [DEBUG] - class='io.scif.codec.LZWCodec', priority=0.0, enabled=true,
>> pluginType=Codec
>>>>> [DEBUG] - class='io.scif.io.DefaultNIOService', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='io.scif.img.converters.DefaultPlaneConverterService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='io.scif.img.cell.SCIFIOCellCacheCleaningProvider',
>> priority=0.0, enabled=true, pluginType=RefProvider
>>>>> [DEBUG] - class='io.scif.codec.JPEG2000Codec', priority=0.0,
>> enabled=true, pluginType=Codec
>>>>> [DEBUG] - class='io.scif.img.DefaultImgUtilityService', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='io.scif.gui.DefaultGUIService', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='io.scif.filters.DimensionSwapper', priority=0.0,
>> enabled=true, pluginType=Filter
>>>>> [DEBUG] - class='io.scif.xml.DefaultXMLService', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='io.scif.codec.HuffmanCodec', priority=0.0,
>> enabled=true, pluginType=Codec
>>>>> [DEBUG] - class='io.scif.refs.DefaultRefManagerService', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='io.scif.services.DefaultFormatService', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='io.scif.codec.RPZACodec', priority=0.0, enabled=true,
>> pluginType=Codec
>>>>> [DEBUG] - class='io.scif.codec.MJPBCodec', priority=0.0, enabled=true,
>> pluginType=Codec
>>>>> [DEBUG] - class='io.scif.codec.PassthroughCodec', priority=0.0,
>> enabled=true, pluginType=Codec
>>>>> [DEBUG] - class='io.scif.filters.PlaneSeparatorMetadata',
>> priority=0.0, enabled=true, pluginType=MetadataWrapper
>>>>> [DEBUG] - class='io.scif.filters.ChannelFiller', priority=0.0,
>> enabled=true, pluginType=Filter
>>>>> [DEBUG] - class='io.scif.codec.PackbitsCodec', priority=0.0,
>> enabled=true, pluginType=Codec
>>>>> [DEBUG] - class='io.scif.filters.MinMaxFilter', priority=0.0,
>> enabled=true, pluginType=Filter
>>>>> [DEBUG] - class='io.scif.io.BZip2Handle', priority=0.0, enabled=true,
>> pluginType=IStreamAccess
>>>>> [DEBUG] - class='io.scif.services.DefaultTranslatorService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='io.scif.img.cell.RefMapCleaningProvider',
>> priority=0.0, enabled=true, pluginType=RefProvider
>>>>> [DEBUG] - class='io.scif.codec.QTRLECodec', priority=0.0,
>> enabled=true, pluginType=Codec
>>>>> [DEBUG] - class='io.scif.io.GZipHandle', priority=0.0, enabled=true,
>> pluginType=IStreamAccess
>>>>> [DEBUG] - class='io.scif.codec.LosslessJPEGCodec', priority=0.0,
>> enabled=true, pluginType=Codec
>>>>> [DEBUG] - class='io.scif.codec.MSVideoCodec', priority=0.0,
>> enabled=true, pluginType=Codec
>>>>> [DEBUG] - class='io.scif.filters.PlaneSeparator', priority=0.0,
>> enabled=true, pluginType=Filter
>>>>> [DEBUG] - class='io.scif.codec.Base64Codec', priority=0.0,
>> enabled=true, pluginType=Codec
>>>>> [DEBUG] - class='io.scif.SCIFIO', priority=0.0, enabled=true,
>> pluginType=Gateway
>>>>> [DEBUG] - class='io.scif.codec.DefaultCodecService', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='io.scif.codec.JPEGCodec', priority=0.0, enabled=true,
>> pluginType=Codec
>>>>> [DEBUG] - class='io.scif.img.ImgPlusCtxCleaningProvider',
>> priority=0.0, enabled=true, pluginType=RefProvider
>>>>> [DEBUG] - class='io.scif.codec.LuraWaveCodec', priority=0.0,
>> enabled=true, pluginType=Codec
>>>>> [DEBUG] - class='io.scif.img.cell.SCIFIOCellCleaningProvider',
>> priority=0.0, enabled=true, pluginType=RefProvider
>>>>> [DEBUG] - class='io.scif.codec.MSRLECodec', priority=0.0,
>> enabled=true, pluginType=Codec
>>>>> [DEBUG] - class='io.scif.img.cell.cache.MapDBCache', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='io.scif.DefaultMetadataService', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='io.scif.img.cell.SCIFIOCellImgCleaningProvider',
>> priority=0.0, enabled=true, pluginType=RefProvider
>>>>> [DEBUG] - class='io.scif.filters.FileStitcher', priority=0.0,
>> enabled=true, pluginType=Filter
>>>>> [DEBUG] - class='io.scif.services.DefaultFilePatternService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='io.scif.io.ZipHandle', priority=0.0, enabled=true,
>> pluginType=IStreamAccess
>>>>> [DEBUG] - class='io.scif.codec.NikonCodec', priority=0.0,
>> enabled=true, pluginType=Codec
>>>>> [DEBUG] - class='io.scif.formats.tiff.DefaultTiffService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='io.scif.services.DefaultLocationService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='io.scif.codec.ZlibCodec', priority=0.0, enabled=true,
>> pluginType=Codec
>>>>> [DEBUG] - class='io.scif.services.JAIIIOServiceImpl', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='io.scif.formats.qt.DefaultQTJavaService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Batch',
>> priority=0.0, enabled=true, pluginType=ConsoleArgument
>>>>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$IJPath',
>> priority=0.0, enabled=true, pluginType=ConsoleArgument
>>>>> [DEBUG] - class='net.imagej.legacy.plugin.LegacyAutoImporter',
>> priority=0.0, enabled=true, pluginType=AutoImporter
>>>>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Macro',
>> priority=0.0, enabled=true, pluginType=ConsoleArgument
>>>>> [DEBUG] - class='net.imagej.legacy.LegacyJavaRunner', priority=0.0,
>> enabled=true, pluginType=JavaRunner
>>>>> [DEBUG] -
>> class='net.imagej.legacy.display.DefaultImagePlusDisplayViewer',
>> priority=0.0, enabled=true, pluginType=DisplayViewer
>>>>> [DEBUG] - class='net.imagej.legacy.display.DefaultImagePlusDisplay',
>> priority=0.0, enabled=true, pluginType=Display
>>>>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Run',
>> priority=0.0, enabled=true, pluginType=ConsoleArgument
>>>>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Filename',
>> priority=0.0, enabled=true, pluginType=ConsoleArgument
>>>>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Debug',
>> priority=0.0, enabled=true, pluginType=ConsoleArgument
>>>>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Eval',
>> priority=0.0, enabled=true, pluginType=ConsoleArgument
>>>>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Port',
>> priority=0.0, enabled=true, pluginType=ConsoleArgument
>>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingDateWidget',
>> priority=0.0, enabled=true, pluginType=InputWidget
>>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingFileWidget',
>> priority=0.0, enabled=true, pluginType=InputWidget
>>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingChoiceWidget',
>> priority=0.0, enabled=true, pluginType=InputWidget
>>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingNumberWidget',
>> priority=0.0, enabled=true, pluginType=InputWidget
>>>>> [DEBUG] - class='org.scijava.ui.swing.SwingIconService', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] -
>> class='org.scijava.ui.swing.viewer.text.SwingTextDisplayViewer',
>> priority=0.0, enabled=true, pluginType=DisplayViewer
>>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingObjectWidget',
>> priority=0.0, enabled=true, pluginType=InputWidget
>>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingToggleWidget',
>> priority=0.0, enabled=true, pluginType=InputWidget
>>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingTextWidget',
>> priority=0.0, enabled=true, pluginType=InputWidget
>>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingColorWidget',
>> priority=0.0, enabled=true, pluginType=InputWidget
>>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingButtonWidget',
>> priority=0.0, enabled=true, pluginType=InputWidget
>>>>> [DEBUG] -
>> class='org.scijava.plugins.scripting.java.CommandJavaRunner', priority=0.0,
>> enabled=true, pluginType=JavaRunner
>>>>> [DEBUG] -
>> class='org.scijava.plugins.scripting.java.DefaultJavaService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] -
>> class='net.imagej.ui.swing.sdi.viewer.SwingSdiImageDisplayViewer',
>> priority=0.0, enabled=true, pluginType=DisplayViewer
>>>>> [DEBUG] -
>> class='net.imagej.ui.swing.viewer.table.SwingTableDisplayViewer',
>> priority=0.0, enabled=true, pluginType=DisplayViewer
>>>>> [DEBUG] - class='net.imagej.ui.swing.overlay.JHotDrawService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] -
>> class='net.imagej.ui.swing.mdi.viewer.SwingMdiImageDisplayViewer',
>> priority=0.0, enabled=true, pluginType=DisplayViewer
>>>>> [DEBUG] - class='net.imagej.ui.swing.widget.SwingColorTableWidget',
>> priority=0.0, enabled=true, pluginType=InputWidget
>>>>> [DEBUG] - class='net.imagej.ui.swing.widget.SwingDimSelectionWidget',
>> priority=0.0, enabled=true, pluginType=InputWidget
>>>>> [DEBUG] - class='net.imagej.ui.swing.widget.SwingHistogramWidget',
>> priority=0.0, enabled=true, pluginType=InputWidget
>>>>> [DEBUG] - class='net.imagej.updater.FileUploader', priority=0.0,
>> enabled=true, pluginType=Uploader
>>>>> [DEBUG] - class='net.imagej.updater.DefaultUpdateService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.updater.DefaultUploaderService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.ImageJ', priority=0.0, enabled=true,
>> pluginType=Gateway
>>>>> [DEBUG] - class='net.imagej.ops.DefaultOpService', priority=0.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.ops.threshold.LocalMean', priority=0.0,
>> enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.DefaultOpMatchingService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.plugins.commands.dataset.LoadDataset',
>> priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.overlay.SelectedManagerOverlayProperties',
>> priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.misc.ApplyLookupTable',
>> priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] -
>> class='org.scijava.plugins.scripting.jruby.JRubyScriptHeader',
>> priority=0.0, enabled=true, pluginType=ScriptHeader
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.action.TrackBranchAnalysis$Factory',
>> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.features.track.TrackLocationAnalyzer',
>> priority=0.0, enabled=true, pluginType=TrackAnalyzer
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.visualization.hyperstack.HyperStackDisplayerFactory',
>> priority=0.0, enabled=true, pluginType=ViewFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.features.edges.EdgeTimeLocationAnalyzer',
>> priority=0.0, enabled=true, pluginType=EdgeAnalyzer
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.action.ResetRadiusAction$Factory',
>> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.action.RecalculateFeatureAction$Factory',
>> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.action.ISBIChallengeExporter$Factory',
>> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.action.MergeFileAction$Factory', priority=0.0,
>> enabled=true, pluginType=TrackMateActionFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.features.spot.SpotRadiusEstimatorFactory',
>> priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.features.track.TrackBranchingAnalyzer',
>> priority=0.0, enabled=true, pluginType=TrackAnalyzer
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.action.PlotNSpotsVsTimeAction$Factory',
>> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.action.ExportStatsToIJAction$Factory',
>> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.features.edges.EdgeTargetAnalyzer',
>> priority=0.0, enabled=true, pluginType=EdgeAnalyzer
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.features.track.TrackDurationAnalyzer',
>> priority=0.0, enabled=true, pluginType=TrackAnalyzer
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.features.spot.SpotIntensityAnalyzerFactory',
>> priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.features.edges.EdgeVelocityAnalyzer',
>> priority=0.0, enabled=true, pluginType=EdgeAnalyzer
>>>>> [DEBUG] - class='fiji.plugin.trackmate.detection.LogDetectorFactory',
>> priority=0.0, enabled=true, pluginType=SpotDetectorFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.action.ExportTracksToXML$Factory',
>> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.action.LinkNew3DViewerAction$Factory',
>> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.tracking.oldlap.SimpleLAPTrackerFactory',
>> priority=0.0, enabled=true, pluginType=SpotTrackerFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.action.ResetSpotTimeFeatureAction$Factory',
>> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.action.RadiusToEstimatedAction$Factory',
>> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.action.IcyTrackExporter$Factory',
>> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.action.CaptureOverlayAction$Factory',
>> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.tracking.sparselap.SimpleSparseLAPTrackerFactory',
>> priority=0.0, enabled=true, pluginType=SpotTrackerFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.features.spot.SpotMorphologyAnalyzerFactory',
>> priority=0.0, enabled=false, pluginType=SpotAnalyzerFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.features.track.TrackSpotQualityFeatureAnalyzer',
>> priority=0.0, enabled=true, pluginType=TrackAnalyzer
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.action.CopyOverlayAction$Factory',
>> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.tracking.sparselap.SparseLAPTrackerFactory',
>> priority=0.0, enabled=true, pluginType=SpotTrackerFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.detection.ManualDetectorFactory',
>> priority=0.0, enabled=true, pluginType=SpotDetectorFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.features.manual.ManualSpotColorAnalyzerFactory',
>> priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory
>>>>> [DEBUG] - class='fiji.plugin.trackmate.detection.DogDetectorFactory',
>> priority=0.0, enabled=true, pluginType=SpotDetectorFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.action.ExtractTrackStackAction$Factory',
>> priority=0.0, enabled=true, pluginType=TrackMateActionFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.tracking.oldlap.LAPTrackerFactory',
>> priority=0.0, enabled=true, pluginType=SpotTrackerFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.features.manual.ManualEdgeColorAnalyzer',
>> priority=0.0, enabled=true, pluginType=EdgeAnalyzer
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.features.spot.SpotContrastAnalyzerFactory',
>> priority=0.0, enabled=false, pluginType=SpotAnalyzerFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.features.track.TrackSpeedStatisticsAnalyzer',
>> priority=0.0, enabled=true, pluginType=TrackAnalyzer
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.detection.DownsampleLogDetectorFactory',
>> priority=0.0, enabled=true, pluginType=SpotDetectorFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.visualization.trackscheme.TrackSchemeFactory',
>> priority=0.0, enabled=true, pluginType=ViewFactory
>>>>> [DEBUG] -
>> class='fiji.plugin.trackmate.features.track.TrackIndexAnalyzer',
>> priority=0.0, enabled=true, pluginType=TrackAnalyzer
>>>>> [DEBUG] - class='io.scif.cli.commands.Help', priority=0.0,
>> enabled=true, pluginType=SCIFIOToolCommand
>>>>> [DEBUG] - class='io.scif.cli.commands.Show', priority=0.0,
>> enabled=true, pluginType=SCIFIOToolCommand
>>>>> [DEBUG] - class='io.scif.cli.commands.Info', priority=0.0,
>> enabled=true, pluginType=SCIFIOToolCommand
>>>>> [DEBUG] - class='io.scif.cli.commands.Convert', priority=0.0,
>> enabled=true, pluginType=SCIFIOToolCommand
>>>>> [DEBUG] - class='io.scif.ome.commands.OMEXMLToolCommand',
>> priority=0.0, enabled=true, pluginType=SCIFIOToolCommand
>>>>> [DEBUG] - class='io.scif.ome.translators.DefaultOMETranslator',
>> priority=0.0, enabled=true, pluginType=ToOMETranslator
>>>>> [DEBUG] - class='io.scif.ome.services.DefaultOMEXMLService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='io.scif.ome.services.DefaultOMEMetadataService',
>> priority=0.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat', priority=0.0,
>> enabled=true, pluginType=Format
>>>>> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat$OMETranslator',
>> priority=0.0, enabled=true, pluginType=Translator
>>>>> [DEBUG] - class='io.scif.tools.commands.Show', priority=0.0,
>> enabled=true, pluginType=SCIFIOToolCommand
>>>>> [DEBUG] - class='io.scif.tools.commands.Help', priority=0.0,
>> enabled=true, pluginType=SCIFIOToolCommand
>>>>> [DEBUG] - class='io.scif.tools.commands.Info', priority=0.0,
>> enabled=true, pluginType=SCIFIOToolCommand
>>>>> [DEBUG] - class='io.scif.tools.commands.Convert', priority=0.0,
>> enabled=true, pluginType=SCIFIOToolCommand
>>>>> [DEBUG] - class='io.scif.lifesci.SDTFormat', priority=0.0,
>> enabled=true, pluginType=Format
>>>>> [DEBUG] - class='net.imagej.options.OptionsPointTool', menu='Edit >
>> Options > Point Tool...', priority=0.0, enabled=true,
>> pluginType=OptionsPlugin
>>>>> [DEBUG] - class='net.imagej.plugins.commands.debug.PointSetDemo',
>> menu='Plugins > Sandbox > PointSet Demo', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.PowerDataValues',
>> menu='Process > Math > Power...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.app.Preferences', label='Preferences',
>> menu='File > Preferences', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.options.OptionsProfilePlot', menu='Edit >
>> Options > Profile Plot Options...', priority=0.0, enabled=true,
>> pluginType=OptionsPlugin
>>>>> [DEBUG] - class='net.imagej.ops.commands.project.ProjectCommand',
>> menu='Image > Threshold > Project', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.options.OptionsProxy', menu='Edit >
>> Options > Proxy Settings...', priority=0.0, enabled=true,
>> pluginType=OptionsPlugin
>>>>> [DEBUG] - class='net.imagej.app.QuitProgram', label='Quit', menu='File
>>> Quit', iconPath='/icons/commands/door_in.png', priority=0.0,
>> enabled=true, pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.assign.noisereduce.RadialNeighborhoodSpecifier',
>> label='Radial Neighborhood Specification', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.assign.ReciprocalDataValues',
>> menu='Process > Math > Reciprocal...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.assign.noisereduce.RectangularNeighborhoodSpecifier',
>> label='Rectangular Neighborhood Specification', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.display.RemoveOverlay',
>> menu='Image > Overlay > Remove Overlay', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.display.RemoveOverlayReferences',
>> menu='Image > Overlay > Remove Overlay References', priority=0.0,
>> enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.ReorderAxis',
>> menu='Image > Axes > Reorder Axis', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.ReorderData',
>> menu='Image > Data > Reorder Data...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.options.OptionsReset', menu='Edit >
>> Options > Reset', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.ResizeImage',
>> menu='Image > Adjust > Resize...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.ResliceImage',
