Hello,
I'm learning to use Fiji in a headless CentOS 6 environment. I first updated fiji using... $ fiji --update update I have a simple macro, '~/hello.ijm', adapted from this one... http://rsb.info.nih.gov/ij/macros/SaveTextFileDemo.txt // //START ~/hello.ijm // f = File.open("/home/btupper/hello.txt"); // use d2s() function (double to string) to specify decimal places for (i=0; i<=2*PI; i+=0.01) print(f, d2s(i,6) + " \t" + d2s(sin(i),6) + " \t" + d2s(cos(i),6)); // //FINISH ~/hello.ijm // I then run the macro from the command line. The macro successfully creates and populates the '~/hello.txt' file. However, I get log4j warnings and an error as shown below. (Note, I have pasted in below the entire output when I set the --debug flag.) [btupper@fcm-flow ~]$ fiji --headless -macro /home/btupper/hello.ijm log4j:WARN No appenders could be found for logger (org.bushe.swing.event.EventService). log4j:WARN Please initialize the log4j system properly. log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info. [ERROR] Skipping unsupported option -port7 Here is a bit more info about the Fiji installation. [btupper@fcm-flow ~]$ fiji --print-java-home /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24/ [btupper@fcm-flow ~]$ fiji --print-ij-dir /opt/Fiji.app Do I need to worry about the warnings? I can't locate any instructions for initializing log4j on the Fiji website. I have found these 3rd party instructions [ http://www.javabeat.net/baisc-steps-to-configure-log4j-using-xml-and-properties-file/ ] but I have no idea if the are appropriate for what Fiji requires. I also have no idea how to resolve the error. Any suggestions? Thanks! Ben P.S. Below is the command and output with --debug set [btupper@fcm-flow ~]$ fiji --debug --headless -macro /home/btupper/hello.ijm Available RAM: 3727MB, using 3/4 of that: 2796MB JRE not found in '/opt/Fiji.app/jre' JAVA_HOME contains a JRE: '/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre' Re-executing with correct library lookup path (/opt/Fiji.app/lib/linux64:/opt/Fiji.app/mm/linux64) Available RAM: 3727MB, using 3/4 of that: 2796MB JRE not found in '/opt/Fiji.app/jre' JAVA_HOME contains a JRE: '/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre' Appending missing -batch flag for headless operation. java -Dpython.cachedir.skip=true -Dplugins.dir=/opt/Fiji.app -Xmx2796m -Djava.awt.headless=true -Dapple.awt.UIElement=true -Xincgc -XX:PermSize=128m -Dsun.java.command=ImageJ -Djava.class.path=/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar -Dimagej.dir=/opt/Fiji.app -Dij.dir=/opt/Fiji.app -Dfiji.dir=/opt/Fiji.app -Dfiji.defaultLibPath=lib/amd64/server/libjvm.so -Dfiji.executable=/opt/Fiji.app/fiji-linux64 -Dij.executable=/opt/Fiji.app/fiji-linux64 -Djava.library.path=/opt/Fiji.app/lib/linux64:/opt/Fiji.app/mm/linux64 -Dij.debug=true -Dscijava.log.level=debug net.imagej.launcher.ClassLauncher -classpath /opt/Fiji.app/jars/ij-1.49m.jar fiji.Main -port7 -macro /home/btupper/hello.ijm -batch Using JAVA_HOME /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre Opening Java library /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre/lib/amd64/server/libjvm.so Adding option: -Djava.home=/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24/ Launching main class fiji.Main with parameters [-port7, -macro, /home/btupper/hello.ijm, -batch] Class loader = sun.misc.Launcher$AppClassLoader@b92d342 ij1.plugin.dirs: null $HOME/.plugins: /home/btupper/.plugins does not exist Launching main class net.imagej.Main with parameters [-port7, -macro, /home/btupper/hello.ijm, -batch] Class loader = sun.misc.Launcher$AppClassLoader@b92d342 Checking class loader: sun.misc.Launcher$AppClassLoader@b92d342 Checking URL: file:/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar Not Eclipse because first entry is: file:/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar [DEBUG] Creating service: org.scijava.event.DefaultEventService [DEBUG] Creating service: org.scijava.log.StderrLogService [DEBUG] Created service 'org.scijava.log.StderrLogService' in 2 ms [DEBUG] Creating service: org.scijava.thread.DefaultThreadService [DEBUG] Created service 'org.scijava.thread.DefaultThreadService' in 1 ms [DEBUG] Created service 'org.scijava.event.DefaultEventService' in 47 ms [DEBUG] Creating service: org.scijava.script.DefaultScriptService [DEBUG] Creating service: org.scijava.plugin.DefaultPluginService [INFO] Found 777 plugins. [DEBUG] - class='org.scijava.module.process.DebugPreprocessor', priority=Infinity, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='org.scijava.module.process.DebugPostprocessor', priority=Infinity, enabled=true, pluginType=PostprocessorPlugin [DEBUG] - class='net.imagej.plugins.tools.KonamiHandler', name='Konami', priority=Infinity, enabled=true, pluginType=Tool [DEBUG] - class='org.scijava.event.DefaultEventService', priority=100000.0, enabled=true, pluginType=Service [DEBUG] - class='org.scijava.module.process.ValidityPreprocessor', priority=10001.0, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='org.scijava.ui.UIPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='org.scijava.display.ActiveDisplayPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='org.scijava.module.process.GatewayPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='org.scijava.module.process.ServicePreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='net.imagej.display.ActiveImagePreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='net.imagej.legacy.plugin.ActiveImagePlusPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='io.scif.bf.BioFormatsFormat', name='Bio-Formats Compatibility Format', priority=10000.0, enabled=true, pluginType=Format [DEBUG] - class='net.imagej.ops.slicer.SlicewiseRAI2RAI', name='slicemapper', priority=10000.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.arithmetic.add.parallel.AddConstantToArrayDoubleImageP', name='add', priority=111.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.arithmetic.add.parallel.AddConstantToArrayByteImageP', name='add', priority=110.0, enabled=true, pluginType=Op [DEBUG] - class='io.scif.ome.translators.OMETIFFTranslator$OMEtoOMETIFFTranslator', priority=101.0, enabled=true, pluginType=ToOMETranslator [DEBUG] - class='io.scif.ome.translators.OMETIFFTranslator$OMETIFFtoOMETranslator', priority=101.0, enabled=true, pluginType=FromOMETranslator [DEBUG] - class='io.scif.bf.ome.BioFormatsTranslator$BioFormatsOMETranslator', priority=101.0, enabled=true, pluginType=ToOMETranslator [DEBUG] - class='net.imagej.app.ToplevelImageJApp', name='ImageJ', priority=101.0, enabled=true, pluginType=App [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToArrayDoubleImage', name='add', priority=101.0, enabled=true, pluginType=Op [DEBUG] - class='org.scijava.ui.awt.widget.AWTMessageWidget', priority=100.0, enabled=true, pluginType=InputWidget [DEBUG] - class='org.scijava.module.process.InitPreprocessor', priority=100.0, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='org.scijava.script.DefaultScriptService', priority=100.0, enabled=true, pluginType=Service [DEBUG] - class='net.imagej.lut.DefaultLUTService', priority=100.0, enabled=true, pluginType=Service [DEBUG] - class='net.imagej.legacy.display.LegacyImageDisplayViewer', priority=100.0, enabled=true, pluginType=DisplayViewer [DEBUG] - class='net.imagej.legacy.display.LegacyTextDisplayViewer', priority=100.0, enabled=true, pluginType=DisplayViewer [DEBUG] - class='org.scijava.ui.swing.widget.SwingMessageWidget', priority=100.0, enabled=true, pluginType=InputWidget [DEBUG] - class='net.imagej.ui.swing.overlay.RectangleJHotDrawAdapter', priority=100.0, enabled=true, pluginType=JHotDrawAdapter [DEBUG] - class='net.imagej.ui.swing.overlay.ThresholdJHotDrawAdapter', priority=100.0, enabled=true, pluginType=JHotDrawAdapter [DEBUG] - class='io.scif.ome.translators.BMPTranslator$BMPOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator [DEBUG] - class='io.scif.ome.translators.MicromanagerTranslator$MicromanagerOMETranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator [DEBUG] - class='io.scif.ome.translators.OBFTranslator$OBFOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator [DEBUG] - class='io.scif.ome.translators.TIFFTranslator$TIFFOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator [DEBUG] - class='io.scif.ome.translators.TIFFTranslator$OMETIFFTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator [DEBUG] - class='io.scif.ome.translators.APNGTranslator$OMEAPNGTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator [DEBUG] - class='io.scif.ome.translators.APNGTranslator$APNGOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator [DEBUG] - class='io.scif.ome.translators.ICSTranslator$OMEICSTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator [DEBUG] - class='io.scif.ome.translators.ICSTranslator$ICSOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator [DEBUG] - class='io.scif.ome.translators.DICOMTranslator$DICOMOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator [DEBUG] - class='io.scif.ome.translators.NRRDTranslator$NRRDOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator [DEBUG] - class='io.scif.ome.translators.EPSTranslator$OMEEPSTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator [DEBUG] - class='net.imagej.operator.OpAdd', name='Add', priority=100.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='net.imagej.app.ImageJApp', name='ImageJ', priority=100.0, enabled=true, pluginType=App [DEBUG] - class='net.imagej.ui.swing.tools.SwingRectangleTool', name='Rectangle', description='Rectangular overlays', iconPath='/icons/tools/rectangle.png', priority=100.0, enabled=true, pluginType=Tool [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToArrayByteImage', name='add', priority=100.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$AddOp', name='add', priority=100.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$DivideOp', name='divide', priority=100.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.legacy.ui.LegacyUI', name='legacy', priority=100.0, enabled=true, pluginType=UserInterface [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$MultiplyOp', name='multiply', priority=100.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$SubtractOp', name='subtract', priority=100.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ui.swing.overlay.EllipseJHotDrawAdapter', priority=99.0, enabled=true, pluginType=JHotDrawAdapter [DEBUG] - class='net.imagej.ui.swing.tools.SwingEllipseTool', name='Oval', description='Oval selections', iconPath='/icons/tools/oval.png', priority=99.0, enabled=true, pluginType=Tool [DEBUG] - class='net.imagej.operator.OpSubtract', name='Subtract', priority=99.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='net.imagej.ui.swing.overlay.GeneralPathJHotDrawAdapter', priority=98.5, enabled=true, pluginType=JHotDrawAdapter [DEBUG] - class='net.imagej.ui.swing.overlay.PolygonJHotDrawAdapter', priority=98.0, enabled=true, pluginType=JHotDrawAdapter [DEBUG] - class='net.imagej.operator.OpMultiply', name='Multiply', priority=98.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='net.imagej.ui.swing.tools.SwingPolygonTool', name='Polygon', description='Polygon overlays', iconPath='/icons/tools/polygon.png', priority=98.0, enabled=true, pluginType=Tool [DEBUG] - class='net.imagej.ui.swing.overlay.LineJHotDrawAdapter', priority=97.0, enabled=true, pluginType=JHotDrawAdapter [DEBUG] - class='net.imagej.operator.OpDivide', name='Divide', priority=97.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='net.imagej.ui.swing.tools.SwingLineTool', name='Line', description='Straight line overlays', iconPath='/icons/tools/line.png', priority=97.0, enabled=true, pluginType=Tool [DEBUG] - class='net.imagej.ui.swing.overlay.PolylineJHotDrawAdapter', priority=96.0, enabled=true, pluginType=JHotDrawAdapter [DEBUG] - class='net.imagej.operator.OpAnd', name='AND', priority=96.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='net.imagej.ui.swing.tools.SwingPolylineTool', name='Polyline', description='Polyline overlays', iconPath='/icons/tools/polyline.png', priority=96.0, enabled=true, pluginType=Tool [DEBUG] - class='net.imagej.ui.swing.overlay.AngleJHotDrawAdapter', priority=95.0, enabled=true, pluginType=JHotDrawAdapter [DEBUG] - class='net.imagej.ui.swing.tools.SwingAngleTool', name='Angle', description='Angle overlays', iconPath='/icons/tools/angle.png', priority=95.0, enabled=true, pluginType=Tool [DEBUG] - class='net.imagej.operator.OpOr', name='OR', priority=95.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='net.imagej.ui.swing.overlay.PointJHotDrawOverlay', priority=94.0, enabled=true, pluginType=JHotDrawAdapter [DEBUG] - class='net.imagej.ui.swing.tools.SwingPointTool', name='Point', description='Point overlays', iconPath='/icons/tools/point.png', priority=94.0, enabled=true, pluginType=Tool [DEBUG] - class='net.imagej.operator.OpXor', name='XOR', priority=94.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='net.imagej.operator.OpMin', name='Min', priority=93.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='net.imagej.operator.OpMax', name='Max', priority=92.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='net.imagej.operator.OpAverage', name='Average', priority=91.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='net.imagej.operator.OpDifference', name='Difference', priority=90.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='net.imagej.operator.OpCopy', name='Copy', priority=89.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='net.imagej.operator.OpTransparentZero', name='Transparent-zero', priority=88.0, enabled=true, pluginType=CalculatorOp [DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.FastLAPTrackerFactory', priority=10.0, enabled=true, pluginType=SpotTrackerFactory [DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.SimpleFastLAPTrackerFactory', priority=10.0, enabled=true, pluginType=SpotTrackerFactory [DEBUG] - class='net.imagej.legacy.DefaultLegacyService', priority=1.0, enabled=true, pluginType=Service [DEBUG] - class='org.scijava.ui.swing.widget.SwingChoiceRadioWidget', priority=1.0, enabled=true, pluginType=InputWidget [DEBUG] - class='net.imagej.ops.onthefly.JavassistOptimizer', priority=1.0, enabled=true, pluginType=Optimizer [DEBUG] - class='fiji.plugin.trackmate.visualization.threedviewer.SpotDisplayer3DFactory', priority=1.0, enabled=true, pluginType=ViewFactory [DEBUG] - class='fiji.plugin.trackmate.tracking.kdtree.NearestNeighborTrackerFactory', priority=1.0, enabled=true, pluginType=SpotTrackerFactory [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotContrastAndSNRAnalyzerFactory', priority=1.0, enabled=true, pluginType=SpotAnalyzerFactory [DEBUG] - class='net.imagej.ops.invert.InvertII', name='invert', priority=1.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.generated.AddConstantToDouble', name='add', priority=0.6, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.generated.AddConstantToLong', name='add', priority=0.5, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.generated.AddConstantToFloat', name='add', priority=0.4, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.generated.AddConstantToInteger', name='add', priority=0.3, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.generated.AddConstantToShort', name='add', priority=0.2, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.generated.AddConstantToByte', name='add', priority=0.1, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.plugins.commands.assign.AndDataValuesWith', menu='Process > Math > AND...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.app.AboutImageJ', label='About ImageJ...', menu='Help > About ImageJ...', iconPath='/icons/commands/information.png', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.assign.AbsDataValues', menu='Process > Math > Abs...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionAdaptiveMedian', menu='Process > Noise > Noise Reduction > Adaptive Median', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.restructure.AddAxis', menu='Image > Axes > Add Axis...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.restructure.AddData', menu='Image > Data > Add Data...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.overlay.AddImage', menu='Image > Overlay > Add Image', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.assign.AddNoiseToDataValues', menu='Process > Noise > Add Noise...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.assign.AddSpecifiedNoiseToDataValues', menu='Process > Noise > Add Specified Noise...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.assign.AddToDataValues', menu='Process > Math > Add...', iconPath='/icons/commands/sum.png', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionAlphaTrimmedMean', menu='Process > Noise > Noise Reduction > Alpha Trimmed Mean', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.animation.AnimationOptions', menu='Image > Animation > Animation Options...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.options.OptionsAppearance', menu='Edit > Options > Appearance...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='net.imagej.ops.commands.threshold.GlobalThresholder', menu='Image > Threshold > Apply Threshold', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.options.OptionsArrowTool', menu='Edit > Options > Arrow Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='net.imagej.plugins.commands.display.AutoContrast', menu='Image > Adjust > Auto-Contrast', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.axispos.AxisPositionBackward', menu='Image > Axes > Axis Position Backward', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.axispos.AxisPositionForward', menu='Image > Axes > Axis Position Forward', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.misc.Benchmark', menu='Plugins > Utilities > Benchmark', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.imglib.Binner', menu='Image > Transform > Bin...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.binary.Binarize', menu='Process > Binary > Binarize...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.display.interactive.BrightnessContrast', menu='Image > Adjust > Brightness/Contrast...', iconPath='/icons/commands/contrast.png', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.debug.ButtonDemo', menu='Plugins > Sandbox > Button Demo', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.display.CaptureImage', menu='Plugins > Utilities > Capture Image', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.display.CaptureScreen', menu='Plugins > Utilities > Capture Screen', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.typechange.TypeChanger', menu='Image > Type > Change...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.display.ChannelsTool', menu='Image > Color > Channels Tool...', iconPath='/icons/commands/color_wheel.png', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.options.OptionsChannels', menu='Edit > Options > Channels...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='org.scijava.plugins.commands.io.ClearRecent', label='Clear Recent', menu='File > Open Recent > Clear List', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='org.scijava.plugins.commands.display.Close', menu='File > Close', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.binary.CloseBinaryImage', menu='Process > Binary > Close', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='org.scijava.plugins.commands.display.CloseAll', menu='File > Close All', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.options.OptionsCompatibility', menu='Edit > Options > Compatibility...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='net.imagej.options.OptionsCompiler', menu='Edit > Options > Compiler...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionContraharmonicMean', menu='Process > Noise > Noise Reduction > Contraharmonic Mean', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.options.OptionsConversions', menu='Edit > Options > Conversions...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='net.imagej.ops.commands.convert.ConvertImgPlus', menu='Image > Convert', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.ops.commands.convolve.Convolve', menu='Image > Convolve', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.app.CopyToSystem', menu='Edit > Copy To System', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.binary.CreateMask', menu='Process > Binary > Create Mask...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.app.CreateShortcut', menu='Plugins > Shortcuts > Create Shortcut...', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.imglib.CropImage', menu='Image > Crop', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.options.OptionsDicom', menu='Edit > Options > DICOM...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='net.imagej.options.OptionsOverlay', label='Default Overlay Settings', menu='Image > Overlay > Overlay Options...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='net.imagej.plugins.commands.restructure.DeleteAxis', menu='Image > Axes > Delete Axis...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.restructure.DeleteData', menu='Image > Data > Delete Data...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.display.interactive.DeleteThreshold', menu='Image > Adjust > Delete Threshold', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.display.DeselectOverlays', menu='Edit > Selection > Deselect Overlays', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='org.scijava.ui.swing.commands.DialogPromptDemo', menu='Plugins > Sandbox > Dialog Prompt Demo', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.binary.DilateBinaryImage', menu='Process > Binary > Dilate', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.assign.DivideDataValuesBy', menu='Process > Math > Divide...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='org.scijava.plugins.commands.debug.DumpStack', menu='Plugins > Debug > Dump Stack', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.imglib.DuplicateImage', menu='Image > Duplicate', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.imglib.DuplicateImageContext', menu='Duplicate...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsEast', menu='Process > Shadows > East', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.restructure.EditAxes', menu='Image > Axes > Edit Axes...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.assign.EquationDataValues', menu='Process > Math > Equation...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.binary.ErodeBinaryImage', menu='Process > Binary > Erode', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.assign.ExpDataValues', menu='Process > Math > Exp...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.assign.FillDataValues', menu='Edit > Fill', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='org.scijava.ui.swing.commands.CommandFinder', menu='Plugins > Utilities > Find Commands...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.neigh.FindEdges', menu='Process > Find Edges', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.display.Flatten', menu='Image > Overlay > Flatten', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.restructure.FlipAxis', menu='Image > Transform > Flip Axis', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.rotate.FlipHorizontally', menu='Image > Transform > Flip Horizontally', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.rotate.FlipVertically', menu='Image > Transform > Flip Vertically', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.tools.FloodFillToolConfig', label='Flood Fill Tool', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.options.OptionsFont', menu='Edit > Options > Fonts...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='net.imagej.plugins.commands.overlay.FromOverlayManager', menu='Image > Overlay > From Overlay Manager', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.assign.GammaDataValues', menu='Process > Math > Gamma...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.imglib.GaussianBlur', menu='Process > Filters > Gaussian Blur...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionGeometricMean', menu='Process > Noise > Noise Reduction > Geometric Mean', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionHarmonicMean', menu='Process > Noise > Noise Reduction > Harmonic Mean', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.display.HistogramPlot', menu='Analyze > Histogram Plot', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.calculator.ImageCalculator', menu='Process > Image Calculator...', iconPath='/icons/commands/calculator.png', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.io.OpenDataset', menu='File > Import > Image... 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class='net.imagej.plugins.commands.binary.MakeBinary', menu='Process > Binary > Make Binary...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.overlay.ConvertToMask', menu='Process > Binary > Make Mask Overlay...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.debug.MandelbrotSetImage', menu='Plugins > Sandbox > Mandelbrot Set', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.assign.MaxDataValues', menu='Process > Math > Max...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMax', menu='Process > Noise > Noise Reduction > Maximum', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMean', menu='Process > Noise > Noise Reduction > Mean', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.debug.MeasurementDemo', menu='Plugins > Sandbox > Measurement Demo', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMedian', menu='Process > Noise > Noise Reduction > Median', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.options.OptionsMemoryAndThreads', menu='Edit > Options > Memory & Threads...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMidpoint', menu='Process > Noise > Noise Reduction > Midpoint', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.assign.MinDataValues', menu='Process > Math > Min...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMin', menu='Process > Noise > Noise Reduction > Minimum', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.options.OptionsMisc', menu='Edit > Options > Misc...', priority=0.0, enabled=true, pluginType=OptionsPlugin [DEBUG] - class='net.imagej.legacy.plugin.MixedWorldCommand', menu='Plugins > Sandbox > Mixed World Command', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.debug.MultidimImage', menu='Plugins > Sandbox > Multidimensional Test Image', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.assign.MultiplyDataValuesBy', menu='Process > Math > Multiply...', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.imglib.NanBackground', menu='Process > Math > NaN Background', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.io.NewImage', label='New Image...', menu='File > New > Image...', iconPath='/icons/commands/picture.png', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNorth', menu='Process > Shadows > North', priority=0.0, enabled=true, pluginType=Command [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNortheast', menu='Process > Shadows > Northeast', priority=0.0, enabled=true, pluginType=Command [DEBUG] - 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class='net.imagej.ops.threshold.LocalThreshold', name='threshold', priority=0.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealUlp', name='ulp', priority=0.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealUniformRandom', name='uniformrandom', priority=0.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealXorConstant', name='xorconstant', priority=0.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealZero', name='zero', priority=0.0, enabled=true, pluginType=Op [DEBUG] - class='fiji.plugin.trackmate.tracking.ManualTrackerFactory', priority=-1.0, enabled=true, pluginType=SpotTrackerFactory [DEBUG] - class='net.imagej.ops.map.ParallelMap', name='map', priority=-95.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.map.ParallelMapI2I', name='map', priority=-97.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.map.ParallelMapI2R', name='map', priority=-98.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.crop.CropImgPlus', name='crop', aliases='slice', priority=-99.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.crop.CropLabeling', name='crop', aliases='slice', priority=-99.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.map.MapII2II', name='map', priority=-99.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.project.parallel.DefaultProjectP', name='project', priority=-99.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.statistics.StdDevRealTypeDirect', name='stddev', priority=-99.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.statistics.VarianceRealTypeDirect', name='variance', priority=-99.0, enabled=true, pluginType=Op [DEBUG] - class='org.scijava.ui.dnd.FileDragAndDropHandler', priority=-100.0, enabled=true, pluginType=DragAndDropHandler [DEBUG] - class='org.scijava.display.DefaultTextDisplay', priority=-100.0, enabled=true, pluginType=Display [DEBUG] - class='org.scijava.log.StderrLogService', priority=-100.0, enabled=true, pluginType=Service [DEBUG] - class='org.scijava.platform.DefaultAppEventService', priority=-100.0, enabled=true, pluginType=Service [DEBUG] - class='net.imagej.display.DummyScreenCaptureService', priority=-100.0, enabled=true, pluginType=Service [DEBUG] - class='net.imagej.render.DummyRenderingService', priority=-100.0, enabled=true, pluginType=Service [DEBUG] - class='net.imagej.io.DatasetIOPlugin', priority=-100.0, enabled=true, pluginType=IOPlugin [DEBUG] - class='io.scif.formats.APNGFormat$APNGTranslator', priority=-100.0, enabled=true, pluginType=Translator [DEBUG] - class='io.scif.formats.qt.NativeQTFormat$NativeQTTranslator', priority=-100.0, enabled=true, pluginType=Translator [DEBUG] - class='io.scif.formats.FakeFormat$FakeTranslator', priority=-100.0, enabled=true, pluginType=Translator [DEBUG] - class='io.scif.formats.MicromanagerFormat$MicromanagerTranslator', priority=-100.0, enabled=true, pluginType=Translator [DEBUG] - class='io.scif.services.DefaultInitializeService', priority=-100.0, enabled=true, pluginType=Service [DEBUG] - class='io.scif.formats.AVIFormat$Translator', priority=-100.0, enabled=true, pluginType=Translator [DEBUG] - class='io.scif.formats.ICSFormat$ICSTranslator', priority=-100.0, enabled=true, pluginType=Translator [DEBUG] - class='io.scif.formats.EPSFormat$EPSTranslator', priority=-100.0, enabled=true, pluginType=Translator [DEBUG] - class='io.scif.formats.ImageIOFormat$ImageIOTranslator', priority=-100.0, enabled=true, pluginType=Translator [DEBUG] - class='io.scif.formats.qt.LegacyQTFormat$LegacyQTTranslator', priority=-100.0, enabled=true, pluginType=Translator [DEBUG] - class='net.imagej.legacy.plugin.DefaultLegacyOpener', priority=-100.0, enabled=true, pluginType=LegacyOpener [DEBUG] - class='net.imagej.legacy.plugin.DefaultLegacyEditor', priority=-100.0, enabled=true, pluginType=LegacyEditor [DEBUG] - class='org.scijava.plugins.scripting.java.MainJavaRunner', priority=-100.0, enabled=true, pluginType=JavaRunner [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat$OMEXMLTranslator', priority=-100.0, enabled=true, pluginType=Translator [DEBUG] - class='io.scif.formats.qt.LegacyQTFormat', name='QuickTime', priority=-100.0, enabled=true, pluginType=Format [DEBUG] - class='org.scijava.app.SciJavaApp', name='SciJava', priority=-100.0, enabled=true, pluginType=App [DEBUG] - class='io.scif.formats.JPEGTileFormat', name='Tile JPEG', priority=-100.0, enabled=true, pluginType=Format [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToNumericType', name='add', priority=-100.0, enabled=true, pluginType=Op [DEBUG] - class='org.scijava.ui.awt.AWTUI', name='awt', priority=-100.0, enabled=true, pluginType=UserInterface [DEBUG] - class='net.imagej.ops.crop.CropRAI', name='crop', aliases='slice', priority=-100.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.map.MapII2RAI', name='map', priority=-100.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.map.MapRAI2III', name='map', priority=-100.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.map.MapI', name='map', priority=-100.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.neighborhood.MapNeighborhood', name='map', priority=-100.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.statistics.MaxRealType', name='max', priority=-100.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.statistics.MeanRealType', name='mean', priority=-100.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.statistics.MedianRealType', name='median', priority=-100.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.statistics.MinRealType', name='min', priority=-100.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.project.ProjectRAI2II', name='project', priority=-100.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.misc.SizeIterableInterval', name='size', priority=-100.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.statistics.StdDevRealType', name='stddev', priority=-100.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.statistics.SumRealType', name='sum', priority=-100.0, enabled=true, pluginType=Op [DEBUG] - class='org.scijava.ui.swing.mdi.SwingMdiUI', name='swing-mdi', priority=-100.0, enabled=true, pluginType=UserInterface [DEBUG] - class='net.imagej.ops.statistics.VarianceRealType', name='variance', priority=-100.0, enabled=true, pluginType=Op [DEBUG] - class='org.scijava.text.io.TextIOPlugin', priority=-101.0, enabled=true, pluginType=IOPlugin [DEBUG] - class='net.imagej.ops.map.MapI2I', name='map', priority=-101.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.plugins.tools.WandTool', name='Wand', description='Wand (tracing) tool', iconPath='/icons/tools/wand.png', priority=-110.0, enabled=false, pluginType=Tool [DEBUG] - class='net.imagej.ui.swing.tools.SwingTextTool', name='Text', description='Text tool', iconPath='/icons/tools/text.png', priority=-115.0, enabled=false, pluginType=Tool [DEBUG] - class='net.imagej.plugins.tools.ZoomTool', name='Zoom', description='Magnifying glass (or use "+" and "-" keys)', iconPath='/icons/tools/zoom.png', priority=-200.0, enabled=true, pluginType=Tool [DEBUG] - class='net.imagej.plugins.tools.PanTool', name='Pan', description='Scrolling tool (or press space bar and drag)', iconPath='/icons/tools/pan.png', priority=-201.0, enabled=true, pluginType=Tool [DEBUG] - class='net.imagej.plugins.tools.PaintBrushTool', name='Paintbrush', description='Paintbrush Tool', iconPath='/icons/tools/paintbrush.png', priority=-300.0, enabled=true, pluginType=Tool [DEBUG] - class='net.imagej.plugins.tools.PencilTool', name='Pencil', description='Pencil Tool', iconPath='/icons/tools/pencil.png', priority=-301.0, enabled=true, pluginType=Tool [DEBUG] - class='net.imagej.plugins.tools.SprayCanTool', name='SprayCan', label='Spray Can', description='Spray Can Tool', iconPath='/icons/tools/spray-can.png', priority=-303.0, enabled=true, pluginType=Tool [DEBUG] - class='net.imagej.plugins.tools.FloodFillTool', name='FloodFill', label='Flood Fill', description='Flood Fill Tool', iconPath='/icons/tools/flood-fill.png', priority=-304.0, enabled=true, pluginType=Tool [DEBUG] - class='net.imagej.plugins.tools.ArrowTool', name='Arrow', description='Arrow Tool', iconPath='/icons/tools/arrow.png', priority=-305.0, enabled=false, pluginType=Tool [DEBUG] - class='net.imagej.plugins.tools.FgColorTool', name='Foreground', iconPath='/icons/tools/blank.png', priority=-500.0, enabled=true, pluginType=Tool [DEBUG] - class='net.imagej.plugins.tools.BgColorTool', name='Background', iconPath='/icons/tools/blankBlack.png', priority=-501.0, enabled=true, pluginType=Tool [DEBUG] - class='io.scif.ome.formats.OMETIFFFormat', priority=-9998.0, enabled=true, pluginType=Format [DEBUG] - class='io.scif.ome.formats.OMETIFFFormat$OMETIFFTranslator', priority=-9998.0, enabled=true, pluginType=Translator [DEBUG] - class='org.scijava.module.process.LoadInputsPreprocessor', priority=-9999.0, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='io.scif.formats.TIFFFormat$TIFFTranslator', priority=-9999.0, enabled=true, pluginType=Translator [DEBUG] - class='io.scif.formats.TIFFFormat', name='Tagged Image File Format', priority=-9999.0, enabled=true, pluginType=Format [DEBUG] - class='org.scijava.ui.FilePreprocessor', priority=-9999.5, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='org.scijava.ui.awt.widget.AWTInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='org.scijava.plugins.text.plain.PlainTextFormat', priority=-10000.0, enabled=true, pluginType=TextFormat [DEBUG] - class='org.scijava.display.DisplayPostprocessor', priority=-10000.0, enabled=true, pluginType=PostprocessorPlugin [DEBUG] - class='io.scif.DefaultTranslator', priority=-10000.0, enabled=true, pluginType=Translator [DEBUG] - class='net.imagej.legacy.ui.LegacyInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='org.scijava.ui.swing.widget.SwingInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='org.scijava.ui.swing.widget.SwingMdiInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='net.imagej.ui.swing.overlay.DefaultJHotDrawAdapter', priority=-10000.0, enabled=true, pluginType=JHotDrawAdapter [DEBUG] - class='org.scijava.platform.DefaultPlatform', name='Default', priority=-10000.0, enabled=true, pluginType=Platform [DEBUG] - class='net.imagej.plugins.tools.AcceleratorHandler', name='Keyboard Shortcuts', priority=-10000.0, enabled=true, pluginType=Tool [DEBUG] - class='io.scif.formats.MinimalTIFFFormat', name='Minimal TIFF', priority=-10000.0, enabled=true, pluginType=Format [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToImageFunctional', name='add', priority=-10000.0, enabled=true, pluginType=Op [DEBUG] - class='net.imagej.ops.chunker.InterleavedChunker', name='chunker', priority=-10000.0, enabled=true, pluginType=Op [DEBUG] - class='org.scijava.module.process.CheckInputsPreprocessor', priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='org.scijava.module.process.SaveInputsPreprocessor', priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin [DEBUG] - class='io.scif.formats.TIFFJAIFormat', name='Tagged Image File Format', priority=-10001.0, enabled=true, pluginType=Format [DEBUG] - class='net.imagej.ops.misc.SizeIterable', name='size', priority=-Infinity, enabled=true, pluginType=Op [DEBUG] Created service 'org.scijava.plugin.DefaultPluginService' in 51 ms [DEBUG] Creating service: org.scijava.object.DefaultObjectService log4j:WARN No appenders could be found for logger (org.bushe.swing.event.EventService). log4j:WARN Please initialize the log4j system properly. log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info. [DEBUG] Created service 'org.scijava.object.DefaultObjectService' in 72 ms [DEBUG] Creating service: org.scijava.module.DefaultModuleService [DEBUG] Creating service: org.scijava.prefs.DefaultPrefService [DEBUG] Created service 'org.scijava.prefs.DefaultPrefService' in 4 ms [DEBUG] Creating service: org.scijava.convert.DefaultConvertService [DEBUG] Created service 'org.scijava.convert.DefaultConvertService' in 4 ms [DEBUG] Created service 'org.scijava.module.DefaultModuleService' in 14 ms [DEBUG] Creating service: org.scijava.command.DefaultCommandService [DEBUG] Created service 'org.scijava.command.DefaultCommandService' in 36 ms [DEBUG] Created service 'org.scijava.script.DefaultScriptService' in 184 ms [DEBUG] Creating service: net.imagej.lut.DefaultLUTService [DEBUG] Creating service: net.imagej.DefaultDatasetService [DEBUG] Creating service: io.scif.services.DefaultFormatService [DEBUG] Created service 'io.scif.services.DefaultFormatService' in 3 ms [DEBUG] Creating service: net.imagej.types.DefaultDataTypeService [INFO] Found 11 DataType plugins. [DEBUG] Created service 'net.imagej.types.DefaultDataTypeService' in 40 ms [DEBUG] Created service 'net.imagej.DefaultDatasetService' in 61 ms [DEBUG] Creating service: org.scijava.display.DefaultDisplayService [DEBUG] Created service 'org.scijava.display.DefaultDisplayService' in 5 ms [DEBUG] Creating service: net.imagej.display.DefaultImageDisplayService [DEBUG] Created service 'net.imagej.display.DefaultImageDisplayService' in 3 ms [DEBUG] Created service 'net.imagej.lut.DefaultLUTService' in 74 ms [DEBUG] Creating service: net.imagej.legacy.DefaultLegacyService [DEBUG] Creating service: net.imagej.display.DefaultOverlayService [DEBUG] Creating service: org.scijava.options.DefaultOptionsService [DEBUG] Created service 'org.scijava.options.DefaultOptionsService' in 2 ms [DEBUG] Creating service: net.imagej.ui.awt.AWTRenderingService [DEBUG] Created service 'net.imagej.ui.awt.AWTRenderingService' in 1 ms [DEBUG] Created service 'net.imagej.display.DefaultOverlayService' in 10 ms [DEBUG] Creating service: net.imagej.threshold.DefaultThresholdService [DEBUG] Created service 'net.imagej.threshold.DefaultThresholdService' in 4 ms [DEBUG] Creating service: org.scijava.menu.DefaultMenuService [DEBUG] Created service 'org.scijava.menu.DefaultMenuService' in 3 ms [DEBUG] Creating service: org.scijava.app.DefaultStatusService [DEBUG] Creating service: org.scijava.app.DefaultAppService [DEBUG] Created service 'org.scijava.app.DefaultAppService' in 4 ms [DEBUG] Created service 'org.scijava.app.DefaultStatusService' in 5 ms [INFO] Found 8 ScriptLanguage plugins. [INFO] Found 0 scripts [INFO] Overriding Upload Sample Image; identifier: command:net.imagej.plugins.commands.upload.SampleImageUploader; jar: file:/opt/Fiji.app/jars/imagej-plugins-commands-0.2.6.jar [INFO] Overriding Test FlowCam; identifier: script:/opt/Fiji.app/plugins/FlowCam/Test_FlowCam.ijm; jar: file:/opt/Fiji.app/jars/scijava-common-2.33.0.jar [DEBUG] Created service 'net.imagej.legacy.DefaultLegacyService' in 685 ms [DEBUG] Creating service: fiji.DefaultFijiService [DEBUG] Created service 'fiji.DefaultFijiService' in 1 ms [DEBUG] Creating service: net.imglib2.meta.units.DefaultUnitService [DEBUG] Created service 'net.imglib2.meta.units.DefaultUnitService' in 44 ms [DEBUG] Creating service: net.imagej.ui.awt.AWTScreenCaptureService [DEBUG] Created service 'net.imagej.ui.awt.AWTScreenCaptureService' in 2 ms [DEBUG] Creating service: org.scijava.input.DefaultInputService [DEBUG] Created service 'org.scijava.input.DefaultInputService' in 6 ms [DEBUG] Creating service: org.scijava.ui.DefaultUIService [DEBUG] Creating service: org.scijava.platform.DefaultPlatformService [DEBUG] Creating service: org.scijava.platform.DefaultAppEventService [DEBUG] Created service 'org.scijava.platform.DefaultAppEventService' in 2 ms [INFO] Found 1 Platform plugins. [DEBUG] Configuring platform: org.scijava.platform.DefaultPlatform [DEBUG] Created service 'org.scijava.platform.DefaultPlatformService' in 11 ms [DEBUG] Creating service: org.scijava.tool.DefaultToolService [DEBUG] Created service 'org.scijava.tool.DefaultToolService' in 5 ms [DEBUG] Created service 'org.scijava.ui.DefaultUIService' in 23 ms [DEBUG] Creating service: org.scijava.ui.dnd.DefaultDragAndDropService [DEBUG] Created service 'org.scijava.ui.dnd.DefaultDragAndDropService' in 5 ms [DEBUG] Creating service: org.scijava.text.DefaultTextService [DEBUG] Created service 'org.scijava.text.DefaultTextService' in 3 ms [DEBUG] Creating service: org.scijava.io.DefaultRecentFileService [DEBUG] Created service 'org.scijava.io.DefaultRecentFileService' in 61 ms [DEBUG] Creating service: org.scijava.io.DefaultIOService [DEBUG] Created service 'org.scijava.io.DefaultIOService' in 4 ms [DEBUG] Creating service: org.scijava.widget.DefaultWidgetService [INFO] Found 22 InputWidget plugins. [DEBUG] Created service 'org.scijava.widget.DefaultWidgetService' in 6 ms [DEBUG] Creating service: org.scijava.welcome.DefaultWelcomeService [DEBUG] Created service 'org.scijava.welcome.DefaultWelcomeService' in 2 ms [DEBUG] Creating service: org.scijava.script.DefaultScriptHeaderService [DEBUG] Created service 'org.scijava.script.DefaultScriptHeaderService' in 2 ms [DEBUG] Creating service: org.scijava.event.DefaultEventHistory [DEBUG] Created service 'org.scijava.event.DefaultEventHistory' in 2 ms [DEBUG] Creating service: org.scijava.console.DefaultConsoleService [DEBUG] Created service 'org.scijava.console.DefaultConsoleService' in 2 ms [DEBUG] Creating service: net.imagej.operator.DefaultCalculatorService [DEBUG] Created service 'net.imagej.operator.DefaultCalculatorService' in 2 ms [DEBUG] Creating service: net.imagej.autoscale.DefaultAutoscaleService [DEBUG] Created service 'net.imagej.autoscale.DefaultAutoscaleService' in 3 ms [DEBUG] Creating service: net.imagej.sampler.DefaultSamplerService [DEBUG] Created service 'net.imagej.sampler.DefaultSamplerService' in 3 ms [DEBUG] Creating service: net.imagej.display.DefaultZoomService [DEBUG] Created service 'net.imagej.display.DefaultZoomService' in 2 ms [DEBUG] Creating service: net.imagej.display.DefaultWindowService [DEBUG] Created service 'net.imagej.display.DefaultWindowService' in 2 ms [DEBUG] Creating service: net.imagej.DefaultImgPlusService [DEBUG] Created service 'net.imagej.DefaultImgPlusService' in 1 ms [DEBUG] Creating service: net.imagej.ui.DefaultImageJUIService [DEBUG] Created service 'net.imagej.ui.DefaultImageJUIService' in 1 ms [DEBUG] Creating service: net.imagej.measure.DefaultStatisticsService [DEBUG] Created service 'net.imagej.measure.DefaultStatisticsService' in 3 ms [DEBUG] Creating service: net.imagej.measure.DefaultMeasurementService [DEBUG] Created service 'net.imagej.measure.DefaultMeasurementService' in 1 ms [DEBUG] Creating service: net.imagej.animation.DefaultAnimationService [DEBUG] Created service 'net.imagej.animation.DefaultAnimationService' in 4 ms [DEBUG] Creating service: io.scif.io.DefaultNIOService [DEBUG] Created service 'io.scif.io.DefaultNIOService' in 2 ms [DEBUG] Creating service: io.scif.img.converters.DefaultPlaneConverterService [DEBUG] Created service 'io.scif.img.converters.DefaultPlaneConverterService' in 6 ms [DEBUG] Creating service: io.scif.img.DefaultImgUtilityService [DEBUG] Created service 'io.scif.img.DefaultImgUtilityService' in 5 ms [DEBUG] Creating service: io.scif.gui.DefaultGUIService [DEBUG] Created service 'io.scif.gui.DefaultGUIService' in 3 ms [DEBUG] Creating service: io.scif.xml.DefaultXMLService [DEBUG] Created service 'io.scif.xml.DefaultXMLService' in 22 ms [DEBUG] Creating service: io.scif.refs.DefaultRefManagerService [DEBUG] Created service 'io.scif.refs.DefaultRefManagerService' in 1 ms [DEBUG] Creating service: io.scif.services.DefaultTranslatorService [DEBUG] Created service 'io.scif.services.DefaultTranslatorService' in 2 ms [DEBUG] Creating service: io.scif.codec.DefaultCodecService [DEBUG] Created service 'io.scif.codec.DefaultCodecService' in 1 ms [DEBUG] Creating service: io.scif.img.cell.cache.MapDBCache [DEBUG] Created service 'io.scif.img.cell.cache.MapDBCache' in 8 ms [DEBUG] Creating service: io.scif.DefaultMetadataService [DEBUG] Created service 'io.scif.DefaultMetadataService' in 0 ms [DEBUG] Creating service: io.scif.services.DefaultFilePatternService [DEBUG] Created service 'io.scif.services.DefaultFilePatternService' in 2 ms [DEBUG] Creating service: io.scif.formats.tiff.DefaultTiffService [DEBUG] Created service 'io.scif.formats.tiff.DefaultTiffService' in 3 ms [DEBUG] Creating service: io.scif.services.DefaultLocationService [DEBUG] Created service 'io.scif.services.DefaultLocationService' in 1 ms [DEBUG] Creating service: io.scif.services.JAIIIOServiceImpl [DEBUG] Created service 'io.scif.services.JAIIIOServiceImpl' in 24 ms [DEBUG] Creating service: io.scif.formats.qt.DefaultQTJavaService [DEBUG] Created service 'io.scif.formats.qt.DefaultQTJavaService' in 5 ms [DEBUG] Creating service: org.scijava.ui.swing.SwingIconService [DEBUG] Created service 'org.scijava.ui.swing.SwingIconService' in 3 ms [DEBUG] Creating service: org.scijava.plugins.scripting.java.DefaultJavaService [DEBUG] Created service 'org.scijava.plugins.scripting.java.DefaultJavaService' in 2 ms [DEBUG] Creating service: net.imagej.ui.swing.overlay.JHotDrawService [DEBUG] Created service 'net.imagej.ui.swing.overlay.JHotDrawService' in 3 ms [DEBUG] Creating service: net.imagej.updater.DefaultUpdateService [DEBUG] Created service 'net.imagej.updater.DefaultUpdateService' in 7 ms [DEBUG] Creating service: net.imagej.updater.DefaultUploaderService [DEBUG] Created service 'net.imagej.updater.DefaultUploaderService' in 1 ms [DEBUG] Creating service: net.imagej.ops.DefaultOpService [DEBUG] Creating service: net.imagej.ops.DefaultOpMatchingService [DEBUG] Created service 'net.imagej.ops.DefaultOpMatchingService' in 2 ms [DEBUG] Created service 'net.imagej.ops.DefaultOpService' in 5 ms [DEBUG] Creating service: net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor [DEBUG] Created service 'net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor' in 1 ms [DEBUG] Creating service: io.scif.ome.services.DefaultOMEXMLService [DEBUG] Created service 'io.scif.ome.services.DefaultOMEXMLService' in 30 ms [DEBUG] Creating service: io.scif.ome.services.DefaultOMEMetadataService [DEBUG] Created service 'io.scif.ome.services.DefaultOMEMetadataService' in 11 ms [DEBUG] Creating service: net.imagej.display.DummyScreenCaptureService [DEBUG] Created service 'net.imagej.display.DummyScreenCaptureService' in 0 ms [DEBUG] Creating service: net.imagej.render.DummyRenderingService [DEBUG] Created service 'net.imagej.render.DummyRenderingService' in 1 ms [DEBUG] Creating service: io.scif.services.DefaultInitializeService [DEBUG] Created service 'io.scif.services.DefaultInitializeService' in 3 ms [DEBUG] Received command line arguments: [DEBUG] publish( context = org.scijava.Context@7c92eb86 consumed = false,null,null), called from non-EDT Thread:null [DEBUG] -port7 [DEBUG] -macro [DEBUG] /home/btupper/hello.ijm [DEBUG] -batch [INFO] Found 11 ConsoleArgument plugins. [ERROR] Skipping unsupported option -port7 [DEBUG] publish( context = org.scijava.Context@7c92eb86 consumed = false,null,null), called from non-EDT Thread:null [INFO] Discovered user interface: net.imagej.legacy.ui.LegacyUI [INFO] Discovered user interface: org.scijava.ui.swing.sdi.SwingSDIUI [INFO] Discovered user interface: org.scijava.ui.awt.AWTUI [INFO] Discovered user interface: org.scijava.ui.swing.mdi.SwingMdiUI [btupper@fcm-flow ~]$ -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html |