>> menu='Image > Stacks > Reslice...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.io.RevertImage',
>> menu='File > Revert', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.rotate.Rotate90DegreesLeft', menu='Image
>>> Transform > Rotate 90 Degrees Left', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.rotate.Rotate90DegreesRight',
>> menu='Image > Transform > Rotate 90 Degrees Right', priority=0.0,
>> enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.RotateImageXY',
>> menu='Image > Transform > Rotate...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.options.OptionsRoundedRectangleTool',
>> menu='Edit > Options > Rounded Rect Tool...', priority=0.0, enabled=true,
>> pluginType=OptionsPlugin
>>>>> [DEBUG] - class='org.scijava.plugins.commands.script.RunScript',
>> menu='Plugins > Run Script...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.SaltAndPepper',
>> menu='Process > Noise > Salt and Pepper', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.io.SaveImage', menu='File
>>> Save', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.io.SaveAsImage',
>> menu='File > Save As...', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.ui.swing.script.ScriptEditor', menu='File
>>> New > Script...', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.display.SelectOverlays',
>> menu='Edit > Selection > Select Overlays', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.display.SelectView',
>> menu='Edit > Selection > Select View', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.display.SelectWindow', label='Select
>> Window...', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.legacy.plugin.GetPath', label='Select
>> path', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.axispos.SetActiveAxis',
>> menu='Image > Axes > Set Active Axis...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.axispos.SetAxisPosition',
>> menu='Image > Axes > Set Axis Position...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomSet', label='Set
>> Zoom...', menu='Image > Zoom > Set...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.SetDataValues',
>> menu='Process > Math > Set...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsDemo',
>> menu='Process > Shadows > Shadows Demo', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.correlate.SharpenDataValues',
>> menu='Process > Sharpen', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.misc.ShowInfo',
>> menu='Image > Show Info...', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.display.ShowLUT',
>> menu='Image > Color > Show LUT', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.display.ShowLUTAsTable',
>> menu='Image > Color > Show LUT As Table', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.correlate.SmoothDataValues',
>> menu='Process > Smooth', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsSouth',
>> menu='Process > Shadows > South', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.correlate.ShadowsSoutheast',
>> menu='Process > Shadows > Southeast', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.correlate.ShadowsSouthwest',
>> menu='Process > Shadows > Southwest', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.overlay.SelectionSpecify', menu='Edit >
>> Selection > Specify...', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.display.SpectralComposite', menu='Image
>>> Color > Spectral Composite...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.restructure.SplitChannelsContext',
>> menu='Split Channels', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.tools.SprayCanToolConfig',
>> label='Spray Can Tool', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.assign.SquareRootDataValues',
>> menu='Process > Math > Square Root...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.SquareDataValues',
>> menu='Process > Math > Square...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.animation.StartAnimation', menu='Image >
>> Animation > Start Animation', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.debug.StatisticsDemo',
>> menu='Plugins > Sandbox > Statistics Demo', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.animation.StopAllAnimations',
>> menu='Image > Animation > Stop All Animations', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.animation.StopAnimation',
>> menu='Image > Animation > Stop Animation', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='org.scijava.plugins.commands.debug.ShowSubscribers',
>> menu='Plugins > Debug > Subscribers', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.assign.SubtractFromDataValues',
>> menu='Process > Math > Subtract...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.legacy.plugin.SwitchToLegacyMode',
>> menu='Help > Switch to Legacy Mode', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.display.interactive.SynchronizeWindows',
>> menu='Analyze > Tools > Synchronize Windows',
>> iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='org.scijava.plugins.commands.debug.SystemInformation', menu='Plugins
>>> Debug > System Information', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.debug.TableDemo',
>> menu='Plugins > Sandbox > Table Demo', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='org.scijava.plugins.commands.debug.TextDisplayTest',
>> menu='Plugins > Sandbox > TextDisplayTest', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.updater.PromptUserToUpdate', label='There
>> are updates available', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.display.interactive.Threshold',
>> menu='Image > Adjust > Threshold...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='org.scijava.ui.swing.mdi.WindowsTileVertical',
>> menu='Window > Tile Vertical', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomToSelection',
>> menu='Image > Zoom > To Selection', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.TranslateImage',
>> menu='Image > Transform > Translate...', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionTrimmedMean',
>> menu='Process > Noise > Noise Reduction > Trimmed Mean', priority=0.0,
>> enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.updater.CheckForUpdates',
>> label='Up-to-date check', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.ui.swing.updater.ImageJUpdater',
>> menu='Help > Update...', priority=0.0, enabled=true, pluginType=UpdaterUI
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.upload.SampleImageUploader', menu='Help
>>> Upload Sample Image', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.zoom.Zoom100Percent',
>> menu='Image > Zoom > View 100%', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.options.OptionsWandTool', menu='Edit >
>> Options > Wand Tool...', priority=0.0, enabled=true,
>> pluginType=OptionsPlugin
>>>>> [DEBUG] - class='org.scijava.ui.swing.commands.WatchEvents',
>> menu='Plugins > Debug > Watch Events', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsWest',
>> menu='Process > Shadows > West', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.plugins.commands.assign.XorDataValuesWith', menu='Process
>>> Math > XOR...', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomIn', label='Zoom
>> In', menu='Image > Zoom > In', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomOut',
>> label='Zoom Out', menu='Image > Zoom > Out', priority=0.0, enabled=true,
>> pluginType=Command
>>>>> [DEBUG] -
>> class='net.imagej.ui.swing.script.TextEditor$BeanshellHighlighter',
>> label='beanshell', priority=0.0, enabled=true, pluginType=SyntaxHighlighter
>>>>> [DEBUG] -
>> class='net.imagej.ui.swing.script.TextEditor$ECMAScriptHighlighter',
>> label='ecmascript', priority=0.0, enabled=true, pluginType=SyntaxHighlighter
>>>>> [DEBUG] -
>> class='net.imagej.ui.swing.script.TextEditor$IJ1MacroHighlighter',
>> label='ij1-macro', priority=0.0, enabled=true, pluginType=SyntaxHighlighter
>>>>> [DEBUG] -
>> class='net.imagej.ui.swing.script.TextEditor$MatlabHighlighter',
>> label='matlab', priority=0.0, enabled=true, pluginType=SyntaxHighlighter
>>>>> [DEBUG] - class='net.imagej.plugins.commands.app.EasterEgg', label='|
>> It's a secret to everyone |', priority=0.0, enabled=true, pluginType=Command
>>>>> [DEBUG] - class='io.scif.formats.APNGFormat', name='Animated PNG',
>> priority=0.0, enabled=true, pluginType=Format
>>>>> [DEBUG] - class='io.scif.img.converters.ArrayDataAccessConverter',
>> name='ArrayDataAccess', priority=0.0, enabled=true,
>> pluginType=PlaneConverter
>>>>> [DEBUG] - class='io.scif.formats.AVIFormat', name='Audio Video
>> Interleave', priority=0.0, enabled=true, pluginType=Format
>>>>> [DEBUG] - class='net.imagej.plugins.tools.AxisPositionHandler',
>> name='Axis Position Shortcuts', priority=0.0, enabled=true, pluginType=Tool
>>>>> [DEBUG] -
>> class='org.scijava.plugins.scripting.beanshell.BeanshellScriptLanguage',
>> name='BeanShell', priority=0.0, enabled=true, pluginType=ScriptLanguage
>>>>> [DEBUG] -
>> class='org.scijava.plugins.scripting.clojure.ClojureScriptLanguage',
>> name='Clojure', priority=0.0, enabled=true, pluginType=ScriptLanguage
>>>>> [DEBUG] -
>> class='net.imagej.autoscale.ConfidenceIntervalAutoscaleMethod',
>> name='Confidence Interval', priority=0.0, enabled=true,
>> pluginType=AutoscaleMethod
>>>>> [DEBUG] - class='net.imagej.plugins.tools.ContextMenuHandler',
>> name='Context Menus', priority=0.0, enabled=true, pluginType=Tool
>>>>> [DEBUG] - class='io.scif.formats.DICOMFormat', name='DICOM',