On Dec 16, 2014, at 3:11 PM, Ben Tupper <[hidden email]> wrote:
> > Hello, > > I'm learning to use Fiji in a headless CentOS 6 environment. I first updated fiji using... > > $ fiji --update update > > > I have a simple macro, '~/hello.ijm', adapted from this one... http://rsb.info.nih.gov/ij/macros/SaveTextFileDemo.txt > > // > //START ~/hello.ijm > // > f = File.open("/home/btupper/hello.txt"); > // use d2s() function (double to string) to specify decimal places > for (i=0; i<=2*PI; i+=0.01) > print(f, d2s(i,6) + " \t" + d2s(sin(i),6) + " \t" + d2s(cos(i),6)); > // > //FINISH ~/hello.ijm > // > > I then run the macro from the command line. The macro successfully creates and populates the '~/hello.txt' file. However, I get log4j warnings and an error as shown below. (Note, I have pasted in below the entire output when I set the --debug flag.) You should report this bug using Fiji’s Help>Report a Bug command. The bug report will automatically provide more information about your setup and it will help the Fiji developers keep track of your bug report so that it is not forgotten. http://imagej.net/Bugs -wayne > [btupper@fcm-flow ~]$ fiji --headless -macro /home/btupper/hello.ijm > log4j:WARN No appenders could be found for logger (org.bushe.swing.event.EventService). > log4j:WARN Please initialize the log4j system properly. > log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info. > [ERROR] Skipping unsupported option -port7 > > Here is a bit more info about the Fiji installation. > > [btupper@fcm-flow ~]$ fiji --print-java-home > /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24/ > [btupper@fcm-flow ~]$ fiji --print-ij-dir > /opt/Fiji.app > > > Do I need to worry about the warnings? I can't locate any instructions for initializing log4j on the Fiji website. I have found these 3rd party instructions [ http://www.javabeat.net/baisc-steps-to-configure-log4j-using-xml-and-properties-file/ ] but I have no idea if the are appropriate for what Fiji requires. > > I also have no idea how to resolve the error. > > Any suggestions? > > Thanks! > Ben > > > P.S. Below is the command and output with --debug set > > [btupper@fcm-flow ~]$ fiji --debug --headless -macro /home/btupper/hello.ijm > Available RAM: 3727MB, using 3/4 of that: 2796MB > JRE not found in '/opt/Fiji.app/jre' > JAVA_HOME contains a JRE: '/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre' > Re-executing with correct library lookup path (/opt/Fiji.app/lib/linux64:/opt/Fiji.app/mm/linux64) > Available RAM: 3727MB, using 3/4 of that: 2796MB > JRE not found in '/opt/Fiji.app/jre' > JAVA_HOME contains a JRE: '/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre' > Appending missing -batch flag for headless operation. > java -Dpython.cachedir.skip=true -Dplugins.dir=/opt/Fiji.app -Xmx2796m -Djava.awt.headless=true -Dapple.awt.UIElement=true -Xincgc -XX:PermSize=128m -Dsun.java.command=ImageJ -Djava.class.path=/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar -Dimagej.dir=/opt/Fiji.app -Dij.dir=/opt/Fiji.app -Dfiji.dir=/opt/Fiji.app -Dfiji.defaultLibPath=lib/amd64/server/libjvm.so -Dfiji.executable=/opt/Fiji.app/fiji-linux64 -Dij.executable=/opt/Fiji.app/fiji-linux64 -Djava.library.path=/opt/Fiji.app/lib/linux64:/opt/Fiji.app/mm/linux64 -Dij.debug=true -Dscijava.log.level=debug net.imagej.launcher.ClassLauncher -classpath /opt/Fiji.app/jars/ij-1.49m.jar fiji.Main -port7 -macro /home/btupper/hello.ijm -batch > Using JAVA_HOME /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre > Opening Java library /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre/lib/amd64/server/libjvm.so > Adding option: -Djava.home=/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24/ > Launching main class fiji.Main with parameters [-port7, -macro, /home/btupper/hello.ijm, -batch] > Class loader = sun.misc.Launcher$AppClassLoader@b92d342 > ij1.plugin.dirs: null > $HOME/.plugins: /home/btupper/.plugins does not exist > Launching main class net.imagej.Main with parameters [-port7, -macro, /home/btupper/hello.ijm, -batch] > Class loader = sun.misc.Launcher$AppClassLoader@b92d342 > Checking class loader: sun.misc.Launcher$AppClassLoader@b92d342 > Checking URL: file:/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar > Not Eclipse because first entry is: file:/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar > [DEBUG] Creating service: org.scijava.event.DefaultEventService > [DEBUG] Creating service: org.scijava.log.StderrLogService > [DEBUG] Created service 'org.scijava.log.StderrLogService' in 2 ms > [DEBUG] Creating service: org.scijava.thread.DefaultThreadService > [DEBUG] Created service 'org.scijava.thread.DefaultThreadService' in 1 ms > [DEBUG] Created service 'org.scijava.event.DefaultEventService' in 47 ms > [DEBUG] Creating service: org.scijava.script.DefaultScriptService > [DEBUG] Creating service: org.scijava.plugin.DefaultPluginService > [INFO] Found 777 plugins. > [DEBUG] - class='org.scijava.module.process.DebugPreprocessor', priority=Infinity, enabled=true, pluginType=PreprocessorPlugin > [DEBUG] - class='org.scijava.module.process.DebugPostprocessor', priority=Infinity, enabled=true, pluginType=PostprocessorPlugin > [DEBUG] - class='net.imagej.plugins.tools.KonamiHandler', name='Konami', priority=Infinity, enabled=true, pluginType=Tool > [DEBUG] - class='org.scijava.event.DefaultEventService', priority=100000.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.module.process.ValidityPreprocessor', priority=10001.0, enabled=true, pluginType=PreprocessorPlugin > [DEBUG] - class='org.scijava.ui.UIPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin > [DEBUG] - class='org.scijava.display.ActiveDisplayPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin > [DEBUG] - class='org.scijava.module.process.GatewayPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin > [DEBUG] - class='org.scijava.module.process.ServicePreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin > [DEBUG] - class='net.imagej.display.ActiveImagePreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin > [DEBUG] - class='net.imagej.legacy.plugin.ActiveImagePlusPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin > [DEBUG] - class='io.scif.bf.BioFormatsFormat', name='Bio-Formats Compatibility Format', priority=10000.0, enabled=true, pluginType=Format > [DEBUG] - class='net.imagej.ops.slicer.SlicewiseRAI2RAI', name='slicemapper', priority=10000.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.arithmetic.add.parallel.AddConstantToArrayDoubleImageP', name='add', priority=111.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.arithmetic.add.parallel.AddConstantToArrayByteImageP', name='add', priority=110.0, enabled=true, pluginType=Op > [DEBUG] - class='io.scif.ome.translators.OMETIFFTranslator$OMEtoOMETIFFTranslator', priority=101.0, enabled=true, pluginType=ToOMETranslator > [DEBUG] - class='io.scif.ome.translators.OMETIFFTranslator$OMETIFFtoOMETranslator', priority=101.0, enabled=true, pluginType=FromOMETranslator > [DEBUG] - class='io.scif.bf.ome.BioFormatsTranslator$BioFormatsOMETranslator', priority=101.0, enabled=true, pluginType=ToOMETranslator > [DEBUG] - class='net.imagej.app.ToplevelImageJApp', name='ImageJ', priority=101.0, enabled=true, pluginType=App > [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToArrayDoubleImage', name='add', priority=101.0, enabled=true, pluginType=Op > [DEBUG] - class='org.scijava.ui.awt.widget.AWTMessageWidget', priority=100.0, enabled=true, pluginType=InputWidget > [DEBUG] - class='org.scijava.module.process.InitPreprocessor', priority=100.0, enabled=true, pluginType=PreprocessorPlugin > [DEBUG] - class='org.scijava.script.DefaultScriptService', priority=100.0, enabled=true, pluginType=Service > [DEBUG] - class='net.imagej.lut.DefaultLUTService', priority=100.0, enabled=true, pluginType=Service > [DEBUG] - class='net.imagej.legacy.display.LegacyImageDisplayViewer', priority=100.0, enabled=true, pluginType=DisplayViewer > [DEBUG] - class='net.imagej.legacy.display.LegacyTextDisplayViewer', priority=100.0, enabled=true, pluginType=DisplayViewer > [DEBUG] - class='org.scijava.ui.swing.widget.SwingMessageWidget', priority=100.0, enabled=true, pluginType=InputWidget > [DEBUG] - class='net.imagej.ui.swing.overlay.RectangleJHotDrawAdapter', priority=100.0, enabled=true, pluginType=JHotDrawAdapter > [DEBUG] - class='net.imagej.ui.swing.overlay.ThresholdJHotDrawAdapter', priority=100.0, enabled=true, pluginType=JHotDrawAdapter > [DEBUG] - class='io.scif.ome.translators.BMPTranslator$BMPOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator > [DEBUG] - class='io.scif.ome.translators.MicromanagerTranslator$MicromanagerOMETranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator > [DEBUG] - class='io.scif.ome.translators.OBFTranslator$OBFOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator > [DEBUG] - class='io.scif.ome.translators.TIFFTranslator$TIFFOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator > [DEBUG] - class='io.scif.ome.translators.TIFFTranslator$OMETIFFTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator > [DEBUG] - class='io.scif.ome.translators.APNGTranslator$OMEAPNGTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator > [DEBUG] - class='io.scif.ome.translators.APNGTranslator$APNGOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator > [DEBUG] - class='io.scif.ome.translators.ICSTranslator$OMEICSTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator > [DEBUG] - class='io.scif.ome.translators.ICSTranslator$ICSOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator > [DEBUG] - class='io.scif.ome.translators.DICOMTranslator$DICOMOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator > [DEBUG] - class='io.scif.ome.translators.NRRDTranslator$NRRDOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator > [DEBUG] - class='io.scif.ome.translators.EPSTranslator$OMEEPSTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator > [DEBUG] - class='net.imagej.operator.OpAdd', name='Add', priority=100.0, enabled=true, pluginType=CalculatorOp > [DEBUG] - class='net.imagej.app.ImageJApp', name='ImageJ', priority=100.0, enabled=true, pluginType=App > [DEBUG] - class='net.imagej.ui.swing.tools.SwingRectangleTool', name='Rectangle', description='Rectangular overlays', iconPath='/icons/tools/rectangle.png', priority=100.0, enabled=true, pluginType=Tool > [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToArrayByteImage', name='add', priority=100.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$AddOp', name='add', priority=100.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$DivideOp', name='divide', priority=100.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.legacy.ui.LegacyUI', name='legacy', priority=100.0, enabled=true, pluginType=UserInterface > [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$MultiplyOp', name='multiply', priority=100.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$SubtractOp', name='subtract', priority=100.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ui.swing.overlay.EllipseJHotDrawAdapter', priority=99.0, enabled=true, pluginType=JHotDrawAdapter > [DEBUG] - class='net.imagej.ui.swing.tools.SwingEllipseTool', name='Oval', description='Oval selections', iconPath='/icons/tools/oval.png', priority=99.0, enabled=true, pluginType=Tool > [DEBUG] - class='net.imagej.operator.OpSubtract', name='Subtract', priority=99.0, enabled=true, pluginType=CalculatorOp > [DEBUG] - class='net.imagej.ui.swing.overlay.GeneralPathJHotDrawAdapter', priority=98.5, enabled=true, pluginType=JHotDrawAdapter > [DEBUG] - class='net.imagej.ui.swing.overlay.PolygonJHotDrawAdapter', priority=98.0, enabled=true, pluginType=JHotDrawAdapter > [DEBUG] - class='net.imagej.operator.OpMultiply', name='Multiply', priority=98.0, enabled=true, pluginType=CalculatorOp > [DEBUG] - class='net.imagej.ui.swing.tools.SwingPolygonTool', name='Polygon', description='Polygon overlays', iconPath='/icons/tools/polygon.png', priority=98.0, enabled=true, pluginType=Tool > [DEBUG] - class='net.imagej.ui.swing.overlay.LineJHotDrawAdapter', priority=97.0, enabled=true, pluginType=JHotDrawAdapter > [DEBUG] - class='net.imagej.operator.OpDivide', name='Divide', priority=97.0, enabled=true, pluginType=CalculatorOp > [DEBUG] - class='net.imagej.ui.swing.tools.SwingLineTool', name='Line', description='Straight line overlays', iconPath='/icons/tools/line.png', priority=97.0, enabled=true, pluginType=Tool > [DEBUG] - class='net.imagej.ui.swing.overlay.PolylineJHotDrawAdapter', priority=96.0, enabled=true, pluginType=JHotDrawAdapter > [DEBUG] - class='net.imagej.operator.OpAnd', name='AND', priority=96.0, enabled=true, pluginType=CalculatorOp > [DEBUG] - class='net.imagej.ui.swing.tools.SwingPolylineTool', name='Polyline', description='Polyline overlays', iconPath='/icons/tools/polyline.png', priority=96.0, enabled=true, pluginType=Tool > [DEBUG] - class='net.imagej.ui.swing.overlay.AngleJHotDrawAdapter', priority=95.0, enabled=true, pluginType=JHotDrawAdapter > [DEBUG] - class='net.imagej.ui.swing.tools.SwingAngleTool', name='Angle', description='Angle overlays', iconPath='/icons/tools/angle.png', priority=95.0, enabled=true, pluginType=Tool > [DEBUG] - class='net.imagej.operator.OpOr', name='OR', priority=95.0, enabled=true, pluginType=CalculatorOp > [DEBUG] - class='net.imagej.ui.swing.overlay.PointJHotDrawOverlay', priority=94.0, enabled=true, pluginType=JHotDrawAdapter > [DEBUG] - class='net.imagej.ui.swing.tools.SwingPointTool', name='Point', description='Point overlays', iconPath='/icons/tools/point.png', priority=94.0, enabled=true, pluginType=Tool > [DEBUG] - class='net.imagej.operator.OpXor', name='XOR', priority=94.0, enabled=true, pluginType=CalculatorOp > [DEBUG] - class='net.imagej.operator.OpMin', name='Min', priority=93.0, enabled=true, pluginType=CalculatorOp > [DEBUG] - class='net.imagej.operator.OpMax', name='Max', priority=92.0, enabled=true, pluginType=CalculatorOp > [DEBUG] - class='net.imagej.operator.OpAverage', name='Average', priority=91.0, enabled=true, pluginType=CalculatorOp > [DEBUG] - class='net.imagej.operator.OpDifference', name='Difference', priority=90.0, enabled=true, pluginType=CalculatorOp > [DEBUG] - class='net.imagej.operator.OpCopy', name='Copy', priority=89.0, enabled=true, pluginType=CalculatorOp > [DEBUG] - class='net.imagej.operator.OpTransparentZero', name='Transparent-zero', priority=88.0, enabled=true, pluginType=CalculatorOp > [DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.FastLAPTrackerFactory', priority=10.0, enabled=true, pluginType=SpotTrackerFactory > [DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.SimpleFastLAPTrackerFactory', priority=10.0, enabled=true, pluginType=SpotTrackerFactory > [DEBUG] - class='net.imagej.legacy.DefaultLegacyService', priority=1.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.ui.swing.widget.SwingChoiceRadioWidget', priority=1.0, enabled=true, pluginType=InputWidget > [DEBUG] - class='net.imagej.ops.onthefly.JavassistOptimizer', priority=1.0, enabled=true, pluginType=Optimizer > [DEBUG] - class='fiji.plugin.trackmate.visualization.threedviewer.SpotDisplayer3DFactory', priority=1.0, enabled=true, pluginType=ViewFactory > [DEBUG] - class='fiji.plugin.trackmate.tracking.kdtree.NearestNeighborTrackerFactory', priority=1.0, enabled=true, pluginType=SpotTrackerFactory > [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotContrastAndSNRAnalyzerFactory', priority=1.0, enabled=true, pluginType=SpotAnalyzerFactory > [DEBUG] - class='net.imagej.ops.invert.InvertII', name='invert', priority=1.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.AddConstantToDouble', name='add', priority=0.6, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.AddConstantToLong', name='add', priority=0.5, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.AddConstantToFloat', name='add', priority=0.4, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.AddConstantToInteger', name='add', priority=0.3, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.AddConstantToShort', name='add', priority=0.2, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.AddConstantToByte', name='add', priority=0.1, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.plugins.commands.assign.AndDataValuesWith', menu='Process > Math > AND...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.app.AboutImageJ', label='About ImageJ...', menu='Help > About ImageJ...', iconPath='/icons/commands/information.png', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.assign.AbsDataValues', menu='Process > Math > Abs...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionAdaptiveMedian', menu='Process > Noise > Noise Reduction > Adaptive Median', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.restructure.AddAxis', menu='Image > Axes > Add Axis...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.restructure.AddData', menu='Image > Data > Add Data...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.overlay.AddImage', menu='Image > Overlay > Add Image', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.assign.AddNoiseToDataValues', menu='Process > Noise > Add Noise...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.assign.AddSpecifiedNoiseToDataValues', menu='Process > Noise > Add Specified Noise...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.assign.AddToDataValues', menu='Process > Math > Add...', iconPath='/icons/commands/sum.png', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionAlphaTrimmedMean', menu='Process > Noise > Noise Reduction > Alpha Trimmed Mean', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.animation.AnimationOptions', menu='Image > Animation > Animation Options...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.options.OptionsAppearance', menu='Edit > Options > Appearance...', priority=0.0, enabled=true, pluginType=OptionsPlugin > [DEBUG] - class='net.imagej.ops.commands.threshold.GlobalThresholder', menu='Image > Threshold > Apply Threshold', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.options.OptionsArrowTool', menu='Edit > Options > Arrow Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin > [DEBUG] - class='net.imagej.plugins.commands.display.AutoContrast', menu='Image > Adjust > Auto-Contrast', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.axispos.AxisPositionBackward', menu='Image > Axes > Axis Position Backward', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.axispos.AxisPositionForward', menu='Image > Axes > Axis Position Forward', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.misc.Benchmark', menu='Plugins > Utilities > Benchmark', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.imglib.Binner', menu='Image > Transform > Bin...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.binary.Binarize', menu='Process > Binary > Binarize...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.display.interactive.BrightnessContrast', menu='Image > Adjust > Brightness/Contrast...', iconPath='/icons/commands/contrast.png', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.debug.ButtonDemo', menu='Plugins > Sandbox > Button Demo', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.display.CaptureImage', menu='Plugins > Utilities > Capture Image', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.display.CaptureScreen', menu='Plugins > Utilities > Capture Screen', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.typechange.TypeChanger', menu='Image > Type > Change...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.display.ChannelsTool', menu='Image > Color > Channels Tool...', iconPath='/icons/commands/color_wheel.png', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.options.OptionsChannels', menu='Edit > Options > Channels...', priority=0.0, enabled=true, pluginType=OptionsPlugin > [DEBUG] - class='org.scijava.plugins.commands.io.ClearRecent', label='Clear Recent', menu='File > Open Recent > Clear List', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='org.scijava.plugins.commands.display.Close', menu='File > Close', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.binary.CloseBinaryImage', menu='Process > Binary > Close', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='org.scijava.plugins.commands.display.CloseAll', menu='File > Close All', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.options.OptionsCompatibility', menu='Edit > Options > Compatibility...', priority=0.0, enabled=true, pluginType=OptionsPlugin > [DEBUG] - class='net.imagej.options.OptionsCompiler', menu='Edit > Options > Compiler...', priority=0.0, enabled=true, pluginType=OptionsPlugin > [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionContraharmonicMean', menu='Process > Noise > Noise Reduction > Contraharmonic Mean', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.options.OptionsConversions', menu='Edit > Options > Conversions...', priority=0.0, enabled=true, pluginType=OptionsPlugin > [DEBUG] - class='net.imagej.ops.commands.convert.ConvertImgPlus', menu='Image > Convert', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.ops.commands.convolve.Convolve', menu='Image > Convolve', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.app.CopyToSystem', menu='Edit > Copy To System', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.binary.CreateMask', menu='Process > Binary > Create Mask...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.app.CreateShortcut', menu='Plugins > Shortcuts > Create Shortcut...', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.imglib.CropImage', menu='Image > Crop', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.options.OptionsDicom', menu='Edit > Options > DICOM...', priority=0.0, enabled=true, pluginType=OptionsPlugin > [DEBUG] - class='net.imagej.options.OptionsOverlay', label='Default Overlay Settings', menu='Image > Overlay > Overlay Options...', priority=0.0, enabled=true, pluginType=OptionsPlugin > [DEBUG] - class='net.imagej.plugins.commands.restructure.DeleteAxis', menu='Image > Axes > Delete Axis...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.restructure.DeleteData', menu='Image > Data > Delete Data...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.display.interactive.DeleteThreshold', menu='Image > Adjust > Delete Threshold', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.display.DeselectOverlays', menu='Edit > Selection > Deselect Overlays', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='org.scijava.ui.swing.commands.DialogPromptDemo', menu='Plugins > Sandbox > Dialog Prompt Demo', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.binary.DilateBinaryImage', menu='Process > Binary > Dilate', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.assign.DivideDataValuesBy', menu='Process > Math > Divide...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='org.scijava.plugins.commands.debug.DumpStack', menu='Plugins > Debug > Dump Stack', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.imglib.DuplicateImage', menu='Image > Duplicate', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.imglib.DuplicateImageContext', menu='Duplicate...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsEast', menu='Process > Shadows > East', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.restructure.EditAxes', menu='Image > Axes > Edit Axes...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.assign.EquationDataValues', menu='Process > Math > Equation...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.binary.ErodeBinaryImage', menu='Process > Binary > Erode', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.assign.ExpDataValues', menu='Process > Math > Exp...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.assign.FillDataValues', menu='Edit > Fill', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='org.scijava.ui.swing.commands.CommandFinder', menu='Plugins > Utilities > Find Commands...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.neigh.FindEdges', menu='Process > Find Edges', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.display.Flatten', menu='Image > Overlay > Flatten', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.restructure.FlipAxis', menu='Image > Transform > Flip Axis', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.rotate.FlipHorizontally', menu='Image > Transform > Flip Horizontally', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.rotate.FlipVertically', menu='Image > Transform > Flip Vertically', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.tools.FloodFillToolConfig', label='Flood Fill Tool', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.options.OptionsFont', menu='Edit > Options > Fonts...', priority=0.0, enabled=true, pluginType=OptionsPlugin > [DEBUG] - class='net.imagej.plugins.commands.overlay.FromOverlayManager', menu='Image > Overlay > From Overlay Manager', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.assign.GammaDataValues', menu='Process > Math > Gamma...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.imglib.GaussianBlur', menu='Process > Filters > Gaussian Blur...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionGeometricMean', menu='Process > Noise > Noise Reduction > Geometric Mean', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionHarmonicMean', menu='Process > Noise > Noise Reduction > Harmonic Mean', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.display.HistogramPlot', menu='Analyze > Histogram Plot', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.calculator.ImageCalculator', menu='Process > Image Calculator...', iconPath='/icons/commands/calculator.png', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.io.OpenDataset', menu='File > Import > Image... ', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.io.SaveDataset', menu='File > Export > Image... ', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.app.ImageJWebsite', menu='Help > ImageJ Website...', iconPath='/icons/commands/world_link.png', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.legacy.ImageJ2Options', label='ImageJ2 Options', menu='Edit > Options > ImageJ2...', priority=0.0, enabled=true, pluginType=OptionsPlugin > [DEBUG] - class='net.imagej.options.OptionsInputOutput', menu='Edit > Options > Input/Output...', priority=0.0, enabled=true, pluginType=OptionsPlugin > [DEBUG] - class='net.imagej.plugins.commands.debug.InspectImg', menu='Plugins > Debug > Inspect Image', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='org.scijava.ui.swing.commands.InspectObjects', menu='Plugins > Debug > Inspect Objects', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='org.scijava.plugins.commands.debug.InvalidCommandDemo$InvalidCommand', menu='Plugins > Debug > Invalid Command', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.assign.InvertDataValues', menu='Edit > Invert...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.lut.LUTSelector', label='LUT Selector', menu='Image > Lookup Tables > Select...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.overlay.OverlayLabels', menu='Image > Overlay > Labels...', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.options.OptionsLineWidth', menu='Edit > Options > Line Width...', priority=0.0, enabled=true, pluginType=OptionsPlugin > [DEBUG] - class='net.imagej.plugins.commands.app.ListShortcuts', menu='Plugins > Shortcuts > List Shortcuts...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.assign.LogDataValues', menu='Process > Math > Log...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='org.scijava.ui.swing.options.OptionsLookAndFeel', menu='Edit > Options > Look and Feel...', priority=0.0, enabled=true, pluginType=OptionsPlugin > [DEBUG] - class='net.imagej.plugins.commands.binary.MakeBinary', menu='Process > Binary > Make Binary...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.overlay.ConvertToMask', menu='Process > Binary > Make Mask Overlay...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.debug.MandelbrotSetImage', menu='Plugins > Sandbox > Mandelbrot Set', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.assign.MaxDataValues', menu='Process > Math > Max...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMax', menu='Process > Noise > Noise Reduction > Maximum', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMean', menu='Process > Noise > Noise Reduction > Mean', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.debug.MeasurementDemo', menu='Plugins > Sandbox > Measurement Demo', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMedian', menu='Process > Noise > Noise Reduction > Median', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.options.OptionsMemoryAndThreads', menu='Edit > Options > Memory & Threads...', priority=0.0, enabled=true, pluginType=OptionsPlugin > [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMidpoint', menu='Process > Noise > Noise Reduction > Midpoint', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.assign.MinDataValues', menu='Process > Math > Min...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMin', menu='Process > Noise > Noise Reduction > Minimum', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.options.OptionsMisc', menu='Edit > Options > Misc...', priority=0.0, enabled=true, pluginType=OptionsPlugin > [DEBUG] - class='net.imagej.legacy.plugin.MixedWorldCommand', menu='Plugins > Sandbox > Mixed World Command', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.debug.MultidimImage', menu='Plugins > Sandbox > Multidimensional Test Image', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.assign.MultiplyDataValuesBy', menu='Process > Math > Multiply...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.imglib.NanBackground', menu='Process > Math > NaN Background', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.io.NewImage', label='New Image...', menu='File > New > Image...', iconPath='/icons/commands/picture.png', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNorth', menu='Process > Shadows > North', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNortheast', menu='Process > Shadows > Northeast', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNorthwest', menu='Process > Shadows > Northwest', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.assign.OrDataValuesWith', menu='Process > Math > OR...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.binary.OpenBinaryImage', menu='Process > Binary > Open', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='org.scijava.plugins.commands.io.OpenFile', menu='File > Open...', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomOriginalScale', menu='Image > Zoom > Original Scale', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.display.interactive.OrthogonalViews', menu='Image > Stacks > Orthogonal Views', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.ui.swing.commands.OverlayManager', menu='Image > Overlay > Overlay Manager', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.commands.overlay.OverlayProperties', label='Overlay Properties...', menu='Image > Overlay > Properties...', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.tools.PaintBrushToolConfig', label='Paintbrush Tool', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='org.scijava.plugins.commands.debug.ParamAssignOrder', menu='Plugins > Sandbox > Parameter Assignment Order', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='net.imagej.plugins.tools.PencilToolConfig', label='Pencil Tool', priority=0.0, enabled=true, pluginType=Command > [DEBUG] - class='fiji.DefaultFijiService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='fiji.patches.FijiAppConfiguration', priority=0.0, enabled=true, pluginType=LegacyAppConfiguration > [DEBUG] - class='fiji.patches.OldLegacyEditor', priority=0.0, enabled=true, pluginType=LegacyEditor > [DEBUG] - class='fiji.patches.OldAppConfiguration', priority=0.0, enabled=true, pluginType=LegacyAppConfiguration > [DEBUG] - class='net.imglib2.meta.units.DefaultUnitService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.ui.awt.widget.AWTObjectWidget', priority=0.0, enabled=true, pluginType=InputWidget > [DEBUG] - class='org.scijava.ui.awt.widget.AWTToggleWidget', priority=0.0, enabled=true, pluginType=InputWidget > [DEBUG] - class='org.scijava.ui.awt.widget.AWTChoiceWidget', priority=0.0, enabled=true, pluginType=InputWidget > [DEBUG] - class='org.scijava.ui.awt.widget.AWTNumberWidget', priority=0.0, enabled=true, pluginType=InputWidget > [DEBUG] - class='org.scijava.ui.awt.widget.AWTTextWidget', priority=0.0, enabled=true, pluginType=InputWidget > [DEBUG] - class='org.scijava.ui.awt.widget.AWTFileWidget', priority=0.0, enabled=true, pluginType=InputWidget > [DEBUG] - class='org.scijava.ui.awt.widget.AWTButtonWidget', priority=0.0, enabled=true, pluginType=InputWidget > [DEBUG] - class='net.imagej.plugins.uploaders.ssh.SSHFileUploader', priority=0.0, enabled=true, pluginType=Uploader > [DEBUG] - class='net.imagej.plugins.uploaders.ssh.SFTPFileUploader', priority=0.0, enabled=true, pluginType=Uploader > [DEBUG] - class='net.imagej.plugins.uploaders.webdav.WebDAVUploader', priority=0.0, enabled=true, pluginType=Uploader > [DEBUG] - class='org.scijava.plugins.text.markdown.MarkdownTextFormat', priority=0.0, enabled=true, pluginType=TextFormat > [DEBUG] - class='net.imagej.ui.awt.AWTRenderingService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='net.imagej.ui.awt.AWTScreenCaptureService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.object.DefaultObjectService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.convert.DefaultConverter', priority=0.0, enabled=true, pluginType=Converter > [DEBUG] - class='org.scijava.convert.DefaultConvertService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.input.DefaultInputService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.ui.DefaultUIService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.ui.dnd.DefaultDragAndDropService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.ui.dnd.ListDragAndDropHandler', priority=0.0, enabled=true, pluginType=DragAndDropHandler > [DEBUG] - class='org.scijava.ui.dnd.ScriptFileDragAndDropHandler', priority=0.0, enabled=true, pluginType=DragAndDropHandler > [DEBUG] - class='org.scijava.ui.console.UIArgument', priority=0.0, enabled=true, pluginType=ConsoleArgument > [DEBUG] - class='org.scijava.plugin.DefaultPluginService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.text.DefaultTextService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.display.DefaultDisplayService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.prefs.DefaultPrefService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.io.DefaultRecentFileService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.io.console.OpenArgument', priority=0.0, enabled=true, pluginType=ConsoleArgument > [DEBUG] - class='org.scijava.io.DefaultIOService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.widget.DefaultWidgetService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.menu.DefaultMenuService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.tool.DefaultToolService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.app.DefaultAppService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.app.DefaultStatusService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.module.DefaultModuleService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.welcome.DefaultWelcomeService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.thread.DefaultThreadService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.script.io.ScriptIOPlugin', priority=0.0, enabled=true, pluginType=IOPlugin > [DEBUG] - class='org.scijava.script.DefaultScriptHeaderService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.event.DefaultEventHistory', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.platform.DefaultPlatformService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.options.DefaultOptionsService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.command.DefaultCommandService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.command.console.RunArgument', priority=0.0, enabled=true, pluginType=ConsoleArgument > [DEBUG] - class='org.scijava.console.DefaultConsoleService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.SciJava', priority=0.0, enabled=true, pluginType=Gateway > [DEBUG] - class='net.imagej.operator.DefaultCalculatorService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='net.imagej.autoscale.DefaultAutoscaleService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='net.imagej.sampler.DefaultSamplerService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='net.imagej.lut.io.LUTIOPlugin', priority=0.0, enabled=true, pluginType=IOPlugin > [DEBUG] - class='net.imagej.display.DefaultDatasetView', priority=0.0, enabled=true, pluginType=DataView > [DEBUG] - class='net.imagej.display.DefaultImageDisplay', priority=0.0, enabled=true, pluginType=Display > [DEBUG] - class='net.imagej.display.DefaultZoomService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='net.imagej.display.DefaultOverlayService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='net.imagej.display.DefaultImageDisplayService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='net.imagej.display.DefaultOverlayView', priority=0.0, enabled=true, pluginType=DataView > [DEBUG] - class='net.imagej.display.DefaultWindowService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='net.imagej.types.DataType32BitSignedFloat', priority=0.0, enabled=true, pluginType=DataType > [DEBUG] - class='net.imagej.types.DataType12BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType > [DEBUG] - class='net.imagej.types.DataType64BitSignedFloat', priority=0.0, enabled=true, pluginType=DataType > [DEBUG] - class='net.imagej.types.DataType8BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType > [DEBUG] - class='net.imagej.types.DataType32BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType > [DEBUG] - class='net.imagej.types.DataType32BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType > [DEBUG] - class='net.imagej.types.DataType64BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType > [DEBUG] - class='net.imagej.types.DataType16BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType > [DEBUG] - class='net.imagej.types.DataType16BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType > [DEBUG] - class='net.imagej.types.DataType1BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType > [DEBUG] - class='net.imagej.types.DataType8BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType > [DEBUG] - class='net.imagej.types.DefaultDataTypeService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='net.imagej.DefaultImgPlusService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='net.imagej.minmax.DefaultMinMaxMethod', priority=0.0, enabled=true, pluginType=MinMaxMethod > [DEBUG] - class='net.imagej.ui.DefaultImageJUIService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='net.imagej.ui.dnd.LUTFileDragAndDropHandler', priority=0.0, enabled=true, pluginType=DragAndDropHandler > [DEBUG] - class='net.imagej.measure.DefaultStatisticsService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='net.imagej.measure.DefaultMeasurementService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='net.imagej.threshold.DefaultThresholdService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='net.imagej.animation.DefaultAnimationService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='net.imagej.table.DefaultTableDisplay', priority=0.0, enabled=true, pluginType=Display > [DEBUG] - class='net.imagej.DefaultDatasetService', priority=0.0, enabled=true, pluginType=Service > [DEBUG] - class='io.scif.io.URLHandle', priority=0.0, enabled=true, pluginType=IStreamAccess > [DEBUG] - class='io.scif.codec.LZWCodec', priority=0.0, enabled=true, pluginType=Codec > [DEBUG] - 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class='net.imagej.ops.map.MapRAI2View', name='map', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.map.MapII2View', name='map', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealMaxConstant', name='maxconstant', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealMinConstant', name='minconstant', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.misc.MinMaxRealType', name='minmax', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.statistics.moments.Moment2AboutMean', name='moment1aboutmean', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.statistics.moments.Moment1AboutMean', name='moment1aboutmean', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealMultiplyConstant', name='multiplyconstant', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealNearestInt', name='nearestint', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealNegate', name='negate', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.normalize.NormalizeRealType', name='normalize', aliases='norm', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.normalize.NormalizeII', name='normalize', aliases='norm', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealOrConstant', name='orconstant', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.threshold.Otsu', name='otsu', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealPowerConstant', name='powerconstant', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealReciprocal', name='reciprocal', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealRound', name='round', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.scale.ScaleImg', name='scale', aliases='norm', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSec', name='sec', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSech', name='sech', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSignum', name='signum', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSin', name='sin', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSinc', name='sinc', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSincPi', name='sincpi', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSinh', name='sinh', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSqr', name='sqr', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSqrt', name='sqrt', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealStep', name='step', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSubtractConstant', name='subtractconstant', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='org.scijava.ui.swing.sdi.SwingSDIUI', name='swing', priority=0.0, enabled=true, pluginType=UserInterface > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealTan', name='tan', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealTanh', name='tanh', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.threshold.PixThreshold', name='threshold', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.threshold.GlobalThreshold', name='threshold', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.threshold.LocalThreshold', name='threshold', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealUlp', name='ulp', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealUniformRandom', name='uniformrandom', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealXorConstant', name='xorconstant', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealZero', name='zero', priority=0.0, enabled=true, pluginType=Op > [DEBUG] - class='fiji.plugin.trackmate.tracking.ManualTrackerFactory', priority=-1.0, enabled=true, pluginType=SpotTrackerFactory > [DEBUG] - class='net.imagej.ops.map.ParallelMap', name='map', priority=-95.