>> priority=0.0, enabled=true, pluginType=Format
>>>>> [DEBUG] - class='net.imagej.autoscale.DefaultAutoscaleMethod',
>> name='Default', priority=0.0, enabled=true, pluginType=AutoscaleMethod
>>>>> [DEBUG] - class='net.imagej.threshold.DefaultThresholdMethod',
>> name='Default', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>>>> [DEBUG] - class='io.scif.img.converters.RandomAccessConverter',
>> name='Default', priority=0.0, enabled=true, pluginType=PlaneConverter
>>>>> [DEBUG] - class='io.scif.formats.EPSFormat', name='Encapsulated
>> PostScript', priority=0.0, enabled=true, pluginType=Format
>>>>> [DEBUG] - class='io.scif.formats.FITSFormat', name='Flexible Image
>> Transport System', priority=0.0, enabled=true, pluginType=Format
>>>>> [DEBUG] - class='io.scif.formats.GIFFormat', name='Graphics
>> Interchange Format', priority=0.0, enabled=true, pluginType=Format
>>>>> [DEBUG] -
>> class='org.scijava.plugins.scripting.groovy.GroovyScriptLanguage',
>> name='Groovy', priority=0.0, enabled=true, pluginType=ScriptLanguage
>>>>> [DEBUG] - class='net.imagej.threshold.HuangThresholdMethod',
>> name='Huang', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>>>> [DEBUG] - class='net.imagej.legacy.plugin.IJ1MacroLanguage', name='IJ1
>> Macro', priority=0.0, enabled=true, pluginType=ScriptLanguage
>>>>> [DEBUG] - class='io.scif.formats.ICSFormat', name='Image Cytometry
>> Standard', priority=0.0, enabled=true, pluginType=Format
>>>>> [DEBUG] - class='net.imagej.legacy.LegacyImageJApp', name='ImageJ1',
>> priority=0.0, enabled=true, pluginType=App
>>>>> [DEBUG] - class='net.imagej.threshold.IntermodesThresholdMethod',
>> name='Intermodes', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>>>> [DEBUG] - class='net.imagej.threshold.IsoDataThresholdMethod',
>> name='IsoData', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>>>> [DEBUG] - class='io.scif.formats.JPEGFormat', name='JPEG',
>> priority=0.0, enabled=true, pluginType=Format
>>>>> [DEBUG] - class='io.scif.formats.JPEG2000Format', name='JPEG-2000',
>> priority=0.0, enabled=true, pluginType=Format
>>>>> [DEBUG] -
>> class='org.scijava.plugins.scripting.java.JavaScriptLanguage', name='Java',
>> priority=0.0, enabled=true, pluginType=ScriptLanguage
>>>>> [DEBUG] - class='io.scif.formats.JavaFormat', name='Java source code',
>> priority=0.0, enabled=true, pluginType=Format
>>>>> [DEBUG] -
>> class='org.scijava.plugins.scripting.javascript.JavaScriptScriptLanguage',
>> name='JavaScript', priority=0.0, enabled=true, pluginType=ScriptLanguage
>>>>> [DEBUG] - class='net.imagej.threshold.LiThresholdMethod', name='Li',
>> priority=0.0, enabled=true, pluginType=ThresholdMethod
>>>>> [DEBUG] - class='org.scijava.plugins.platforms.macosx.MacOSXPlatform',
>> name='Mac OS X', priority=0.0, enabled=true, pluginType=Platform
>>>>> [DEBUG] - class='net.imagej.threshold.MaxEntropyThresholdMethod',
>> name='MaxEntropy', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>>>> [DEBUG] - class='net.imagej.threshold.MaxLikelihoodThresholdMethod',
>> name='MaxLikelihood', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>>>> [DEBUG] - class='net.imagej.threshold.MeanThresholdMethod',
>> name='Mean', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>>>> [DEBUG] - class='io.scif.formats.MicromanagerFormat',
>> name='Micro-Manager', priority=0.0, enabled=true, pluginType=Format
>>>>> [DEBUG] - class='net.imagej.threshold.MinErrorThresholdMethod',
>> name='MinError(I)', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>>>> [DEBUG] - class='net.imagej.threshold.MinimumThresholdMethod',
>> name='Minimum', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>>>> [DEBUG] - class='net.imagej.threshold.MomentsThresholdMethod',
>> name='Moments', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>>>> [DEBUG] - class='io.scif.formats.MNGFormat', name='Multiple Network
>> Graphics', priority=0.0, enabled=true, pluginType=Format
>>>>> [DEBUG] - class='io.scif.formats.NRRDFormat', name='NRRD',
>> priority=0.0, enabled=true, pluginType=Format
>>>>> [DEBUG] - class='io.scif.formats.OBFFormat', name='OBF', priority=0.0,
>> enabled=true, pluginType=Format
>>>>> [DEBUG] - class='net.imagej.threshold.OtsuThresholdMethod',
>> name='Otsu', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>>>> [DEBUG] - class='io.scif.formats.PCXFormat', name='PCX', priority=0.0,
>> enabled=true, pluginType=Format
>>>>> [DEBUG] - class='io.scif.formats.qt.PICTFormat', name='PICT',
>> priority=0.0, enabled=true, pluginType=Format
>>>>> [DEBUG] - class='net.imagej.plugins.tools.PanActivator', name='Pan
>> Activator', priority=0.0, enabled=true, pluginType=Tool
>>>>> [DEBUG] - class='net.imagej.threshold.PercentileThresholdMethod',
>> name='Percentile', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>>>> [DEBUG] - class='io.scif.img.converters.PlanarAccessConverter',
>> name='PlanarAccess', priority=0.0, enabled=true, pluginType=PlaneConverter
>>>>> [DEBUG] - class='io.scif.formats.PGMFormat', name='Portable Gray Map',
>> priority=0.0, enabled=true, pluginType=Format
>>>>> [DEBUG] - class='net.imagej.plugins.tools.PixelProbe', name='Probe',
>> priority=0.0, enabled=true, pluginType=Tool
>>>>> [DEBUG] -
>> class='org.scijava.plugins.scripting.jython.JythonScriptLanguage',
>> name='Python', priority=0.0, enabled=true, pluginType=ScriptLanguage
>>>>> [DEBUG] - class='io.scif.formats.qt.NativeQTFormat', name='QuickTime',
>> priority=0.0, enabled=true, pluginType=Format
>>>>> [DEBUG] - class='net.imagej.threshold.RenyiEntropyThresholdMethod',
>> name='RenyiEntropy', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>>>> [DEBUG] -
>> class='org.scijava.plugins.scripting.jruby.JRubyScriptLanguage',
>> name='Ruby', priority=0.0, enabled=true, pluginType=ScriptLanguage
>>>>> [DEBUG] - class='io.scif.app.SCIFIOApp', name='SCIFIO', priority=0.0,
>> enabled=true, pluginType=App
>>>>> [DEBUG] - class='net.imagej.threshold.ShanbhagThresholdMethod',
>> name='Shanbhag', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>>>> [DEBUG] - class='io.scif.formats.FakeFormat', name='Simulated data',
>> priority=0.0, enabled=true, pluginType=Format
>>>>> [DEBUG] - class='io.scif.formats.TextFormat', name='Text',
>> priority=0.0, enabled=true, pluginType=Format
>>>>> [DEBUG] - class='net.imagej.threshold.TriangleThresholdMethod',
>> name='Triangle', priority=0.0, enabled=true, pluginType=ThresholdMethod
>>>>> [DEBUG] - class='net.imagej.plugins.tools.FocusHandler', name='Window
>> Focus', priority=0.0, enabled=true, pluginType=Tool
>>>>> [DEBUG] -
>> class='org.scijava.plugins.platforms.windows.WindowsPlatform',
>> name='Windows', priority=0.0, enabled=true, pluginType=Platform
>>>>> [DEBUG] - class='io.scif.formats.BMPFormat', name='Windows Bitmap',
>> priority=0.0, enabled=true, pluginType=Format
>>>>> [DEBUG] - class='net.imagej.threshold.YenThresholdMethod', name='Yen',
>> priority=0.0, enabled=true, pluginType=ThresholdMethod
>>>>> [DEBUG] - class='io.scif.formats.ZipFormat', name='Zip', priority=0.0,
>> enabled=true, pluginType=Format
>>>>> [DEBUG] - class='net.imagej.plugins.tools.ZoomHandler', name='Zoom
>> Shortcuts', priority=0.0, enabled=true, pluginType=Tool
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealAbs',
>> name='abs', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.arithmetic.add.AddConstantToImageInPlace',
>> name='add', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.arithmetic.add.AddRandomAccessibleIntervalToIterableInterval',
>> name='add', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.arithmetic.add.AddConstantToPlanarDoubleImage',
>> name='add', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealAddConstant',
>> name='addconstant', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealAddNoise',
>> name='addnoise', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealAndConstant',
>> name='andconstant', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccos',
>> name='arccos', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealArccosh',
>> name='arccosh', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccot',
>> name='arccot', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealArccoth',
>> name='arccoth', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccsc',
>> name='arccsc', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealArccsch',
>> name='arccsch', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArcsec',
>> name='arcsec', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealArcsech',
>> name='arcsech', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArcsin',
>> name='arcsin', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealArcsinh',
>> name='arcsinh', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArctan',
>> name='arctan', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealArctanh',
>> name='arctanh', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.ascii.DefaultASCII', name='ascii',
>> priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCeil',
>> name='ceil', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.chunker.DefaultChunker',
>> name='chunker', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealConstant',
>> name='constant', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.convert.ConvertPixClip',
>> name='convert', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.convert.ConvertII', name='convert',
>> priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.convert.ConvertPixNormalizeScale',
>> name='convert', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.convert.ConvertPixScale',
>> name='convert', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.convert.ConvertPixCopy',
>> name='convert', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.convolve.ConvolveNaive',
>> name='convolve', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.convolve.ConvolveFourier',
>> name='convolve', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCopy',
>> name='copy', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCos',
>> name='cos', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCosh',
>> name='cosh', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCot',
>> name='cot', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCoth',
>> name='coth', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.create.CreateArrayImg', name='create',
>> priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCsc',
>> name='csc', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCsch',
>> name='csch', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealCubeRoot',
>> name='cuberoot', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealDivideConstant',
>> name='divideconstant', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.equation.DefaultEquation',
>> name='equation', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealExp',
>> name='exp', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealExpMinusOne',
>> name='expminusone', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealFloor',
>> name='floor', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealGammaConstant',
>> name='gammaconstant', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.gauss.GaussRAI2RAI', name='gauss',
>> priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealGaussianRandom',
>> name='gaussianrandom', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.identity.DefaultIdentity',
>> name='identity', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealInvert',
>> name='invert', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinInplaceAndInplace',
>> name='join', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinInplaceAndFunction',
>> name='join', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinFunctionAndFunction',
>> name='join', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinInplaceFunctions',
>> name='join', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinFunctionAndInplace',
>> name='join', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinFunctions',
>> name='join', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealLog',
>> name='log', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealLog10',
>> name='log10', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealLog2',
>> name='log2', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealLogOnePlusX',
>> name='logoneplusx', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.lookup.DefaultLookup', name='lookup',
>> aliases='op', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.loop.DefaultLoopInplace', name='loop',
>> priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.loop.DefaultLoopFunction',
>> name='loop', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.threshold.Manual',
>> name='manualthreshold', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.map.MapRA2View', name='map',
>> priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.map.MapRAI2View', name='map',
>> priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.map.MapII2View', name='map',
>> priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealMaxConstant',
>> name='maxconstant', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealMinConstant',
>> name='minconstant', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.misc.MinMaxRealType', name='minmax',
>> priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.statistics.moments.Moment2AboutMean',
>> name='moment1aboutmean', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.statistics.moments.Moment1AboutMean',
>> name='moment1aboutmean', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealMultiplyConstant',
>> name='multiplyconstant', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealNearestInt',
>> name='nearestint', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealNegate',
>> name='negate', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.normalize.NormalizeRealType',
>> name='normalize', aliases='norm', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.normalize.NormalizeII',
>> name='normalize', aliases='norm', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealOrConstant',
>> name='orconstant', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.threshold.Otsu', name='otsu',
>> priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealPowerConstant',
>> name='powerconstant', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealReciprocal',
>> name='reciprocal', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealRound',
>> name='round', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.scale.ScaleImg', name='scale',
>> aliases='norm', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSec',
>> name='sec', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSech',
>> name='sech', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSignum',
>> name='signum', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSin',
>> name='sin', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSinc',
>> name='sinc', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSincPi',
>> name='sincpi', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSinh',
>> name='sinh', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSqr',
>> name='sqr', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSqrt',
>> name='sqrt', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealStep',
>> name='step', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealSubtractConstant',
>> name='subtractconstant', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='org.scijava.ui.swing.sdi.SwingSDIUI', name='swing',
>> priority=0.0, enabled=true, pluginType=UserInterface
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealTan',
>> name='tan', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealTanh',
>> name='tanh', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.threshold.PixThreshold',
>> name='threshold', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.threshold.GlobalThreshold',
>> name='threshold', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.threshold.LocalThreshold',
>> name='threshold', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealUlp',
>> name='ulp', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealUniformRandom',
>> name='uniformrandom', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] -
>> class='net.imagej.ops.generated.arithmetic.real.RealXorConstant',
>> name='xorconstant', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealZero',
>> name='zero', priority=0.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='fiji.plugin.trackmate.tracking.ManualTrackerFactory',
>> priority=-1.0, enabled=true, pluginType=SpotTrackerFactory
>>>>> [DEBUG] - class='net.imagej.ops.map.ParallelMap', name='map',
>> priority=-95.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.map.ParallelMapI2I', name='map',
>> priority=-97.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.map.ParallelMapI2R', name='map',
>> priority=-98.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.crop.CropImgPlus', name='crop',
>> aliases='slice', priority=-99.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.crop.CropLabeling', name='crop',
>> aliases='slice', priority=-99.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.map.MapII2II', name='map',
>> priority=-99.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.project.parallel.DefaultProjectP',
>> name='project', priority=-99.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.statistics.StdDevRealTypeDirect',
>> name='stddev', priority=-99.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.statistics.VarianceRealTypeDirect',
>> name='variance', priority=-99.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='org.scijava.ui.dnd.FileDragAndDropHandler',
>> priority=-100.0, enabled=true, pluginType=DragAndDropHandler
>>>>> [DEBUG] - class='org.scijava.display.DefaultTextDisplay',
>> priority=-100.0, enabled=true, pluginType=Display
>>>>> [DEBUG] - class='org.scijava.log.StderrLogService', priority=-100.0,
>> enabled=true, pluginType=Service
>>>>> [DEBUG] - class='org.scijava.platform.DefaultAppEventService',
>> priority=-100.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.display.DummyScreenCaptureService',
>> priority=-100.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.render.DummyRenderingService',
>> priority=-100.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='net.imagej.io.DatasetIOPlugin', priority=-100.0,
>> enabled=true, pluginType=IOPlugin
>>>>> [DEBUG] - class='io.scif.formats.APNGFormat$APNGTranslator',
>> priority=-100.0, enabled=true, pluginType=Translator
>>>>> [DEBUG] -
>> class='io.scif.formats.qt.NativeQTFormat$NativeQTTranslator',
>> priority=-100.0, enabled=true, pluginType=Translator
>>>>> [DEBUG] - class='io.scif.formats.FakeFormat$FakeTranslator',
>> priority=-100.0, enabled=true, pluginType=Translator
>>>>> [DEBUG] -