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.map.ParallelMapI2I', name='map', priority=-97.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.map.ParallelMapI2R', name='map', priority=-98.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.crop.CropImgPlus', name='crop', aliases='slice', priority=-99.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.crop.CropLabeling', name='crop', aliases='slice', priority=-99.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.map.MapII2II', name='map', priority=-99.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.project.parallel.DefaultProjectP', name='project', priority=-99.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.statistics.StdDevRealTypeDirect', name='stddev', priority=-99.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.statistics.VarianceRealTypeDirect', name='variance', priority=-99.0, enabled=true, pluginType=Op > [DEBUG] - class='org.scijava.ui.dnd.FileDragAndDropHandler', priority=-100.0, enabled=true, pluginType=DragAndDropHandler > [DEBUG] - class='org.scijava.display.DefaultTextDisplay', priority=-100.0, enabled=true, pluginType=Display > [DEBUG] - class='org.scijava.log.StderrLogService', priority=-100.0, enabled=true, pluginType=Service > [DEBUG] - class='org.scijava.platform.DefaultAppEventService', priority=-100.0, enabled=true, pluginType=Service > [DEBUG] - class='net.imagej.display.DummyScreenCaptureService', priority=-100.0, enabled=true, pluginType=Service > [DEBUG] - class='net.imagej.render.DummyRenderingService', priority=-100.0, enabled=true, pluginType=Service > [DEBUG] - class='net.imagej.io.DatasetIOPlugin', priority=-100.0, enabled=true, pluginType=IOPlugin > [DEBUG] - class='io.scif.formats.APNGFormat$APNGTranslator', priority=-100.0, enabled=true, pluginType=Translator > [DEBUG] - class='io.scif.formats.qt.NativeQTFormat$NativeQTTranslator', priority=-100.0, enabled=true, pluginType=Translator > [DEBUG] - class='io.scif.formats.FakeFormat$FakeTranslator', priority=-100.0, enabled=true, pluginType=Translator > [DEBUG] - class='io.scif.formats.MicromanagerFormat$MicromanagerTranslator', priority=-100.0, enabled=true, pluginType=Translator > [DEBUG] - class='io.scif.services.DefaultInitializeService', priority=-100.0, enabled=true, pluginType=Service > [DEBUG] - class='io.scif.formats.AVIFormat$Translator', priority=-100.0, enabled=true, pluginType=Translator > [DEBUG] - class='io.scif.formats.ICSFormat$ICSTranslator', priority=-100.0, enabled=true, pluginType=Translator > [DEBUG] - class='io.scif.formats.EPSFormat$EPSTranslator', priority=-100.0, enabled=true, pluginType=Translator > [DEBUG] - class='io.scif.formats.ImageIOFormat$ImageIOTranslator', priority=-100.0, enabled=true, pluginType=Translator > [DEBUG] - class='io.scif.formats.qt.LegacyQTFormat$LegacyQTTranslator', priority=-100.0, enabled=true, pluginType=Translator > [DEBUG] - class='net.imagej.legacy.plugin.DefaultLegacyOpener', priority=-100.0, enabled=true, pluginType=LegacyOpener > [DEBUG] - class='net.imagej.legacy.plugin.DefaultLegacyEditor', priority=-100.0, enabled=true, pluginType=LegacyEditor > [DEBUG] - class='org.scijava.plugins.scripting.java.MainJavaRunner', priority=-100.0, enabled=true, pluginType=JavaRunner > [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat$OMEXMLTranslator', priority=-100.0, enabled=true, pluginType=Translator > [DEBUG] - class='io.scif.formats.qt.LegacyQTFormat', name='QuickTime', priority=-100.0, enabled=true, pluginType=Format > [DEBUG] - class='org.scijava.app.SciJavaApp', name='SciJava', priority=-100.0, enabled=true, pluginType=App > [DEBUG] - class='io.scif.formats.JPEGTileFormat', name='Tile JPEG', priority=-100.0, enabled=true, pluginType=Format > [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToNumericType', name='add', priority=-100.0, enabled=true, pluginType=Op > [DEBUG] - class='org.scijava.ui.awt.AWTUI', name='awt', priority=-100.0, enabled=true, pluginType=UserInterface > [DEBUG] - class='net.imagej.ops.crop.CropRAI', name='crop', aliases='slice', priority=-100.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.map.MapII2RAI', name='map', priority=-100.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.map.MapRAI2III', name='map', priority=-100.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.map.MapI', name='map', priority=-100.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.neighborhood.MapNeighborhood', name='map', priority=-100.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.statistics.MaxRealType', name='max', priority=-100.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.statistics.MeanRealType', name='mean', priority=-100.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.statistics.MedianRealType', name='median', priority=-100.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.statistics.MinRealType', name='min', priority=-100.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.project.ProjectRAI2II', name='project', priority=-100.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.misc.SizeIterableInterval', name='size', priority=-100.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.statistics.StdDevRealType', name='stddev', priority=-100.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.statistics.SumRealType', name='sum', priority=-100.0, enabled=true, pluginType=Op > [DEBUG] - class='org.scijava.ui.swing.mdi.SwingMdiUI', name='swing-mdi', priority=-100.0, enabled=true, pluginType=UserInterface > [DEBUG] - class='net.imagej.ops.statistics.VarianceRealType', name='variance', priority=-100.0, enabled=true, pluginType=Op > [DEBUG] - class='org.scijava.text.io.TextIOPlugin', priority=-101.0, enabled=true, pluginType=IOPlugin > [DEBUG] - class='net.imagej.ops.map.MapI2I', name='map', priority=-101.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.plugins.tools.WandTool', name='Wand', description='Wand (tracing) tool', iconPath='/icons/tools/wand.png', priority=-110.0, enabled=false, pluginType=Tool > [DEBUG] - class='net.imagej.ui.swing.tools.SwingTextTool', name='Text', description='Text tool', iconPath='/icons/tools/text.png', priority=-115.0, enabled=false, pluginType=Tool > [DEBUG] - class='net.imagej.plugins.tools.ZoomTool', name='Zoom', description='Magnifying glass (or use "+" and "-" keys)', iconPath='/icons/tools/zoom.png', priority=-200.0, enabled=true, pluginType=Tool > [DEBUG] - class='net.imagej.plugins.tools.PanTool', name='Pan', description='Scrolling tool (or press space bar and drag)', iconPath='/icons/tools/pan.png', priority=-201.0, enabled=true, pluginType=Tool > [DEBUG] - class='net.imagej.plugins.tools.PaintBrushTool', name='Paintbrush', description='Paintbrush Tool', iconPath='/icons/tools/paintbrush.png', priority=-300.0, enabled=true, pluginType=Tool > [DEBUG] - class='net.imagej.plugins.tools.PencilTool', name='Pencil', description='Pencil Tool', iconPath='/icons/tools/pencil.png', priority=-301.0, enabled=true, pluginType=Tool > [DEBUG] - class='net.imagej.plugins.tools.SprayCanTool', name='SprayCan', label='Spray Can', description='Spray Can Tool', iconPath='/icons/tools/spray-can.png', priority=-303.0, enabled=true, pluginType=Tool > [DEBUG] - class='net.imagej.plugins.tools.FloodFillTool', name='FloodFill', label='Flood Fill', description='Flood Fill Tool', iconPath='/icons/tools/flood-fill.png', priority=-304.0, enabled=true, pluginType=Tool > [DEBUG] - class='net.imagej.plugins.tools.ArrowTool', name='Arrow', description='Arrow Tool', iconPath='/icons/tools/arrow.png', priority=-305.0, enabled=false, pluginType=Tool > [DEBUG] - class='net.imagej.plugins.tools.FgColorTool', name='Foreground', iconPath='/icons/tools/blank.png', priority=-500.0, enabled=true, pluginType=Tool > [DEBUG] - class='net.imagej.plugins.tools.BgColorTool', name='Background', iconPath='/icons/tools/blankBlack.png', priority=-501.0, enabled=true, pluginType=Tool > [DEBUG] - class='io.scif.ome.formats.OMETIFFFormat', priority=-9998.0, enabled=true, pluginType=Format > [DEBUG] - class='io.scif.ome.formats.OMETIFFFormat$OMETIFFTranslator', priority=-9998.0, enabled=true, pluginType=Translator > [DEBUG] - class='org.scijava.module.process.LoadInputsPreprocessor', priority=-9999.0, enabled=true, pluginType=PreprocessorPlugin > [DEBUG] - class='io.scif.formats.TIFFFormat$TIFFTranslator', priority=-9999.0, enabled=true, pluginType=Translator > [DEBUG] - class='io.scif.formats.TIFFFormat', name='Tagged Image File Format', priority=-9999.0, enabled=true, pluginType=Format > [DEBUG] - class='org.scijava.ui.FilePreprocessor', priority=-9999.5, enabled=true, pluginType=PreprocessorPlugin > [DEBUG] - class='org.scijava.ui.awt.widget.AWTInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin > [DEBUG] - class='org.scijava.plugins.text.plain.PlainTextFormat', priority=-10000.0, enabled=true, pluginType=TextFormat > [DEBUG] - class='org.scijava.display.DisplayPostprocessor', priority=-10000.0, enabled=true, pluginType=PostprocessorPlugin > [DEBUG] - class='io.scif.DefaultTranslator', priority=-10000.0, enabled=true, pluginType=Translator > [DEBUG] - class='net.imagej.legacy.ui.LegacyInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin > [DEBUG] - class='org.scijava.ui.swing.widget.SwingInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin > [DEBUG] - class='org.scijava.ui.swing.widget.SwingMdiInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin > [DEBUG] - class='net.imagej.ui.swing.overlay.DefaultJHotDrawAdapter', priority=-10000.0, enabled=true, pluginType=JHotDrawAdapter > [DEBUG] - class='org.scijava.platform.DefaultPlatform', name='Default', priority=-10000.0, enabled=true, pluginType=Platform > [DEBUG] - class='net.imagej.plugins.tools.AcceleratorHandler', name='Keyboard Shortcuts', priority=-10000.0, enabled=true, pluginType=Tool > [DEBUG] - class='io.scif.formats.MinimalTIFFFormat', name='Minimal TIFF', priority=-10000.0, enabled=true, pluginType=Format > [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToImageFunctional', name='add', priority=-10000.0, enabled=true, pluginType=Op > [DEBUG] - class='net.imagej.ops.chunker.InterleavedChunker', name='chunker', priority=-10000.0, enabled=true, pluginType=Op > [DEBUG] - class='org.scijava.module.process.CheckInputsPreprocessor', priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin > [DEBUG] - class='org.scijava.module.process.SaveInputsPreprocessor', priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin > [DEBUG] - class='io.scif.formats.TIFFJAIFormat', name='Tagged Image File Format', priority=-10001.0, enabled=true, pluginType=Format > [DEBUG] - class='net.imagej.ops.misc.SizeIterable', name='size', priority=-Infinity, enabled=true, pluginType=Op > [DEBUG] Created service 'org.scijava.plugin.DefaultPluginService' in 51 ms > [DEBUG] Creating service: org.scijava.object.DefaultObjectService > log4j:WARN No appenders could be found for logger (org.bushe.swing.event.EventService). > log4j:WARN Please initialize the log4j system properly. > log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info. > [DEBUG] Created service 'org.scijava.object.DefaultObjectService' in 72 ms > [DEBUG] Creating service: org.scijava.module.DefaultModuleService > [DEBUG] Creating service: org.scijava.prefs.DefaultPrefService > [DEBUG] Created service 'org.scijava.prefs.DefaultPrefService' in 4 ms > [DEBUG] Creating service: org.scijava.convert.DefaultConvertService > [DEBUG] Created service 'org.scijava.convert.DefaultConvertService' in 4 ms > [DEBUG] Created service 'org.scijava.module.DefaultModuleService' in 14 ms > [DEBUG] Creating service: org.scijava.command.DefaultCommandService > [DEBUG] Created service 'org.scijava.command.DefaultCommandService' in 36 ms > [DEBUG] Created service 'org.scijava.script.DefaultScriptService' in 184 ms > [DEBUG] Creating service: net.imagej.lut.DefaultLUTService > [DEBUG] Creating service: net.imagej.DefaultDatasetService > [DEBUG] Creating service: io.scif.services.DefaultFormatService > [DEBUG] Created service 'io.scif.services.DefaultFormatService' in 3 ms > [DEBUG] Creating service: net.imagej.types.DefaultDataTypeService > [INFO] Found 11 DataType plugins. > [DEBUG] Created service 'net.imagej.types.DefaultDataTypeService' in 40 ms > [DEBUG] Created service 'net.imagej.DefaultDatasetService' in 61 ms > [DEBUG] Creating service: org.scijava.display.DefaultDisplayService > [DEBUG] Created service 'org.scijava.display.DefaultDisplayService' in 5 ms > [DEBUG] Creating service: net.imagej.display.DefaultImageDisplayService > [DEBUG] Created service 'net.imagej.display.DefaultImageDisplayService' in 3 ms > [DEBUG] Created service 'net.imagej.lut.DefaultLUTService' in 74 ms > [DEBUG] Creating service: net.imagej.legacy.DefaultLegacyService > [DEBUG] Creating service: net.imagej.display.DefaultOverlayService > [DEBUG] Creating service: org.scijava.options.DefaultOptionsService > [DEBUG] Created service 'org.scijava.options.DefaultOptionsService' in 2 ms > [DEBUG] Creating service: net.imagej.ui.awt.AWTRenderingService > [DEBUG] Created service 'net.imagej.ui.awt.AWTRenderingService' in 1 ms > [DEBUG] Created service 'net.imagej.display.DefaultOverlayService' in 10 ms > [DEBUG] Creating service: net.imagej.threshold.DefaultThresholdService > [DEBUG] Created service 'net.imagej.threshold.DefaultThresholdService' in 4 ms > [DEBUG] Creating service: org.scijava.menu.DefaultMenuService > [DEBUG] Created service 'org.scijava.menu.DefaultMenuService' in 3 ms > [DEBUG] Creating service: org.scijava.app.DefaultStatusService > [DEBUG] Creating service: org.scijava.app.DefaultAppService > [DEBUG] Created service 'org.scijava.app.DefaultAppService' in 4 ms > [DEBUG] Created service 'org.scijava.app.DefaultStatusService' in 5 ms > [INFO] Found 8 ScriptLanguage plugins. > [INFO] Found 0 scripts > [INFO] Overriding Upload Sample Image; identifier: command:net.imagej.plugins.commands.upload.SampleImageUploader; jar: file:/opt/Fiji.app/jars/imagej-plugins-commands-0.2.6.jar > [INFO] Overriding Test FlowCam; identifier: script:/opt/Fiji.app/plugins/FlowCam/Test_FlowCam.ijm; jar: file:/opt/Fiji.app/jars/scijava-common-2.33.0.jar > [DEBUG] Created service 'net.imagej.legacy.DefaultLegacyService' in 685 ms > [DEBUG] Creating service: fiji.DefaultFijiService > [DEBUG] Created service 'fiji.DefaultFijiService' in 1 ms > [DEBUG] Creating service: net.imglib2.meta.units.DefaultUnitService > [DEBUG] Created service 'net.imglib2.meta.units.DefaultUnitService' in 44 ms > [DEBUG] Creating service: net.imagej.ui.awt.AWTScreenCaptureService > [DEBUG] Created service 'net.imagej.ui.awt.AWTScreenCaptureService' in 2 ms > [DEBUG] Creating service: org.scijava.input.DefaultInputService > [DEBUG] Created service 'org.scijava.input.DefaultInputService' in 6 ms > [DEBUG] Creating service: org.scijava.ui.DefaultUIService > [DEBUG] Creating service: org.scijava.platform.DefaultPlatformService > [DEBUG] Creating service: org.scijava.platform.DefaultAppEventService > [DEBUG] Created service 'org.scijava.platform.DefaultAppEventService' in 2 ms > [INFO] Found 1 Platform plugins. > [DEBUG] Configuring platform: org.scijava.platform.DefaultPlatform > [DEBUG] Created service 'org.scijava.platform.DefaultPlatformService' in 11 ms > [DEBUG] Creating service: org.scijava.tool.DefaultToolService > [DEBUG] Created service 'org.scijava.tool.DefaultToolService' in 5 ms > [DEBUG] Created service 'org.scijava.ui.DefaultUIService' in 23 ms > [DEBUG] Creating service: org.scijava.ui.dnd.DefaultDragAndDropService > [DEBUG] Created service 'org.scijava.ui.dnd.DefaultDragAndDropService' in 5 ms > [DEBUG] Creating service: org.scijava.text.DefaultTextService > [DEBUG] Created service 'org.scijava.text.DefaultTextService' in 3 ms > [DEBUG] Creating service: org.scijava.io.DefaultRecentFileService > [DEBUG] Created service 'org.scijava.io.DefaultRecentFileService' in 61 ms > [DEBUG] Creating service: org.scijava.io.DefaultIOService > [DEBUG] Created service 'org.scijava.io.DefaultIOService' in 4 ms > [DEBUG] Creating service: org.scijava.widget.DefaultWidgetService > [INFO] Found 22 InputWidget plugins. > [DEBUG] Created service 'org.scijava.widget.DefaultWidgetService' in 6 ms > [DEBUG] Creating service: org.scijava.welcome.DefaultWelcomeService > [DEBUG] Created service 'org.scijava.welcome.DefaultWelcomeService' in 2 ms > [DEBUG] Creating service: org.scijava.script.DefaultScriptHeaderService > [DEBUG] Created service 'org.scijava.script.DefaultScriptHeaderService' in 2 ms > [DEBUG] Creating service: org.scijava.event.DefaultEventHistory > [DEBUG] Created service 'org.scijava.event.DefaultEventHistory' in 2 ms > [DEBUG] Creating service: org.scijava.console.DefaultConsoleService > [DEBUG] Created service 'org.scijava.console.DefaultConsoleService' in 2 ms > [DEBUG] Creating service: net.imagej.operator.DefaultCalculatorService > [DEBUG] Created service 'net.imagej.operator.DefaultCalculatorService' in 2 ms > [DEBUG] Creating service: net.imagej.autoscale.DefaultAutoscaleService > [DEBUG] Created service 'net.imagej.autoscale.DefaultAutoscaleService' in 3 ms > [DEBUG] Creating service: net.imagej.sampler.DefaultSamplerService > [DEBUG] Created service 'net.imagej.sampler.DefaultSamplerService' in 3 ms > [DEBUG] Creating service: net.imagej.display.DefaultZoomService > [DEBUG] Created service 'net.imagej.display.DefaultZoomService' in 2 ms > [DEBUG] Creating service: net.imagej.display.DefaultWindowService > [DEBUG] Created service 'net.imagej.display.DefaultWindowService' in 2 ms > [DEBUG] Creating service: net.imagej.DefaultImgPlusService > [DEBUG] Created service 'net.imagej.DefaultImgPlusService' in 1 ms > [DEBUG] Creating service: net.imagej.ui.DefaultImageJUIService > [DEBUG] Created service 'net.imagej.ui.DefaultImageJUIService' in 1 ms > [DEBUG] Creating service: net.imagej.measure.DefaultStatisticsService > [DEBUG] Created service 'net.imagej.measure.DefaultStatisticsService' in 3 ms > [DEBUG] Creating service: net.imagej.measure.DefaultMeasurementService > [DEBUG] Created service 'net.imagej.measure.DefaultMeasurementService' in 1 ms > [DEBUG] Creating service: net.imagej.animation.DefaultAnimationService > [DEBUG] Created service 'net.imagej.animation.DefaultAnimationService' in 4 ms > [DEBUG] Creating service: io.scif.io.DefaultNIOService > [DEBUG] Created service 'io.scif.io.DefaultNIOService' in 2 ms > [DEBUG] Creating service: io.scif.img.converters.DefaultPlaneConverterService > [DEBUG] Created service 'io.scif.img.converters.DefaultPlaneConverterService' in 6 ms > [DEBUG] Creating service: io.scif.img.DefaultImgUtilityService > [DEBUG] Created service 'io.scif.img.DefaultImgUtilityService' in 5 ms > [DEBUG] Creating service: io.scif.gui.DefaultGUIService > [DEBUG] Created service 'io.scif.gui.DefaultGUIService' in 3 ms > [DEBUG] Creating service: io.scif.xml.DefaultXMLService > [DEBUG] Created service 'io.scif.xml.DefaultXMLService' in 22 ms > [DEBUG] Creating service: io.scif.refs.DefaultRefManagerService > [DEBUG] Created service 'io.scif.refs.DefaultRefManagerService' in 1 ms > [DEBUG] Creating service: io.scif.services.DefaultTranslatorService > [DEBUG] Created service 'io.scif.services.DefaultTranslatorService' in 2 ms > [DEBUG] Creating service: io.scif.codec.DefaultCodecService > [DEBUG] Created service 'io.scif.codec.DefaultCodecService' in 1 ms > [DEBUG] Creating service: io.scif.img.cell.cache.MapDBCache > [DEBUG] Created service 'io.scif.img.cell.cache.MapDBCache' in 8 ms > [DEBUG] Creating service: io.scif.DefaultMetadataService > [DEBUG] Created service 'io.scif.DefaultMetadataService' in 0 ms > [DEBUG] Creating service: io.scif.services.DefaultFilePatternService > [DEBUG] Created service 'io.scif.services.DefaultFilePatternService' in 2 ms > [DEBUG] Creating service: io.scif.formats.tiff.DefaultTiffService > [DEBUG] Created service 'io.scif.formats.tiff.DefaultTiffService' in 3 ms > [DEBUG] Creating service: io.scif.services.DefaultLocationService > [DEBUG] Created service 'io.scif.services.DefaultLocationService' in 1 ms > [DEBUG] Creating service: io.scif.services.JAIIIOServiceImpl > [DEBUG] Created service 'io.scif.services.JAIIIOServiceImpl' in 24 ms > [DEBUG] Creating service: io.scif.formats.qt.DefaultQTJavaService > [DEBUG] Created service 'io.scif.formats.qt.DefaultQTJavaService' in 5 ms > [DEBUG] Creating service: org.scijava.ui.swing.SwingIconService > [DEBUG] Created service 'org.scijava.ui.swing.SwingIconService' in 3 ms > [DEBUG] Creating service: org.scijava.plugins.scripting.java.DefaultJavaService > [DEBUG] Created service 'org.scijava.plugins.scripting.java.DefaultJavaService' in 2 ms > [DEBUG] Creating service: net.imagej.ui.swing.overlay.JHotDrawService > [DEBUG] Created service 'net.imagej.ui.swing.overlay.JHotDrawService' in 3 ms > [DEBUG] Creating service: net.imagej.updater.DefaultUpdateService > [DEBUG] Created service 'net.imagej.updater.DefaultUpdateService' in 7 ms > [DEBUG] Creating service: net.imagej.updater.DefaultUploaderService > [DEBUG] Created service 'net.imagej.updater.DefaultUploaderService' in 1 ms > [DEBUG] Creating service: net.imagej.ops.DefaultOpService > [DEBUG] Creating service: net.imagej.ops.DefaultOpMatchingService > [DEBUG] Created service 'net.imagej.ops.DefaultOpMatchingService' in 2 ms > [DEBUG] Created service 'net.imagej.ops.DefaultOpService' in 5 ms > [DEBUG] Creating service: net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor > [DEBUG] Created service 'net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor' in 1 ms > [DEBUG] Creating service: io.scif.ome.services.DefaultOMEXMLService > [DEBUG] Created service 'io.scif.ome.services.DefaultOMEXMLService' in 30 ms > [DEBUG] Creating service: io.scif.ome.services.DefaultOMEMetadataService > [DEBUG] Created service 'io.scif.ome.services.DefaultOMEMetadataService' in 11 ms > [DEBUG] Creating service: net.imagej.display.DummyScreenCaptureService > [DEBUG] Created service 'net.imagej.display.DummyScreenCaptureService' in 0 ms > [DEBUG] Creating service: net.imagej.render.DummyRenderingService > [DEBUG] Created service 'net.imagej.render.DummyRenderingService' in 1 ms > [DEBUG] Creating service: io.scif.services.DefaultInitializeService > [DEBUG] Created service 'io.scif.services.DefaultInitializeService' in 3 ms > [DEBUG] Received command line arguments: > [DEBUG] publish( > context = org.scijava.Context@7c92eb86 > consumed = false,null,null), called from non-EDT Thread:null > [DEBUG] -port7 > [DEBUG] -macro > [DEBUG] /home/btupper/hello.ijm > [DEBUG] -batch > [INFO] Found 11 ConsoleArgument plugins. > [ERROR] Skipping unsupported option -port7 > [DEBUG] publish( > context = org.scijava.Context@7c92eb86 > consumed = false,null,null), called from non-EDT Thread:null > [INFO] Discovered user interface: net.imagej.legacy.ui.LegacyUI > [INFO] Discovered user interface: org.scijava.ui.swing.sdi.SwingSDIUI > [INFO] Discovered user interface: org.scijava.ui.awt.AWTUI > [INFO] Discovered user interface: org.scijava.ui.swing.mdi.SwingMdiUI > [btupper@fcm-flow ~]$ -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html |
On Dec 16, 2014, at 7:19 PM, Rasband, Wayne (NIH/NIMH) [E] <[hidden email]> wrote:
> On Dec 16, 2014, at 3:11 PM, Ben Tupper <[hidden email]> wrote: >> >> Hello, >> >> I'm learning to use Fiji in a headless CentOS 6 environment. I first updated fiji using... >> >> $ fiji --update update >> >> >> I have a simple macro, '~/hello.ijm', adapted from this one... http://rsb.info.nih.gov/ij/macros/SaveTextFileDemo.txt >> >> // >> //START ~/hello.ijm >> // >> f = File.open("/home/btupper/hello.txt"); >> // use d2s() function (double to string) to specify decimal places >> for (i=0; i<=2*PI; i+=0.01) >> print(f, d2s(i,6) + " \t" + d2s(sin(i),6) + " \t" + d2s(cos(i),6)); >> // >> //FINISH ~/hello.ijm >> // >> >> I then run the macro from the command line. The macro successfully creates and populates the '~/hello.txt' file. However, I get log4j warnings and an error as shown below. (Note, I have pasted in below the entire output when I set the --debug flag.) > > You should report this bug using Fiji’s Help>Report a Bug command. The bug report will automatically provide more information about your setup and it will help the Fiji developers keep track of your bug report so that it is not forgotten. http://imagej.net/Bugs > > -wayne > >> [btupper@fcm-flow ~]$ fiji --headless -macro /home/btupper/hello.ijm >> log4j:WARN No appenders could be found for logger (org.bushe.swing.event.EventService). >> log4j:WARN Please initialize the log4j system properly. >> log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info. >> [ERROR] Skipping unsupported option -port7 >> >> Here is a bit more info about the Fiji installation. >> >> [btupper@fcm-flow ~]$ fiji --print-java-home >> /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24/ >> [btupper@fcm-flow ~]$ fiji --print-ij-dir >> /opt/Fiji.app >> >> >> Do I need to worry about the warnings? I can't locate any instructions for initializing log4j on the Fiji website. I have found these 3rd party instructions [ http://www.javabeat.net/baisc-steps-to-configure-log4j-using-xml-and-properties-file/ ] but I have no idea if the are appropriate for what Fiji requires. >> >> I also have no idea how to resolve the error. >> Ah - will do. I assumed that it was something in my own setup - I just noticed that log4j is distributed with Fiji in the Fiji/jars subdirectory. >> Any suggestions? >> >> Thanks! >> Ben >> >> >> P.S. Below is the command and output with --debug set >> >> [btupper@fcm-flow ~]$ fiji --debug --headless -macro /home/btupper/hello.ijm >> Available RAM: 3727MB, using 3/4 of that: 2796MB >> JRE not found in '/opt/Fiji.app/jre' >> JAVA_HOME contains a JRE: '/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre' >> Re-executing with correct library lookup path (/opt/Fiji.app/lib/linux64:/opt/Fiji.app/mm/linux64) >> Available RAM: 3727MB, using 3/4 of that: 2796MB >> JRE not found in '/opt/Fiji.app/jre' >> JAVA_HOME contains a JRE: '/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre' >> Appending missing -batch flag for headless operation. >> java -Dpython.cachedir.skip=true -Dplugins.dir=/opt/Fiji.app -Xmx2796m -Djava.awt.headless=true -Dapple.awt.UIElement=true -Xincgc -XX:PermSize=128m -Dsun.java.command=ImageJ -Djava.class.path=/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar -Dimagej.dir=/opt/Fiji.app -Dij.dir=/opt/Fiji.app -Dfiji.dir=/opt/Fiji.app -Dfiji.defaultLibPath=lib/amd64/server/libjvm.so -Dfiji.executable=/opt/Fiji.app/fiji-linux64 -Dij.executable=/opt/Fiji.app/fiji-linux64 -Djava.library.path=/opt/Fiji.app/lib/linux64:/opt/Fiji.app/mm/linux64 -Dij.debug=true -Dscijava.log.level=debug net.imagej.launcher.ClassLauncher -classpath /opt/Fiji.app/jars/ij-1.49m.jar fiji.Main -port7 -macro /home/btupper/hello.ijm -batch >> Using JAVA_HOME /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre >> Opening Java library /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre/lib/amd64/server/libjvm.so >> Adding option: -Djava.home=/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24/ >> Launching main class fiji.Main with parameters [-port7, -macro, /home/btupper/hello.ijm, -batch] >> Class loader = sun.misc.Launcher$AppClassLoader@b92d342 >> ij1.plugin.dirs: null >> $HOME/.plugins: /home/btupper/.plugins does not exist >> Launching main class net.imagej.Main with parameters [-port7, -macro, /home/btupper/hello.ijm, -batch] >> Class loader = sun.misc.Launcher$AppClassLoader@b92d342 >> Checking class loader: sun.misc.Launcher$AppClassLoader@b92d342 >> Checking URL: file:/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar >> Not Eclipse because first entry is: file:/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar >> [DEBUG] Creating service: org.scijava.event.DefaultEventService >> [DEBUG] Creating service: org.scijava.log.StderrLogService >> [DEBUG] Created service 'org.scijava.log.StderrLogService' in 2 ms >> [DEBUG] Creating service: org.scijava.thread.DefaultThreadService >> [DEBUG] Created service 'org.scijava.thread.DefaultThreadService' in 1 ms >> [DEBUG] Created service 'org.scijava.event.DefaultEventService' in 47 ms >> [DEBUG] Creating service: org.scijava.script.DefaultScriptService >> [DEBUG] Creating service: org.scijava.plugin.DefaultPluginService >> [INFO] Found 777 plugins. >> [DEBUG] - class='org.scijava.module.process.DebugPreprocessor', priority=Infinity, enabled=true, pluginType=PreprocessorPlugin >> [DEBUG] - class='org.scijava.module.process.DebugPostprocessor', priority=Infinity, enabled=true, pluginType=PostprocessorPlugin >> [DEBUG] - class='net.imagej.plugins.tools.KonamiHandler', name='Konami', priority=Infinity, enabled=true, pluginType=Tool >> [DEBUG] - class='org.scijava.event.DefaultEventService', priority=100000.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.module.process.ValidityPreprocessor', priority=10001.0, enabled=true, pluginType=PreprocessorPlugin >> [DEBUG] - class='org.scijava.ui.UIPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin >> [DEBUG] - class='org.scijava.display.ActiveDisplayPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin >> [DEBUG] - class='org.scijava.module.process.GatewayPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin >> [DEBUG] - class='org.scijava.module.process.ServicePreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin >> [DEBUG] - class='net.imagej.display.ActiveImagePreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin >> [DEBUG] - class='net.imagej.legacy.plugin.ActiveImagePlusPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin >> [DEBUG] - class='io.scif.bf.BioFormatsFormat', name='Bio-Formats Compatibility Format', priority=10000.0, enabled=true, pluginType=Format >> [DEBUG] - class='net.imagej.ops.slicer.SlicewiseRAI2RAI', name='slicemapper', priority=10000.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.arithmetic.add.parallel.AddConstantToArrayDoubleImageP', name='add', priority=111.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.arithmetic.add.parallel.AddConstantToArrayByteImageP', name='add', priority=110.0, enabled=true, pluginType=Op >> [DEBUG] - class='io.scif.ome.translators.OMETIFFTranslator$OMEtoOMETIFFTranslator', priority=101.0, enabled=true, pluginType=ToOMETranslator >> [DEBUG] - class='io.scif.ome.translators.OMETIFFTranslator$OMETIFFtoOMETranslator', priority=101.0, enabled=true, pluginType=FromOMETranslator >> [DEBUG] - class='io.scif.bf.ome.BioFormatsTranslator$BioFormatsOMETranslator', priority=101.0, enabled=true, pluginType=ToOMETranslator >> [DEBUG] - class='net.imagej.app.ToplevelImageJApp', name='ImageJ', priority=101.0, enabled=true, pluginType=App >> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToArrayDoubleImage', name='add', priority=101.0, enabled=true, pluginType=Op >> [DEBUG] - class='org.scijava.ui.awt.widget.AWTMessageWidget', priority=100.0, enabled=true, pluginType=InputWidget >> [DEBUG] - class='org.scijava.module.process.InitPreprocessor', priority=100.0, enabled=true, pluginType=PreprocessorPlugin >> [DEBUG] - class='org.scijava.script.DefaultScriptService', priority=100.0, enabled=true, pluginType=Service >> [DEBUG] - class='net.imagej.lut.DefaultLUTService', priority=100.0, enabled=true, pluginType=Service >> [DEBUG] - class='net.imagej.legacy.display.LegacyImageDisplayViewer', priority=100.0, enabled=true, pluginType=DisplayViewer >> [DEBUG] - class='net.imagej.legacy.display.LegacyTextDisplayViewer', priority=100.0, enabled=true, pluginType=DisplayViewer >> [DEBUG] - class='org.scijava.ui.swing.widget.SwingMessageWidget', priority=100.0, enabled=true, pluginType=InputWidget >> [DEBUG] - class='net.imagej.ui.swing.overlay.RectangleJHotDrawAdapter', priority=100.0, enabled=true, pluginType=JHotDrawAdapter >> [DEBUG] - class='net.imagej.ui.swing.overlay.ThresholdJHotDrawAdapter', priority=100.0, enabled=true, pluginType=JHotDrawAdapter >> [DEBUG] - class='io.scif.ome.translators.BMPTranslator$BMPOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator >> [DEBUG] - class='io.scif.ome.translators.MicromanagerTranslator$MicromanagerOMETranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator >> [DEBUG] - class='io.scif.ome.translators.OBFTranslator$OBFOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator >> [DEBUG] - class='io.scif.ome.translators.TIFFTranslator$TIFFOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator >> [DEBUG] - class='io.scif.ome.translators.TIFFTranslator$OMETIFFTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator >> [DEBUG] - class='io.scif.ome.translators.APNGTranslator$OMEAPNGTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator >> [DEBUG] - class='io.scif.ome.translators.APNGTranslator$APNGOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator >> [DEBUG] - class='io.scif.ome.translators.ICSTranslator$OMEICSTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator >> [DEBUG] - class='io.scif.ome.translators.ICSTranslator$ICSOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator >> [DEBUG] - class='io.scif.ome.translators.DICOMTranslator$DICOMOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator >> [DEBUG] - class='io.scif.ome.translators.NRRDTranslator$NRRDOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator >> [DEBUG] - class='io.scif.ome.translators.EPSTranslator$OMEEPSTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator >> [DEBUG] - class='net.imagej.operator.OpAdd', name='Add', priority=100.0, enabled=true, pluginType=CalculatorOp >> [DEBUG] - class='net.imagej.app.ImageJApp', name='ImageJ', priority=100.0, enabled=true, pluginType=App >> [DEBUG] - class='net.imagej.ui.swing.tools.SwingRectangleTool', name='Rectangle', description='Rectangular overlays', iconPath='/icons/tools/rectangle.png', priority=100.0, enabled=true, pluginType=Tool >> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToArrayByteImage', name='add', priority=100.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$AddOp', name='add', priority=100.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$DivideOp', name='divide', priority=100.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.legacy.ui.LegacyUI', name='legacy', priority=100.0, enabled=true, pluginType=UserInterface >> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$MultiplyOp', name='multiply', priority=100.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$SubtractOp', name='subtract', priority=100.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ui.swing.overlay.EllipseJHotDrawAdapter', priority=99.0, enabled=true, pluginType=JHotDrawAdapter >> [DEBUG] - class='net.imagej.ui.swing.tools.SwingEllipseTool', name='Oval', description='Oval selections', iconPath='/icons/tools/oval.png', priority=99.0, enabled=true, pluginType=Tool >> [DEBUG] - class='net.imagej.operator.OpSubtract', name='Subtract', priority=99.0, enabled=true, pluginType=CalculatorOp >> [DEBUG] - class='net.imagej.ui.swing.overlay.GeneralPathJHotDrawAdapter', priority=98.5, enabled=true, pluginType=JHotDrawAdapter >> [DEBUG] - class='net.imagej.ui.swing.overlay.PolygonJHotDrawAdapter', priority=98.0, enabled=true, pluginType=JHotDrawAdapter >> [DEBUG] - class='net.imagej.operator.OpMultiply', name='Multiply', priority=98.0, enabled=true, pluginType=CalculatorOp >> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPolygonTool', name='Polygon', description='Polygon overlays', iconPath='/icons/tools/polygon.png', priority=98.0, enabled=true, pluginType=Tool >> [DEBUG] - class='net.imagej.ui.swing.overlay.LineJHotDrawAdapter', priority=97.0, enabled=true, pluginType=JHotDrawAdapter >> [DEBUG] - class='net.imagej.operator.OpDivide', name='Divide', priority=97.0, enabled=true, pluginType=CalculatorOp >> [DEBUG] - class='net.imagej.ui.swing.tools.SwingLineTool', name='Line', description='Straight line overlays', iconPath='/icons/tools/line.png', priority=97.0, enabled=true, pluginType=Tool >> [DEBUG] - class='net.imagej.ui.swing.overlay.PolylineJHotDrawAdapter', priority=96.0, enabled=true, pluginType=JHotDrawAdapter >> [DEBUG] - class='net.imagej.operator.OpAnd', name='AND', priority=96.0, enabled=true, pluginType=CalculatorOp >> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPolylineTool', name='Polyline', description='Polyline overlays', iconPath='/icons/tools/polyline.png', priority=96.0, enabled=true, pluginType=Tool >> [DEBUG] - class='net.imagej.ui.swing.overlay.AngleJHotDrawAdapter', priority=95.0, enabled=true, pluginType=JHotDrawAdapter >> [DEBUG] - class='net.imagej.ui.swing.tools.SwingAngleTool', name='Angle', description='Angle overlays', iconPath='/icons/tools/angle.png', priority=95.0, enabled=true, pluginType=Tool >> [DEBUG] - class='net.imagej.operator.OpOr', name='OR', priority=95.0, enabled=true, pluginType=CalculatorOp >> [DEBUG] - class='net.imagej.ui.swing.overlay.PointJHotDrawOverlay', priority=94.0, enabled=true, pluginType=JHotDrawAdapter >> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPointTool', name='Point', description='Point overlays', iconPath='/icons/tools/point.png', priority=94.0, enabled=true, pluginType=Tool >> [DEBUG] - class='net.imagej.operator.OpXor', name='XOR', priority=94.0, enabled=true, pluginType=CalculatorOp >> [DEBUG] - class='net.imagej.operator.OpMin', name='Min', priority=93.0, enabled=true, pluginType=CalculatorOp >> [DEBUG] - class='net.imagej.operator.OpMax', name='Max', priority=92.0, enabled=true, pluginType=CalculatorOp >> [DEBUG] - class='net.imagej.operator.OpAverage', name='Average', priority=91.0, enabled=true, pluginType=CalculatorOp >> [DEBUG] - class='net.imagej.operator.OpDifference', name='Difference', priority=90.0, enabled=true, pluginType=CalculatorOp >> [DEBUG] - class='net.imagej.operator.OpCopy', name='Copy', priority=89.0, enabled=true, pluginType=CalculatorOp >> [DEBUG] - class='net.imagej.operator.OpTransparentZero', name='Transparent-zero', priority=88.0, enabled=true, pluginType=CalculatorOp >> [DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.FastLAPTrackerFactory', priority=10.0, enabled=true, pluginType=SpotTrackerFactory >> [DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.SimpleFastLAPTrackerFactory', priority=10.0, enabled=true, pluginType=SpotTrackerFactory >> [DEBUG] - class='net.imagej.legacy.DefaultLegacyService', priority=1.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.ui.swing.widget.SwingChoiceRadioWidget', priority=1.0, enabled=true, pluginType=InputWidget >> [DEBUG] - class='net.imagej.ops.onthefly.JavassistOptimizer', priority=1.0, enabled=true, pluginType=Optimizer >> [DEBUG] - class='fiji.plugin.trackmate.visualization.threedviewer.SpotDisplayer3DFactory', priority=1.0, enabled=true, pluginType=ViewFactory >> [DEBUG] - class='fiji.plugin.trackmate.tracking.kdtree.NearestNeighborTrackerFactory', priority=1.0, enabled=true, pluginType=SpotTrackerFactory >> [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotContrastAndSNRAnalyzerFactory', priority=1.0, enabled=true, pluginType=SpotAnalyzerFactory >> [DEBUG] - class='net.imagej.ops.invert.InvertII', name='invert', priority=1.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.AddConstantToDouble', name='add', priority=0.6, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.AddConstantToLong', name='add', priority=0.5, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.AddConstantToFloat', name='add', priority=0.4, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.AddConstantToInteger', name='add', priority=0.3, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.AddConstantToShort', name='add', priority=0.2, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.AddConstantToByte', name='add', priority=0.1, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.plugins.commands.assign.AndDataValuesWith', menu='Process > Math > AND...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.app.AboutImageJ', label='About ImageJ...', menu='Help > About ImageJ...', iconPath='/icons/commands/information.png', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.AbsDataValues', menu='Process > Math > Abs...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionAdaptiveMedian', menu='Process > Noise > Noise Reduction > Adaptive Median', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.restructure.AddAxis', menu='Image > Axes > Add Axis...