>> class='io.scif.formats.MicromanagerFormat$MicromanagerTranslator',
>> priority=-100.0, enabled=true, pluginType=Translator
>>>>> [DEBUG] - class='io.scif.services.DefaultInitializeService',
>> priority=-100.0, enabled=true, pluginType=Service
>>>>> [DEBUG] - class='io.scif.formats.AVIFormat$Translator',
>> priority=-100.0, enabled=true, pluginType=Translator
>>>>> [DEBUG] - class='io.scif.formats.ICSFormat$ICSTranslator',
>> priority=-100.0, enabled=true, pluginType=Translator
>>>>> [DEBUG] - class='io.scif.formats.EPSFormat$EPSTranslator',
>> priority=-100.0, enabled=true, pluginType=Translator
>>>>> [DEBUG] - class='io.scif.formats.ImageIOFormat$ImageIOTranslator',
>> priority=-100.0, enabled=true, pluginType=Translator
>>>>> [DEBUG] -
>> class='io.scif.formats.qt.LegacyQTFormat$LegacyQTTranslator',
>> priority=-100.0, enabled=true, pluginType=Translator
>>>>> [DEBUG] - class='net.imagej.legacy.plugin.DefaultLegacyOpener',
>> priority=-100.0, enabled=true, pluginType=LegacyOpener
>>>>> [DEBUG] - class='net.imagej.legacy.plugin.DefaultLegacyEditor',
>> priority=-100.0, enabled=true, pluginType=LegacyEditor
>>>>> [DEBUG] - class='org.scijava.plugins.scripting.java.MainJavaRunner',
>> priority=-100.0, enabled=true, pluginType=JavaRunner
>>>>> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat$OMEXMLTranslator',
>> priority=-100.0, enabled=true, pluginType=Translator
>>>>> [DEBUG] - class='io.scif.formats.qt.LegacyQTFormat', name='QuickTime',
>> priority=-100.0, enabled=true, pluginType=Format
>>>>> [DEBUG] - class='org.scijava.app.SciJavaApp', name='SciJava',
>> priority=-100.0, enabled=true, pluginType=App
>>>>> [DEBUG] - class='io.scif.formats.JPEGTileFormat', name='Tile JPEG',
>> priority=-100.0, enabled=true, pluginType=Format
>>>>> [DEBUG] -
>> class='net.imagej.ops.arithmetic.add.AddConstantToNumericType', name='add',
>> priority=-100.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='org.scijava.ui.awt.AWTUI', name='awt',
>> priority=-100.0, enabled=true, pluginType=UserInterface
>>>>> [DEBUG] - class='net.imagej.ops.crop.CropRAI', name='crop',
>> aliases='slice', priority=-100.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.map.MapII2RAI', name='map',
>> priority=-100.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.map.MapRAI2III', name='map',
>> priority=-100.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.map.MapI', name='map',
>> priority=-100.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.neighborhood.MapNeighborhood',
>> name='map', priority=-100.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.statistics.MaxRealType', name='max',
>> priority=-100.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.statistics.MeanRealType', name='mean',
>> priority=-100.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.statistics.MedianRealType',
>> name='median', priority=-100.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.statistics.MinRealType', name='min',
>> priority=-100.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.project.ProjectRAI2II',
>> name='project', priority=-100.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.misc.SizeIterableInterval',
>> name='size', priority=-100.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.statistics.StdDevRealType',
>> name='stddev', priority=-100.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.statistics.SumRealType', name='sum',
>> priority=-100.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='org.scijava.ui.swing.mdi.SwingMdiUI',
>> name='swing-mdi', priority=-100.0, enabled=true, pluginType=UserInterface
>>>>> [DEBUG] - class='net.imagej.ops.statistics.VarianceRealType',
>> name='variance', priority=-100.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='org.scijava.text.io.TextIOPlugin', priority=-101.0,
>> enabled=true, pluginType=IOPlugin
>>>>> [DEBUG] - class='net.imagej.ops.map.MapI2I', name='map',
>> priority=-101.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.plugins.tools.WandTool', name='Wand',
>> description='Wand (tracing) tool', iconPath='/icons/tools/wand.png',
>> priority=-110.0, enabled=false, pluginType=Tool
>>>>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingTextTool',
>> name='Text', description='Text tool', iconPath='/icons/tools/text.png',
>> priority=-115.0, enabled=false, pluginType=Tool
>>>>> [DEBUG] - class='net.imagej.plugins.tools.ZoomTool', name='Zoom',
>> description='Magnifying glass (or use "+" and "-" keys)',
>> iconPath='/icons/tools/zoom.png', priority=-200.0, enabled=true,
>> pluginType=Tool
>>>>> [DEBUG] - class='net.imagej.plugins.tools.PanTool', name='Pan',
>> description='Scrolling tool (or press space bar and drag)',
>> iconPath='/icons/tools/pan.png', priority=-201.0, enabled=true,
>> pluginType=Tool
>>>>> [DEBUG] - class='net.imagej.plugins.tools.PaintBrushTool',
>> name='Paintbrush', description='Paintbrush Tool',
>> iconPath='/icons/tools/paintbrush.png', priority=-300.0, enabled=true,
>> pluginType=Tool
>>>>> [DEBUG] - class='net.imagej.plugins.tools.PencilTool', name='Pencil',
>> description='Pencil Tool', iconPath='/icons/tools/pencil.png',
>> priority=-301.0, enabled=true, pluginType=Tool
>>>>> [DEBUG] - class='net.imagej.plugins.tools.SprayCanTool',
>> name='SprayCan', label='Spray Can', description='Spray Can Tool',
>> iconPath='/icons/tools/spray-can.png', priority=-303.0, enabled=true,
>> pluginType=Tool
>>>>> [DEBUG] - class='net.imagej.plugins.tools.FloodFillTool',
>> name='FloodFill', label='Flood Fill', description='Flood Fill Tool',
>> iconPath='/icons/tools/flood-fill.png', priority=-304.0, enabled=true,
>> pluginType=Tool
>>>>> [DEBUG] - class='net.imagej.plugins.tools.ArrowTool', name='Arrow',
>> description='Arrow Tool', iconPath='/icons/tools/arrow.png',
>> priority=-305.0, enabled=false, pluginType=Tool
>>>>> [DEBUG] - class='net.imagej.plugins.tools.FgColorTool',
>> name='Foreground', iconPath='/icons/tools/blank.png', priority=-500.0,
>> enabled=true, pluginType=Tool
>>>>> [DEBUG] - class='net.imagej.plugins.tools.BgColorTool',
>> name='Background', iconPath='/icons/tools/blankBlack.png', priority=-501.0,
>> enabled=true, pluginType=Tool
>>>>> [DEBUG] - class='io.scif.ome.formats.OMETIFFFormat', priority=-9998.0,
>> enabled=true, pluginType=Format
>>>>> [DEBUG] - class='io.scif.ome.formats.OMETIFFFormat$OMETIFFTranslator',
>> priority=-9998.0, enabled=true, pluginType=Translator
>>>>> [DEBUG] - class='org.scijava.module.process.LoadInputsPreprocessor',
>> priority=-9999.0, enabled=true, pluginType=PreprocessorPlugin
>>>>> [DEBUG] - class='io.scif.formats.TIFFFormat$TIFFTranslator',
>> priority=-9999.0, enabled=true, pluginType=Translator
>>>>> [DEBUG] - class='io.scif.formats.TIFFFormat', name='Tagged Image File
>> Format', priority=-9999.0, enabled=true, pluginType=Format
>>>>> [DEBUG] - class='org.scijava.ui.FilePreprocessor', priority=-9999.5,
>> enabled=true, pluginType=PreprocessorPlugin
>>>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTInputHarvester',
>> priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin
>>>>> [DEBUG] - class='org.scijava.plugins.text.plain.PlainTextFormat',
>> priority=-10000.0, enabled=true, pluginType=TextFormat
>>>>> [DEBUG] - class='org.scijava.display.DisplayPostprocessor',
>> priority=-10000.0, enabled=true, pluginType=PostprocessorPlugin
>>>>> [DEBUG] - class='io.scif.DefaultTranslator', priority=-10000.0,
>> enabled=true, pluginType=Translator
>>>>> [DEBUG] - class='net.imagej.legacy.ui.LegacyInputHarvester',
>> priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin
>>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingInputHarvester',
>> priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin
>>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingMdiInputHarvester',
>> priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin
>>>>> [DEBUG] - class='net.imagej.ui.swing.overlay.DefaultJHotDrawAdapter',
>> priority=-10000.0, enabled=true, pluginType=JHotDrawAdapter
>>>>> [DEBUG] - class='org.scijava.platform.DefaultPlatform',
>> name='Default', priority=-10000.0, enabled=true, pluginType=Platform
>>>>> [DEBUG] - class='net.imagej.plugins.tools.AcceleratorHandler',
>> name='Keyboard Shortcuts', priority=-10000.0, enabled=true, pluginType=Tool
>>>>> [DEBUG] - class='io.scif.formats.MinimalTIFFFormat', name='Minimal
>> TIFF', priority=-10000.0, enabled=true, pluginType=Format
>>>>> [DEBUG] -
>> class='net.imagej.ops.arithmetic.add.AddConstantToImageFunctional',
>> name='add', priority=-10000.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='net.imagej.ops.chunker.InterleavedChunker',
>> name='chunker', priority=-10000.0, enabled=true, pluginType=Op
>>>>> [DEBUG] - class='org.scijava.module.process.CheckInputsPreprocessor',
>> priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin
>>>>> [DEBUG] - class='org.scijava.module.process.SaveInputsPreprocessor',
>> priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin
>>>>> [DEBUG] - class='io.scif.formats.TIFFJAIFormat', name='Tagged Image
>> File Format', priority=-10001.0, enabled=true, pluginType=Format
>>>>> [DEBUG] - class='net.imagej.ops.misc.SizeIterable', name='size',
>> priority=-Infinity, enabled=true, pluginType=Op
>>>>> [DEBUG] Created service 'org.scijava.plugin.DefaultPluginService' in
>> 51 ms
>>>>> [DEBUG] Creating service: org.scijava.object.DefaultObjectService
>>>>> log4j:WARN No appenders could be found for logger
>> (org.bushe.swing.event.EventService).