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.restructure.AddData', menu='Image > Data > Add Data...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.overlay.AddImage', menu='Image > Overlay > Add Image', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.AddNoiseToDataValues', menu='Process > Noise > Add Noise...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.AddSpecifiedNoiseToDataValues', menu='Process > Noise > Add Specified Noise...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.AddToDataValues', menu='Process > Math > Add...', iconPath='/icons/commands/sum.png', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionAlphaTrimmedMean', menu='Process > Noise > Noise Reduction > Alpha Trimmed Mean', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.animation.AnimationOptions', menu='Image > Animation > Animation Options...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.options.OptionsAppearance', menu='Edit > Options > Appearance...', priority=0.0, enabled=true, pluginType=OptionsPlugin >> [DEBUG] - class='net.imagej.ops.commands.threshold.GlobalThresholder', menu='Image > Threshold > Apply Threshold', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.options.OptionsArrowTool', menu='Edit > Options > Arrow Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin >> [DEBUG] - class='net.imagej.plugins.commands.display.AutoContrast', menu='Image > Adjust > Auto-Contrast', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.axispos.AxisPositionBackward', menu='Image > Axes > Axis Position Backward', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.axispos.AxisPositionForward', menu='Image > Axes > Axis Position Forward', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.misc.Benchmark', menu='Plugins > Utilities > Benchmark', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.imglib.Binner', menu='Image > Transform > Bin...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.binary.Binarize', menu='Process > Binary > Binarize...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.display.interactive.BrightnessContrast', menu='Image > Adjust > Brightness/Contrast...', iconPath='/icons/commands/contrast.png', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.debug.ButtonDemo', menu='Plugins > Sandbox > Button Demo', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.display.CaptureImage', menu='Plugins > Utilities > Capture Image', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.display.CaptureScreen', menu='Plugins > Utilities > Capture Screen', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.typechange.TypeChanger', menu='Image > Type > Change...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.display.ChannelsTool', menu='Image > Color > Channels Tool...', iconPath='/icons/commands/color_wheel.png', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.options.OptionsChannels', menu='Edit > Options > Channels...', priority=0.0, enabled=true, pluginType=OptionsPlugin >> [DEBUG] - class='org.scijava.plugins.commands.io.ClearRecent', label='Clear Recent', menu='File > Open Recent > Clear List', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='org.scijava.plugins.commands.display.Close', menu='File > Close', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.binary.CloseBinaryImage', menu='Process > Binary > Close', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='org.scijava.plugins.commands.display.CloseAll', menu='File > Close All', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.options.OptionsCompatibility', menu='Edit > Options > Compatibility...', priority=0.0, enabled=true, pluginType=OptionsPlugin >> [DEBUG] - class='net.imagej.options.OptionsCompiler', menu='Edit > Options > Compiler...', priority=0.0, enabled=true, pluginType=OptionsPlugin >> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionContraharmonicMean', menu='Process > Noise > Noise Reduction > Contraharmonic Mean', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.options.OptionsConversions', menu='Edit > Options > Conversions...', priority=0.0, enabled=true, pluginType=OptionsPlugin >> [DEBUG] - class='net.imagej.ops.commands.convert.ConvertImgPlus', menu='Image > Convert', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.ops.commands.convolve.Convolve', menu='Image > Convolve', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.app.CopyToSystem', menu='Edit > Copy To System', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.binary.CreateMask', menu='Process > Binary > Create Mask...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.app.CreateShortcut', menu='Plugins > Shortcuts > Create Shortcut...', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.imglib.CropImage', menu='Image > Crop', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.options.OptionsDicom', menu='Edit > Options > DICOM...', priority=0.0, enabled=true, pluginType=OptionsPlugin >> [DEBUG] - class='net.imagej.options.OptionsOverlay', label='Default Overlay Settings', menu='Image > Overlay > Overlay Options...', priority=0.0, enabled=true, pluginType=OptionsPlugin >> [DEBUG] - class='net.imagej.plugins.commands.restructure.DeleteAxis', menu='Image > Axes > Delete Axis...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.restructure.DeleteData', menu='Image > Data > Delete Data...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.display.interactive.DeleteThreshold', menu='Image > Adjust > Delete Threshold', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.display.DeselectOverlays', menu='Edit > Selection > Deselect Overlays', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='org.scijava.ui.swing.commands.DialogPromptDemo', menu='Plugins > Sandbox > Dialog Prompt Demo', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.binary.DilateBinaryImage', menu='Process > Binary > Dilate', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.DivideDataValuesBy', menu='Process > Math > Divide...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='org.scijava.plugins.commands.debug.DumpStack', menu='Plugins > Debug > Dump Stack', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.imglib.DuplicateImage', menu='Image > Duplicate', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.imglib.DuplicateImageContext', menu='Duplicate...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsEast', menu='Process > Shadows > East', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.restructure.EditAxes', menu='Image > Axes > Edit Axes...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.EquationDataValues', menu='Process > Math > Equation...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.binary.ErodeBinaryImage', menu='Process > Binary > Erode', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.ExpDataValues', menu='Process > Math > Exp...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.FillDataValues', menu='Edit > Fill', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='org.scijava.ui.swing.commands.CommandFinder', menu='Plugins > Utilities > Find Commands...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.neigh.FindEdges', menu='Process > Find Edges', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.display.Flatten', menu='Image > Overlay > Flatten', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.restructure.FlipAxis', menu='Image > Transform > Flip Axis', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.rotate.FlipHorizontally', menu='Image > Transform > Flip Horizontally', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.rotate.FlipVertically', menu='Image > Transform > Flip Vertically', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.tools.FloodFillToolConfig', label='Flood Fill Tool', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.options.OptionsFont', menu='Edit > Options > Fonts...', priority=0.0, enabled=true, pluginType=OptionsPlugin >> [DEBUG] - class='net.imagej.plugins.commands.overlay.FromOverlayManager', menu='Image > Overlay > From Overlay Manager', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.GammaDataValues', menu='Process > Math > Gamma...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.imglib.GaussianBlur', menu='Process > Filters > Gaussian Blur...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionGeometricMean', menu='Process > Noise > Noise Reduction > Geometric Mean', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionHarmonicMean', menu='Process > Noise > Noise Reduction > Harmonic Mean', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.display.HistogramPlot', menu='Analyze > Histogram Plot', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.calculator.ImageCalculator', menu='Process > Image Calculator...', iconPath='/icons/commands/calculator.png', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.io.OpenDataset', menu='File > Import > Image... ', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.io.SaveDataset', menu='File > Export > Image... ', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.app.ImageJWebsite', menu='Help > ImageJ Website...', iconPath='/icons/commands/world_link.png', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.legacy.ImageJ2Options', label='ImageJ2 Options', menu='Edit > Options > ImageJ2...', priority=0.0, enabled=true, pluginType=OptionsPlugin >> [DEBUG] - class='net.imagej.options.OptionsInputOutput', menu='Edit > Options > Input/Output...', priority=0.0, enabled=true, pluginType=OptionsPlugin >> [DEBUG] - class='net.imagej.plugins.commands.debug.InspectImg', menu='Plugins > Debug > Inspect Image', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='org.scijava.ui.swing.commands.InspectObjects', menu='Plugins > Debug > Inspect Objects', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='org.scijava.plugins.commands.debug.InvalidCommandDemo$InvalidCommand', menu='Plugins > Debug > Invalid Command', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.InvertDataValues', menu='Edit > Invert...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.lut.LUTSelector', label='LUT Selector', menu='Image > Lookup Tables > Select...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.overlay.OverlayLabels', menu='Image > Overlay > Labels...', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.options.OptionsLineWidth', menu='Edit > Options > Line Width...', priority=0.0, enabled=true, pluginType=OptionsPlugin >> [DEBUG] - class='net.imagej.plugins.commands.app.ListShortcuts', menu='Plugins > Shortcuts > List Shortcuts...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.LogDataValues', menu='Process > Math > Log...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='org.scijava.ui.swing.options.OptionsLookAndFeel', menu='Edit > Options > Look and Feel...', priority=0.0, enabled=true, pluginType=OptionsPlugin >> [DEBUG] - class='net.imagej.plugins.commands.binary.MakeBinary', menu='Process > Binary > Make Binary...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.overlay.ConvertToMask', menu='Process > Binary > Make Mask Overlay...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.debug.MandelbrotSetImage', menu='Plugins > Sandbox > Mandelbrot Set', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.MaxDataValues', menu='Process > Math > Max...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMax', menu='Process > Noise > Noise Reduction > Maximum', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMean', menu='Process > Noise > Noise Reduction > Mean', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.debug.MeasurementDemo', menu='Plugins > Sandbox > Measurement Demo', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMedian', menu='Process > Noise > Noise Reduction > Median', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.options.OptionsMemoryAndThreads', menu='Edit > Options > Memory & Threads...', priority=0.0, enabled=true, pluginType=OptionsPlugin >> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMidpoint', menu='Process > Noise > Noise Reduction > Midpoint', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.MinDataValues', menu='Process > Math > Min...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMin', menu='Process > Noise > Noise Reduction > Minimum', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.options.OptionsMisc', menu='Edit > Options > Misc...', priority=0.0, enabled=true, pluginType=OptionsPlugin >> [DEBUG] - class='net.imagej.legacy.plugin.MixedWorldCommand', menu='Plugins > Sandbox > Mixed World Command', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.debug.MultidimImage', menu='Plugins > Sandbox > Multidimensional Test Image', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.MultiplyDataValuesBy', menu='Process > Math > Multiply...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.imglib.NanBackground', menu='Process > Math > NaN Background', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.io.NewImage', label='New Image...', menu='File > New > Image...', iconPath='/icons/commands/picture.png', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNorth', menu='Process > Shadows > North', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNortheast', menu='Process > Shadows > Northeast', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNorthwest', menu='Process > Shadows > Northwest', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.OrDataValuesWith', menu='Process > Math > OR...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.binary.OpenBinaryImage', menu='Process > Binary > Open', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='org.scijava.plugins.commands.io.OpenFile', menu='File > Open...', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomOriginalScale', menu='Image > Zoom > Original Scale', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.display.interactive.OrthogonalViews', menu='Image > Stacks > Orthogonal Views', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.ui.swing.commands.OverlayManager', menu='Image > Overlay > Overlay Manager', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.overlay.OverlayProperties', label='Overlay Properties...', menu='Image > Overlay > Properties...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.tools.PaintBrushToolConfig', label='Paintbrush Tool', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='org.scijava.plugins.commands.debug.ParamAssignOrder', menu='Plugins > Sandbox > Parameter Assignment Order', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.tools.PencilToolConfig', label='Pencil Tool', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='fiji.DefaultFijiService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='fiji.patches.FijiAppConfiguration', priority=0.0, enabled=true, pluginType=LegacyAppConfiguration >> [DEBUG] - class='fiji.patches.OldLegacyEditor', priority=0.0, enabled=true, pluginType=LegacyEditor >> [DEBUG] - class='fiji.patches.OldAppConfiguration', priority=0.0, enabled=true, pluginType=LegacyAppConfiguration >> [DEBUG] - class='net.imglib2.meta.units.DefaultUnitService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.ui.awt.widget.AWTObjectWidget', priority=0.0, enabled=true, pluginType=InputWidget >> [DEBUG] - class='org.scijava.ui.awt.widget.AWTToggleWidget', priority=0.0, enabled=true, pluginType=InputWidget >> [DEBUG] - class='org.scijava.ui.awt.widget.AWTChoiceWidget', priority=0.0, enabled=true, pluginType=InputWidget >> [DEBUG] - class='org.scijava.ui.awt.widget.AWTNumberWidget', priority=0.0, enabled=true, pluginType=InputWidget >> [DEBUG] - class='org.scijava.ui.awt.widget.AWTTextWidget', priority=0.0, enabled=true, pluginType=InputWidget >> [DEBUG] - class='org.scijava.ui.awt.widget.AWTFileWidget', priority=0.0, enabled=true, pluginType=InputWidget >> [DEBUG] - class='org.scijava.ui.awt.widget.AWTButtonWidget', priority=0.0, enabled=true, pluginType=InputWidget >> [DEBUG] - class='net.imagej.plugins.uploaders.ssh.SSHFileUploader', priority=0.0, enabled=true, pluginType=Uploader >> [DEBUG] - class='net.imagej.plugins.uploaders.ssh.SFTPFileUploader', priority=0.0, enabled=true, pluginType=Uploader >> [DEBUG] - class='net.imagej.plugins.uploaders.webdav.WebDAVUploader', priority=0.0, enabled=true, pluginType=Uploader >> [DEBUG] - class='org.scijava.plugins.text.markdown.MarkdownTextFormat', priority=0.0, enabled=true, pluginType=TextFormat >> [DEBUG] - class='net.imagej.ui.awt.AWTRenderingService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='net.imagej.ui.awt.AWTScreenCaptureService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.object.DefaultObjectService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.convert.DefaultConverter', priority=0.0, enabled=true, pluginType=Converter >> [DEBUG] - class='org.scijava.convert.DefaultConvertService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.input.DefaultInputService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.ui.DefaultUIService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.ui.dnd.DefaultDragAndDropService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.ui.dnd.ListDragAndDropHandler', priority=0.0, enabled=true, pluginType=DragAndDropHandler >> [DEBUG] - class='org.scijava.ui.dnd.ScriptFileDragAndDropHandler', priority=0.0, enabled=true, pluginType=DragAndDropHandler >> [DEBUG] - class='org.scijava.ui.console.UIArgument', priority=0.0, enabled=true, pluginType=ConsoleArgument >> [DEBUG] - class='org.scijava.plugin.DefaultPluginService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.text.DefaultTextService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.display.DefaultDisplayService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.prefs.DefaultPrefService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.io.DefaultRecentFileService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.io.console.OpenArgument', priority=0.0, enabled=true, pluginType=ConsoleArgument >> [DEBUG] - class='org.scijava.io.DefaultIOService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.widget.DefaultWidgetService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.menu.DefaultMenuService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.tool.DefaultToolService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.app.DefaultAppService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.app.DefaultStatusService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.module.DefaultModuleService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.welcome.DefaultWelcomeService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.thread.DefaultThreadService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.script.io.ScriptIOPlugin', priority=0.0, enabled=true, pluginType=IOPlugin >> [DEBUG] - class='org.scijava.script.DefaultScriptHeaderService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.event.DefaultEventHistory', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.platform.DefaultPlatformService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.options.DefaultOptionsService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.command.DefaultCommandService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.command.console.RunArgument', priority=0.0, enabled=true, pluginType=ConsoleArgument >> [DEBUG] - class='org.scijava.console.DefaultConsoleService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.SciJava', priority=0.0, enabled=true, pluginType=Gateway >> [DEBUG] - class='net.imagej.operator.DefaultCalculatorService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='net.imagej.autoscale.DefaultAutoscaleService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='net.imagej.sampler.DefaultSamplerService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='net.imagej.lut.io.LUTIOPlugin', priority=0.0, enabled=true, pluginType=IOPlugin >> [DEBUG] - class='net.imagej.display.DefaultDatasetView', priority=0.0, enabled=true, pluginType=DataView >> [DEBUG] - class='net.imagej.display.DefaultImageDisplay', priority=0.0, enabled=true, pluginType=Display >> [DEBUG] - class='net.imagej.display.DefaultZoomService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='net.imagej.display.DefaultOverlayService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='net.imagej.display.DefaultImageDisplayService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='net.imagej.display.DefaultOverlayView', priority=0.0, enabled=true, pluginType=DataView >> [DEBUG] - class='net.imagej.display.DefaultWindowService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='net.imagej.types.DataType32BitSignedFloat', priority=0.0, enabled=true, pluginType=DataType >> [DEBUG] - class='net.imagej.types.DataType12BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType >> [DEBUG] - class='net.imagej.types.DataType64BitSignedFloat', priority=0.0, enabled=true, pluginType=DataType >> [DEBUG] - class='net.imagej.types.DataType8BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType >> [DEBUG] - class='net.imagej.types.DataType32BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType >> [DEBUG] - class='net.imagej.types.DataType32BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType >> [DEBUG] - class='net.imagej.types.DataType64BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType >> [DEBUG] - class='net.imagej.types.DataType16BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType >> [DEBUG] - class='net.imagej.types.DataType16BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType >> [DEBUG] - class='net.imagej.types.DataType1BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType >> [DEBUG] - class='net.imagej.types.DataType8BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType >> [DEBUG] - class='net.imagej.types.DefaultDataTypeService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='net.imagej.DefaultImgPlusService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='net.imagej.minmax.DefaultMinMaxMethod', priority=0.0, enabled=true, pluginType=MinMaxMethod >> [DEBUG] - class='net.imagej.ui.DefaultImageJUIService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='net.imagej.ui.dnd.LUTFileDragAndDropHandler', priority=0.0, enabled=true, pluginType=DragAndDropHandler >> [DEBUG] - class='net.imagej.measure.DefaultStatisticsService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='net.imagej.measure.DefaultMeasurementService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='net.imagej.threshold.DefaultThresholdService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='net.imagej.animation.DefaultAnimationService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='net.imagej.table.DefaultTableDisplay', priority=0.0, enabled=true, pluginType=Display >> [DEBUG] - class='net.imagej.DefaultDatasetService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='io.scif.io.URLHandle', priority=0.0, enabled=true, pluginType=IStreamAccess >> [DEBUG] - class='io.scif.codec.LZWCodec', priority=0.0, enabled=true, pluginType=Codec >> [DEBUG] - class='io.scif.io.DefaultNIOService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='io.scif.img.converters.DefaultPlaneConverterService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='io.scif.img.cell.SCIFIOCellCacheCleaningProvider', priority=0.0, enabled=true, pluginType=RefProvider >> [DEBUG] - class='io.scif.codec.JPEG2000Codec', priority=0.0, enabled=true, pluginType=Codec >> [DEBUG] - class='io.scif.img.DefaultImgUtilityService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='io.scif.gui.DefaultGUIService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='io.scif.filters.DimensionSwapper', priority=0.0, enabled=true, pluginType=Filter >> [DEBUG] - class='io.scif.xml.DefaultXMLService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='io.scif.codec.HuffmanCodec', priority=0.0, enabled=true, pluginType=Codec >> [DEBUG] - class='io.scif.refs.DefaultRefManagerService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='io.scif.services.DefaultFormatService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='io.scif.codec.RPZACodec', priority=0.0, enabled=true, pluginType=Codec >> [DEBUG] - class='io.scif.codec.MJPBCodec', priority=0.0, enabled=true, pluginType=Codec >> [DEBUG] - class='io.scif.codec.PassthroughCodec', priority=0.0, enabled=true, pluginType=Codec >> [DEBUG] - class='io.scif.filters.PlaneSeparatorMetadata', priority=0.0, enabled=true, pluginType=MetadataWrapper >> [DEBUG] - class='io.scif.filters.ChannelFiller', priority=0.0, enabled=true, pluginType=Filter >> [DEBUG] - class='io.scif.codec.PackbitsCodec', priority=0.0, enabled=true, pluginType=Codec >> [DEBUG] - class='io.scif.filters.MinMaxFilter', priority=0.0, enabled=true, pluginType=Filter >> [DEBUG] - class='io.scif.io.BZip2Handle', priority=0.0, enabled=true, pluginType=IStreamAccess >> [DEBUG] - class='io.scif.services.DefaultTranslatorService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='io.scif.img.cell.RefMapCleaningProvider', priority=0.0, enabled=true, pluginType=RefProvider >> [DEBUG] - class='io.scif.codec.QTRLECodec', priority=0.0, enabled=true, pluginType=Codec >> [DEBUG] - class='io.scif.io.GZipHandle', priority=0.0, enabled=true, pluginType=IStreamAccess >> [DEBUG] - class='io.scif.codec.LosslessJPEGCodec', priority=0.0, enabled=true, pluginType=Codec >> [DEBUG] - class='io.scif.codec.MSVideoCodec', priority=0.0, enabled=true, pluginType=Codec >> [DEBUG] - class='io.scif.filters.PlaneSeparator', priority=0.0, enabled=true, pluginType=Filter >> [DEBUG] - class='io.scif.codec.Base64Codec', priority=0.0, enabled=true, pluginType=Codec >> [DEBUG] - class='io.scif.SCIFIO', priority=0.0, enabled=true, pluginType=Gateway >> [DEBUG] - class='io.scif.codec.DefaultCodecService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='io.scif.codec.JPEGCodec', priority=0.0, enabled=true, pluginType=Codec >> [DEBUG] - class='io.scif.img.ImgPlusCtxCleaningProvider', priority=0.0, enabled=true, pluginType=RefProvider >> [DEBUG] - class='io.scif.codec.LuraWaveCodec', priority=0.0, enabled=true, pluginType=Codec >> [DEBUG] - class='io.scif.img.cell.SCIFIOCellCleaningProvider', priority=0.0, enabled=true, pluginType=RefProvider >> [DEBUG] - class='io.scif.codec.MSRLECodec', priority=0.0, enabled=true, pluginType=Codec >> [DEBUG] - class='io.scif.img.cell.cache.MapDBCache', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='io.scif.DefaultMetadataService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='io.scif.img.cell.SCIFIOCellImgCleaningProvider', priority=0.0, enabled=true, pluginType=RefProvider >> [DEBUG] - class='io.scif.filters.FileStitcher', priority=0.0, enabled=true, pluginType=Filter >> [DEBUG] - class='io.scif.services.DefaultFilePatternService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='io.scif.io.ZipHandle', priority=0.0, enabled=true, pluginType=IStreamAccess >> [DEBUG] - class='io.scif.codec.NikonCodec', priority=0.0, enabled=true, pluginType=Codec >> [DEBUG] - class='io.scif.formats.tiff.DefaultTiffService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='io.scif.services.DefaultLocationService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='io.scif.codec.ZlibCodec', priority=0.0, enabled=true, pluginType=Codec >> [DEBUG] - class='io.scif.services.JAIIIOServiceImpl', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='io.scif.formats.qt.DefaultQTJavaService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Batch', priority=0.0, enabled=true, pluginType=ConsoleArgument >> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$IJPath', priority=0.0, enabled=true, pluginType=ConsoleArgument >> [DEBUG] - 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class='net.imagej.ImageJ', priority=0.0, enabled=true, pluginType=Gateway >> [DEBUG] - class='net.imagej.ops.DefaultOpService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='net.imagej.ops.threshold.LocalMean', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.DefaultOpMatchingService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='net.imagej.plugins.commands.dataset.LoadDataset', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.overlay.SelectedManagerOverlayProperties', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.misc.ApplyLookupTable', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.plugins.scripting.jruby.JRubyScriptHeader', priority=0.0, enabled=true, pluginType=ScriptHeader >> [DEBUG] - class='fiji.plugin.trackmate.action.TrackBranchAnalysis$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackLocationAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer >> [DEBUG] - class='fiji.plugin.trackmate.visualization.hyperstack.HyperStackDisplayerFactory', priority=0.0, enabled=true, pluginType=ViewFactory >> [DEBUG] - class='fiji.plugin.trackmate.features.edges.EdgeTimeLocationAnalyzer', priority=0.0, enabled=true, pluginType=EdgeAnalyzer >> [DEBUG] - class='fiji.plugin.trackmate.action.ResetRadiusAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >> [DEBUG] - class='fiji.plugin.trackmate.action.RecalculateFeatureAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >> [DEBUG] - class='fiji.plugin.trackmate.action.ISBIChallengeExporter$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >> [DEBUG] - class='fiji.plugin.trackmate.action.MergeFileAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >> [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotRadiusEstimatorFactory', priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory >> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackBranchingAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer >> [DEBUG] - class='fiji.plugin.trackmate.action.PlotNSpotsVsTimeAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >> [DEBUG] - class='fiji.plugin.trackmate.action.ExportStatsToIJAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >> [DEBUG] - class='fiji.plugin.trackmate.features.edges.EdgeTargetAnalyzer', priority=0.0, enabled=true, pluginType=EdgeAnalyzer >> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackDurationAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer >> [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotIntensityAnalyzerFactory', priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory >> [DEBUG] - class='fiji.plugin.trackmate.features.edges.EdgeVelocityAnalyzer', priority=0.0, enabled=true, pluginType=EdgeAnalyzer >> [DEBUG] - class='fiji.plugin.trackmate.detection.LogDetectorFactory', priority=0.0, enabled=true, pluginType=SpotDetectorFactory >> [DEBUG] - class='fiji.plugin.trackmate.action.ExportTracksToXML$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >> [DEBUG] - class='fiji.plugin.trackmate.action.LinkNew3DViewerAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >> [DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.SimpleLAPTrackerFactory', priority=0.0, enabled=true, pluginType=SpotTrackerFactory >> [DEBUG] - class='fiji.plugin.trackmate.action.ResetSpotTimeFeatureAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >> [DEBUG] - class='fiji.plugin.trackmate.action.RadiusToEstimatedAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >> [DEBUG] - class='fiji.plugin.trackmate.action.IcyTrackExporter$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >> [DEBUG] - class='fiji.plugin.trackmate.action.CaptureOverlayAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >> [DEBUG] - class='fiji.plugin.trackmate.tracking.sparselap.SimpleSparseLAPTrackerFactory', priority=0.0, enabled=true, pluginType=SpotTrackerFactory >> [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotMorphologyAnalyzerFactory', priority=0.0, enabled=false, pluginType=SpotAnalyzerFactory >> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackSpotQualityFeatureAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer >> [DEBUG] - class='fiji.plugin.trackmate.action.CopyOverlayAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >> [DEBUG] - class='fiji.plugin.trackmate.tracking.sparselap.SparseLAPTrackerFactory', priority=0.0, enabled=true, pluginType=SpotTrackerFactory >> [DEBUG] - class='fiji.plugin.trackmate.detection.ManualDetectorFactory', priority=0.0, enabled=true, pluginType=SpotDetectorFactory >> [DEBUG] - class='fiji.plugin.trackmate.features.manual.ManualSpotColorAnalyzerFactory', priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory >> [DEBUG] - class='fiji.plugin.trackmate.detection.DogDetectorFactory', priority=0.0, enabled=true, pluginType=SpotDetectorFactory >> [DEBUG] - class='fiji.plugin.trackmate.action.ExtractTrackStackAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >> [DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.LAPTrackerFactory', priority=0.0, enabled=true, pluginType=SpotTrackerFactory >> [DEBUG] - class='fiji.plugin.trackmate.features.manual.ManualEdgeColorAnalyzer', priority=0.0, enabled=true, pluginType=EdgeAnalyzer >> [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotContrastAnalyzerFactory', priority=0.0, enabled=false, pluginType=SpotAnalyzerFactory >> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackSpeedStatisticsAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer >> [DEBUG] - class='fiji.plugin.trackmate.detection.DownsampleLogDetectorFactory', priority=0.0, enabled=true, pluginType=SpotDetectorFactory >> [DEBUG] - class='fiji.plugin.trackmate.visualization.trackscheme.TrackSchemeFactory', priority=0.0, enabled=true, pluginType=ViewFactory >> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackIndexAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer >> [DEBUG] - class='io.scif.cli.commands.Help', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand >> [DEBUG] - class='io.scif.cli.commands.Show', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand >> [DEBUG] - class='io.scif.cli.commands.Info', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand >> [DEBUG] - class='io.scif.cli.commands.Convert', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand >> [DEBUG] - class='io.scif.ome.commands.OMEXMLToolCommand', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand >> [DEBUG] - class='io.scif.ome.translators.DefaultOMETranslator', priority=0.0, enabled=true, pluginType=ToOMETranslator >> [DEBUG] - class='io.scif.ome.services.DefaultOMEXMLService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='io.scif.ome.services.DefaultOMEMetadataService', priority=0.0, enabled=true, pluginType=Service >> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat', priority=0.0, enabled=true, pluginType=Format >> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat$OMETranslator', priority=0.0, enabled=true, pluginType=Translator >> [DEBUG] - class='io.scif.tools.commands.Show', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand >> [DEBUG] - class='io.scif.tools.commands.Help', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand >> [DEBUG] - class='io.scif.tools.commands.Info', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand >> [DEBUG] - class='io.scif.tools.commands.Convert', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand >> [DEBUG] - class='io.scif.lifesci.SDTFormat', priority=0.0, enabled=true, pluginType=Format >> [DEBUG] - class='net.imagej.options.OptionsPointTool', menu='Edit > Options > Point Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin >> [DEBUG] - class='net.imagej.plugins.commands.debug.PointSetDemo', menu='Plugins > Sandbox > PointSet Demo', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.PowerDataValues', menu='Process > Math > Power...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.app.Preferences', label='Preferences', menu='File > Preferences', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.options.OptionsProfilePlot', menu='Edit > Options > Profile Plot Options...', priority=0.0, enabled=true, pluginType=OptionsPlugin >> [DEBUG] - class='net.imagej.ops.commands.project.ProjectCommand', menu='Image > Threshold > Project', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.options.OptionsProxy', menu='Edit > Options > Proxy Settings...', priority=0.0, enabled=true, pluginType=OptionsPlugin >> [DEBUG] - class='net.imagej.app.QuitProgram', label='Quit', menu='File > Quit', iconPath='/icons/commands/door_in.png', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.RadialNeighborhoodSpecifier', label='Radial Neighborhood Specification', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.ReciprocalDataValues', menu='Process > Math > Reciprocal...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.RectangularNeighborhoodSpecifier', label='Rectangular Neighborhood Specification', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.display.RemoveOverlay', menu='Image > Overlay > Remove Overlay', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.display.RemoveOverlayReferences', menu='Image > Overlay > Remove Overlay References', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.restructure.ReorderAxis', menu='Image > Axes > Reorder Axis', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.restructure.ReorderData', menu='Image > Data > Reorder Data...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.options.OptionsReset', menu='Edit > Options > Reset', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.imglib.ResizeImage', menu='Image > Adjust > Resize...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.imglib.ResliceImage', menu='Image > Stacks > Reslice...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.io.RevertImage', menu='File > Revert', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.rotate.Rotate90DegreesLeft', menu='Image > Transform > Rotate 90 Degrees Left', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.rotate.Rotate90DegreesRight', menu='Image > Transform > Rotate 90 Degrees Right', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.imglib.RotateImageXY', menu='Image > Transform > Rotate...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.options.OptionsRoundedRectangleTool', menu='Edit > Options > Rounded Rect Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin >> [DEBUG] - class='org.scijava.plugins.commands.script.RunScript', menu='Plugins > Run Script...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.imglib.SaltAndPepper', menu='Process > Noise > Salt and Pepper', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.io.SaveImage', menu='File > Save', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.io.SaveAsImage', menu='File > Save As...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.ui.swing.script.ScriptEditor', menu='File > New > Script...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.display.SelectOverlays', menu='Edit > Selection > Select Overlays', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.display.SelectView', menu='Edit > Selection > Select View', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.display.SelectWindow', label='Select Window...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.legacy.plugin.GetPath', label='Select path', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.axispos.SetActiveAxis', menu='Image > Axes > Set Active Axis...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.axispos.SetAxisPosition', menu='Image > Axes > Set Axis Position...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomSet', label='Set Zoom...', menu='Image > Zoom > Set...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.SetDataValues', menu='Process > Math > Set...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsDemo', menu='Process > Shadows > Shadows Demo', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.correlate.SharpenDataValues', menu='Process > Sharpen', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.misc.ShowInfo', menu='Image > Show Info...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.display.ShowLUT', menu='Image > Color > Show LUT', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.display.ShowLUTAsTable', menu='Image > Color > Show LUT As Table', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.correlate.SmoothDataValues', menu='Process > Smooth', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsSouth', menu='Process > Shadows > South', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsSoutheast', menu='Process > Shadows > Southeast', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsSouthwest', menu='Process > Shadows > Southwest', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.overlay.SelectionSpecify', menu='Edit > Selection > Specify...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.display.SpectralComposite', menu='Image > Color > Spectral Composite...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.restructure.SplitChannelsContext', menu='Split Channels', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.tools.SprayCanToolConfig', label='Spray Can Tool', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.SquareRootDataValues', menu='Process > Math > Square Root...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.SquareDataValues', menu='Process > Math > Square...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.animation.StartAnimation', menu='Image > Animation > Start Animation', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.debug.StatisticsDemo', menu='Plugins > Sandbox > Statistics Demo', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.animation.StopAllAnimations', menu='Image > Animation > Stop All Animations', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.animation.StopAnimation', menu='Image > Animation > Stop Animation', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='org.scijava.plugins.commands.debug.ShowSubscribers', menu='Plugins > Debug > Subscribers', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.SubtractFromDataValues', menu='Process > Math > Subtract...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.legacy.plugin.SwitchToLegacyMode', menu='Help > Switch to Legacy Mode', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.display.interactive.SynchronizeWindows', menu='Analyze > Tools > Synchronize Windows', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='org.scijava.plugins.commands.debug.SystemInformation', menu='Plugins > Debug > System Information', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.debug.TableDemo', menu='Plugins > Sandbox > Table Demo', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='org.scijava.plugins.commands.debug.TextDisplayTest', menu='Plugins > Sandbox > TextDisplayTest', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.updater.PromptUserToUpdate', label='There are updates available', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.display.interactive.Threshold', menu='Image > Adjust > Threshold...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='org.scijava.ui.swing.mdi.WindowsTileVertical', menu='Window > Tile Vertical', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomToSelection', menu='Image > Zoom > To Selection', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.imglib.TranslateImage', menu='Image > Transform > Translate...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionTrimmedMean', menu='Process > Noise > Noise Reduction > Trimmed Mean', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.updater.CheckForUpdates', label='Up-to-date check', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.ui.swing.updater.ImageJUpdater', menu='Help > Update...', priority=0.0, enabled=true, pluginType=UpdaterUI >> [DEBUG] - class='net.imagej.plugins.commands.upload.SampleImageUploader', menu='Help > Upload Sample Image', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.zoom.Zoom100Percent', menu='Image > Zoom > View 100%', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.options.OptionsWandTool', menu='Edit > Options > Wand Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin >> [DEBUG] - class='org.scijava.ui.swing.commands.WatchEvents', menu='Plugins > Debug > Watch Events', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsWest', menu='Process > Shadows > West', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.assign.XorDataValuesWith', menu='Process > Math > XOR...', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomIn', label='Zoom In', menu='Image > Zoom > In', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomOut', label='Zoom Out', menu='Image > Zoom > Out', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='net.imagej.ui.swing.script.TextEditor$BeanshellHighlighter', label='beanshell', priority=0.0, enabled=true, pluginType=SyntaxHighlighter >> [DEBUG] - class='net.imagej.ui.swing.script.TextEditor$ECMAScriptHighlighter', label='ecmascript', priority=0.0, enabled=true, pluginType=SyntaxHighlighter >> [DEBUG] - class='net.imagej.ui.swing.script.TextEditor$IJ1MacroHighlighter', label='ij1-macro', priority=0.0, enabled=true, pluginType=SyntaxHighlighter >> [DEBUG] - class='net.imagej.ui.swing.script.TextEditor$MatlabHighlighter', label='matlab', priority=0.0, enabled=true, pluginType=SyntaxHighlighter >> [DEBUG] - class='net.imagej.plugins.commands.app.EasterEgg', label='| It's a secret to everyone |', priority=0.0, enabled=true, pluginType=Command >> [DEBUG] - class='io.scif.formats.APNGFormat', name='Animated PNG', priority=0.0, enabled=true, pluginType=Format >> [DEBUG] - class='io.scif.img.converters.ArrayDataAccessConverter', name='ArrayDataAccess', priority=0.0, enabled=true, pluginType=PlaneConverter >> [DEBUG] - class='io.scif.formats.AVIFormat', name='Audio Video Interleave', priority=0.0, enabled=true, pluginType=Format >> [DEBUG] - class='net.imagej.plugins.tools.AxisPositionHandler', name='Axis Position Shortcuts', priority=0.0, enabled=true, pluginType=Tool >> [DEBUG] - class='org.scijava.plugins.scripting.beanshell.BeanshellScriptLanguage', name='BeanShell', priority=0.0, enabled=true, pluginType=ScriptLanguage >> [DEBUG] - class='org.scijava.plugins.scripting.clojure.ClojureScriptLanguage', name='Clojure', priority=0.0, enabled=true, pluginType=ScriptLanguage >> [DEBUG] - class='net.imagej.autoscale.ConfidenceIntervalAutoscaleMethod', name='Confidence Interval', priority=0.0, enabled=true, pluginType=AutoscaleMethod >> [DEBUG] - class='net.imagej.plugins.tools.ContextMenuHandler', name='Context Menus', priority=0.0, enabled=true, pluginType=Tool >> [DEBUG] - class='io.scif.formats.DICOMFormat', name='DICOM', priority=0.0, enabled=true, pluginType=Format >> [DEBUG] - class='net.imagej.autoscale.DefaultAutoscaleMethod', name='Default', priority=0.0, enabled=true, pluginType=AutoscaleMethod >> [DEBUG] - class='net.imagej.threshold.DefaultThresholdMethod', name='Default', priority=0.0, enabled=true, pluginType=ThresholdMethod >> [DEBUG] - class='io.scif.img.converters.RandomAccessConverter', name='Default', priority=0.0, enabled=true, pluginType=PlaneConverter >> [DEBUG] - class='io.scif.formats.EPSFormat', name='Encapsulated PostScript', priority=0.0, enabled=true, pluginType=Format >> [DEBUG] - class='io.scif.formats.FITSFormat', name='Flexible Image Transport System', priority=0.0, enabled=true, pluginType=Format >> [DEBUG] - class='io.scif.formats.GIFFormat', name='Graphics Interchange Format', priority=0.0, enabled=true, pluginType=Format >> [DEBUG] - class='org.scijava.plugins.scripting.groovy.GroovyScriptLanguage', name='Groovy', priority=0.0, enabled=true, pluginType=ScriptLanguage >> [DEBUG] - class='net.imagej.threshold.HuangThresholdMethod', name='Huang', priority=0.0, enabled=true, pluginType=ThresholdMethod >> [DEBUG] - class='net.imagej.legacy.plugin.IJ1MacroLanguage', name='IJ1 Macro', priority=0.0, enabled=true, pluginType=ScriptLanguage >> [DEBUG] - class='io.scif.formats.ICSFormat', name='Image Cytometry Standard', priority=0.0, enabled=true, pluginType=Format >> [DEBUG] - class='net.imagej.legacy.LegacyImageJApp', name='ImageJ1', priority=0.0, enabled=true, pluginType=App >> [DEBUG] - class='net.imagej.threshold.IntermodesThresholdMethod', name='Intermodes', priority=0.0, enabled=true, pluginType=ThresholdMethod >> [DEBUG] - class='net.imagej.threshold.IsoDataThresholdMethod', name='IsoData', priority=0.0, enabled=true, pluginType=ThresholdMethod >> [DEBUG] - class='io.scif.formats.JPEGFormat', name='JPEG', priority=0.0, enabled=true, pluginType=Format >> [DEBUG] - class='io.scif.formats.JPEG2000Format', name='JPEG-2000', priority=0.0, enabled=true, pluginType=Format >> [DEBUG] - class='org.scijava.plugins.scripting.java.JavaScriptLanguage', name='Java', priority=0.0, enabled=true, pluginType=ScriptLanguage >> [DEBUG] - class='io.scif.formats.JavaFormat', name='Java source code', priority=0.0, enabled=true, pluginType=Format >> [DEBUG] - class='org.scijava.plugins.scripting.javascript.JavaScriptScriptLanguage', name='JavaScript', priority=0.0, enabled=true, pluginType=ScriptLanguage >> [DEBUG] - class='net.imagej.threshold.LiThresholdMethod', name='Li', priority=0.0, enabled=true, pluginType=ThresholdMethod >> [DEBUG] - class='org.scijava.plugins.platforms.macosx.MacOSXPlatform', name='Mac OS X', priority=0.0, enabled=true, pluginType=Platform >> [DEBUG] - class='net.imagej.threshold.MaxEntropyThresholdMethod', name='MaxEntropy', priority=0.0, enabled=true, pluginType=ThresholdMethod >> [DEBUG] - class='net.imagej.threshold.MaxLikelihoodThresholdMethod', name='MaxLikelihood', priority=0.0, enabled=true, pluginType=ThresholdMethod >> [DEBUG] - class='net.imagej.threshold.MeanThresholdMethod', name='Mean', priority=0.0, enabled=true, pluginType=ThresholdMethod >> [DEBUG] - class='io.scif.formats.MicromanagerFormat', name='Micro-Manager', priority=0.0, enabled=true, pluginType=Format >> [DEBUG] - class='net.imagej.threshold.MinErrorThresholdMethod', name='MinError(I)', priority=0.0, enabled=true, pluginType=ThresholdMethod >> [DEBUG] - class='net.imagej.threshold.MinimumThresholdMethod', name='Minimum', priority=0.0, enabled=true, pluginType=ThresholdMethod >> [DEBUG] - class='net.imagej.threshold.MomentsThresholdMethod', name='Moments', priority=0.0, enabled=true, pluginType=ThresholdMethod >> [DEBUG] - class='io.scif.formats.MNGFormat', name='Multiple Network Graphics', priority=0.0, enabled=true, pluginType=Format >> [DEBUG] - class='io.scif.formats.NRRDFormat', name='NRRD', priority=0.0, enabled=true, pluginType=Format >> [DEBUG] - class='io.scif.formats.OBFFormat', name='OBF', priority=0.0, enabled=true, pluginType=Format >> [DEBUG] - class='net.imagej.threshold.OtsuThresholdMethod', name='Otsu', priority=0.0, enabled=true, pluginType=ThresholdMethod >> [DEBUG] - class='io.scif.formats.PCXFormat', name='PCX', priority=0.0, enabled=true, pluginType=Format >> [DEBUG] - class='io.scif.formats.qt.PICTFormat', name='PICT', priority=0.0, enabled=true, pluginType=Format >> [DEBUG] - class='net.imagej.plugins.tools.PanActivator', name='Pan Activator', priority=0.0, enabled=true, pluginType=Tool >> [DEBUG] - class='net.imagej.threshold.PercentileThresholdMethod', name='Percentile', priority=0.0, enabled=true, pluginType=ThresholdMethod >> [DEBUG] - class='io.scif.img.converters.PlanarAccessConverter', name='PlanarAccess', priority=0.0, enabled=true, pluginType=PlaneConverter >> [DEBUG] - class='io.scif.formats.PGMFormat', name='Portable Gray Map', priority=0.0, enabled=true, pluginType=Format >> [DEBUG] - class='net.imagej.plugins.tools.PixelProbe', name='Probe', priority=0.0, enabled=true, pluginType=Tool >> [DEBUG] - class='org.scijava.plugins.scripting.jython.JythonScriptLanguage', name='Python', priority=0.0, enabled=true, pluginType=ScriptLanguage >> [DEBUG] - class='io.scif.formats.qt.NativeQTFormat', name='QuickTime', priority=0.0, enabled=true, pluginType=Format >> [DEBUG] - class='net.imagej.threshold.RenyiEntropyThresholdMethod', name='RenyiEntropy', priority=0.0, enabled=true, pluginType=ThresholdMethod >> [DEBUG] - class='org.scijava.plugins.scripting.jruby.JRubyScriptLanguage', name='Ruby', priority=0.0, enabled=true, pluginType=ScriptLanguage >> [DEBUG] - class='io.scif.app.SCIFIOApp', name='SCIFIO', priority=0.0, enabled=true, pluginType=App >> [DEBUG] - class='net.imagej.threshold.ShanbhagThresholdMethod', name='Shanbhag', priority=0.0, enabled=true, pluginType=ThresholdMethod >> [DEBUG] - class='io.scif.formats.FakeFormat', name='Simulated data', priority=0.0, enabled=true, pluginType=Format >> [DEBUG] - class='io.scif.formats.TextFormat', name='Text', priority=0.0, enabled=true, pluginType=Format >> [DEBUG] - class='net.imagej.threshold.TriangleThresholdMethod', name='Triangle', priority=0.0, enabled=true, pluginType=ThresholdMethod >> [DEBUG] - class='net.imagej.plugins.tools.FocusHandler', name='Window Focus', priority=0.0, enabled=true, pluginType=Tool >> [DEBUG] - class='org.scijava.plugins.platforms.windows.WindowsPlatform', name='Windows', priority=0.0, enabled=true, pluginType=Platform >> [DEBUG] - class='io.scif.formats.BMPFormat', name='Windows Bitmap', priority=0.0, enabled=true, pluginType=Format >> [DEBUG] - class='net.imagej.threshold.YenThresholdMethod', name='Yen', priority=0.0, enabled=true, pluginType=ThresholdMethod >> [DEBUG] - class='io.scif.formats.ZipFormat', name='Zip', priority=0.0, enabled=true, pluginType=Format >> [DEBUG] - class='net.imagej.plugins.tools.ZoomHandler', name='Zoom Shortcuts', priority=0.0, enabled=true, pluginType=Tool >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealAbs', name='abs', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToImageInPlace', name='add', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddRandomAccessibleIntervalToIterableInterval', name='add', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToPlanarDoubleImage', name='add', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealAddConstant', name='addconstant', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealAddNoise', name='addnoise', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealAndConstant', name='andconstant', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccos', name='arccos', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccosh', name='arccosh', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccot', name='arccot', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccoth', name='arccoth', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccsc', name='arccsc', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccsch', name='arccsch', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArcsec', name='arcsec', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArcsech', name='arcsech', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArcsin', name='arcsin', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArcsinh', name='arcsinh', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArctan', name='arctan', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArctanh', name='arctanh', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.ascii.DefaultASCII', name='ascii', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCeil', name='ceil', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.chunker.DefaultChunker', name='chunker', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealConstant', name='constant', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.convert.ConvertPixClip', name='convert', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.convert.ConvertII', name='convert', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.convert.ConvertPixNormalizeScale', name='convert', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.convert.ConvertPixScale', name='convert', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.convert.ConvertPixCopy', name='convert', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.convolve.ConvolveNaive', name='convolve', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.convolve.ConvolveFourier', name='convolve', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCopy', name='copy', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCos', name='cos', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCosh', name='cosh', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCot', name='cot', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCoth', name='coth', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.create.CreateArrayImg', name='create', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCsc', name='csc', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCsch', name='csch', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCubeRoot', name='cuberoot', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealDivideConstant', name='divideconstant', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.equation.DefaultEquation', name='equation', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealExp', name='exp', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealExpMinusOne', name='expminusone', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealFloor', name='floor', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealGammaConstant', name='gammaconstant', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.gauss.GaussRAI2RAI', name='gauss', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealGaussianRandom', name='gaussianrandom', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.identity.DefaultIdentity', name='identity', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealInvert', name='invert', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.join.DefaultJoinInplaceAndInplace', name='join', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.join.DefaultJoinInplaceAndFunction', name='join', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.join.DefaultJoinFunctionAndFunction', name='join', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.join.DefaultJoinInplaceFunctions', name='join', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.join.DefaultJoinFunctionAndInplace', name='join', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.join.DefaultJoinFunctions', name='join', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealLog', name='log', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealLog10', name='log10', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealLog2', name='log2', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealLogOnePlusX', name='logoneplusx', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.lookup.DefaultLookup', name='lookup', aliases='op', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.loop.DefaultLoopInplace', name='loop', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.loop.DefaultLoopFunction', name='loop', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.threshold.Manual', name='manualthreshold', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.map.MapRA2View', name='map', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.map.MapRAI2View', name='map', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.map.MapII2View', name='map', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealMaxConstant', name='maxconstant', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealMinConstant', name='minconstant', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.misc.MinMaxRealType', name='minmax', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.statistics.moments.Moment2AboutMean', name='moment1aboutmean', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.statistics.moments.Moment1AboutMean', name='moment1aboutmean', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealMultiplyConstant', name='multiplyconstant', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealNearestInt', name='nearestint', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealNegate', name='negate', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.normalize.NormalizeRealType', name='normalize', aliases='norm', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.normalize.NormalizeII', name='normalize', aliases='norm', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealOrConstant', name='orconstant', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.threshold.Otsu', name='otsu', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealPowerConstant', name='powerconstant', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealReciprocal', name='reciprocal', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealRound', name='round', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.scale.ScaleImg', name='scale', aliases='norm', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSec', name='sec', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSech', name='sech', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSignum', name='signum', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSin', name='sin', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSinc', name='sinc', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSincPi', name='sincpi', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSinh', name='sinh', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSqr', name='sqr', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSqrt', name='sqrt', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealStep', name='step', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSubtractConstant', name='subtractconstant', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='org.scijava.ui.swing.sdi.SwingSDIUI', name='swing', priority=0.0, enabled=true, pluginType=UserInterface >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealTan', name='tan', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealTanh', name='tanh', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.threshold.PixThreshold', name='threshold', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.threshold.GlobalThreshold', name='threshold', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.threshold.LocalThreshold', name='threshold', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealUlp', name='ulp', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealUniformRandom', name='uniformrandom', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealXorConstant', name='xorconstant', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealZero', name='zero', priority=0.0, enabled=true, pluginType=Op >> [DEBUG] - class='fiji.plugin.trackmate.tracking.ManualTrackerFactory', priority=-1.0, enabled=true, pluginType=SpotTrackerFactory >> [DEBUG] - class='net.imagej.ops.map.ParallelMap', name='map', priority=-95.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.map.ParallelMapI2I', name='map', priority=-97.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.map.ParallelMapI2R', name='map', priority=-98.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.crop.CropImgPlus', name='crop', aliases='slice', priority=-99.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.crop.CropLabeling', name='crop', aliases='slice', priority=-99.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.map.MapII2II', name='map', priority=-99.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.project.parallel.DefaultProjectP', name='project', priority=-99.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.statistics.StdDevRealTypeDirect', name='stddev', priority=-99.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.statistics.VarianceRealTypeDirect', name='variance', priority=-99.0, enabled=true, pluginType=Op >> [DEBUG] - class='org.scijava.ui.dnd.FileDragAndDropHandler', priority=-100.0, enabled=true, pluginType=DragAndDropHandler >> [DEBUG] - class='org.scijava.display.DefaultTextDisplay', priority=-100.0, enabled=true, pluginType=Display >> [DEBUG] - class='org.scijava.log.StderrLogService', priority=-100.0, enabled=true, pluginType=Service >> [DEBUG] - class='org.scijava.platform.DefaultAppEventService', priority=-100.0, enabled=true, pluginType=Service >> [DEBUG] - class='net.imagej.display.DummyScreenCaptureService', priority=-100.0, enabled=true, pluginType=Service >> [DEBUG] - class='net.imagej.render.DummyRenderingService', priority=-100.0, enabled=true, pluginType=Service >> [DEBUG] - class='net.imagej.io.DatasetIOPlugin', priority=-100.0, enabled=true, pluginType=IOPlugin >> [DEBUG] - class='io.scif.formats.APNGFormat$APNGTranslator', priority=-100.0, enabled=true, pluginType=Translator >> [DEBUG] - class='io.scif.formats.qt.NativeQTFormat$NativeQTTranslator', priority=-100.0, enabled=true, pluginType=Translator >> [DEBUG] - class='io.scif.formats.FakeFormat$FakeTranslator', priority=-100.0, enabled=true, pluginType=Translator >> [DEBUG] - class='io.scif.formats.MicromanagerFormat$MicromanagerTranslator', priority=-100.0, enabled=true, pluginType=Translator >> [DEBUG] - class='io.scif.services.DefaultInitializeService', priority=-100.0, enabled=true, pluginType=Service >> [DEBUG] - class='io.scif.formats.AVIFormat$Translator', priority=-100.0, enabled=true, pluginType=Translator >> [DEBUG] - class='io.scif.formats.ICSFormat$ICSTranslator', priority=-100.0, enabled=true, pluginType=Translator >> [DEBUG] - class='io.scif.formats.EPSFormat$EPSTranslator', priority=-100.0, enabled=true, pluginType=Translator >> [DEBUG] - class='io.scif.formats.ImageIOFormat$ImageIOTranslator', priority=-100.0, enabled=true, pluginType=Translator >> [DEBUG] - class='io.scif.formats.qt.LegacyQTFormat$LegacyQTTranslator', priority=-100.0, enabled=true, pluginType=Translator >> [DEBUG] - class='net.imagej.legacy.plugin.DefaultLegacyOpener', priority=-100.0, enabled=true, pluginType=LegacyOpener >> [DEBUG] - class='net.imagej.legacy.plugin.DefaultLegacyEditor', priority=-100.0, enabled=true, pluginType=LegacyEditor >> [DEBUG] - class='org.scijava.plugins.scripting.java.MainJavaRunner', priority=-100.0, enabled=true, pluginType=JavaRunner >> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat$OMEXMLTranslator', priority=-100.0, enabled=true, pluginType=Translator >> [DEBUG] - class='io.scif.formats.qt.LegacyQTFormat', name='QuickTime', priority=-100.0, enabled=true, pluginType=Format >> [DEBUG] - class='org.scijava.app.SciJavaApp', name='SciJava', priority=-100.0, enabled=true, pluginType=App >> [DEBUG] - class='io.scif.formats.JPEGTileFormat', name='Tile JPEG', priority=-100.0, enabled=true, pluginType=Format >> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToNumericType', name='add', priority=-100.0, enabled=true, pluginType=Op >> [DEBUG] - class='org.scijava.ui.awt.AWTUI', name='awt', priority=-100.0, enabled=true, pluginType=UserInterface >> [DEBUG] - class='net.imagej.ops.crop.CropRAI', name='crop', aliases='slice', priority=-100.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.map.MapII2RAI', name='map', priority=-100.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.map.MapRAI2III', name='map', priority=-100.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.map.MapI', name='map', priority=-100.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.neighborhood.MapNeighborhood', name='map', priority=-100.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.statistics.MaxRealType', name='max', priority=-100.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.statistics.MeanRealType', name='mean', priority=-100.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.statistics.MedianRealType', name='median', priority=-100.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.statistics.MinRealType', name='min', priority=-100.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.project.ProjectRAI2II', name='project', priority=-100.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.misc.SizeIterableInterval', name='size', priority=-100.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.statistics.StdDevRealType', name='stddev', priority=-100.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.statistics.SumRealType', name='sum', priority=-100.0, enabled=true, pluginType=Op >> [DEBUG] - class='org.scijava.ui.swing.mdi.SwingMdiUI', name='swing-mdi', priority=-100.0, enabled=true, pluginType=UserInterface >> [DEBUG] - class='net.imagej.ops.statistics.VarianceRealType', name='variance', priority=-100.0, enabled=true, pluginType=Op >> [DEBUG] - class='org.scijava.text.io.TextIOPlugin', priority=-101.0, enabled=true, pluginType=IOPlugin >> [DEBUG] - class='net.imagej.ops.map.MapI2I', name='map', priority=-101.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.plugins.tools.WandTool', name='Wand', description='Wand (tracing) tool', iconPath='/icons/tools/wand.png', priority=-110.0, enabled=false, pluginType=Tool >> [DEBUG] - class='net.imagej.ui.swing.tools.SwingTextTool', name='Text', description='Text tool', iconPath='/icons/tools/text.png', priority=-115.0, enabled=false, pluginType=Tool >> [DEBUG] - class='net.imagej.plugins.tools.ZoomTool', name='Zoom', description='Magnifying glass (or use "+" and "-" keys)', iconPath='/icons/tools/zoom.png', priority=-200.0, enabled=true, pluginType=Tool >> [DEBUG] - class='net.imagej.plugins.tools.PanTool', name='Pan', description='Scrolling tool (or press space bar and drag)', iconPath='/icons/tools/pan.png', priority=-201.0, enabled=true, pluginType=Tool >> [DEBUG] - class='net.imagej.plugins.tools.PaintBrushTool', name='Paintbrush', description='Paintbrush Tool', iconPath='/icons/tools/paintbrush.png', priority=-300.0, enabled=true, pluginType=Tool >> [DEBUG] - class='net.imagej.plugins.tools.PencilTool', name='Pencil', description='Pencil Tool', iconPath='/icons/tools/pencil.png', priority=-301.0, enabled=true, pluginType=Tool >> [DEBUG] - class='net.imagej.plugins.tools.SprayCanTool', name='SprayCan', label='Spray Can', description='Spray Can Tool', iconPath='/icons/tools/spray-can.png', priority=-303.0, enabled=true, pluginType=Tool >> [DEBUG] - class='net.imagej.plugins.tools.FloodFillTool', name='FloodFill', label='Flood Fill', description='Flood Fill Tool', iconPath='/icons/tools/flood-fill.png', priority=-304.0, enabled=true, pluginType=Tool >> [DEBUG] - class='net.imagej.plugins.tools.ArrowTool', name='Arrow', description='Arrow Tool', iconPath='/icons/tools/arrow.png', priority=-305.0, enabled=false, pluginType=Tool >> [DEBUG] - class='net.imagej.plugins.tools.FgColorTool', name='Foreground', iconPath='/icons/tools/blank.png', priority=-500.0, enabled=true, pluginType=Tool >> [DEBUG] - class='net.imagej.plugins.tools.BgColorTool', name='Background', iconPath='/icons/tools/blankBlack.png', priority=-501.0, enabled=true, pluginType=Tool >> [DEBUG] - class='io.scif.ome.formats.OMETIFFFormat', priority=-9998.0, enabled=true, pluginType=Format >> [DEBUG] - class='io.scif.ome.formats.OMETIFFFormat$OMETIFFTranslator', priority=-9998.0, enabled=true, pluginType=Translator >> [DEBUG] - class='org.scijava.module.process.LoadInputsPreprocessor', priority=-9999.0, enabled=true, pluginType=PreprocessorPlugin >> [DEBUG] - class='io.scif.formats.TIFFFormat$TIFFTranslator', priority=-9999.0, enabled=true, pluginType=Translator >> [DEBUG] - class='io.scif.formats.TIFFFormat', name='Tagged Image File Format', priority=-9999.0, enabled=true, pluginType=Format >> [DEBUG] - class='org.scijava.ui.FilePreprocessor', priority=-9999.5, enabled=true, pluginType=PreprocessorPlugin >> [DEBUG] - class='org.scijava.ui.awt.widget.AWTInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin >> [DEBUG] - class='org.scijava.plugins.text.plain.PlainTextFormat', priority=-10000.0, enabled=true, pluginType=TextFormat >> [DEBUG] - class='org.scijava.display.DisplayPostprocessor', priority=-10000.0, enabled=true, pluginType=PostprocessorPlugin >> [DEBUG] - class='io.scif.DefaultTranslator', priority=-10000.0, enabled=true, pluginType=Translator >> [DEBUG] - class='net.imagej.legacy.ui.LegacyInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin >> [DEBUG] - class='org.scijava.ui.swing.widget.SwingInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin >> [DEBUG] - class='org.scijava.ui.swing.widget.SwingMdiInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin >> [DEBUG] - class='net.imagej.ui.swing.overlay.DefaultJHotDrawAdapter', priority=-10000.0, enabled=true, pluginType=JHotDrawAdapter >> [DEBUG] - class='org.scijava.platform.DefaultPlatform', name='Default', priority=-10000.0, enabled=true, pluginType=Platform >> [DEBUG] - class='net.imagej.plugins.tools.AcceleratorHandler', name='Keyboard Shortcuts', priority=-10000.0, enabled=true, pluginType=Tool >> [DEBUG] - class='io.scif.formats.MinimalTIFFFormat', name='Minimal TIFF', priority=-10000.0, enabled=true, pluginType=Format >> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToImageFunctional', name='add', priority=-10000.0, enabled=true, pluginType=Op >> [DEBUG] - class='net.imagej.ops.chunker.InterleavedChunker', name='chunker', priority=-10000.0, enabled=true, pluginType=Op >> [DEBUG] - class='org.scijava.module.process.CheckInputsPreprocessor', priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin >> [DEBUG] - class='org.scijava.module.process.SaveInputsPreprocessor', priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin >> [DEBUG] - class='io.scif.formats.TIFFJAIFormat', name='Tagged Image File Format', priority=-10001.0, enabled=true, pluginType=Format >> [DEBUG] - class='net.imagej.ops.misc.SizeIterable', name='size', priority=-Infinity, enabled=true, pluginType=Op >> [DEBUG] Created service 'org.scijava.plugin.DefaultPluginService' in 51 ms >> [DEBUG] Creating service: org.scijava.object.DefaultObjectService >> log4j:WARN No appenders could be found for logger (org.bushe.swing.event.EventService). >> log4j:WARN Please initialize the log4j system properly. >> log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info. >> [DEBUG] Created service 'org.scijava.object.DefaultObjectService' in 72 ms >> [DEBUG] Creating service: org.scijava.module.DefaultModuleService >> [DEBUG] Creating service: org.scijava.prefs.DefaultPrefService >> [DEBUG] Created service 'org.scijava.prefs.DefaultPrefService' in 4 ms >> [DEBUG] Creating service: org.scijava.convert.DefaultConvertService >> [DEBUG] Created service 'org.scijava.convert.DefaultConvertService' in 4 ms >> [DEBUG] Created service 'org.scijava.module.DefaultModuleService' in 14 ms >> [DEBUG] Creating service: org.scijava.command.DefaultCommandService >> [DEBUG] Created service 'org.scijava.command.DefaultCommandService' in 36 ms >> [DEBUG] Created service 'org.scijava.script.DefaultScriptService' in 184 ms >> [DEBUG] Creating service: net.imagej.lut.DefaultLUTService >> [DEBUG] Creating service: net.imagej.DefaultDatasetService >> [DEBUG] Creating service: io.scif.services.DefaultFormatService >> [DEBUG] Created service 'io.scif.services.DefaultFormatService' in 3 ms >> [DEBUG] Creating service: net.imagej.types.DefaultDataTypeService >> [INFO] Found 11 DataType plugins. >> [DEBUG] Created service 'net.imagej.types.DefaultDataTypeService' in 40 ms >> [DEBUG] Created service 'net.imagej.DefaultDatasetService' in 61 ms >> [DEBUG] Creating service: org.scijava.display.DefaultDisplayService >> [DEBUG] Created service 'org.scijava.display.DefaultDisplayService' in 5 ms >> [DEBUG] Creating service: net.imagej.display.DefaultImageDisplayService >> [DEBUG] Created service 'net.imagej.display.DefaultImageDisplayService' in 3 ms >> [DEBUG] Created service 'net.imagej.lut.DefaultLUTService' in 74 ms >> [DEBUG] Creating service: net.imagej.legacy.DefaultLegacyService >> [DEBUG] Creating service: net.imagej.display.DefaultOverlayService >> [DEBUG] Creating service: org.scijava.options.DefaultOptionsService >> [DEBUG] Created service 'org.scijava.options.DefaultOptionsService' in 2 ms >> [DEBUG] Creating service: net.imagej.ui.awt.AWTRenderingService >> [DEBUG] Created service 'net.imagej.ui.awt.AWTRenderingService' in 1 ms >> [DEBUG] Created service 'net.imagej.display.DefaultOverlayService' in 10 ms >> [DEBUG] Creating service: net.imagej.threshold.DefaultThresholdService >> [DEBUG] Created service 'net.imagej.threshold.DefaultThresholdService' in 4 ms >> [DEBUG] Creating service: org.scijava.menu.DefaultMenuService >> [DEBUG] Created service 'org.scijava.menu.DefaultMenuService' in 3 ms >> [DEBUG] Creating service: org.scijava.app.DefaultStatusService >> [DEBUG] Creating service: org.scijava.app.DefaultAppService >> [DEBUG] Created service 'org.scijava.app.DefaultAppService' in 4 ms >> [DEBUG] Created service 'org.scijava.app.DefaultStatusService' in 5 ms >> [INFO] Found 8 ScriptLanguage plugins. >> [INFO] Found 0 scripts >> [INFO] Overriding Upload Sample Image; identifier: command:net.imagej.plugins.commands.upload.SampleImageUploader; jar: file:/opt/Fiji.app/jars/imagej-plugins-commands-0.2.6.jar >> [INFO] Overriding Test FlowCam; identifier: script:/opt/Fiji.app/plugins/FlowCam/Test_FlowCam.ijm; jar: file:/opt/Fiji.app/jars/scijava-common-2.33.0.jar >> [DEBUG] Created service 'net.imagej.legacy.DefaultLegacyService' in 685 ms >> [DEBUG] Creating service: fiji.DefaultFijiService >> [DEBUG] Created service 'fiji.DefaultFijiService' in 1 ms >> [DEBUG] Creating service: net.imglib2.meta.units.DefaultUnitService >> [DEBUG] Created service 'net.imglib2.meta.units.DefaultUnitService' in 44 ms >> [DEBUG] Creating service: net.imagej.ui.awt.AWTScreenCaptureService >> [DEBUG] Created service 'net.imagej.ui.awt.AWTScreenCaptureService' in 2 ms >> [DEBUG] Creating service: org.scijava.input.DefaultInputService >> [DEBUG] Created service 'org.scijava.input.DefaultInputService' in 6 ms >> [DEBUG] Creating service: org.scijava.ui.DefaultUIService >> [DEBUG] Creating service: org.scijava.platform.DefaultPlatformService >> [DEBUG] Creating service: org.scijava.platform.DefaultAppEventService >> [DEBUG] Created service 'org.scijava.platform.DefaultAppEventService' in 2 ms >> [INFO] Found 1 Platform plugins. >> [DEBUG] Configuring platform: org.scijava.platform.DefaultPlatform >> [DEBUG] Created service 'org.scijava.platform.DefaultPlatformService' in 11 ms >> [DEBUG] Creating service: org.scijava.tool.DefaultToolService >> [DEBUG] Created service 'org.scijava.tool.DefaultToolService' in 5 ms >> [DEBUG] Created service 'org.scijava.ui.DefaultUIService' in 23 ms >> [DEBUG] Creating service: org.scijava.ui.dnd.DefaultDragAndDropService >> [DEBUG] Created service 'org.scijava.ui.dnd.DefaultDragAndDropService' in 5 ms >> [DEBUG] Creating service: org.scijava.text.DefaultTextService >> [DEBUG] Created service 'org.scijava.text.DefaultTextService' in 3 ms >> [DEBUG] Creating service: org.scijava.io.DefaultRecentFileService >> [DEBUG] Created service 'org.scijava.io.DefaultRecentFileService' in 61 ms >> [DEBUG] Creating service: org.scijava.io.DefaultIOService >> [DEBUG] Created service 'org.scijava.io.DefaultIOService' in 4 ms >> [DEBUG] Creating service: org.scijava.widget.DefaultWidgetService >> [INFO] Found 22 InputWidget plugins. >> [DEBUG] Created service 'org.scijava.widget.DefaultWidgetService' in 6 ms >> [DEBUG] Creating service: org.scijava.welcome.DefaultWelcomeService >> [DEBUG] Created service 'org.scijava.welcome.DefaultWelcomeService' in 2 ms >> [DEBUG] Creating service: org.scijava.script.DefaultScriptHeaderService >> [DEBUG] Created service 'org.scijava.script.DefaultScriptHeaderService' in 2 ms >> [DEBUG] Creating service: org.scijava.event.DefaultEventHistory >> [DEBUG] Created service 'org.scijava.event.DefaultEventHistory' in 2 ms >> [DEBUG] Creating service: org.scijava.console.DefaultConsoleService >> [DEBUG] Created service 'org.scijava.console.DefaultConsoleService' in 2 ms >> [DEBUG] Creating service: net.imagej.operator.DefaultCalculatorService >> [DEBUG] Created service 'net.imagej.operator.DefaultCalculatorService' in 2 ms >> [DEBUG] Creating service: net.imagej.autoscale.DefaultAutoscaleService >> [DEBUG] Created service 'net.imagej.autoscale.DefaultAutoscaleService' in 3 ms >> [DEBUG] Creating service: net.imagej.sampler.DefaultSamplerService >> [DEBUG] Created service 'net.imagej.sampler.DefaultSamplerService' in 3 ms >> [DEBUG] Creating service: net.imagej.display.DefaultZoomService >> [DEBUG] Created service 'net.imagej.display.DefaultZoomService' in 2 ms >> [DEBUG] Creating service: net.imagej.display.DefaultWindowService >> [DEBUG] Created service 'net.imagej.display.DefaultWindowService' in 2 ms >> [DEBUG] Creating service: net.imagej.DefaultImgPlusService >> [DEBUG] Created service 'net.imagej.DefaultImgPlusService' in 1 ms >> [DEBUG] Creating service: net.imagej.ui.DefaultImageJUIService >> [DEBUG] Created service 'net.imagej.ui.DefaultImageJUIService' in 1 ms >> [DEBUG] Creating service: net.imagej.measure.DefaultStatisticsService >> [DEBUG] Created service 'net.imagej.measure.DefaultStatisticsService' in 3 ms >> [DEBUG] Creating service: net.imagej.measure.DefaultMeasurementService >> [DEBUG] Created service 'net.imagej.measure.DefaultMeasurementService' in 1 ms >> [DEBUG] Creating service: net.imagej.animation.DefaultAnimationService >> [DEBUG] Created service 'net.imagej.animation.DefaultAnimationService' in 4 ms >> [DEBUG] Creating service: io.scif.io.DefaultNIOService >> [DEBUG] Created service 'io.scif.io.DefaultNIOService' in 2 ms >> [DEBUG] Creating service: io.scif.img.converters.DefaultPlaneConverterService >> [DEBUG] Created service 'io.scif.img.converters.DefaultPlaneConverterService' in 6 ms >> [DEBUG] Creating service: io.scif.img.DefaultImgUtilityService >> [DEBUG] Created service 'io.scif.img.DefaultImgUtilityService' in 5 ms >> [DEBUG] Creating service: io.scif.gui.DefaultGUIService >> [DEBUG] Created service 'io.scif.gui.DefaultGUIService' in 3 ms >> [DEBUG] Creating service: io.scif.xml.DefaultXMLService >> [DEBUG] Created service 'io.scif.xml.DefaultXMLService' in 22 ms >> [DEBUG] Creating service: io.scif.refs.DefaultRefManagerService >> [DEBUG] Created service 'io.scif.refs.DefaultRefManagerService' in 1 ms >> [DEBUG] Creating service: io.scif.services.DefaultTranslatorService >> [DEBUG] Created service 'io.scif.services.DefaultTranslatorService' in 2 ms >> [DEBUG] Creating service: io.scif.codec.DefaultCodecService >> [DEBUG] Created service 'io.scif.codec.DefaultCodecService' in 1 ms >> [DEBUG] Creating service: io.scif.img.cell.cache.MapDBCache >> [DEBUG] Created service 'io.scif.img.cell.cache.MapDBCache' in 8 ms >> [DEBUG] Creating service: io.scif.DefaultMetadataService >> [DEBUG] Created service 'io.scif.DefaultMetadataService' in 0 ms >> [DEBUG] Creating service: io.scif.services.DefaultFilePatternService >> [DEBUG] Created service 'io.scif.services.DefaultFilePatternService' in 2 ms >> [DEBUG] Creating service: io.scif.formats.tiff.DefaultTiffService >> [DEBUG] Created service 'io.scif.formats.tiff.DefaultTiffService' in 3 ms >> [DEBUG] Creating service: io.scif.services.DefaultLocationService >> [DEBUG] Created service 'io.scif.services.DefaultLocationService' in 1 ms >> [DEBUG] Creating service: io.scif.services.JAIIIOServiceImpl >> [DEBUG] Created service 'io.scif.services.JAIIIOServiceImpl' in 24 ms >> [DEBUG] Creating service: io.scif.formats.qt.DefaultQTJavaService >> [DEBUG] Created service 'io.scif.formats.qt.DefaultQTJavaService' in 5 ms >> [DEBUG] Creating service: org.scijava.ui.swing.SwingIconService >> [DEBUG] Created service 'org.scijava.ui.swing.SwingIconService' in 3 ms >> [DEBUG] Creating service: org.scijava.plugins.scripting.java.DefaultJavaService >> [DEBUG] Created service 'org.scijava.plugins.scripting.java.DefaultJavaService' in 2 ms >> [DEBUG] Creating service: net.imagej.ui.swing.overlay.JHotDrawService >> [DEBUG] Created service 'net.imagej.ui.swing.overlay.JHotDrawService' in 3 ms >> [DEBUG] Creating service: net.imagej.updater.DefaultUpdateService >> [DEBUG] Created service 'net.imagej.updater.DefaultUpdateService' in 7 ms >> [DEBUG] Creating service: net.imagej.updater.DefaultUploaderService >> [DEBUG] Created service 'net.imagej.updater.DefaultUploaderService' in 1 ms >> [DEBUG] Creating service: net.imagej.ops.DefaultOpService >> [DEBUG] Creating service: net.imagej.ops.DefaultOpMatchingService >> [DEBUG] Created service 'net.imagej.ops.DefaultOpMatchingService' in 2 ms >> [DEBUG] Created service 'net.imagej.ops.DefaultOpService' in 5 ms >> [DEBUG] Creating service: net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor >> [DEBUG] Created service 'net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor' in 1 ms >> [DEBUG] Creating service: io.scif.ome.services.DefaultOMEXMLService >> [DEBUG] Created service 'io.scif.ome.services.DefaultOMEXMLService' in 30 ms >> [DEBUG] Creating service: io.scif.ome.services.DefaultOMEMetadataService >> [DEBUG] Created service 'io.scif.ome.services.DefaultOMEMetadataService' in 11 ms >> [DEBUG] Creating service: net.imagej.display.DummyScreenCaptureService >> [DEBUG] Created service 'net.imagej.display.DummyScreenCaptureService' in 0 ms >> [DEBUG] Creating service: net.imagej.render.DummyRenderingService >> [DEBUG] Created service 'net.imagej.render.DummyRenderingService' in 1 ms >> [DEBUG] Creating service: io.scif.services.DefaultInitializeService >> [DEBUG] Created service 'io.scif.services.DefaultInitializeService' in 3 ms >> [DEBUG] Received command line arguments: >> [DEBUG] publish( >> context = org.scijava.Context@7c92eb86 >> consumed = false,null,null), called from non-EDT Thread:null >> [DEBUG] -port7 >> [DEBUG] -macro >> [DEBUG] /home/btupper/hello.ijm >> [DEBUG] -batch >> [INFO] Found 11 ConsoleArgument plugins. >> [ERROR] Skipping unsupported option -port7 >> [DEBUG] publish( >> context = org.scijava.Context@7c92eb86 >> consumed = false,null,null), called from non-EDT Thread:null >> [INFO] Discovered user interface: net.imagej.legacy.ui.LegacyUI >> [INFO] Discovered user interface: org.scijava.ui.swing.sdi.SwingSDIUI >> [INFO] Discovered user interface: org.scijava.ui.awt.AWTUI >> [INFO] Discovered user interface: org.scijava.ui.swing.mdi.SwingMdiUI >> [btupper@fcm-flow ~]$ > > -- > ImageJ mailing list: http://imagej.nih.gov/ij/list.html -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html |
On Dec 16, 2014, at 9:43 PM, Ben Tupper <[hidden email]> wrote:
> > On Dec 16, 2014, at 7:19 PM, Rasband, Wayne (NIH/NIMH) [E] <[hidden email]> wrote: > >> On Dec 16, 2014, at 3:11 PM, Ben Tupper <[hidden email]> wrote: >>> >>> Hello, >>> >>> I'm learning to use Fiji in a headless CentOS 6 environment. I first updated fiji using... >>> >>> $ fiji --update update >>> >>> >>> I have a simple macro, '~/hello.ijm', adapted from this one... http://rsb.info.nih.gov/ij/macros/SaveTextFileDemo.txt >>> >>> // >>> //START ~/hello.ijm >>> // >>> f = File.open("/home/btupper/hello.txt"); >>> // use d2s() function (double to string) to specify decimal places >>> for (i=0; i<=2*PI; i+=0.01) >>> print(f, d2s(i,6) + " \t" + d2s(sin(i),6) + " \t" + d2s(cos(i),6)); >>> // >>> //FINISH ~/hello.ijm >>> // >>> >>> I then run the macro from the command line. The macro successfully creates and populates the '~/hello.txt' file. However, I get log4j warnings and an error as shown below. (Note, I have pasted in below the entire output when I set the --debug flag.) >> >> You should report this bug using Fiji’s Help>Report a Bug command. The bug report will automatically provide more information about your setup and it will help the Fiji developers keep track of your bug report so that it is not forgotten. http://imagej.net/Bugs >> It appears that this is identical to an existing bug report: http://fiji.sc/bugzilla/show_bug.cgi?id=961 I have been away from ImageJ for so long - I am astounded by the changes and still a bit lost. Cheers, Ben >> -wayne >> >>> [btupper@fcm-flow ~]$ fiji --headless -macro /home/btupper/hello.ijm >>> log4j:WARN No appenders could be found for logger (org.bushe.swing.event.EventService). >>> log4j:WARN Please initialize the log4j system properly. >>> log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info. >>> [ERROR] Skipping unsupported option -port7 >>> >>> Here is a bit more info about the Fiji installation. >>> >>> [btupper@fcm-flow ~]$ fiji --print-java-home >>> /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24/ >>> [btupper@fcm-flow ~]$ fiji --print-ij-dir >>> /opt/Fiji.app >>> >>> >>> Do I need to worry about the warnings? I can't locate any instructions for initializing log4j on the Fiji website. I have found these 3rd party instructions [ http://www.javabeat.net/baisc-steps-to-configure-log4j-using-xml-and-properties-file/ ] but I have no idea if the are appropriate for what Fiji requires. >>> >>> I also have no idea how to resolve the error. >>> > > Ah - will do. I assumed that it was something in my own setup - I just noticed that log4j is distributed with Fiji in the Fiji/jars subdirectory. > > >>> Any suggestions? >>> >>> Thanks! >>> Ben >>> >>> >>> P.S. Below is the command and output with --debug set >>> >>> [btupper@fcm-flow ~]$ fiji --debug --headless -macro /home/btupper/hello.ijm >>> Available RAM: 3727MB, using 3/4 of that: 2796MB >>> JRE not found in '/opt/Fiji.app/jre' >>> JAVA_HOME contains a JRE: '/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre' >>> Re-executing with correct library lookup path (/opt/Fiji.app/lib/linux64:/opt/Fiji.app/mm/linux64) >>> Available RAM: 3727MB, using 3/4 of that: 2796MB >>> JRE not found in '/opt/Fiji.app/jre' >>> JAVA_HOME contains a JRE: '/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre' >>> Appending missing -batch flag for headless operation. >>> java -Dpython.cachedir.skip=true -Dplugins.dir=/opt/Fiji.app -Xmx2796m -Djava.awt.headless=true -Dapple.awt.UIElement=true -Xincgc -XX:PermSize=128m -Dsun.java.command=ImageJ -Djava.class.path=/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar -Dimagej.dir=/opt/Fiji.app -Dij.dir=/opt/Fiji.app -Dfiji.dir=/opt/Fiji.app -Dfiji.defaultLibPath=lib/amd64/server/libjvm.so -Dfiji.executable=/opt/Fiji.app/fiji-linux64 -Dij.executable=/opt/Fiji.app/fiji-linux64 -Djava.library.path=/opt/Fiji.app/lib/linux64:/opt/Fiji.app/mm/linux64 -Dij.debug=true -Dscijava.log.level=debug net.imagej.launcher.ClassLauncher -classpath /opt/Fiji.app/jars/ij-1.49m.jar fiji.Main -port7 -macro /home/btupper/hello.ijm -batch >>> Using JAVA_HOME /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre >>> Opening Java library /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre/lib/amd64/server/libjvm.so >>> Adding option: -Djava.home=/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24/ >>> Launching main class fiji.Main with parameters [-port7, -macro, /home/btupper/hello.ijm, -batch] >>> Class loader = sun.misc.Launcher$AppClassLoader@b92d342 >>> ij1.plugin.dirs: null >>> $HOME/.plugins: /home/btupper/.plugins does not exist >>> Launching main class net.imagej.Main with parameters [-port7, -macro, /home/btupper/hello.ijm, -batch] >>> Class loader = sun.misc.Launcher$AppClassLoader@b92d342 >>> Checking class loader: sun.misc.Launcher$AppClassLoader@b92d342 >>> Checking URL: file:/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar >>> Not Eclipse because first entry is: file:/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar >>> [DEBUG] Creating service: org.scijava.event.DefaultEventService >>> [DEBUG] Creating service: org.scijava.log.StderrLogService >>> [DEBUG] Created service 'org.scijava.log.StderrLogService' in 2 ms >>> [DEBUG] Creating service: org.scijava.thread.DefaultThreadService >>> [DEBUG] Created service 'org.scijava.thread.DefaultThreadService' in 1 ms >>> [DEBUG] Created service 'org.scijava.event.DefaultEventService' in 47 ms >>> [DEBUG] Creating service: org.scijava.script.DefaultScriptService >>> [DEBUG] Creating service: org.scijava.plugin.DefaultPluginService >>> [INFO] Found 777 plugins. >>> [DEBUG] - class='org.scijava.module.process.DebugPreprocessor', priority=Infinity, enabled=true, pluginType=PreprocessorPlugin >>> [DEBUG] - class='org.scijava.module.process.DebugPostprocessor', priority=Infinity, enabled=true, pluginType=PostprocessorPlugin >>> [DEBUG] - class='net.imagej.plugins.tools.KonamiHandler', name='Konami', priority=Infinity, enabled=true, pluginType=Tool >>> [DEBUG] - class='org.scijava.event.DefaultEventService', priority=100000.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.module.process.ValidityPreprocessor', priority=10001.0, enabled=true, pluginType=PreprocessorPlugin >>> [DEBUG] - class='org.scijava.ui.UIPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin >>> [DEBUG] - class='org.scijava.display.ActiveDisplayPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin >>> [DEBUG] - class='org.scijava.module.process.GatewayPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin >>> [DEBUG] - class='org.scijava.module.process.ServicePreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin >>> [DEBUG] - class='net.imagej.display.ActiveImagePreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin >>> [DEBUG] - class='net.imagej.legacy.plugin.ActiveImagePlusPreprocessor', priority=10000.0, enabled=true, pluginType=PreprocessorPlugin >>> [DEBUG] - class='io.scif.bf.BioFormatsFormat', name='Bio-Formats Compatibility Format', priority=10000.0, enabled=true, pluginType=Format >>> [DEBUG] - class='net.imagej.ops.slicer.SlicewiseRAI2RAI', name='slicemapper', priority=10000.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.arithmetic.add.parallel.AddConstantToArrayDoubleImageP', name='add', priority=111.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.arithmetic.add.parallel.AddConstantToArrayByteImageP', name='add', priority=110.0, enabled=true, pluginType=Op >>> [DEBUG] - class='io.scif.ome.translators.OMETIFFTranslator$OMEtoOMETIFFTranslator', priority=101.0, enabled=true, pluginType=ToOMETranslator >>> [DEBUG] - class='io.scif.ome.translators.OMETIFFTranslator$OMETIFFtoOMETranslator', priority=101.0, enabled=true, pluginType=FromOMETranslator >>> [DEBUG] - class='io.scif.bf.ome.BioFormatsTranslator$BioFormatsOMETranslator', priority=101.0, enabled=true, pluginType=ToOMETranslator >>> [DEBUG] - class='net.imagej.app.ToplevelImageJApp', name='ImageJ', priority=101.0, enabled=true, pluginType=App >>> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToArrayDoubleImage', name='add', priority=101.0, enabled=true, pluginType=Op >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTMessageWidget', priority=100.0, enabled=true, pluginType=InputWidget >>> [DEBUG] - class='org.scijava.module.process.InitPreprocessor', priority=100.0, enabled=true, pluginType=PreprocessorPlugin >>> [DEBUG] - class='org.scijava.script.DefaultScriptService', priority=100.0, enabled=true, pluginType=Service >>> [DEBUG] - class='net.imagej.lut.DefaultLUTService', priority=100.0, enabled=true, pluginType=Service >>> [DEBUG] - class='net.imagej.legacy.display.LegacyImageDisplayViewer', priority=100.0, enabled=true, pluginType=DisplayViewer >>> [DEBUG] - class='net.imagej.legacy.display.LegacyTextDisplayViewer', priority=100.0, enabled=true, pluginType=DisplayViewer >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingMessageWidget', priority=100.0, enabled=true, pluginType=InputWidget >>> [DEBUG] - class='net.imagej.ui.swing.overlay.RectangleJHotDrawAdapter', priority=100.0, enabled=true, pluginType=JHotDrawAdapter >>> [DEBUG] - class='net.imagej.ui.swing.overlay.ThresholdJHotDrawAdapter', priority=100.0, enabled=true, pluginType=JHotDrawAdapter >>> [DEBUG] - class='io.scif.ome.translators.BMPTranslator$BMPOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator >>> [DEBUG] - class='io.scif.ome.translators.MicromanagerTranslator$MicromanagerOMETranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator >>> [DEBUG] - class='io.scif.ome.translators.OBFTranslator$OBFOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator >>> [DEBUG] - class='io.scif.ome.translators.TIFFTranslator$TIFFOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator >>> [DEBUG] - class='io.scif.ome.translators.TIFFTranslator$OMETIFFTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator >>> [DEBUG] - class='io.scif.ome.translators.APNGTranslator$OMEAPNGTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator >>> [DEBUG] - class='io.scif.ome.translators.APNGTranslator$APNGOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator >>> [DEBUG] - class='io.scif.ome.translators.ICSTranslator$OMEICSTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator >>> [DEBUG] - class='io.scif.ome.translators.ICSTranslator$ICSOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator >>> [DEBUG] - class='io.scif.ome.translators.DICOMTranslator$DICOMOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator >>> [DEBUG] - class='io.scif.ome.translators.NRRDTranslator$NRRDOMETranslator', priority=100.0, enabled=true, pluginType=ToOMETranslator >>> [DEBUG] - class='io.scif.ome.translators.EPSTranslator$OMEEPSTranslator', priority=100.0, enabled=true, pluginType=FromOMETranslator >>> [DEBUG] - class='net.imagej.operator.OpAdd', name='Add', priority=100.0, enabled=true, pluginType=CalculatorOp >>> [DEBUG] - class='net.imagej.app.ImageJApp', name='ImageJ', priority=100.0, enabled=true, pluginType=App >>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingRectangleTool', name='Rectangle', description='Rectangular overlays', iconPath='/icons/tools/rectangle.png', priority=100.0, enabled=true, pluginType=Tool >>> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToArrayByteImage', name='add', priority=100.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$AddOp', name='add', priority=100.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$DivideOp', name='divide', priority=100.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.legacy.ui.LegacyUI', name='legacy', priority=100.0, enabled=true, pluginType=UserInterface >>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$MultiplyOp', name='multiply', priority=100.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$SubtractOp', name='subtract', priority=100.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ui.swing.overlay.EllipseJHotDrawAdapter', priority=99.0, enabled=true, pluginType=JHotDrawAdapter >>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingEllipseTool', name='Oval', description='Oval selections', iconPath='/icons/tools/oval.png', priority=99.0, enabled=true, pluginType=Tool >>> [DEBUG] - class='net.imagej.operator.OpSubtract', name='Subtract', priority=99.0, enabled=true, pluginType=CalculatorOp >>> [DEBUG] - class='net.imagej.ui.swing.overlay.GeneralPathJHotDrawAdapter', priority=98.5, enabled=true, pluginType=JHotDrawAdapter >>> [DEBUG] - class='net.imagej.ui.swing.overlay.PolygonJHotDrawAdapter', priority=98.0, enabled=true, pluginType=JHotDrawAdapter >>> [DEBUG] - class='net.imagej.operator.OpMultiply', name='Multiply', priority=98.0, enabled=true, pluginType=CalculatorOp >>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPolygonTool', name='Polygon', description='Polygon overlays', iconPath='/icons/tools/polygon.png', priority=98.0, enabled=true, pluginType=Tool >>> [DEBUG] - class='net.imagej.ui.swing.overlay.LineJHotDrawAdapter', priority=97.0, enabled=true, pluginType=JHotDrawAdapter >>> [DEBUG] - class='net.imagej.operator.OpDivide', name='Divide', priority=97.0, enabled=true, pluginType=CalculatorOp >>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingLineTool', name='Line', description='Straight line overlays', iconPath='/icons/tools/line.png', priority=97.0, enabled=true, pluginType=Tool >>> [DEBUG] - class='net.imagej.ui.swing.overlay.PolylineJHotDrawAdapter', priority=96.0, enabled=true, pluginType=JHotDrawAdapter >>> [DEBUG] - class='net.imagej.operator.OpAnd', name='AND', priority=96.0, enabled=true, pluginType=CalculatorOp >>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPolylineTool', name='Polyline', description='Polyline overlays', iconPath='/icons/tools/polyline.png', priority=96.0, enabled=true, pluginType=Tool >>> [DEBUG] - class='net.imagej.ui.swing.overlay.AngleJHotDrawAdapter', priority=95.0, enabled=true, pluginType=JHotDrawAdapter >>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingAngleTool', name='Angle', description='Angle overlays', iconPath='/icons/tools/angle.png', priority=95.0, enabled=true, pluginType=Tool >>> [DEBUG] - class='net.imagej.operator.OpOr', name='OR', priority=95.0, enabled=true, pluginType=CalculatorOp >>> [DEBUG] - class='net.imagej.ui.swing.overlay.PointJHotDrawOverlay', priority=94.0, enabled=true, pluginType=JHotDrawAdapter >>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPointTool', name='Point', description='Point overlays', iconPath='/icons/tools/point.png', priority=94.0, enabled=true, pluginType=Tool >>> [DEBUG] - class='net.imagej.operator.OpXor', name='XOR', priority=94.0, enabled=true, pluginType=CalculatorOp >>> [DEBUG] - class='net.imagej.operator.OpMin', name='Min', priority=93.0, enabled=true, pluginType=CalculatorOp >>> [DEBUG] - class='net.imagej.operator.OpMax', name='Max', priority=92.0, enabled=true, pluginType=CalculatorOp >>> [DEBUG] - class='net.imagej.operator.OpAverage', name='Average', priority=91.0, enabled=true, pluginType=CalculatorOp >>> [DEBUG] - class='net.imagej.operator.OpDifference', name='Difference', priority=90.0, enabled=true, pluginType=CalculatorOp >>> [DEBUG] - class='net.imagej.operator.OpCopy', name='Copy', priority=89.0, enabled=true, pluginType=CalculatorOp >>> [DEBUG] - class='net.imagej.operator.OpTransparentZero', name='Transparent-zero', priority=88.0, enabled=true, pluginType=CalculatorOp >>> [DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.FastLAPTrackerFactory', priority=10.0, enabled=true, pluginType=SpotTrackerFactory >>> [DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.SimpleFastLAPTrackerFactory', priority=10.0, enabled=true, pluginType=SpotTrackerFactory >>> [DEBUG] - class='net.imagej.legacy.DefaultLegacyService', priority=1.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingChoiceRadioWidget', priority=1.0, enabled=true, pluginType=InputWidget >>> [DEBUG] - class='net.imagej.ops.onthefly.JavassistOptimizer', priority=1.0, enabled=true, pluginType=Optimizer >>> [DEBUG] - class='fiji.plugin.trackmate.visualization.threedviewer.SpotDisplayer3DFactory', priority=1.0, enabled=true, pluginType=ViewFactory >>> [DEBUG] - class='fiji.plugin.trackmate.tracking.kdtree.NearestNeighborTrackerFactory', priority=1.0, enabled=true, pluginType=SpotTrackerFactory >>> [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotContrastAndSNRAnalyzerFactory', priority=1.0, enabled=true, pluginType=SpotAnalyzerFactory >>> [DEBUG] - class='net.imagej.ops.invert.InvertII', name='invert', priority=1.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToDouble', name='add', priority=0.6, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToLong', name='add', priority=0.5, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToFloat', name='add', priority=0.4, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToInteger', name='add', priority=0.3, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToShort', name='add', priority=0.2, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToByte', name='add', priority=0.1, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.plugins.commands.assign.AndDataValuesWith', menu='Process > Math > AND...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.app.AboutImageJ', label='About ImageJ...', menu='Help > About ImageJ...', iconPath='/icons/commands/information.png', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.AbsDataValues', menu='Process > Math > Abs...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionAdaptiveMedian', menu='Process > Noise > Noise Reduction > Adaptive Median', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.AddAxis', menu='Image > Axes > Add Axis...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.AddData', menu='Image > Data > Add Data...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.overlay.AddImage', menu='Image > Overlay > Add Image', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.AddNoiseToDataValues', menu='Process > Noise > Add Noise...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.AddSpecifiedNoiseToDataValues', menu='Process > Noise > Add Specified Noise...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.AddToDataValues', menu='Process > Math > Add...', iconPath='/icons/commands/sum.png', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionAlphaTrimmedMean', menu='Process > Noise > Noise Reduction > Alpha Trimmed Mean', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.animation.AnimationOptions', menu='Image > Animation > Animation Options...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.options.OptionsAppearance', menu='Edit > Options > Appearance...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>> [DEBUG] - class='net.imagej.ops.commands.threshold.GlobalThresholder', menu='Image > Threshold > Apply Threshold', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.options.OptionsArrowTool', menu='Edit > Options > Arrow Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>> [DEBUG] - class='net.imagej.plugins.commands.display.AutoContrast', menu='Image > Adjust > Auto-Contrast', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.axispos.AxisPositionBackward', menu='Image > Axes > Axis Position Backward', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.axispos.AxisPositionForward', menu='Image > Axes > Axis Position Forward', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.misc.Benchmark', menu='Plugins > Utilities > Benchmark', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.Binner', menu='Image > Transform > Bin...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.binary.Binarize', menu='Process > Binary > Binarize...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.display.interactive.BrightnessContrast', menu='Image > Adjust > Brightness/Contrast...', iconPath='/icons/commands/contrast.png', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.debug.ButtonDemo', menu='Plugins > Sandbox > Button Demo', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.display.CaptureImage', menu='Plugins > Utilities > Capture Image', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.display.CaptureScreen', menu='Plugins > Utilities > Capture Screen', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.typechange.TypeChanger', menu='Image > Type > Change...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.display.ChannelsTool', menu='Image > Color > Channels Tool...', iconPath='/icons/commands/color_wheel.png', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.options.OptionsChannels', menu='Edit > Options > Channels...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>> [DEBUG] - class='org.scijava.plugins.commands.io.ClearRecent', label='Clear Recent', menu='File > Open Recent > Clear List', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='org.scijava.plugins.commands.display.Close', menu='File > Close', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.binary.CloseBinaryImage', menu='Process > Binary > Close', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='org.scijava.plugins.commands.display.CloseAll', menu='File > Close All', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.options.OptionsCompatibility', menu='Edit > Options > Compatibility...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>> [DEBUG] - class='net.imagej.options.OptionsCompiler', menu='Edit > Options > Compiler...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionContraharmonicMean', menu='Process > Noise > Noise Reduction > Contraharmonic Mean', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.options.OptionsConversions', menu='Edit > Options > Conversions...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>> [DEBUG] - class='net.imagej.ops.commands.convert.ConvertImgPlus', menu='Image > Convert', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.ops.commands.convolve.Convolve', menu='Image > Convolve', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.app.CopyToSystem', menu='Edit > Copy To System', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.binary.CreateMask', menu='Process > Binary > Create Mask...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.app.CreateShortcut', menu='Plugins > Shortcuts > Create Shortcut...', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.CropImage', menu='Image > Crop', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.options.OptionsDicom', menu='Edit > Options > DICOM...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>> [DEBUG] - class='net.imagej.options.OptionsOverlay', label='Default Overlay Settings', menu='Image > Overlay > Overlay Options...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.DeleteAxis', menu='Image > Axes > Delete Axis...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.DeleteData', menu='Image > Data > Delete Data...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.display.interactive.DeleteThreshold', menu='Image > Adjust > Delete Threshold', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.display.DeselectOverlays', menu='Edit > Selection > Deselect Overlays', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='org.scijava.ui.swing.commands.DialogPromptDemo', menu='Plugins > Sandbox > Dialog Prompt Demo', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.binary.DilateBinaryImage', menu='Process > Binary > Dilate', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.DivideDataValuesBy', menu='Process > Math > Divide...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='org.scijava.plugins.commands.debug.DumpStack', menu='Plugins > Debug > Dump Stack', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.DuplicateImage', menu='Image > Duplicate', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.DuplicateImageContext', menu='Duplicate...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsEast', menu='Process > Shadows > East', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.EditAxes', menu='Image > Axes > Edit Axes...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.EquationDataValues', menu='Process > Math > Equation...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.binary.ErodeBinaryImage', menu='Process > Binary > Erode', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.ExpDataValues', menu='Process > Math > Exp...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.FillDataValues', menu='Edit > Fill', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='org.scijava.ui.swing.commands.CommandFinder', menu='Plugins > Utilities > Find Commands...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.neigh.FindEdges', menu='Process > Find Edges', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.display.Flatten', menu='Image > Overlay > Flatten', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.FlipAxis', menu='Image > Transform > Flip Axis', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.rotate.FlipHorizontally', menu='Image > Transform > Flip Horizontally', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.rotate.FlipVertically', menu='Image > Transform > Flip Vertically', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.tools.FloodFillToolConfig', label='Flood Fill Tool', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.options.OptionsFont', menu='Edit > Options > Fonts...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>> [DEBUG] - class='net.imagej.plugins.commands.overlay.FromOverlayManager', menu='Image > Overlay > From Overlay Manager', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.GammaDataValues', menu='Process > Math > Gamma...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.GaussianBlur', menu='Process > Filters > Gaussian Blur...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionGeometricMean', menu='Process > Noise > Noise Reduction > Geometric Mean', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionHarmonicMean', menu='Process > Noise > Noise Reduction > Harmonic Mean', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.display.HistogramPlot', menu='Analyze > Histogram Plot', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.calculator.ImageCalculator', menu='Process > Image Calculator...', iconPath='/icons/commands/calculator.png', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.io.OpenDataset', menu='File > Import > Image... ', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.io.SaveDataset', menu='File > Export > Image... ', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.app.ImageJWebsite', menu='Help > ImageJ Website...', iconPath='/icons/commands/world_link.png', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.legacy.ImageJ2Options', label='ImageJ2 Options', menu='Edit > Options > ImageJ2...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>> [DEBUG] - class='net.imagej.options.OptionsInputOutput', menu='Edit > Options > Input/Output...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>> [DEBUG] - class='net.imagej.plugins.commands.debug.InspectImg', menu='Plugins > Debug > Inspect Image', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='org.scijava.ui.swing.commands.InspectObjects', menu='Plugins > Debug > Inspect Objects', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='org.scijava.plugins.commands.debug.InvalidCommandDemo$InvalidCommand', menu='Plugins > Debug > Invalid Command', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.InvertDataValues', menu='Edit > Invert...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.lut.LUTSelector', label='LUT Selector', menu='Image > Lookup Tables > Select...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.overlay.OverlayLabels', menu='Image > Overlay > Labels...', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.options.OptionsLineWidth', menu='Edit > Options > Line Width...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>> [DEBUG] - class='net.imagej.plugins.commands.app.ListShortcuts', menu='Plugins > Shortcuts > List Shortcuts...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.LogDataValues', menu='Process > Math > Log...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='org.scijava.ui.swing.options.OptionsLookAndFeel', menu='Edit > Options > Look and Feel...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>> [DEBUG] - class='net.imagej.plugins.commands.binary.MakeBinary', menu='Process > Binary > Make Binary...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.overlay.ConvertToMask', menu='Process > Binary > Make Mask Overlay...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.debug.MandelbrotSetImage', menu='Plugins > Sandbox > Mandelbrot Set', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.MaxDataValues', menu='Process > Math > Max...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMax', menu='Process > Noise > Noise Reduction > Maximum', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMean', menu='Process > Noise > Noise Reduction > Mean', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.debug.MeasurementDemo', menu='Plugins > Sandbox > Measurement Demo', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMedian', menu='Process > Noise > Noise Reduction > Median', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.options.OptionsMemoryAndThreads', menu='Edit > Options > Memory & Threads...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMidpoint', menu='Process > Noise > Noise Reduction > Midpoint', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.MinDataValues', menu='Process > Math > Min...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMin', menu='Process > Noise > Noise Reduction > Minimum', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.options.OptionsMisc', menu='Edit > Options > Misc...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>> [DEBUG] - class='net.imagej.legacy.plugin.MixedWorldCommand', menu='Plugins > Sandbox > Mixed World Command', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.debug.MultidimImage', menu='Plugins > Sandbox > Multidimensional Test Image', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.MultiplyDataValuesBy', menu='Process > Math > Multiply...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.NanBackground', menu='Process > Math > NaN Background', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.io.NewImage', label='New Image...', menu='File > New > Image...', iconPath='/icons/commands/picture.png', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNorth', menu='Process > Shadows > North', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNortheast', menu='Process > Shadows > Northeast', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNorthwest', menu='Process > Shadows > Northwest', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.OrDataValuesWith', menu='Process > Math > OR...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.binary.OpenBinaryImage', menu='Process > Binary > Open', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='org.scijava.plugins.commands.io.OpenFile', menu='File > Open...', iconPath='/icons/commands/folder_picture.png', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomOriginalScale', menu='Image > Zoom > Original Scale', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.display.interactive.OrthogonalViews', menu='Image > Stacks > Orthogonal Views', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.ui.swing.commands.OverlayManager', menu='Image > Overlay > Overlay Manager', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.overlay.OverlayProperties', label='Overlay Properties...', menu='Image > Overlay > Properties...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.tools.PaintBrushToolConfig', label='Paintbrush Tool', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='org.scijava.plugins.commands.debug.ParamAssignOrder', menu='Plugins > Sandbox > Parameter Assignment Order', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.tools.PencilToolConfig', label='Pencil Tool', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='fiji.DefaultFijiService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='fiji.patches.FijiAppConfiguration', priority=0.0, enabled=true, pluginType=LegacyAppConfiguration >>> [DEBUG] - class='fiji.patches.OldLegacyEditor', priority=0.0, enabled=true, pluginType=LegacyEditor >>> [DEBUG] - class='fiji.patches.OldAppConfiguration', priority=0.0, enabled=true, pluginType=LegacyAppConfiguration >>> [DEBUG] - class='net.imglib2.meta.units.DefaultUnitService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTObjectWidget', priority=0.0, enabled=true, pluginType=InputWidget >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTToggleWidget', priority=0.0, enabled=true, pluginType=InputWidget >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTChoiceWidget', priority=0.0, enabled=true, pluginType=InputWidget >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTNumberWidget', priority=0.0, enabled=true, pluginType=InputWidget >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTTextWidget', priority=0.0, enabled=true, pluginType=InputWidget >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTFileWidget', priority=0.0, enabled=true, pluginType=InputWidget >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTButtonWidget', priority=0.0, enabled=true, pluginType=InputWidget >>> [DEBUG] - class='net.imagej.plugins.uploaders.ssh.SSHFileUploader', priority=0.0, enabled=true, pluginType=Uploader >>> [DEBUG] - class='net.imagej.plugins.uploaders.ssh.SFTPFileUploader', priority=0.0, enabled=true, pluginType=Uploader >>> [DEBUG] - class='net.imagej.plugins.uploaders.webdav.WebDAVUploader', priority=0.0, enabled=true, pluginType=Uploader >>> [DEBUG] - class='org.scijava.plugins.text.markdown.MarkdownTextFormat', priority=0.0, enabled=true, pluginType=TextFormat >>> [DEBUG] - class='net.imagej.ui.awt.AWTRenderingService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='net.imagej.ui.awt.AWTScreenCaptureService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.object.DefaultObjectService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.convert.DefaultConverter', priority=0.0, enabled=true, pluginType=Converter >>> [DEBUG] - class='org.scijava.convert.DefaultConvertService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.input.DefaultInputService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.ui.DefaultUIService', 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class='org.scijava.io.DefaultRecentFileService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.io.console.OpenArgument', priority=0.0, enabled=true, pluginType=ConsoleArgument >>> [DEBUG] - class='org.scijava.io.DefaultIOService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.widget.DefaultWidgetService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.menu.DefaultMenuService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.tool.DefaultToolService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.app.DefaultAppService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.app.DefaultStatusService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.module.DefaultModuleService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.welcome.DefaultWelcomeService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.thread.DefaultThreadService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.script.io.ScriptIOPlugin', priority=0.0, enabled=true, pluginType=IOPlugin >>> [DEBUG] - class='org.scijava.script.DefaultScriptHeaderService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.event.DefaultEventHistory', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.platform.DefaultPlatformService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.options.DefaultOptionsService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.command.DefaultCommandService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.command.console.RunArgument', priority=0.0, enabled=true, pluginType=ConsoleArgument >>> [DEBUG] - class='org.scijava.console.DefaultConsoleService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.SciJava', priority=0.0, enabled=true, pluginType=Gateway >>> [DEBUG] - class='net.imagej.operator.DefaultCalculatorService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='net.imagej.autoscale.DefaultAutoscaleService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='net.imagej.sampler.DefaultSamplerService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='net.imagej.lut.io.LUTIOPlugin', priority=0.0, enabled=true, pluginType=IOPlugin >>> [DEBUG] - class='net.imagej.display.DefaultDatasetView', priority=0.0, enabled=true, pluginType=DataView >>> [DEBUG] - class='net.imagej.display.DefaultImageDisplay', priority=0.0, enabled=true, pluginType=Display >>> [DEBUG] - class='net.imagej.display.DefaultZoomService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='net.imagej.display.DefaultOverlayService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='net.imagej.display.DefaultImageDisplayService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='net.imagej.display.DefaultOverlayView', priority=0.0, enabled=true, pluginType=DataView >>> [DEBUG] - class='net.imagej.display.DefaultWindowService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='net.imagej.types.DataType32BitSignedFloat', priority=0.0, enabled=true, pluginType=DataType >>> [DEBUG] - class='net.imagej.types.DataType12BitUnsignedInteger', priority=0.0, enabled=true, pluginType=DataType >>> [DEBUG] - class='net.imagej.types.DataType64BitSignedFloat', priority=0.0, enabled=true, pluginType=DataType >>> [DEBUG] - class='net.imagej.types.DataType8BitSignedInteger', priority=0.0, enabled=true, pluginType=DataType >>> [DEBUG] - class='net.imagej.types.DataType32BitUnsignedInteger', priority=0.0, enabled=true, 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[DEBUG] - class='io.scif.codec.HuffmanCodec', priority=0.0, enabled=true, pluginType=Codec >>> [DEBUG] - class='io.scif.refs.DefaultRefManagerService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='io.scif.services.DefaultFormatService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='io.scif.codec.RPZACodec', priority=0.0, enabled=true, pluginType=Codec >>> [DEBUG] - class='io.scif.codec.MJPBCodec', priority=0.0, enabled=true, pluginType=Codec >>> [DEBUG] - class='io.scif.codec.PassthroughCodec', priority=0.0, enabled=true, pluginType=Codec >>> [DEBUG] - class='io.scif.filters.PlaneSeparatorMetadata', priority=0.0, enabled=true, pluginType=MetadataWrapper >>> [DEBUG] - class='io.scif.filters.ChannelFiller', priority=0.0, enabled=true, pluginType=Filter >>> [DEBUG] - class='io.scif.codec.PackbitsCodec', priority=0.0, enabled=true, pluginType=Codec >>> [DEBUG] - class='io.scif.filters.MinMaxFilter', priority=0.0, enabled=true, pluginType=Filter 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[DEBUG] - class='net.imagej.legacy.LegacyCommandline$IJPath', priority=0.0, enabled=true, pluginType=ConsoleArgument >>> [DEBUG] - class='net.imagej.legacy.plugin.LegacyAutoImporter', priority=0.0, enabled=true, pluginType=AutoImporter >>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Macro', priority=0.0, enabled=true, pluginType=ConsoleArgument >>> [DEBUG] - class='net.imagej.legacy.LegacyJavaRunner', priority=0.0, enabled=true, pluginType=JavaRunner >>> [DEBUG] - class='net.imagej.legacy.display.DefaultImagePlusDisplayViewer', priority=0.0, enabled=true, pluginType=DisplayViewer >>> [DEBUG] - class='net.imagej.legacy.display.DefaultImagePlusDisplay', priority=0.0, enabled=true, pluginType=Display >>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Run', priority=0.0, enabled=true, pluginType=ConsoleArgument >>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Filename', priority=0.0, enabled=true, pluginType=ConsoleArgument >>> [DEBUG] - 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class='net.imagej.ui.swing.sdi.viewer.SwingSdiImageDisplayViewer', priority=0.0, enabled=true, pluginType=DisplayViewer >>> [DEBUG] - class='net.imagej.ui.swing.viewer.table.SwingTableDisplayViewer', priority=0.0, enabled=true, pluginType=DisplayViewer >>> [DEBUG] - class='net.imagej.ui.swing.overlay.JHotDrawService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='net.imagej.ui.swing.mdi.viewer.SwingMdiImageDisplayViewer', priority=0.0, enabled=true, pluginType=DisplayViewer >>> [DEBUG] - class='net.imagej.ui.swing.widget.SwingColorTableWidget', priority=0.0, enabled=true, pluginType=InputWidget >>> [DEBUG] - class='net.imagej.ui.swing.widget.SwingDimSelectionWidget', priority=0.0, enabled=true, pluginType=InputWidget >>> [DEBUG] - class='net.imagej.ui.swing.widget.SwingHistogramWidget', priority=0.0, enabled=true, pluginType=InputWidget >>> [DEBUG] - class='net.imagej.updater.FileUploader', priority=0.0, enabled=true, pluginType=Uploader >>> [DEBUG] - class='net.imagej.updater.DefaultUpdateService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='net.imagej.updater.DefaultUploaderService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='net.imagej.ImageJ', priority=0.0, enabled=true, pluginType=Gateway >>> [DEBUG] - class='net.imagej.ops.DefaultOpService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='net.imagej.ops.threshold.LocalMean', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.DefaultOpMatchingService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='net.imagej.plugins.commands.dataset.LoadDataset', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.overlay.SelectedManagerOverlayProperties', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.misc.ApplyLookupTable', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.plugins.scripting.jruby.JRubyScriptHeader', priority=0.0, enabled=true, pluginType=ScriptHeader >>> [DEBUG] - class='fiji.plugin.trackmate.action.TrackBranchAnalysis$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackLocationAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer >>> [DEBUG] - class='fiji.plugin.trackmate.visualization.hyperstack.HyperStackDisplayerFactory', priority=0.0, enabled=true, pluginType=ViewFactory >>> [DEBUG] - class='fiji.plugin.trackmate.features.edges.EdgeTimeLocationAnalyzer', priority=0.0, enabled=true, pluginType=EdgeAnalyzer >>> [DEBUG] - class='fiji.plugin.trackmate.action.ResetRadiusAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>> [DEBUG] - class='fiji.plugin.trackmate.action.RecalculateFeatureAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>> [DEBUG] - class='fiji.plugin.trackmate.action.ISBIChallengeExporter$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>> [DEBUG] - class='fiji.plugin.trackmate.action.MergeFileAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>> [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotRadiusEstimatorFactory', priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory >>> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackBranchingAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer >>> [DEBUG] - class='fiji.plugin.trackmate.action.PlotNSpotsVsTimeAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>> [DEBUG] - class='fiji.plugin.trackmate.action.ExportStatsToIJAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>> [DEBUG] - class='fiji.plugin.trackmate.features.edges.EdgeTargetAnalyzer', priority=0.0, enabled=true, pluginType=EdgeAnalyzer >>> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackDurationAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer >>> [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotIntensityAnalyzerFactory', priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory >>> [DEBUG] - class='fiji.plugin.trackmate.features.edges.EdgeVelocityAnalyzer', priority=0.0, enabled=true, pluginType=EdgeAnalyzer >>> [DEBUG] - class='fiji.plugin.trackmate.detection.LogDetectorFactory', priority=0.0, enabled=true, pluginType=SpotDetectorFactory >>> [DEBUG] - class='fiji.plugin.trackmate.action.ExportTracksToXML$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>> [DEBUG] - class='fiji.plugin.trackmate.action.LinkNew3DViewerAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>> [DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.SimpleLAPTrackerFactory', priority=0.0, enabled=true, pluginType=SpotTrackerFactory >>> [DEBUG] - class='fiji.plugin.trackmate.action.ResetSpotTimeFeatureAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>> [DEBUG] - class='fiji.plugin.trackmate.action.RadiusToEstimatedAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>> [DEBUG] - class='fiji.plugin.trackmate.action.IcyTrackExporter$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>> [DEBUG] - class='fiji.plugin.trackmate.action.CaptureOverlayAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>> [DEBUG] - class='fiji.plugin.trackmate.tracking.sparselap.SimpleSparseLAPTrackerFactory', priority=0.0, enabled=true, pluginType=SpotTrackerFactory >>> [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotMorphologyAnalyzerFactory', priority=0.0, enabled=false, pluginType=SpotAnalyzerFactory >>> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackSpotQualityFeatureAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer >>> [DEBUG] - class='fiji.plugin.trackmate.action.CopyOverlayAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>> [DEBUG] - class='fiji.plugin.trackmate.tracking.sparselap.SparseLAPTrackerFactory', priority=0.0, enabled=true, pluginType=SpotTrackerFactory >>> [DEBUG] - class='fiji.plugin.trackmate.detection.ManualDetectorFactory', priority=0.0, enabled=true, pluginType=SpotDetectorFactory >>> [DEBUG] - class='fiji.plugin.trackmate.features.manual.ManualSpotColorAnalyzerFactory', priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory >>> [DEBUG] - class='fiji.plugin.trackmate.detection.DogDetectorFactory', priority=0.0, enabled=true, pluginType=SpotDetectorFactory >>> [DEBUG] - class='fiji.plugin.trackmate.action.ExtractTrackStackAction$Factory', priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>> [DEBUG] - class='fiji.plugin.trackmate.tracking.oldlap.LAPTrackerFactory', priority=0.0, enabled=true, pluginType=SpotTrackerFactory >>> [DEBUG] - class='fiji.plugin.trackmate.features.manual.ManualEdgeColorAnalyzer', priority=0.0, enabled=true, pluginType=EdgeAnalyzer >>> [DEBUG] - class='fiji.plugin.trackmate.features.spot.SpotContrastAnalyzerFactory', priority=0.0, enabled=false, pluginType=SpotAnalyzerFactory >>> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackSpeedStatisticsAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer >>> [DEBUG] - class='fiji.plugin.trackmate.detection.DownsampleLogDetectorFactory', priority=0.0, enabled=true, pluginType=SpotDetectorFactory >>> [DEBUG] - class='fiji.plugin.trackmate.visualization.trackscheme.TrackSchemeFactory', priority=0.0, enabled=true, pluginType=ViewFactory >>> [DEBUG] - class='fiji.plugin.trackmate.features.track.TrackIndexAnalyzer', priority=0.0, enabled=true, pluginType=TrackAnalyzer >>> [DEBUG] - class='io.scif.cli.commands.Help', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand >>> [DEBUG] - class='io.scif.cli.commands.Show', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand >>> [DEBUG] - class='io.scif.cli.commands.Info', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand >>> [DEBUG] - class='io.scif.cli.commands.Convert', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand >>> [DEBUG] - class='io.scif.ome.commands.OMEXMLToolCommand', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand >>> [DEBUG] - class='io.scif.ome.translators.DefaultOMETranslator', priority=0.0, enabled=true, pluginType=ToOMETranslator >>> [DEBUG] - class='io.scif.ome.services.DefaultOMEXMLService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='io.scif.ome.services.DefaultOMEMetadataService', priority=0.0, enabled=true, pluginType=Service >>> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat', priority=0.0, enabled=true, pluginType=Format >>> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat$OMETranslator', priority=0.0, enabled=true, pluginType=Translator >>> [DEBUG] - class='io.scif.tools.commands.Show', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand >>> [DEBUG] - class='io.scif.tools.commands.Help', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand >>> [DEBUG] - class='io.scif.tools.commands.Info', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand >>> [DEBUG] - class='io.scif.tools.commands.Convert', priority=0.0, enabled=true, pluginType=SCIFIOToolCommand >>> [DEBUG] - class='io.scif.lifesci.SDTFormat', priority=0.0, enabled=true, pluginType=Format >>> [DEBUG] - class='net.imagej.options.OptionsPointTool', menu='Edit > Options > Point Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>> [DEBUG] - class='net.imagej.plugins.commands.debug.PointSetDemo', menu='Plugins > Sandbox > PointSet Demo', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.PowerDataValues', menu='Process > Math > Power...