>>>>> log4j:WARN Please initialize the log4j system properly.
>>>>> log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig
>> for more info.
>>>>> [DEBUG] Created service 'org.scijava.object.DefaultObjectService' in
>> 72 ms
>>>>> [DEBUG] Creating service: org.scijava.module.DefaultModuleService
>>>>> [DEBUG] Creating service: org.scijava.prefs.DefaultPrefService
>>>>> [DEBUG] Created service 'org.scijava.prefs.DefaultPrefService' in 4 ms
>>>>> [DEBUG] Creating service: org.scijava.convert.DefaultConvertService
>>>>> [DEBUG] Created service 'org.scijava.convert.DefaultConvertService' in
>> 4 ms
>>>>> [DEBUG] Created service 'org.scijava.module.DefaultModuleService' in
>> 14 ms
>>>>> [DEBUG] Creating service: org.scijava.command.DefaultCommandService
>>>>> [DEBUG] Created service 'org.scijava.command.DefaultCommandService' in
>> 36 ms
>>>>> [DEBUG] Created service 'org.scijava.script.DefaultScriptService' in
>> 184 ms
>>>>> [DEBUG] Creating service: net.imagej.lut.DefaultLUTService
>>>>> [DEBUG] Creating service: net.imagej.DefaultDatasetService
>>>>> [DEBUG] Creating service: io.scif.services.DefaultFormatService
>>>>> [DEBUG] Created service 'io.scif.services.DefaultFormatService' in 3 ms
>>>>> [DEBUG] Creating service: net.imagej.types.DefaultDataTypeService
>>>>> [INFO] Found 11 DataType plugins.
>>>>> [DEBUG] Created service 'net.imagej.types.DefaultDataTypeService' in
>> 40 ms
>>>>> [DEBUG] Created service 'net.imagej.DefaultDatasetService' in 61 ms
>>>>> [DEBUG] Creating service: org.scijava.display.DefaultDisplayService
>>>>> [DEBUG] Created service 'org.scijava.display.DefaultDisplayService' in
>> 5 ms
>>>>> [DEBUG] Creating service: net.imagej.display.DefaultImageDisplayService
>>>>> [DEBUG] Created service
>> 'net.imagej.display.DefaultImageDisplayService' in 3 ms
>>>>> [DEBUG] Created service 'net.imagej.lut.DefaultLUTService' in 74 ms
>>>>> [DEBUG] Creating service: net.imagej.legacy.DefaultLegacyService
>>>>> [DEBUG] Creating service: net.imagej.display.DefaultOverlayService
>>>>> [DEBUG] Creating service: org.scijava.options.DefaultOptionsService
>>>>> [DEBUG] Created service 'org.scijava.options.DefaultOptionsService' in
>> 2 ms
>>>>> [DEBUG] Creating service: net.imagej.ui.awt.AWTRenderingService
>>>>> [DEBUG] Created service 'net.imagej.ui.awt.AWTRenderingService' in 1 ms
>>>>> [DEBUG] Created service 'net.imagej.display.DefaultOverlayService' in
>> 10 ms
>>>>> [DEBUG] Creating service: net.imagej.threshold.DefaultThresholdService
>>>>> [DEBUG] Created service 'net.imagej.threshold.DefaultThresholdService'
>> in 4 ms
>>>>> [DEBUG] Creating service: org.scijava.menu.DefaultMenuService
>>>>> [DEBUG] Created service 'org.scijava.menu.DefaultMenuService' in 3 ms
>>>>> [DEBUG] Creating service: org.scijava.app.DefaultStatusService
>>>>> [DEBUG] Creating service: org.scijava.app.DefaultAppService
>>>>> [DEBUG] Created service 'org.scijava.app.DefaultAppService' in 4 ms
>>>>> [DEBUG] Created service 'org.scijava.app.DefaultStatusService' in 5 ms
>>>>> [INFO] Found 8 ScriptLanguage plugins.
>>>>> [INFO] Found 0 scripts
>>>>> [INFO] Overriding Upload Sample Image; identifier:
>> command:net.imagej.plugins.commands.upload.SampleImageUploader; jar:
>> file:/opt/Fiji.app/jars/imagej-plugins-commands-0.2.6.jar
>>>>> [INFO] Overriding Test FlowCam; identifier:
>> script:/opt/Fiji.app/plugins/FlowCam/Test_FlowCam.ijm; jar:
>> file:/opt/Fiji.app/jars/scijava-common-2.33.0.jar
>>>>> [DEBUG] Created service 'net.imagej.legacy.DefaultLegacyService' in
>> 685 ms
>>>>> [DEBUG] Creating service: fiji.DefaultFijiService
>>>>> [DEBUG] Created service 'fiji.DefaultFijiService' in 1 ms
>>>>> [DEBUG] Creating service: net.imglib2.meta.units.DefaultUnitService
>>>>> [DEBUG] Created service 'net.imglib2.meta.units.DefaultUnitService' in
>> 44 ms
>>>>> [DEBUG] Creating service: net.imagej.ui.awt.AWTScreenCaptureService
>>>>> [DEBUG] Created service 'net.imagej.ui.awt.AWTScreenCaptureService' in
>> 2 ms
>>>>> [DEBUG] Creating service: org.scijava.input.DefaultInputService
>>>>> [DEBUG] Created service 'org.scijava.input.DefaultInputService' in 6 ms
>>>>> [DEBUG] Creating service: org.scijava.ui.DefaultUIService
>>>>> [DEBUG] Creating service: org.scijava.platform.DefaultPlatformService
>>>>> [DEBUG] Creating service: org.scijava.platform.DefaultAppEventService
>>>>> [DEBUG] Created service 'org.scijava.platform.DefaultAppEventService'
>> in 2 ms
>>>>> [INFO] Found 1 Platform plugins.
>>>>> [DEBUG] Configuring platform: org.scijava.platform.DefaultPlatform
>>>>> [DEBUG] Created service 'org.scijava.platform.DefaultPlatformService'
>> in 11 ms
>>>>> [DEBUG] Creating service: org.scijava.tool.DefaultToolService
>>>>> [DEBUG] Created service 'org.scijava.tool.DefaultToolService' in 5 ms
>>>>> [DEBUG] Created service 'org.scijava.ui.DefaultUIService' in 23 ms
>>>>> [DEBUG] Creating service: org.scijava.ui.dnd.DefaultDragAndDropService
>>>>> [DEBUG] Created service 'org.scijava.ui.dnd.DefaultDragAndDropService'
>> in 5 ms
>>>>> [DEBUG] Creating service: org.scijava.text.DefaultTextService
>>>>> [DEBUG] Created service 'org.scijava.text.DefaultTextService' in 3 ms
>>>>> [DEBUG] Creating service: org.scijava.io.DefaultRecentFileService
>>>>> [DEBUG] Created service 'org.scijava.io.DefaultRecentFileService' in
>> 61 ms
>>>>> [DEBUG] Creating service: org.scijava.io.DefaultIOService
>>>>> [DEBUG] Created service 'org.scijava.io.DefaultIOService' in 4 ms
>>>>> [DEBUG] Creating service: org.scijava.widget.DefaultWidgetService
>>>>> [INFO] Found 22 InputWidget plugins.