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.app.Preferences', label='Preferences', menu='File > Preferences', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.options.OptionsProfilePlot', menu='Edit > Options > Profile Plot Options...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>> [DEBUG] - class='net.imagej.ops.commands.project.ProjectCommand', menu='Image > Threshold > Project', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.options.OptionsProxy', menu='Edit > Options > Proxy Settings...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>> [DEBUG] - class='net.imagej.app.QuitProgram', label='Quit', menu='File > Quit', iconPath='/icons/commands/door_in.png', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.RadialNeighborhoodSpecifier', label='Radial Neighborhood Specification', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.ReciprocalDataValues', menu='Process > Math > Reciprocal...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.RectangularNeighborhoodSpecifier', label='Rectangular Neighborhood Specification', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.display.RemoveOverlay', menu='Image > Overlay > Remove Overlay', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.display.RemoveOverlayReferences', menu='Image > Overlay > Remove Overlay References', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.ReorderAxis', menu='Image > Axes > Reorder Axis', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.ReorderData', menu='Image > Data > Reorder Data...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.options.OptionsReset', menu='Edit > Options > Reset', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.ResizeImage', menu='Image > Adjust > Resize...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.ResliceImage', menu='Image > Stacks > Reslice...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.io.RevertImage', menu='File > Revert', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.rotate.Rotate90DegreesLeft', menu='Image > Transform > Rotate 90 Degrees Left', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.rotate.Rotate90DegreesRight', menu='Image > Transform > Rotate 90 Degrees Right', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.RotateImageXY', menu='Image > Transform > Rotate...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.options.OptionsRoundedRectangleTool', menu='Edit > Options > Rounded Rect Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>> [DEBUG] - class='org.scijava.plugins.commands.script.RunScript', menu='Plugins > Run Script...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.SaltAndPepper', menu='Process > Noise > Salt and Pepper', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.io.SaveImage', menu='File > Save', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.io.SaveAsImage', menu='File > Save As...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.ui.swing.script.ScriptEditor', menu='File > New > Script...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.display.SelectOverlays', menu='Edit > Selection > Select Overlays', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.display.SelectView', menu='Edit > Selection > Select View', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.display.SelectWindow', label='Select Window...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.legacy.plugin.GetPath', label='Select path', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.axispos.SetActiveAxis', menu='Image > Axes > Set Active Axis...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.axispos.SetAxisPosition', menu='Image > Axes > Set Axis Position...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomSet', label='Set Zoom...', menu='Image > Zoom > Set...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.SetDataValues', menu='Process > Math > Set...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsDemo', menu='Process > Shadows > Shadows Demo', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.correlate.SharpenDataValues', menu='Process > Sharpen', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.misc.ShowInfo', menu='Image > Show Info...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.display.ShowLUT', menu='Image > Color > Show LUT', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.display.ShowLUTAsTable', menu='Image > Color > Show LUT As Table', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.correlate.SmoothDataValues', menu='Process > Smooth', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsSouth', menu='Process > Shadows > South', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsSoutheast', menu='Process > Shadows > Southeast', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsSouthwest', menu='Process > Shadows > Southwest', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.overlay.SelectionSpecify', menu='Edit > Selection > Specify...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.display.SpectralComposite', menu='Image > Color > Spectral Composite...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.SplitChannelsContext', menu='Split Channels', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.tools.SprayCanToolConfig', label='Spray Can Tool', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.SquareRootDataValues', menu='Process > Math > Square Root...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.SquareDataValues', menu='Process > Math > Square...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.animation.StartAnimation', menu='Image > Animation > Start Animation', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.debug.StatisticsDemo', menu='Plugins > Sandbox > Statistics Demo', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.animation.StopAllAnimations', menu='Image > Animation > Stop All Animations', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.animation.StopAnimation', menu='Image > Animation > Stop Animation', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='org.scijava.plugins.commands.debug.ShowSubscribers', menu='Plugins > Debug > Subscribers', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.SubtractFromDataValues', menu='Process > Math > Subtract...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.legacy.plugin.SwitchToLegacyMode', menu='Help > Switch to Legacy Mode', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.display.interactive.SynchronizeWindows', menu='Analyze > Tools > Synchronize Windows', iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='org.scijava.plugins.commands.debug.SystemInformation', menu='Plugins > Debug > System Information', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.debug.TableDemo', menu='Plugins > Sandbox > Table Demo', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='org.scijava.plugins.commands.debug.TextDisplayTest', menu='Plugins > Sandbox > TextDisplayTest', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.updater.PromptUserToUpdate', label='There are updates available', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.display.interactive.Threshold', menu='Image > Adjust > Threshold...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='org.scijava.ui.swing.mdi.WindowsTileVertical', menu='Window > Tile Vertical', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomToSelection', menu='Image > Zoom > To Selection', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.TranslateImage', menu='Image > Transform > Translate...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionTrimmedMean', menu='Process > Noise > Noise Reduction > Trimmed Mean', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.updater.CheckForUpdates', label='Up-to-date check', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.ui.swing.updater.ImageJUpdater', menu='Help > Update...', priority=0.0, enabled=true, pluginType=UpdaterUI >>> [DEBUG] - class='net.imagej.plugins.commands.upload.SampleImageUploader', menu='Help > Upload Sample Image', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.zoom.Zoom100Percent', menu='Image > Zoom > View 100%', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.options.OptionsWandTool', menu='Edit > Options > Wand Tool...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>> [DEBUG] - class='org.scijava.ui.swing.commands.WatchEvents', menu='Plugins > Debug > Watch Events', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsWest', menu='Process > Shadows > West', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.assign.XorDataValuesWith', menu='Process > Math > XOR...', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomIn', label='Zoom In', menu='Image > Zoom > In', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomOut', label='Zoom Out', menu='Image > Zoom > Out', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='net.imagej.ui.swing.script.TextEditor$BeanshellHighlighter', label='beanshell', priority=0.0, enabled=true, pluginType=SyntaxHighlighter >>> [DEBUG] - class='net.imagej.ui.swing.script.TextEditor$ECMAScriptHighlighter', label='ecmascript', priority=0.0, enabled=true, pluginType=SyntaxHighlighter >>> [DEBUG] - class='net.imagej.ui.swing.script.TextEditor$IJ1MacroHighlighter', label='ij1-macro', priority=0.0, enabled=true, pluginType=SyntaxHighlighter >>> [DEBUG] - class='net.imagej.ui.swing.script.TextEditor$MatlabHighlighter', label='matlab', priority=0.0, enabled=true, pluginType=SyntaxHighlighter >>> [DEBUG] - class='net.imagej.plugins.commands.app.EasterEgg', label='| It's a secret to everyone |', priority=0.0, enabled=true, pluginType=Command >>> [DEBUG] - class='io.scif.formats.APNGFormat', name='Animated PNG', priority=0.0, enabled=true, pluginType=Format >>> [DEBUG] - class='io.scif.img.converters.ArrayDataAccessConverter', name='ArrayDataAccess', priority=0.0, enabled=true, pluginType=PlaneConverter >>> [DEBUG] - class='io.scif.formats.AVIFormat', name='Audio Video Interleave', priority=0.0, enabled=true, pluginType=Format >>> [DEBUG] - class='net.imagej.plugins.tools.AxisPositionHandler', name='Axis Position Shortcuts', priority=0.0, enabled=true, pluginType=Tool >>> [DEBUG] - class='org.scijava.plugins.scripting.beanshell.BeanshellScriptLanguage', name='BeanShell', priority=0.0, enabled=true, pluginType=ScriptLanguage >>> [DEBUG] - class='org.scijava.plugins.scripting.clojure.ClojureScriptLanguage', name='Clojure', priority=0.0, enabled=true, pluginType=ScriptLanguage >>> [DEBUG] - class='net.imagej.autoscale.ConfidenceIntervalAutoscaleMethod', name='Confidence Interval', priority=0.0, enabled=true, pluginType=AutoscaleMethod >>> [DEBUG] - class='net.imagej.plugins.tools.ContextMenuHandler', name='Context Menus', priority=0.0, enabled=true, pluginType=Tool >>> [DEBUG] - class='io.scif.formats.DICOMFormat', name='DICOM', priority=0.0, enabled=true, pluginType=Format >>> [DEBUG] - class='net.imagej.autoscale.DefaultAutoscaleMethod', name='Default', priority=0.0, enabled=true, pluginType=AutoscaleMethod >>> [DEBUG] - class='net.imagej.threshold.DefaultThresholdMethod', name='Default', priority=0.0, enabled=true, pluginType=ThresholdMethod >>> [DEBUG] - class='io.scif.img.converters.RandomAccessConverter', name='Default', priority=0.0, enabled=true, pluginType=PlaneConverter >>> [DEBUG] - class='io.scif.formats.EPSFormat', name='Encapsulated PostScript', priority=0.0, enabled=true, pluginType=Format >>> [DEBUG] - class='io.scif.formats.FITSFormat', name='Flexible Image Transport System', priority=0.0, enabled=true, pluginType=Format >>> [DEBUG] - class='io.scif.formats.GIFFormat', name='Graphics Interchange Format', priority=0.0, enabled=true, pluginType=Format >>> [DEBUG] - class='org.scijava.plugins.scripting.groovy.GroovyScriptLanguage', name='Groovy', priority=0.0, enabled=true, pluginType=ScriptLanguage >>> [DEBUG] - class='net.imagej.threshold.HuangThresholdMethod', name='Huang', priority=0.0, enabled=true, pluginType=ThresholdMethod >>> [DEBUG] - class='net.imagej.legacy.plugin.IJ1MacroLanguage', name='IJ1 Macro', priority=0.0, enabled=true, pluginType=ScriptLanguage >>> [DEBUG] - class='io.scif.formats.ICSFormat', name='Image Cytometry Standard', priority=0.0, enabled=true, pluginType=Format >>> [DEBUG] - class='net.imagej.legacy.LegacyImageJApp', name='ImageJ1', priority=0.0, enabled=true, pluginType=App >>> [DEBUG] - class='net.imagej.threshold.IntermodesThresholdMethod', name='Intermodes', priority=0.0, enabled=true, pluginType=ThresholdMethod >>> [DEBUG] - class='net.imagej.threshold.IsoDataThresholdMethod', name='IsoData', priority=0.0, enabled=true, pluginType=ThresholdMethod >>> [DEBUG] - class='io.scif.formats.JPEGFormat', name='JPEG', priority=0.0, enabled=true, pluginType=Format >>> [DEBUG] - class='io.scif.formats.JPEG2000Format', name='JPEG-2000', priority=0.0, enabled=true, pluginType=Format >>> [DEBUG] - class='org.scijava.plugins.scripting.java.JavaScriptLanguage', name='Java', priority=0.0, enabled=true, pluginType=ScriptLanguage >>> [DEBUG] - class='io.scif.formats.JavaFormat', name='Java source code', priority=0.0, enabled=true, pluginType=Format >>> [DEBUG] - class='org.scijava.plugins.scripting.javascript.JavaScriptScriptLanguage', name='JavaScript', priority=0.0, enabled=true, pluginType=ScriptLanguage >>> [DEBUG] - class='net.imagej.threshold.LiThresholdMethod', name='Li', priority=0.0, enabled=true, pluginType=ThresholdMethod >>> [DEBUG] - class='org.scijava.plugins.platforms.macosx.MacOSXPlatform', name='Mac OS X', priority=0.0, enabled=true, pluginType=Platform >>> [DEBUG] - class='net.imagej.threshold.MaxEntropyThresholdMethod', name='MaxEntropy', priority=0.0, enabled=true, pluginType=ThresholdMethod >>> [DEBUG] - class='net.imagej.threshold.MaxLikelihoodThresholdMethod', name='MaxLikelihood', priority=0.0, enabled=true, pluginType=ThresholdMethod >>> [DEBUG] - class='net.imagej.threshold.MeanThresholdMethod', name='Mean', priority=0.0, enabled=true, pluginType=ThresholdMethod >>> [DEBUG] - class='io.scif.formats.MicromanagerFormat', name='Micro-Manager', priority=0.0, enabled=true, pluginType=Format >>> [DEBUG] - class='net.imagej.threshold.MinErrorThresholdMethod', name='MinError(I)', priority=0.0, enabled=true, pluginType=ThresholdMethod >>> [DEBUG] - class='net.imagej.threshold.MinimumThresholdMethod', name='Minimum', priority=0.0, enabled=true, pluginType=ThresholdMethod >>> [DEBUG] - class='net.imagej.threshold.MomentsThresholdMethod', name='Moments', priority=0.0, enabled=true, pluginType=ThresholdMethod >>> [DEBUG] - class='io.scif.formats.MNGFormat', name='Multiple Network Graphics', priority=0.0, enabled=true, pluginType=Format >>> [DEBUG] - class='io.scif.formats.NRRDFormat', name='NRRD', priority=0.0, enabled=true, pluginType=Format >>> [DEBUG] - class='io.scif.formats.OBFFormat', name='OBF', priority=0.0, enabled=true, pluginType=Format >>> [DEBUG] - class='net.imagej.threshold.OtsuThresholdMethod', name='Otsu', priority=0.0, enabled=true, pluginType=ThresholdMethod >>> [DEBUG] - class='io.scif.formats.PCXFormat', name='PCX', priority=0.0, enabled=true, pluginType=Format >>> [DEBUG] - class='io.scif.formats.qt.PICTFormat', name='PICT', priority=0.0, enabled=true, pluginType=Format >>> [DEBUG] - class='net.imagej.plugins.tools.PanActivator', name='Pan Activator', priority=0.0, enabled=true, pluginType=Tool >>> [DEBUG] - class='net.imagej.threshold.PercentileThresholdMethod', name='Percentile', priority=0.0, enabled=true, pluginType=ThresholdMethod >>> [DEBUG] - class='io.scif.img.converters.PlanarAccessConverter', name='PlanarAccess', priority=0.0, enabled=true, pluginType=PlaneConverter >>> [DEBUG] - class='io.scif.formats.PGMFormat', name='Portable Gray Map', priority=0.0, enabled=true, pluginType=Format >>> [DEBUG] - class='net.imagej.plugins.tools.PixelProbe', name='Probe', priority=0.0, enabled=true, pluginType=Tool >>> [DEBUG] - class='org.scijava.plugins.scripting.jython.JythonScriptLanguage', name='Python', priority=0.0, enabled=true, pluginType=ScriptLanguage >>> [DEBUG] - class='io.scif.formats.qt.NativeQTFormat', name='QuickTime', priority=0.0, enabled=true, pluginType=Format >>> [DEBUG] - class='net.imagej.threshold.RenyiEntropyThresholdMethod', name='RenyiEntropy', priority=0.0, enabled=true, pluginType=ThresholdMethod >>> [DEBUG] - class='org.scijava.plugins.scripting.jruby.JRubyScriptLanguage', name='Ruby', priority=0.0, enabled=true, pluginType=ScriptLanguage >>> [DEBUG] - class='io.scif.app.SCIFIOApp', name='SCIFIO', priority=0.0, enabled=true, pluginType=App >>> [DEBUG] - class='net.imagej.threshold.ShanbhagThresholdMethod', name='Shanbhag', priority=0.0, enabled=true, pluginType=ThresholdMethod >>> [DEBUG] - class='io.scif.formats.FakeFormat', name='Simulated data', priority=0.0, enabled=true, pluginType=Format >>> [DEBUG] - class='io.scif.formats.TextFormat', name='Text', priority=0.0, enabled=true, pluginType=Format >>> [DEBUG] - class='net.imagej.threshold.TriangleThresholdMethod', name='Triangle', priority=0.0, enabled=true, pluginType=ThresholdMethod >>> [DEBUG] - class='net.imagej.plugins.tools.FocusHandler', name='Window Focus', priority=0.0, enabled=true, pluginType=Tool >>> [DEBUG] - class='org.scijava.plugins.platforms.windows.WindowsPlatform', name='Windows', priority=0.0, enabled=true, pluginType=Platform >>> [DEBUG] - class='io.scif.formats.BMPFormat', name='Windows Bitmap', priority=0.0, enabled=true, pluginType=Format >>> [DEBUG] - class='net.imagej.threshold.YenThresholdMethod', name='Yen', priority=0.0, enabled=true, pluginType=ThresholdMethod >>> [DEBUG] - class='io.scif.formats.ZipFormat', name='Zip', priority=0.0, enabled=true, pluginType=Format >>> [DEBUG] - class='net.imagej.plugins.tools.ZoomHandler', name='Zoom Shortcuts', priority=0.0, enabled=true, pluginType=Tool >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealAbs', name='abs', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToImageInPlace', name='add', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddRandomAccessibleIntervalToIterableInterval', name='add', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToPlanarDoubleImage', name='add', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealAddConstant', name='addconstant', priority=0.0, enabled=true, pluginType=Op >>> 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class='net.imagej.ops.generated.arithmetic.real.RealArccsch', name='arccsch', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArcsec', name='arcsec', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArcsech', name='arcsech', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArcsin', name='arcsin', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArcsinh', name='arcsinh', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArctan', name='arctan', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArctanh', name='arctanh', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.ascii.DefaultASCII', name='ascii', 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class='net.imagej.ops.generated.arithmetic.real.RealFloor', name='floor', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealGammaConstant', name='gammaconstant', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.gauss.GaussRAI2RAI', name='gauss', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealGaussianRandom', name='gaussianrandom', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.identity.DefaultIdentity', name='identity', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealInvert', name='invert', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinInplaceAndInplace', name='join', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinInplaceAndFunction', name='join', 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class='net.imagej.ops.generated.arithmetic.real.RealLogOnePlusX', name='logoneplusx', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.lookup.DefaultLookup', name='lookup', aliases='op', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.loop.DefaultLoopInplace', name='loop', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.loop.DefaultLoopFunction', name='loop', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.threshold.Manual', name='manualthreshold', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.map.MapRA2View', name='map', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.map.MapRAI2View', name='map', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.map.MapII2View', name='map', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealMaxConstant', name='maxconstant', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealMinConstant', name='minconstant', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.misc.MinMaxRealType', name='minmax', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.statistics.moments.Moment2AboutMean', name='moment1aboutmean', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.statistics.moments.Moment1AboutMean', name='moment1aboutmean', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealMultiplyConstant', name='multiplyconstant', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealNearestInt', name='nearestint', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealNegate', name='negate', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.normalize.NormalizeRealType', name='normalize', aliases='norm', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.normalize.NormalizeII', name='normalize', aliases='norm', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealOrConstant', name='orconstant', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.threshold.Otsu', name='otsu', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealPowerConstant', name='powerconstant', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealReciprocal', name='reciprocal', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealRound', name='round', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.scale.ScaleImg', name='scale', aliases='norm', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSec', name='sec', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSech', name='sech', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSignum', name='signum', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSin', name='sin', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSinc', name='sinc', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSincPi', name='sincpi', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSinh', name='sinh', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSqr', name='sqr', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSqrt', name='sqrt', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealStep', name='step', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSubtractConstant', name='subtractconstant', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='org.scijava.ui.swing.sdi.SwingSDIUI', name='swing', priority=0.0, enabled=true, pluginType=UserInterface >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealTan', name='tan', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealTanh', name='tanh', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.threshold.PixThreshold', name='threshold', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.threshold.GlobalThreshold', name='threshold', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.threshold.LocalThreshold', name='threshold', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealUlp', name='ulp', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealUniformRandom', name='uniformrandom', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealXorConstant', name='xorconstant', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealZero', name='zero', priority=0.0, enabled=true, pluginType=Op >>> [DEBUG] - class='fiji.plugin.trackmate.tracking.ManualTrackerFactory', priority=-1.0, enabled=true, pluginType=SpotTrackerFactory >>> [DEBUG] - class='net.imagej.ops.map.ParallelMap', name='map', priority=-95.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.map.ParallelMapI2I', name='map', priority=-97.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.map.ParallelMapI2R', name='map', priority=-98.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.crop.CropImgPlus', name='crop', aliases='slice', priority=-99.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.crop.CropLabeling', name='crop', aliases='slice', priority=-99.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.map.MapII2II', name='map', priority=-99.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.project.parallel.DefaultProjectP', name='project', priority=-99.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.statistics.StdDevRealTypeDirect', name='stddev', priority=-99.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.statistics.VarianceRealTypeDirect', name='variance', priority=-99.0, enabled=true, pluginType=Op >>> [DEBUG] - class='org.scijava.ui.dnd.FileDragAndDropHandler', priority=-100.0, enabled=true, pluginType=DragAndDropHandler >>> [DEBUG] - class='org.scijava.display.DefaultTextDisplay', priority=-100.0, enabled=true, pluginType=Display >>> [DEBUG] - class='org.scijava.log.StderrLogService', priority=-100.0, enabled=true, pluginType=Service >>> [DEBUG] - class='org.scijava.platform.DefaultAppEventService', priority=-100.0, enabled=true, pluginType=Service >>> [DEBUG] - class='net.imagej.display.DummyScreenCaptureService', priority=-100.0, enabled=true, pluginType=Service >>> [DEBUG] - class='net.imagej.render.DummyRenderingService', priority=-100.0, enabled=true, pluginType=Service >>> [DEBUG] - class='net.imagej.io.DatasetIOPlugin', priority=-100.0, enabled=true, pluginType=IOPlugin >>> [DEBUG] - class='io.scif.formats.APNGFormat$APNGTranslator', priority=-100.0, enabled=true, pluginType=Translator >>> [DEBUG] - class='io.scif.formats.qt.NativeQTFormat$NativeQTTranslator', priority=-100.0, enabled=true, pluginType=Translator >>> [DEBUG] - class='io.scif.formats.FakeFormat$FakeTranslator', priority=-100.0, enabled=true, pluginType=Translator >>> [DEBUG] - class='io.scif.formats.MicromanagerFormat$MicromanagerTranslator', priority=-100.0, enabled=true, pluginType=Translator >>> [DEBUG] - class='io.scif.services.DefaultInitializeService', priority=-100.0, enabled=true, pluginType=Service >>> [DEBUG] - class='io.scif.formats.AVIFormat$Translator', priority=-100.0, enabled=true, pluginType=Translator >>> [DEBUG] - class='io.scif.formats.ICSFormat$ICSTranslator', priority=-100.0, enabled=true, pluginType=Translator >>> [DEBUG] - class='io.scif.formats.EPSFormat$EPSTranslator', priority=-100.0, enabled=true, pluginType=Translator >>> [DEBUG] - class='io.scif.formats.ImageIOFormat$ImageIOTranslator', priority=-100.0, enabled=true, pluginType=Translator >>> [DEBUG] - class='io.scif.formats.qt.LegacyQTFormat$LegacyQTTranslator', priority=-100.0, enabled=true, pluginType=Translator >>> [DEBUG] - class='net.imagej.legacy.plugin.DefaultLegacyOpener', priority=-100.0, enabled=true, pluginType=LegacyOpener >>> [DEBUG] - class='net.imagej.legacy.plugin.DefaultLegacyEditor', priority=-100.0, enabled=true, pluginType=LegacyEditor >>> [DEBUG] - class='org.scijava.plugins.scripting.java.MainJavaRunner', priority=-100.0, enabled=true, pluginType=JavaRunner >>> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat$OMEXMLTranslator', priority=-100.0, enabled=true, pluginType=Translator >>> [DEBUG] - class='io.scif.formats.qt.LegacyQTFormat', name='QuickTime', priority=-100.0, enabled=true, pluginType=Format >>> [DEBUG] - class='org.scijava.app.SciJavaApp', name='SciJava', priority=-100.0, enabled=true, pluginType=App >>> [DEBUG] - class='io.scif.formats.JPEGTileFormat', name='Tile JPEG', priority=-100.0, enabled=true, pluginType=Format >>> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToNumericType', name='add', priority=-100.0, enabled=true, pluginType=Op >>> [DEBUG] - class='org.scijava.ui.awt.AWTUI', name='awt', priority=-100.0, enabled=true, pluginType=UserInterface >>> [DEBUG] - class='net.imagej.ops.crop.CropRAI', name='crop', aliases='slice', priority=-100.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.map.MapII2RAI', name='map', priority=-100.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.map.MapRAI2III', name='map', priority=-100.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.map.MapI', name='map', priority=-100.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.neighborhood.MapNeighborhood', name='map', priority=-100.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.statistics.MaxRealType', name='max', priority=-100.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.statistics.MeanRealType', name='mean', priority=-100.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.statistics.MedianRealType', name='median', priority=-100.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.statistics.MinRealType', name='min', priority=-100.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.project.ProjectRAI2II', name='project', priority=-100.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.misc.SizeIterableInterval', name='size', priority=-100.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.statistics.StdDevRealType', name='stddev', priority=-100.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.statistics.SumRealType', name='sum', priority=-100.0, enabled=true, pluginType=Op >>> [DEBUG] - class='org.scijava.ui.swing.mdi.SwingMdiUI', name='swing-mdi', priority=-100.0, enabled=true, pluginType=UserInterface >>> [DEBUG] - class='net.imagej.ops.statistics.VarianceRealType', name='variance', priority=-100.0, enabled=true, pluginType=Op >>> [DEBUG] - class='org.scijava.text.io.TextIOPlugin', priority=-101.0, enabled=true, pluginType=IOPlugin >>> [DEBUG] - class='net.imagej.ops.map.MapI2I', name='map', priority=-101.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.plugins.tools.WandTool', name='Wand', description='Wand (tracing) tool', iconPath='/icons/tools/wand.png', priority=-110.0, enabled=false, pluginType=Tool >>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingTextTool', name='Text', description='Text tool', iconPath='/icons/tools/text.png', priority=-115.0, enabled=false, pluginType=Tool >>> [DEBUG] - class='net.imagej.plugins.tools.ZoomTool', name='Zoom', description='Magnifying glass (or use "+" and "-" keys)', iconPath='/icons/tools/zoom.png', priority=-200.0, enabled=true, pluginType=Tool >>> [DEBUG] - class='net.imagej.plugins.tools.PanTool', name='Pan', description='Scrolling tool (or press space bar and drag)', iconPath='/icons/tools/pan.png', priority=-201.0, enabled=true, pluginType=Tool >>> [DEBUG] - class='net.imagej.plugins.tools.PaintBrushTool', name='Paintbrush', description='Paintbrush Tool', iconPath='/icons/tools/paintbrush.png', priority=-300.0, enabled=true, pluginType=Tool >>> [DEBUG] - class='net.imagej.plugins.tools.PencilTool', name='Pencil', description='Pencil Tool', iconPath='/icons/tools/pencil.png', priority=-301.0, enabled=true, pluginType=Tool >>> [DEBUG] - class='net.imagej.plugins.tools.SprayCanTool', name='SprayCan', label='Spray Can', description='Spray Can Tool', iconPath='/icons/tools/spray-can.png', priority=-303.0, enabled=true, pluginType=Tool >>> [DEBUG] - class='net.imagej.plugins.tools.FloodFillTool', name='FloodFill', label='Flood Fill', description='Flood Fill Tool', iconPath='/icons/tools/flood-fill.png', priority=-304.0, enabled=true, pluginType=Tool >>> [DEBUG] - class='net.imagej.plugins.tools.ArrowTool', name='Arrow', description='Arrow Tool', iconPath='/icons/tools/arrow.png', priority=-305.0, enabled=false, pluginType=Tool >>> [DEBUG] - class='net.imagej.plugins.tools.FgColorTool', name='Foreground', iconPath='/icons/tools/blank.png', priority=-500.0, enabled=true, pluginType=Tool >>> [DEBUG] - class='net.imagej.plugins.tools.BgColorTool', name='Background', iconPath='/icons/tools/blankBlack.png', priority=-501.0, enabled=true, pluginType=Tool >>> [DEBUG] - class='io.scif.ome.formats.OMETIFFFormat', priority=-9998.0, enabled=true, pluginType=Format >>> [DEBUG] - class='io.scif.ome.formats.OMETIFFFormat$OMETIFFTranslator', priority=-9998.0, enabled=true, pluginType=Translator >>> [DEBUG] - class='org.scijava.module.process.LoadInputsPreprocessor', priority=-9999.0, enabled=true, pluginType=PreprocessorPlugin >>> [DEBUG] - class='io.scif.formats.TIFFFormat$TIFFTranslator', priority=-9999.0, enabled=true, pluginType=Translator >>> [DEBUG] - class='io.scif.formats.TIFFFormat', name='Tagged Image File Format', priority=-9999.0, enabled=true, pluginType=Format >>> [DEBUG] - class='org.scijava.ui.FilePreprocessor', priority=-9999.5, enabled=true, pluginType=PreprocessorPlugin >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin >>> [DEBUG] - class='org.scijava.plugins.text.plain.PlainTextFormat', priority=-10000.0, enabled=true, pluginType=TextFormat >>> [DEBUG] - class='org.scijava.display.DisplayPostprocessor', priority=-10000.0, enabled=true, pluginType=PostprocessorPlugin >>> [DEBUG] - class='io.scif.DefaultTranslator', priority=-10000.0, enabled=true, pluginType=Translator >>> [DEBUG] - class='net.imagej.legacy.ui.LegacyInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingMdiInputHarvester', priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin >>> [DEBUG] - class='net.imagej.ui.swing.overlay.DefaultJHotDrawAdapter', priority=-10000.0, enabled=true, pluginType=JHotDrawAdapter >>> [DEBUG] - class='org.scijava.platform.DefaultPlatform', name='Default', priority=-10000.0, enabled=true, pluginType=Platform >>> [DEBUG] - class='net.imagej.plugins.tools.AcceleratorHandler', name='Keyboard Shortcuts', priority=-10000.0, enabled=true, pluginType=Tool >>> [DEBUG] - class='io.scif.formats.MinimalTIFFFormat', name='Minimal TIFF', priority=-10000.0, enabled=true, pluginType=Format >>> [DEBUG] - class='net.imagej.ops.arithmetic.add.AddConstantToImageFunctional', name='add', priority=-10000.0, enabled=true, pluginType=Op >>> [DEBUG] - class='net.imagej.ops.chunker.InterleavedChunker', name='chunker', priority=-10000.0, enabled=true, pluginType=Op >>> [DEBUG] - class='org.scijava.module.process.CheckInputsPreprocessor', priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin >>> [DEBUG] - class='org.scijava.module.process.SaveInputsPreprocessor', priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin >>> [DEBUG] - class='io.scif.formats.TIFFJAIFormat', name='Tagged Image File Format', priority=-10001.0, enabled=true, pluginType=Format >>> [DEBUG] - class='net.imagej.ops.misc.SizeIterable', name='size', priority=-Infinity, enabled=true, pluginType=Op >>> [DEBUG] Created service 'org.scijava.plugin.DefaultPluginService' in 51 ms >>> [DEBUG] Creating service: org.scijava.object.DefaultObjectService >>> log4j:WARN No appenders could be found for logger (org.bushe.swing.event.EventService). >>> log4j:WARN Please initialize the log4j system properly. >>> log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info. >>> [DEBUG] Created service 'org.scijava.object.DefaultObjectService' in 72 ms >>> [DEBUG] Creating service: org.scijava.module.DefaultModuleService >>> [DEBUG] Creating service: org.scijava.prefs.DefaultPrefService >>> [DEBUG] Created service 'org.scijava.prefs.DefaultPrefService' in 4 ms >>> [DEBUG] Creating service: org.scijava.convert.DefaultConvertService >>> [DEBUG] Created service 'org.scijava.convert.DefaultConvertService' in 4 ms >>> [DEBUG] Created service 'org.scijava.module.DefaultModuleService' in 14 ms >>> [DEBUG] Creating service: org.scijava.command.DefaultCommandService >>> [DEBUG] Created service 'org.scijava.command.DefaultCommandService' in 36 ms >>> [DEBUG] Created service 'org.scijava.script.DefaultScriptService' in 184 ms >>> [DEBUG] Creating service: net.imagej.lut.DefaultLUTService >>> [DEBUG] Creating service: net.imagej.DefaultDatasetService >>> [DEBUG] Creating service: io.scif.services.DefaultFormatService >>> [DEBUG] Created service 'io.scif.services.DefaultFormatService' in 3 ms >>> [DEBUG] Creating service: net.imagej.types.DefaultDataTypeService >>> [INFO] Found 11 DataType plugins. >>> [DEBUG] Created service 'net.imagej.types.DefaultDataTypeService' in 40 ms >>> [DEBUG] Created service 'net.imagej.DefaultDatasetService' in 61 ms >>> [DEBUG] Creating service: org.scijava.display.DefaultDisplayService >>> [DEBUG] Created service 'org.scijava.display.DefaultDisplayService' in 5 ms >>> [DEBUG] Creating service: net.imagej.display.DefaultImageDisplayService >>> [DEBUG] Created service 'net.imagej.display.DefaultImageDisplayService' in 3 ms >>> [DEBUG] Created service 'net.imagej.lut.DefaultLUTService' in 74 ms >>> [DEBUG] Creating service: net.imagej.legacy.DefaultLegacyService >>> [DEBUG] Creating service: net.imagej.display.DefaultOverlayService >>> [DEBUG] Creating service: org.scijava.options.DefaultOptionsService >>> [DEBUG] Created service 'org.scijava.options.DefaultOptionsService' in 2 ms >>> [DEBUG] Creating service: net.imagej.ui.awt.AWTRenderingService >>> [DEBUG] Created service 'net.imagej.ui.awt.AWTRenderingService' in 1 ms >>> [DEBUG] Created service 'net.imagej.display.DefaultOverlayService' in 10 ms >>> [DEBUG] Creating service: net.imagej.threshold.DefaultThresholdService >>> [DEBUG] Created service 'net.imagej.threshold.DefaultThresholdService' in 4 ms >>> [DEBUG] Creating service: org.scijava.menu.DefaultMenuService >>> [DEBUG] Created service 'org.scijava.menu.DefaultMenuService' in 3 ms >>> [DEBUG] Creating service: org.scijava.app.DefaultStatusService >>> [DEBUG] Creating service: org.scijava.app.DefaultAppService >>> [DEBUG] Created service 'org.scijava.app.DefaultAppService' in 4 ms >>> [DEBUG] Created service 'org.scijava.app.DefaultStatusService' in 5 ms >>> [INFO] Found 8 ScriptLanguage plugins. >>> [INFO] Found 0 scripts >>> [INFO] Overriding Upload Sample Image; identifier: command:net.imagej.plugins.commands.upload.SampleImageUploader; jar: file:/opt/Fiji.app/jars/imagej-plugins-commands-0.2.6.jar >>> [INFO] Overriding Test FlowCam; identifier: script:/opt/Fiji.app/plugins/FlowCam/Test_FlowCam.ijm; jar: file:/opt/Fiji.app/jars/scijava-common-2.33.0.jar >>> [DEBUG] Created service 'net.imagej.legacy.DefaultLegacyService' in 685 ms >>> [DEBUG] Creating service: fiji.DefaultFijiService >>> [DEBUG] Created service 'fiji.DefaultFijiService' in 1 ms >>> [DEBUG] Creating service: net.imglib2.meta.units.DefaultUnitService >>> [DEBUG] Created service 'net.imglib2.meta.units.DefaultUnitService' in 44 ms >>> [DEBUG] Creating service: net.imagej.ui.awt.AWTScreenCaptureService >>> [DEBUG] Created service 'net.imagej.ui.awt.AWTScreenCaptureService' in 2 ms >>> [DEBUG] Creating service: org.scijava.input.DefaultInputService >>> [DEBUG] Created service 'org.scijava.input.DefaultInputService' in 6 ms >>> [DEBUG] Creating service: org.scijava.ui.DefaultUIService >>> [DEBUG] Creating service: org.scijava.platform.DefaultPlatformService >>> [DEBUG] Creating service: org.scijava.platform.DefaultAppEventService >>> [DEBUG] Created service 'org.scijava.platform.DefaultAppEventService' in 2 ms >>> [INFO] Found 1 Platform plugins. >>> [DEBUG] Configuring platform: org.scijava.platform.DefaultPlatform >>> [DEBUG] Created service 'org.scijava.platform.DefaultPlatformService' in 11 ms >>> [DEBUG] Creating service: org.scijava.tool.DefaultToolService >>> [DEBUG] Created service 'org.scijava.tool.DefaultToolService' in 5 ms >>> [DEBUG] Created service 'org.scijava.ui.DefaultUIService' in 23 ms >>> [DEBUG] Creating service: org.scijava.ui.dnd.DefaultDragAndDropService >>> [DEBUG] Created service 'org.scijava.ui.dnd.DefaultDragAndDropService' in 5 ms >>> [DEBUG] Creating service: org.scijava.text.DefaultTextService >>> [DEBUG] Created service 'org.scijava.text.DefaultTextService' in 3 ms >>> [DEBUG] Creating service: org.scijava.io.DefaultRecentFileService >>> [DEBUG] Created service 'org.scijava.io.DefaultRecentFileService' in 61 ms >>> [DEBUG] Creating service: org.scijava.io.DefaultIOService >>> [DEBUG] Created service 'org.scijava.io.DefaultIOService' in 4 ms >>> [DEBUG] Creating service: org.scijava.widget.DefaultWidgetService >>> [INFO] Found 22 InputWidget plugins. >>> [DEBUG] Created service 'org.scijava.widget.DefaultWidgetService' in 6 ms >>> [DEBUG] Creating service: org.scijava.welcome.DefaultWelcomeService >>> [DEBUG] Created service 'org.scijava.welcome.DefaultWelcomeService' in 2 ms >>> [DEBUG] Creating service: org.scijava.script.DefaultScriptHeaderService >>> [DEBUG] Created service 'org.scijava.script.DefaultScriptHeaderService' in 2 ms >>> [DEBUG] Creating service: org.scijava.event.DefaultEventHistory >>> [DEBUG] Created service 'org.scijava.event.DefaultEventHistory' in 2 ms >>> [DEBUG] Creating service: org.scijava.console.DefaultConsoleService >>> [DEBUG] Created service 'org.scijava.console.DefaultConsoleService' in 2 ms >>> [DEBUG] Creating service: net.imagej.operator.DefaultCalculatorService >>> [DEBUG] Created service 'net.imagej.operator.DefaultCalculatorService' in 2 ms >>> [DEBUG] Creating service: net.imagej.autoscale.DefaultAutoscaleService >>> [DEBUG] Created service 'net.imagej.autoscale.DefaultAutoscaleService' in 3 ms >>> [DEBUG] Creating service: net.imagej.sampler.DefaultSamplerService >>> [DEBUG] Created service 'net.imagej.sampler.DefaultSamplerService' in 3 ms >>> [DEBUG] Creating service: net.imagej.display.DefaultZoomService >>> [DEBUG] Created service 'net.imagej.display.DefaultZoomService' in 2 ms >>> [DEBUG] Creating service: net.imagej.display.DefaultWindowService >>> [DEBUG] Created service 'net.imagej.display.DefaultWindowService' in 2 ms >>> [DEBUG] Creating service: net.imagej.DefaultImgPlusService >>> [DEBUG] Created service 'net.imagej.DefaultImgPlusService' in 1 ms >>> [DEBUG] Creating service: net.imagej.ui.DefaultImageJUIService >>> [DEBUG] Created service 'net.imagej.ui.DefaultImageJUIService' in 1 ms >>> [DEBUG] Creating service: net.imagej.measure.DefaultStatisticsService >>> [DEBUG] Created service 'net.imagej.measure.DefaultStatisticsService' in 3 ms >>> [DEBUG] Creating service: net.imagej.measure.DefaultMeasurementService >>> [DEBUG] Created service 'net.imagej.measure.DefaultMeasurementService' in 1 ms >>> [DEBUG] Creating service: net.imagej.animation.DefaultAnimationService >>> [DEBUG] Created service 'net.imagej.animation.DefaultAnimationService' in 4 ms >>> [DEBUG] Creating service: io.scif.io.DefaultNIOService >>> [DEBUG] Created service 'io.scif.io.DefaultNIOService' in 2 ms >>> [DEBUG] Creating service: io.scif.img.converters.DefaultPlaneConverterService >>> [DEBUG] Created service 'io.scif.img.converters.DefaultPlaneConverterService' in 6 ms >>> [DEBUG] Creating service: io.scif.img.DefaultImgUtilityService >>> [DEBUG] Created service 'io.scif.img.DefaultImgUtilityService' in 5 ms >>> [DEBUG] Creating service: io.scif.gui.DefaultGUIService >>> [DEBUG] Created service 'io.scif.gui.DefaultGUIService' in 3 ms >>> [DEBUG] Creating service: io.scif.xml.DefaultXMLService >>> [DEBUG] Created service 'io.scif.xml.DefaultXMLService' in 22 ms >>> [DEBUG] Creating service: io.scif.refs.DefaultRefManagerService >>> [DEBUG] Created service 'io.scif.refs.DefaultRefManagerService' in 1 ms >>> [DEBUG] Creating service: io.scif.services.DefaultTranslatorService >>> [DEBUG] Created service 'io.scif.services.DefaultTranslatorService' in 2 ms >>> [DEBUG] Creating service: io.scif.codec.DefaultCodecService >>> [DEBUG] Created service 'io.scif.codec.DefaultCodecService' in 1 ms >>> [DEBUG] Creating service: io.scif.img.cell.cache.MapDBCache >>> [DEBUG] Created service 'io.scif.img.cell.cache.MapDBCache' in 8 ms >>> [DEBUG] Creating service: io.scif.DefaultMetadataService >>> [DEBUG] Created service 'io.scif.DefaultMetadataService' in 0 ms >>> [DEBUG] Creating service: io.scif.services.DefaultFilePatternService >>> [DEBUG] Created service 'io.scif.services.DefaultFilePatternService' in 2 ms >>> [DEBUG] Creating service: io.scif.formats.tiff.DefaultTiffService >>> [DEBUG] Created service 'io.scif.formats.tiff.DefaultTiffService' in 3 ms >>> [DEBUG] Creating service: io.scif.services.DefaultLocationService >>> [DEBUG] Created service 'io.scif.services.DefaultLocationService' in 1 ms >>> [DEBUG] Creating service: io.scif.services.JAIIIOServiceImpl >>> [DEBUG] Created service 'io.scif.services.JAIIIOServiceImpl' in 24 ms >>> [DEBUG] Creating service: io.scif.formats.qt.DefaultQTJavaService >>> [DEBUG] Created service 'io.scif.formats.qt.DefaultQTJavaService' in 5 ms >>> [DEBUG] Creating service: org.scijava.ui.swing.SwingIconService >>> [DEBUG] Created service 'org.scijava.ui.swing.SwingIconService' in 3 ms >>> [DEBUG] Creating service: org.scijava.plugins.scripting.java.DefaultJavaService >>> [DEBUG] Created service 'org.scijava.plugins.scripting.java.DefaultJavaService' in 2 ms >>> [DEBUG] Creating service: net.imagej.ui.swing.overlay.JHotDrawService >>> [DEBUG] Created service 'net.imagej.ui.swing.overlay.JHotDrawService' in 3 ms >>> [DEBUG] Creating service: net.imagej.updater.DefaultUpdateService >>> [DEBUG] Created service 'net.imagej.updater.DefaultUpdateService' in 7 ms >>> [DEBUG] Creating service: net.imagej.updater.DefaultUploaderService >>> [DEBUG] Created service 'net.imagej.updater.DefaultUploaderService' in 1 ms >>> [DEBUG] Creating service: net.imagej.ops.DefaultOpService >>> [DEBUG] Creating service: net.imagej.ops.DefaultOpMatchingService >>> [DEBUG] Created service 'net.imagej.ops.DefaultOpMatchingService' in 2 ms >>> [DEBUG] Created service 'net.imagej.ops.DefaultOpService' in 5 ms >>> [DEBUG] Creating service: net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor >>> [DEBUG] Created service 'net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor' in 1 ms >>> [DEBUG] Creating service: io.scif.ome.services.DefaultOMEXMLService >>> [DEBUG] Created service 'io.scif.ome.services.DefaultOMEXMLService' in 30 ms >>> [DEBUG] Creating service: io.scif.ome.services.DefaultOMEMetadataService >>> [DEBUG] Created service 'io.scif.ome.services.DefaultOMEMetadataService' in 11 ms >>> [DEBUG] Creating service: net.imagej.display.DummyScreenCaptureService >>> [DEBUG] Created service 'net.imagej.display.DummyScreenCaptureService' in 0 ms >>> [DEBUG] Creating service: net.imagej.render.DummyRenderingService >>> [DEBUG] Created service 'net.imagej.render.DummyRenderingService' in 1 ms >>> [DEBUG] Creating service: io.scif.services.DefaultInitializeService >>> [DEBUG] Created service 'io.scif.services.DefaultInitializeService' in 3 ms >>> [DEBUG] Received command line arguments: >>> [DEBUG] publish( >>> context = org.scijava.Context@7c92eb86 >>> consumed = false,null,null), called from non-EDT Thread:null >>> [DEBUG] -port7 >>> [DEBUG] -macro >>> [DEBUG] /home/btupper/hello.ijm >>> [DEBUG] -batch >>> [INFO] Found 11 ConsoleArgument plugins. >>> [ERROR] Skipping unsupported option -port7 >>> [DEBUG] publish( >>> context = org.scijava.Context@7c92eb86 >>> consumed = false,null,null), called from non-EDT Thread:null >>> [INFO] Discovered user interface: net.imagej.legacy.ui.LegacyUI >>> [INFO] Discovered user interface: org.scijava.ui.swing.sdi.SwingSDIUI >>> [INFO] Discovered user interface: org.scijava.ui.awt.AWTUI >>> [INFO] Discovered user interface: org.scijava.ui.swing.mdi.SwingMdiUI >>> [btupper@fcm-flow ~]$ >> >> -- >> ImageJ mailing list: http://imagej.nih.gov/ij/list.html > -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html |