>>>>> [DEBUG] Created service 'org.scijava.widget.DefaultWidgetService' in 6
>> ms
>>>>> [DEBUG] Creating service: org.scijava.welcome.DefaultWelcomeService
>>>>> [DEBUG] Created service 'org.scijava.welcome.DefaultWelcomeService' in
>> 2 ms
>>>>> [DEBUG] Creating service: org.scijava.script.DefaultScriptHeaderService
>>>>> [DEBUG] Created service
>> 'org.scijava.script.DefaultScriptHeaderService' in 2 ms
>>>>> [DEBUG] Creating service: org.scijava.event.DefaultEventHistory
>>>>> [DEBUG] Created service 'org.scijava.event.DefaultEventHistory' in 2 ms
>>>>> [DEBUG] Creating service: org.scijava.console.DefaultConsoleService
>>>>> [DEBUG] Created service 'org.scijava.console.DefaultConsoleService' in
>> 2 ms
>>>>> [DEBUG] Creating service: net.imagej.operator.DefaultCalculatorService
>>>>> [DEBUG] Created service 'net.imagej.operator.DefaultCalculatorService'
>> in 2 ms
>>>>> [DEBUG] Creating service: net.imagej.autoscale.DefaultAutoscaleService
>>>>> [DEBUG] Created service 'net.imagej.autoscale.DefaultAutoscaleService'
>> in 3 ms
>>>>> [DEBUG] Creating service: net.imagej.sampler.DefaultSamplerService
>>>>> [DEBUG] Created service 'net.imagej.sampler.DefaultSamplerService' in
>> 3 ms
>>>>> [DEBUG] Creating service: net.imagej.display.DefaultZoomService
>>>>> [DEBUG] Created service 'net.imagej.display.DefaultZoomService' in 2 ms
>>>>> [DEBUG] Creating service: net.imagej.display.DefaultWindowService
>>>>> [DEBUG] Created service 'net.imagej.display.DefaultWindowService' in 2
>> ms
>>>>> [DEBUG] Creating service: net.imagej.DefaultImgPlusService
>>>>> [DEBUG] Created service 'net.imagej.DefaultImgPlusService' in 1 ms
>>>>> [DEBUG] Creating service: net.imagej.ui.DefaultImageJUIService
>>>>> [DEBUG] Created service 'net.imagej.ui.DefaultImageJUIService' in 1 ms
>>>>> [DEBUG] Creating service: net.imagej.measure.DefaultStatisticsService
>>>>> [DEBUG] Created service 'net.imagej.measure.DefaultStatisticsService'
>> in 3 ms
>>>>> [DEBUG] Creating service: net.imagej.measure.DefaultMeasurementService
>>>>> [DEBUG] Created service 'net.imagej.measure.DefaultMeasurementService'
>> in 1 ms
>>>>> [DEBUG] Creating service: net.imagej.animation.DefaultAnimationService
>>>>> [DEBUG] Created service 'net.imagej.animation.DefaultAnimationService'
>> in 4 ms
>>>>> [DEBUG] Creating service: io.scif.io.DefaultNIOService
>>>>> [DEBUG] Created service 'io.scif.io.DefaultNIOService' in 2 ms
>>>>> [DEBUG] Creating service:
>> io.scif.img.converters.DefaultPlaneConverterService
>>>>> [DEBUG] Created service
>> 'io.scif.img.converters.DefaultPlaneConverterService' in 6 ms
>>>>> [DEBUG] Creating service: io.scif.img.DefaultImgUtilityService
>>>>> [DEBUG] Created service 'io.scif.img.DefaultImgUtilityService' in 5 ms
>>>>> [DEBUG] Creating service: io.scif.gui.DefaultGUIService
>>>>> [DEBUG] Created service 'io.scif.gui.DefaultGUIService' in 3 ms
>>>>> [DEBUG] Creating service: io.scif.xml.DefaultXMLService
>>>>> [DEBUG] Created service 'io.scif.xml.DefaultXMLService' in 22 ms
>>>>> [DEBUG] Creating service: io.scif.refs.DefaultRefManagerService
>>>>> [DEBUG] Created service 'io.scif.refs.DefaultRefManagerService' in 1 ms
>>>>> [DEBUG] Creating service: io.scif.services.DefaultTranslatorService
>>>>> [DEBUG] Created service 'io.scif.services.DefaultTranslatorService' in
>> 2 ms
>>>>> [DEBUG] Creating service: io.scif.codec.DefaultCodecService
>>>>> [DEBUG] Created service 'io.scif.codec.DefaultCodecService' in 1 ms
>>>>> [DEBUG] Creating service: io.scif.img.cell.cache.MapDBCache
>>>>> [DEBUG] Created service 'io.scif.img.cell.cache.MapDBCache' in 8 ms
>>>>> [DEBUG] Creating service: io.scif.DefaultMetadataService
>>>>> [DEBUG] Created service 'io.scif.DefaultMetadataService' in 0 ms
>>>>> [DEBUG] Creating service: io.scif.services.DefaultFilePatternService
>>>>> [DEBUG] Created service 'io.scif.services.DefaultFilePatternService'
>> in 2 ms
>>>>> [DEBUG] Creating service: io.scif.formats.tiff.DefaultTiffService
>>>>> [DEBUG] Created service 'io.scif.formats.tiff.DefaultTiffService' in 3
>> ms
>>>>> [DEBUG] Creating service: io.scif.services.DefaultLocationService
>>>>> [DEBUG] Created service 'io.scif.services.DefaultLocationService' in 1
>> ms
>>>>> [DEBUG] Creating service: io.scif.services.JAIIIOServiceImpl
>>>>> [DEBUG] Created service 'io.scif.services.JAIIIOServiceImpl' in 24 ms
>>>>> [DEBUG] Creating service: io.scif.formats.qt.DefaultQTJavaService
>>>>> [DEBUG] Created service 'io.scif.formats.qt.DefaultQTJavaService' in 5
>> ms
>>>>> [DEBUG] Creating service: org.scijava.ui.swing.SwingIconService
>>>>> [DEBUG] Created service 'org.scijava.ui.swing.SwingIconService' in 3 ms
>>>>> [DEBUG] Creating service:
>> org.scijava.plugins.scripting.java.DefaultJavaService
>>>>> [DEBUG] Created service
>> 'org.scijava.plugins.scripting.java.DefaultJavaService' in 2 ms
>>>>> [DEBUG] Creating service: net.imagej.ui.swing.overlay.JHotDrawService
>>>>> [DEBUG] Created service 'net.imagej.ui.swing.overlay.JHotDrawService'
>> in 3 ms
>>>>> [DEBUG] Creating service: net.imagej.updater.DefaultUpdateService
>>>>> [DEBUG] Created service 'net.imagej.updater.DefaultUpdateService' in 7
>> ms
>>>>> [DEBUG] Creating service: net.imagej.updater.DefaultUploaderService
>>>>> [DEBUG] Created service 'net.imagej.updater.DefaultUploaderService' in
>> 1 ms
>>>>> [DEBUG] Creating service: net.imagej.ops.DefaultOpService
>>>>> [DEBUG] Creating service: net.imagej.ops.DefaultOpMatchingService
>>>>> [DEBUG] Created service 'net.imagej.ops.DefaultOpMatchingService' in 2
>> ms
>>>>> [DEBUG] Created service 'net.imagej.ops.DefaultOpService' in 5 ms
>>>>> [DEBUG] Creating service:
>> net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor
>>>>> [DEBUG] Created service
>> 'net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor' in 1
>> ms
>>>>> [DEBUG] Creating service: io.scif.ome.services.DefaultOMEXMLService
>>>>> [DEBUG] Created service 'io.scif.ome.services.DefaultOMEXMLService' in
>> 30 ms
>>>>> [DEBUG] Creating service:
>> io.scif.ome.services.DefaultOMEMetadataService
>>>>> [DEBUG] Created service
>> 'io.scif.ome.services.DefaultOMEMetadataService' in 11 ms
>>>>> [DEBUG] Creating service: net.imagej.display.DummyScreenCaptureService
>>>>> [DEBUG] Created service 'net.imagej.display.DummyScreenCaptureService'
>> in 0 ms
>>>>> [DEBUG] Creating service: net.imagej.render.DummyRenderingService
>>>>> [DEBUG] Created service 'net.imagej.render.DummyRenderingService' in 1
>> ms
>>>>> [DEBUG] Creating service: io.scif.services.DefaultInitializeService
>>>>> [DEBUG] Created service 'io.scif.services.DefaultInitializeService' in
>> 3 ms
>>>>> [DEBUG] Received command line arguments:
>>>>> [DEBUG] publish(
>>>>>    context = org.scijava.Context@7c92eb86
>>>>>    consumed = false,null,null), called from non-EDT Thread:null
>>>>> [DEBUG]     -port7
>>>>> [DEBUG]     -macro
>>>>> [DEBUG]     /home/btupper/hello.ijm
>>>>> [DEBUG]     -batch
>>>>> [INFO] Found 11 ConsoleArgument plugins.
>>>>> [ERROR] Skipping unsupported option -port7
>>>>> [DEBUG] publish(
>>>>>    context = org.scijava.Context@7c92eb86
>>>>>    consumed = false,null,null), called from non-EDT Thread:null
>>>>> [INFO] Discovered user interface: net.imagej.legacy.ui.LegacyUI
>>>>> [INFO] Discovered user interface: org.scijava.ui.swing.sdi.SwingSDIUI
>>>>> [INFO] Discovered user interface: org.scijava.ui.awt.AWTUI
>>>>> [INFO] Discovered user interface: org.scijava.ui.swing.mdi.SwingMdiUI
>>>>> [btupper@fcm-flow ~]$
>>>>
>>>> --
>>>> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>>>
>>
>> --
>> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>>
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html

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