Hi Ben,
Some additional information on these messages: >log4j:WARN No appenders could be found for logger (org.bushe.swing.event.EventService). These log4j warnings come up because, although there is a log4j.jar, there is no log4j.properties shipped with Fiji by default right now. We have decided to fix that by creating a new SciJava-config component <https://github.com/scijava/scijava-config> to bundle configuration files e.g. for log4j - so eventually these warnings will go away. To my knowledge, the warnings just indicate that you won't see log statements emitted by the EventService class in particular. >[ERROR] Skipping unsupported option -port7 There is an issue open <https://github.com/imagej/imagej/issues/98> tracking this error. It should only be an actual problem if you will rely on the SingleInstanceListener functionality, restricting Fiji to one instance open at a time - otherwise I don't think it will affect you. If it does become a problem though, adding your feedback to that issue would be very helpful! Best, Mark On Tue, Dec 16, 2014 at 9:05 PM, Ben Tupper <[hidden email]> wrote: > On Dec 16, 2014, at 9:43 PM, Ben Tupper <[hidden email]> wrote: > > > > > On Dec 16, 2014, at 7:19 PM, Rasband, Wayne (NIH/NIMH) [E] < > [hidden email]> wrote: > > > >> On Dec 16, 2014, at 3:11 PM, Ben Tupper <[hidden email]> wrote: > >>> > >>> Hello, > >>> > >>> I'm learning to use Fiji in a headless CentOS 6 environment. I first > updated fiji using... > >>> > >>> $ fiji --update update > >>> > >>> > >>> I have a simple macro, '~/hello.ijm', adapted from this one... > http://rsb.info.nih.gov/ij/macros/SaveTextFileDemo.txt > >>> > >>> // > >>> //START ~/hello.ijm > >>> // > >>> f = File.open("/home/btupper/hello.txt"); > >>> // use d2s() function (double to string) to specify decimal places > >>> for (i=0; i<=2*PI; i+=0.01) > >>> print(f, d2s(i,6) + " \t" + d2s(sin(i),6) + " \t" + d2s(cos(i),6)); > >>> // > >>> //FINISH ~/hello.ijm > >>> // > >>> > >>> I then run the macro from the command line. The macro successfully > creates and populates the '~/hello.txt' file. However, I get log4j > warnings and an error as shown below. (Note, I have pasted in below the > entire output when I set the --debug flag.) > >> > >> You should report this bug using Fiji’s Help>Report a Bug command. The > bug report will automatically provide more information about your setup and > it will help the Fiji developers keep track of your bug report so that it > is not forgotten. http://imagej.net/Bugs > >> > > > It appears that this is identical to an existing bug report: > http://fiji.sc/bugzilla/show_bug.cgi?id=961 > > I have been away from ImageJ for so long - I am astounded by the changes > and still a bit lost. > > Cheers, > Ben > > > > > > >> -wayne > >> > >>> [btupper@fcm-flow ~]$ fiji --headless -macro /home/btupper/hello.ijm > >>> log4j:WARN No appenders could be found for logger > (org.bushe.swing.event.EventService). > >>> log4j:WARN Please initialize the log4j system properly. > >>> log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig > for more info. > >>> [ERROR] Skipping unsupported option -port7 > >>> > >>> Here is a bit more info about the Fiji installation. > >>> > >>> [btupper@fcm-flow ~]$ fiji --print-java-home > >>> /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24/ > >>> [btupper@fcm-flow ~]$ fiji --print-ij-dir > >>> /opt/Fiji.app > >>> > >>> > >>> Do I need to worry about the warnings? I can't locate any > instructions for initializing log4j on the Fiji website. I have found > these 3rd party instructions [ > http://www.javabeat.net/baisc-steps-to-configure-log4j-using-xml-and-properties-file/ > ] but I have no idea if the are appropriate for what Fiji requires. > >>> > >>> I also have no idea how to resolve the error. > >>> > > > > Ah - will do. I assumed that it was something in my own setup - I just > noticed that log4j is distributed with Fiji in the Fiji/jars subdirectory. > > > > > >>> Any suggestions? > >>> > >>> Thanks! > >>> Ben > >>> > >>> > >>> P.S. Below is the command and output with --debug set > >>> > >>> [btupper@fcm-flow ~]$ fiji --debug --headless -macro > /home/btupper/hello.ijm > >>> Available RAM: 3727MB, using 3/4 of that: 2796MB > >>> JRE not found in '/opt/Fiji.app/jre' > >>> JAVA_HOME contains a JRE: > '/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre' > >>> Re-executing with correct library lookup path > (/opt/Fiji.app/lib/linux64:/opt/Fiji.app/mm/linux64) > >>> Available RAM: 3727MB, using 3/4 of that: 2796MB > >>> JRE not found in '/opt/Fiji.app/jre' > >>> JAVA_HOME contains a JRE: > '/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre' > >>> Appending missing -batch flag for headless operation. > >>> java -Dpython.cachedir.skip=true -Dplugins.dir=/opt/Fiji.app -Xmx2796m > -Djava.awt.headless=true -Dapple.awt.UIElement=true -Xincgc > -XX:PermSize=128m -Dsun.java.command=ImageJ > -Djava.class.path=/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar > -Dimagej.dir=/opt/Fiji.app -Dij.dir=/opt/Fiji.app -Dfiji.dir=/opt/Fiji.app > -Dfiji.defaultLibPath=lib/amd64/server/libjvm.so > -Dfiji.executable=/opt/Fiji.app/fiji-linux64 > -Dij.executable=/opt/Fiji.app/fiji-linux64 > -Djava.library.path=/opt/Fiji.app/lib/linux64:/opt/Fiji.app/mm/linux64 > -Dij.debug=true -Dscijava.log.level=debug net.imagej.launcher.ClassLauncher > -classpath /opt/Fiji.app/jars/ij-1.49m.jar fiji.Main -port7 -macro > /home/btupper/hello.ijm -batch > >>> Using JAVA_HOME /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre > >>> Opening Java library > /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre/lib/amd64/server/libjvm.so > >>> Adding option: -Djava.home=/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24/ > >>> Launching main class fiji.Main with parameters [-port7, -macro, > /home/btupper/hello.ijm, -batch] > >>> Class loader = sun.misc.Launcher$AppClassLoader@b92d342 > >>> ij1.plugin.dirs: null > >>> $HOME/.plugins: /home/btupper/.plugins does not exist > >>> Launching main class net.imagej.Main with parameters [-port7, -macro, > /home/btupper/hello.ijm, -batch] > >>> Class loader = sun.misc.Launcher$AppClassLoader@b92d342 > >>> Checking class loader: sun.misc.Launcher$AppClassLoader@b92d342 > >>> Checking URL: file:/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar > >>> Not Eclipse because first entry is: > file:/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar > >>> [DEBUG] Creating service: org.scijava.event.DefaultEventService > >>> [DEBUG] Creating service: org.scijava.log.StderrLogService > >>> [DEBUG] Created service 'org.scijava.log.StderrLogService' in 2 ms > >>> [DEBUG] Creating service: org.scijava.thread.DefaultThreadService > >>> [DEBUG] Created service 'org.scijava.thread.DefaultThreadService' in 1 > ms > >>> [DEBUG] Created service 'org.scijava.event.DefaultEventService' in 47 > ms > >>> [DEBUG] Creating service: org.scijava.script.DefaultScriptService > >>> [DEBUG] Creating service: org.scijava.plugin.DefaultPluginService > >>> [INFO] Found 777 plugins. > >>> [DEBUG] - class='org.scijava.module.process.DebugPreprocessor', > priority=Infinity, enabled=true, pluginType=PreprocessorPlugin > >>> [DEBUG] - class='org.scijava.module.process.DebugPostprocessor', > priority=Infinity, enabled=true, pluginType=PostprocessorPlugin > >>> [DEBUG] - class='net.imagej.plugins.tools.KonamiHandler', > name='Konami', priority=Infinity, enabled=true, pluginType=Tool > >>> [DEBUG] - class='org.scijava.event.DefaultEventService', > priority=100000.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.module.process.ValidityPreprocessor', > priority=10001.0, enabled=true, pluginType=PreprocessorPlugin > >>> [DEBUG] - class='org.scijava.ui.UIPreprocessor', priority=10000.0, > enabled=true, pluginType=PreprocessorPlugin > >>> [DEBUG] - class='org.scijava.display.ActiveDisplayPreprocessor', > priority=10000.0, enabled=true, pluginType=PreprocessorPlugin > >>> [DEBUG] - class='org.scijava.module.process.GatewayPreprocessor', > priority=10000.0, enabled=true, pluginType=PreprocessorPlugin > >>> [DEBUG] - class='org.scijava.module.process.ServicePreprocessor', > priority=10000.0, enabled=true, pluginType=PreprocessorPlugin > >>> [DEBUG] - class='net.imagej.display.ActiveImagePreprocessor', > priority=10000.0, enabled=true, pluginType=PreprocessorPlugin > >>> [DEBUG] - > class='net.imagej.legacy.plugin.ActiveImagePlusPreprocessor', > priority=10000.0, enabled=true, pluginType=PreprocessorPlugin > >>> [DEBUG] - class='io.scif.bf.BioFormatsFormat', name='Bio-Formats > Compatibility Format', priority=10000.0, enabled=true, pluginType=Format > >>> [DEBUG] - class='net.imagej.ops.slicer.SlicewiseRAI2RAI', > name='slicemapper', priority=10000.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.arithmetic.add.parallel.AddConstantToArrayDoubleImageP', > name='add', priority=111.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.arithmetic.add.parallel.AddConstantToArrayByteImageP', > name='add', priority=110.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='io.scif.ome.translators.OMETIFFTranslator$OMEtoOMETIFFTranslator', > priority=101.0, enabled=true, pluginType=ToOMETranslator > >>> [DEBUG] - > class='io.scif.ome.translators.OMETIFFTranslator$OMETIFFtoOMETranslator', > priority=101.0, enabled=true, pluginType=FromOMETranslator > >>> [DEBUG] - > class='io.scif.bf.ome.BioFormatsTranslator$BioFormatsOMETranslator', > priority=101.0, enabled=true, pluginType=ToOMETranslator > >>> [DEBUG] - class='net.imagej.app.ToplevelImageJApp', name='ImageJ', > priority=101.0, enabled=true, pluginType=App > >>> [DEBUG] - > class='net.imagej.ops.arithmetic.add.AddConstantToArrayDoubleImage', > name='add', priority=101.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTMessageWidget', > priority=100.0, enabled=true, pluginType=InputWidget > >>> [DEBUG] - class='org.scijava.module.process.InitPreprocessor', > priority=100.0, enabled=true, pluginType=PreprocessorPlugin > >>> [DEBUG] - class='org.scijava.script.DefaultScriptService', > priority=100.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.lut.DefaultLUTService', priority=100.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.legacy.display.LegacyImageDisplayViewer', > priority=100.0, enabled=true, pluginType=DisplayViewer > >>> [DEBUG] - class='net.imagej.legacy.display.LegacyTextDisplayViewer', > priority=100.0, enabled=true, pluginType=DisplayViewer > >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingMessageWidget', > priority=100.0, enabled=true, pluginType=InputWidget > >>> [DEBUG] - > class='net.imagej.ui.swing.overlay.RectangleJHotDrawAdapter', > priority=100.0, enabled=true, pluginType=JHotDrawAdapter > >>> [DEBUG] - > class='net.imagej.ui.swing.overlay.ThresholdJHotDrawAdapter', > priority=100.0, enabled=true, pluginType=JHotDrawAdapter > >>> [DEBUG] - > class='io.scif.ome.translators.BMPTranslator$BMPOMETranslator', > priority=100.0, enabled=true, pluginType=ToOMETranslator > >>> [DEBUG] - > class='io.scif.ome.translators.MicromanagerTranslator$MicromanagerOMETranslator', > priority=100.0, enabled=true, pluginType=FromOMETranslator > >>> [DEBUG] - > class='io.scif.ome.translators.OBFTranslator$OBFOMETranslator', > priority=100.0, enabled=true, pluginType=ToOMETranslator > >>> [DEBUG] - > class='io.scif.ome.translators.TIFFTranslator$TIFFOMETranslator', > priority=100.0, enabled=true, pluginType=ToOMETranslator > >>> [DEBUG] - > class='io.scif.ome.translators.TIFFTranslator$OMETIFFTranslator', > priority=100.0, enabled=true, pluginType=FromOMETranslator > >>> [DEBUG] - > class='io.scif.ome.translators.APNGTranslator$OMEAPNGTranslator', > priority=100.0, enabled=true, pluginType=FromOMETranslator > >>> [DEBUG] - > class='io.scif.ome.translators.APNGTranslator$APNGOMETranslator', > priority=100.0, enabled=true, pluginType=ToOMETranslator > >>> [DEBUG] - > class='io.scif.ome.translators.ICSTranslator$OMEICSTranslator', > priority=100.0, enabled=true, pluginType=FromOMETranslator > >>> [DEBUG] - > class='io.scif.ome.translators.ICSTranslator$ICSOMETranslator', > priority=100.0, enabled=true, pluginType=ToOMETranslator > >>> [DEBUG] - > class='io.scif.ome.translators.DICOMTranslator$DICOMOMETranslator', > priority=100.0, enabled=true, pluginType=ToOMETranslator > >>> [DEBUG] - > class='io.scif.ome.translators.NRRDTranslator$NRRDOMETranslator', > priority=100.0, enabled=true, pluginType=ToOMETranslator > >>> [DEBUG] - > class='io.scif.ome.translators.EPSTranslator$OMEEPSTranslator', > priority=100.0, enabled=true, pluginType=FromOMETranslator > >>> [DEBUG] - class='net.imagej.operator.OpAdd', name='Add', > priority=100.0, enabled=true, pluginType=CalculatorOp > >>> [DEBUG] - class='net.imagej.app.ImageJApp', name='ImageJ', > priority=100.0, enabled=true, pluginType=App > >>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingRectangleTool', > name='Rectangle', description='Rectangular overlays', > iconPath='/icons/tools/rectangle.png', priority=100.0, enabled=true, > pluginType=Tool > >>> [DEBUG] - > class='net.imagej.ops.arithmetic.add.AddConstantToArrayByteImage', > name='add', priority=100.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$AddOp', > name='add', priority=100.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$DivideOp', > name='divide', priority=100.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.legacy.ui.LegacyUI', name='legacy', > priority=100.0, enabled=true, pluginType=UserInterface > >>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$MultiplyOp', > name='multiply', priority=100.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$SubtractOp', > name='subtract', priority=100.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ui.swing.overlay.EllipseJHotDrawAdapter', > priority=99.0, enabled=true, pluginType=JHotDrawAdapter > >>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingEllipseTool', > name='Oval', description='Oval selections', > iconPath='/icons/tools/oval.png', priority=99.0, enabled=true, > pluginType=Tool > >>> [DEBUG] - class='net.imagej.operator.OpSubtract', name='Subtract', > priority=99.0, enabled=true, pluginType=CalculatorOp > >>> [DEBUG] - > class='net.imagej.ui.swing.overlay.GeneralPathJHotDrawAdapter', > priority=98.5, enabled=true, pluginType=JHotDrawAdapter > >>> [DEBUG] - class='net.imagej.ui.swing.overlay.PolygonJHotDrawAdapter', > priority=98.0, enabled=true, pluginType=JHotDrawAdapter > >>> [DEBUG] - class='net.imagej.operator.OpMultiply', name='Multiply', > priority=98.0, enabled=true, pluginType=CalculatorOp > >>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPolygonTool', > name='Polygon', description='Polygon overlays', > iconPath='/icons/tools/polygon.png', priority=98.0, enabled=true, > pluginType=Tool > >>> [DEBUG] - class='net.imagej.ui.swing.overlay.LineJHotDrawAdapter', > priority=97.0, enabled=true, pluginType=JHotDrawAdapter > >>> [DEBUG] - class='net.imagej.operator.OpDivide', name='Divide', > priority=97.0, enabled=true, pluginType=CalculatorOp > >>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingLineTool', > name='Line', description='Straight line overlays', > iconPath='/icons/tools/line.png', priority=97.0, enabled=true, > pluginType=Tool > >>> [DEBUG] - class='net.imagej.ui.swing.overlay.PolylineJHotDrawAdapter', > priority=96.0, enabled=true, pluginType=JHotDrawAdapter > >>> [DEBUG] - class='net.imagej.operator.OpAnd', name='AND', > priority=96.0, enabled=true, pluginType=CalculatorOp > >>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPolylineTool', > name='Polyline', description='Polyline overlays', > iconPath='/icons/tools/polyline.png', priority=96.0, enabled=true, > pluginType=Tool > >>> [DEBUG] - class='net.imagej.ui.swing.overlay.AngleJHotDrawAdapter', > priority=95.0, enabled=true, pluginType=JHotDrawAdapter > >>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingAngleTool', > name='Angle', description='Angle overlays', > iconPath='/icons/tools/angle.png', priority=95.0, enabled=true, > pluginType=Tool > >>> [DEBUG] - class='net.imagej.operator.OpOr', name='OR', priority=95.0, > enabled=true, pluginType=CalculatorOp > >>> [DEBUG] - class='net.imagej.ui.swing.overlay.PointJHotDrawOverlay', > priority=94.0, enabled=true, pluginType=JHotDrawAdapter > >>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPointTool', > name='Point', description='Point overlays', > iconPath='/icons/tools/point.png', priority=94.0, enabled=true, > pluginType=Tool > >>> [DEBUG] - class='net.imagej.operator.OpXor', name='XOR', > priority=94.0, enabled=true, pluginType=CalculatorOp > >>> [DEBUG] - class='net.imagej.operator.OpMin', name='Min', > priority=93.0, enabled=true, pluginType=CalculatorOp > >>> [DEBUG] - class='net.imagej.operator.OpMax', name='Max', > priority=92.0, enabled=true, pluginType=CalculatorOp > >>> [DEBUG] - class='net.imagej.operator.OpAverage', name='Average', > priority=91.0, enabled=true, pluginType=CalculatorOp > >>> [DEBUG] - class='net.imagej.operator.OpDifference', name='Difference', > priority=90.0, enabled=true, pluginType=CalculatorOp > >>> [DEBUG] - class='net.imagej.operator.OpCopy', name='Copy', > priority=89.0, enabled=true, pluginType=CalculatorOp > >>> [DEBUG] - class='net.imagej.operator.OpTransparentZero', > name='Transparent-zero', priority=88.0, enabled=true, > pluginType=CalculatorOp > >>> [DEBUG] - > class='fiji.plugin.trackmate.tracking.oldlap.FastLAPTrackerFactory', > priority=10.0, enabled=true, pluginType=SpotTrackerFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.tracking.oldlap.SimpleFastLAPTrackerFactory', > priority=10.0, enabled=true, pluginType=SpotTrackerFactory > >>> [DEBUG] - class='net.imagej.legacy.DefaultLegacyService', > priority=1.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingChoiceRadioWidget', > priority=1.0, enabled=true, pluginType=InputWidget > >>> [DEBUG] - class='net.imagej.ops.onthefly.JavassistOptimizer', > priority=1.0, enabled=true, pluginType=Optimizer > >>> [DEBUG] - > class='fiji.plugin.trackmate.visualization.threedviewer.SpotDisplayer3DFactory', > priority=1.0, enabled=true, pluginType=ViewFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.tracking.kdtree.NearestNeighborTrackerFactory', > priority=1.0, enabled=true, pluginType=SpotTrackerFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.features.spot.SpotContrastAndSNRAnalyzerFactory', > priority=1.0, enabled=true, pluginType=SpotAnalyzerFactory > >>> [DEBUG] - class='net.imagej.ops.invert.InvertII', name='invert', > priority=1.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToDouble', > name='add', priority=0.6, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToLong', > name='add', priority=0.5, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToFloat', > name='add', priority=0.4, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToInteger', > name='add', priority=0.3, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToShort', > name='add', priority=0.2, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToByte', > name='add', priority=0.1, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.plugins.commands.assign.AndDataValuesWith', menu='Process > > Math > AND...', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.app.AboutImageJ', label='About ImageJ...', > menu='Help > About ImageJ...', iconPath='/icons/commands/information.png', > priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.assign.AbsDataValues', > menu='Process > Math > Abs...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionAdaptiveMedian', > menu='Process > Noise > Noise Reduction > Adaptive Median', priority=0.0, > enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.AddAxis', > menu='Image > Axes > Add Axis...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.AddData', > menu='Image > Data > Add Data...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.overlay.AddImage', > menu='Image > Overlay > Add Image', iconPath='/icons/commands/bricks.png', > priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.assign.AddNoiseToDataValues', > menu='Process > Noise > Add Noise...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.assign.AddSpecifiedNoiseToDataValues', > menu='Process > Noise > Add Specified Noise...', priority=0.0, > enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.assign.AddToDataValues', > menu='Process > Math > Add...', iconPath='/icons/commands/sum.png', > priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionAlphaTrimmedMean', > menu='Process > Noise > Noise Reduction > Alpha Trimmed Mean', > priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.animation.AnimationOptions', menu='Image > > Animation > Animation Options...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.options.OptionsAppearance', menu='Edit > > Options > Appearance...', priority=0.0, enabled=true, > pluginType=OptionsPlugin > >>> [DEBUG] - class='net.imagej.ops.commands.threshold.GlobalThresholder', > menu='Image > Threshold > Apply Threshold', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.options.OptionsArrowTool', menu='Edit > > Options > Arrow Tool...', priority=0.0, enabled=true, > pluginType=OptionsPlugin > >>> [DEBUG] - class='net.imagej.plugins.commands.display.AutoContrast', > menu='Image > Adjust > Auto-Contrast', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.axispos.AxisPositionBackward', > menu='Image > Axes > Axis Position Backward', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.axispos.AxisPositionForward', > menu='Image > Axes > Axis Position Forward', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.misc.Benchmark', > menu='Plugins > Utilities > Benchmark', > iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.Binner', > menu='Image > Transform > Bin...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.binary.Binarize', > menu='Process > Binary > Binarize...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.display.interactive.BrightnessContrast', > menu='Image > Adjust > Brightness/Contrast...', > iconPath='/icons/commands/contrast.png', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.debug.ButtonDemo', > menu='Plugins > Sandbox > Button Demo', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.display.CaptureImage', > menu='Plugins > Utilities > Capture Image', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.display.CaptureScreen', > menu='Plugins > Utilities > Capture Screen', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.typechange.TypeChanger', > menu='Image > Type > Change...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.display.ChannelsTool', > menu='Image > Color > Channels Tool...', > iconPath='/icons/commands/color_wheel.png', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.options.OptionsChannels', menu='Edit > > Options > Channels...', priority=0.0, enabled=true, pluginType=OptionsPlugin > >>> [DEBUG] - class='org.scijava.plugins.commands.io.ClearRecent', > label='Clear Recent', menu='File > Open Recent > Clear List', priority=0.0, > enabled=true, pluginType=Command > >>> [DEBUG] - class='org.scijava.plugins.commands.display.Close', > menu='File > Close', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.binary.CloseBinaryImage', > menu='Process > Binary > Close', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='org.scijava.plugins.commands.display.CloseAll', > menu='File > Close All', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.options.OptionsCompatibility', menu='Edit > > Options > Compatibility...', priority=0.0, enabled=true, > pluginType=OptionsPlugin > >>> [DEBUG] - class='net.imagej.options.OptionsCompiler', menu='Edit > > Options > Compiler...', priority=0.0, enabled=true, pluginType=OptionsPlugin > >>> [DEBUG] - > class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionContraharmonicMean', > menu='Process > Noise > Noise Reduction > Contraharmonic Mean', > priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.options.OptionsConversions', menu='Edit > > Options > Conversions...', priority=0.0, enabled=true, > pluginType=OptionsPlugin > >>> [DEBUG] - class='net.imagej.ops.commands.convert.ConvertImgPlus', > menu='Image > Convert', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.ops.commands.convolve.Convolve', > menu='Image > Convolve', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.app.CopyToSystem', > menu='Edit > Copy To System', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.binary.CreateMask', > menu='Process > Binary > Create Mask...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.app.CreateShortcut', > menu='Plugins > Shortcuts > Create Shortcut...', > iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.CropImage', > menu='Image > Crop', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.options.OptionsDicom', menu='Edit > > Options > DICOM...', priority=0.0, enabled=true, pluginType=OptionsPlugin > >>> [DEBUG] - class='net.imagej.options.OptionsOverlay', label='Default > Overlay Settings', menu='Image > Overlay > Overlay Options...', > priority=0.0, enabled=true, pluginType=OptionsPlugin > >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.DeleteAxis', > menu='Image > Axes > Delete Axis...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.DeleteData', > menu='Image > Data > Delete Data...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.display.interactive.DeleteThreshold', > menu='Image > Adjust > Delete Threshold', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.display.DeselectOverlays', menu='Edit > > Selection > Deselect Overlays', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='org.scijava.ui.swing.commands.DialogPromptDemo', > menu='Plugins > Sandbox > Dialog Prompt Demo', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.binary.DilateBinaryImage', menu='Process > > Binary > Dilate', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.assign.DivideDataValuesBy', > menu='Process > Math > Divide...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='org.scijava.plugins.commands.debug.DumpStack', > menu='Plugins > Debug > Dump Stack', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.DuplicateImage', > menu='Image > Duplicate', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.imglib.DuplicateImageContext', > menu='Duplicate...', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsEast', > menu='Process > Shadows > East', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.EditAxes', > menu='Image > Axes > Edit Axes...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.assign.EquationDataValues', > menu='Process > Math > Equation...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.binary.ErodeBinaryImage', > menu='Process > Binary > Erode', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.assign.ExpDataValues', > menu='Process > Math > Exp...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.assign.FillDataValues', > menu='Edit > Fill', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='org.scijava.ui.swing.commands.CommandFinder', > menu='Plugins > Utilities > Find Commands...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.neigh.FindEdges', > menu='Process > Find Edges', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.display.Flatten', > menu='Image > Overlay > Flatten', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.FlipAxis', > menu='Image > Transform > Flip Axis', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.rotate.FlipHorizontally', > menu='Image > Transform > Flip Horizontally', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.rotate.FlipVertically', > menu='Image > Transform > Flip Vertically', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.tools.FloodFillToolConfig', > label='Flood Fill Tool', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.options.OptionsFont', menu='Edit > Options > > Fonts...', priority=0.0, enabled=true, pluginType=OptionsPlugin > >>> [DEBUG] - > class='net.imagej.plugins.commands.overlay.FromOverlayManager', menu='Image > > Overlay > From Overlay Manager', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.assign.GammaDataValues', > menu='Process > Math > Gamma...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.GaussianBlur', > menu='Process > Filters > Gaussian Blur...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionGeometricMean', > menu='Process > Noise > Noise Reduction > Geometric Mean', priority=0.0, > enabled=true, pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionHarmonicMean', > menu='Process > Noise > Noise Reduction > Harmonic Mean', priority=0.0, > enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.display.HistogramPlot', > menu='Analyze > Histogram Plot', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.calculator.ImageCalculator', > menu='Process > Image Calculator...', > iconPath='/icons/commands/calculator.png', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.io.OpenDataset', > menu='File > Import > Image... ', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.io.SaveDataset', > menu='File > Export > Image... ', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.app.ImageJWebsite', > menu='Help > ImageJ Website...', iconPath='/icons/commands/world_link.png', > priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.legacy.ImageJ2Options', label='ImageJ2 > Options', menu='Edit > Options > ImageJ2...', priority=0.0, enabled=true, > pluginType=OptionsPlugin > >>> [DEBUG] - class='net.imagej.options.OptionsInputOutput', menu='Edit > > Options > Input/Output...', priority=0.0, enabled=true, > pluginType=OptionsPlugin > >>> [DEBUG] - class='net.imagej.plugins.commands.debug.InspectImg', > menu='Plugins > Debug > Inspect Image', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='org.scijava.ui.swing.commands.InspectObjects', > menu='Plugins > Debug > Inspect Objects', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='org.scijava.plugins.commands.debug.InvalidCommandDemo$InvalidCommand', > menu='Plugins > Debug > Invalid Command', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.assign.InvertDataValues', > menu='Edit > Invert...', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.lut.LUTSelector', label='LUT Selector', > menu='Image > Lookup Tables > Select...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.overlay.OverlayLabels', > menu='Image > Overlay > Labels...', iconPath='/icons/commands/bricks.png', > priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.options.OptionsLineWidth', menu='Edit > > Options > Line Width...', priority=0.0, enabled=true, > pluginType=OptionsPlugin > >>> [DEBUG] - class='net.imagej.plugins.commands.app.ListShortcuts', > menu='Plugins > Shortcuts > List Shortcuts...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.assign.LogDataValues', > menu='Process > Math > Log...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='org.scijava.ui.swing.options.OptionsLookAndFeel', > menu='Edit > Options > Look and Feel...', priority=0.0, enabled=true, > pluginType=OptionsPlugin > >>> [DEBUG] - class='net.imagej.plugins.commands.binary.MakeBinary', > menu='Process > Binary > Make Binary...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.overlay.ConvertToMask', > menu='Process > Binary > Make Mask Overlay...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.debug.MandelbrotSetImage', menu='Plugins > > Sandbox > Mandelbrot Set', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.assign.MaxDataValues', > menu='Process > Math > Max...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMax', > menu='Process > Noise > Noise Reduction > Maximum', priority=0.0, > enabled=true, pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMean', > menu='Process > Noise > Noise Reduction > Mean', priority=0.0, > enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.debug.MeasurementDemo', > menu='Plugins > Sandbox > Measurement Demo', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMedian', > menu='Process > Noise > Noise Reduction > Median', priority=0.0, > enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.options.OptionsMemoryAndThreads', > menu='Edit > Options > Memory & Threads...', priority=0.0, enabled=true, > pluginType=OptionsPlugin > >>> [DEBUG] - > class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMidpoint', > menu='Process > Noise > Noise Reduction > Midpoint', priority=0.0, > enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.assign.MinDataValues', > menu='Process > Math > Min...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMin', > menu='Process > Noise > Noise Reduction > Minimum', priority=0.0, > enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.options.OptionsMisc', menu='Edit > Options > > Misc...', priority=0.0, enabled=true, pluginType=OptionsPlugin > >>> [DEBUG] - class='net.imagej.legacy.plugin.MixedWorldCommand', > menu='Plugins > Sandbox > Mixed World Command', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.debug.MultidimImage', > menu='Plugins > Sandbox > Multidimensional Test Image', priority=0.0, > enabled=true, pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.assign.MultiplyDataValuesBy', > menu='Process > Math > Multiply...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.NanBackground', > menu='Process > Math > NaN Background', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.io.NewImage', label='New > Image...', menu='File > New > Image...', > iconPath='/icons/commands/picture.png', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNorth', > menu='Process > Shadows > North', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.correlate.ShadowsNortheast', > menu='Process > Shadows > Northeast', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.correlate.ShadowsNorthwest', > menu='Process > Shadows > Northwest', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.assign.OrDataValuesWith', > menu='Process > Math > OR...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.binary.OpenBinaryImage', > menu='Process > Binary > Open', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='org.scijava.plugins.commands.io.OpenFile', menu='File > > Open...', iconPath='/icons/commands/folder_picture.png', priority=0.0, > enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomOriginalScale', > menu='Image > Zoom > Original Scale', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.display.interactive.OrthogonalViews', > menu='Image > Stacks > Orthogonal Views', > iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.ui.swing.commands.OverlayManager', > menu='Image > Overlay > Overlay Manager', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.overlay.OverlayProperties', > label='Overlay Properties...', menu='Image > Overlay > Properties...', > priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.tools.PaintBrushToolConfig', > label='Paintbrush Tool', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='org.scijava.plugins.commands.debug.ParamAssignOrder', > menu='Plugins > Sandbox > Parameter Assignment Order', priority=0.0, > enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.tools.PencilToolConfig', > label='Pencil Tool', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='fiji.DefaultFijiService', priority=0.0, enabled=true, > pluginType=Service > >>> [DEBUG] - class='fiji.patches.FijiAppConfiguration', priority=0.0, > enabled=true, pluginType=LegacyAppConfiguration > >>> [DEBUG] - class='fiji.patches.OldLegacyEditor', priority=0.0, > enabled=true, pluginType=LegacyEditor > >>> [DEBUG] - class='fiji.patches.OldAppConfiguration', priority=0.0, > enabled=true, pluginType=LegacyAppConfiguration > >>> [DEBUG] - class='net.imglib2.meta.units.DefaultUnitService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTObjectWidget', > priority=0.0, enabled=true, pluginType=InputWidget > >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTToggleWidget', > priority=0.0, enabled=true, pluginType=InputWidget > >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTChoiceWidget', > priority=0.0, enabled=true, pluginType=InputWidget > >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTNumberWidget', > priority=0.0, enabled=true, pluginType=InputWidget > >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTTextWidget', > priority=0.0, enabled=true, pluginType=InputWidget > >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTFileWidget', > priority=0.0, enabled=true, pluginType=InputWidget > >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTButtonWidget', > priority=0.0, enabled=true, pluginType=InputWidget > >>> [DEBUG] - class='net.imagej.plugins.uploaders.ssh.SSHFileUploader', > priority=0.0, enabled=true, pluginType=Uploader > >>> [DEBUG] - class='net.imagej.plugins.uploaders.ssh.SFTPFileUploader', > priority=0.0, enabled=true, pluginType=Uploader > >>> [DEBUG] - class='net.imagej.plugins.uploaders.webdav.WebDAVUploader', > priority=0.0, enabled=true, pluginType=Uploader > >>> [DEBUG] - > class='org.scijava.plugins.text.markdown.MarkdownTextFormat', priority=0.0, > enabled=true, pluginType=TextFormat > >>> [DEBUG] - class='net.imagej.ui.awt.AWTRenderingService', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.ui.awt.AWTScreenCaptureService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.object.DefaultObjectService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.convert.DefaultConverter', priority=0.0, > enabled=true, pluginType=Converter > >>> [DEBUG] - class='org.scijava.convert.DefaultConvertService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.input.DefaultInputService', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.ui.DefaultUIService', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.ui.dnd.DefaultDragAndDropService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.ui.dnd.ListDragAndDropHandler', > priority=0.0, enabled=true, pluginType=DragAndDropHandler > >>> [DEBUG] - class='org.scijava.ui.dnd.ScriptFileDragAndDropHandler', > priority=0.0, enabled=true, pluginType=DragAndDropHandler > >>> [DEBUG] - class='org.scijava.ui.console.UIArgument', priority=0.0, > enabled=true, pluginType=ConsoleArgument > >>> [DEBUG] - class='org.scijava.plugin.DefaultPluginService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.text.DefaultTextService', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.display.DefaultDisplayService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.prefs.DefaultPrefService', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.io.DefaultRecentFileService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.io.console.OpenArgument', priority=0.0, > enabled=true, pluginType=ConsoleArgument > >>> [DEBUG] - class='org.scijava.io.DefaultIOService', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.widget.DefaultWidgetService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.menu.DefaultMenuService', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.tool.DefaultToolService', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.app.DefaultAppService', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.app.DefaultStatusService', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.module.DefaultModuleService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.welcome.DefaultWelcomeService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.thread.DefaultThreadService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.script.io.ScriptIOPlugin', priority=0.0, > enabled=true, pluginType=IOPlugin > >>> [DEBUG] - class='org.scijava.script.DefaultScriptHeaderService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.event.DefaultEventHistory', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.platform.DefaultPlatformService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.options.DefaultOptionsService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.command.DefaultCommandService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.command.console.RunArgument', > priority=0.0, enabled=true, pluginType=ConsoleArgument > >>> [DEBUG] - class='org.scijava.console.DefaultConsoleService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.SciJava', priority=0.0, enabled=true, > pluginType=Gateway > >>> [DEBUG] - class='net.imagej.operator.DefaultCalculatorService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.autoscale.DefaultAutoscaleService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.sampler.DefaultSamplerService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.lut.io.LUTIOPlugin', priority=0.0, > enabled=true, pluginType=IOPlugin > >>> [DEBUG] - class='net.imagej.display.DefaultDatasetView', priority=0.0, > enabled=true, pluginType=DataView > >>> [DEBUG] - class='net.imagej.display.DefaultImageDisplay', > priority=0.0, enabled=true, pluginType=Display > >>> [DEBUG] - class='net.imagej.display.DefaultZoomService', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.display.DefaultOverlayService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.display.DefaultImageDisplayService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.display.DefaultOverlayView', priority=0.0, > enabled=true, pluginType=DataView > >>> [DEBUG] - class='net.imagej.display.DefaultWindowService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.types.DataType32BitSignedFloat', > priority=0.0, enabled=true, pluginType=DataType > >>> [DEBUG] - class='net.imagej.types.DataType12BitUnsignedInteger', > priority=0.0, enabled=true, pluginType=DataType > >>> [DEBUG] - class='net.imagej.types.DataType64BitSignedFloat', > priority=0.0, enabled=true, pluginType=DataType > >>> [DEBUG] - class='net.imagej.types.DataType8BitSignedInteger', > priority=0.0, enabled=true, pluginType=DataType > >>> [DEBUG] - class='net.imagej.types.DataType32BitUnsignedInteger', > priority=0.0, enabled=true, pluginType=DataType > >>> [DEBUG] - class='net.imagej.types.DataType32BitSignedInteger', > priority=0.0, enabled=true, pluginType=DataType > >>> [DEBUG] - class='net.imagej.types.DataType64BitSignedInteger', > priority=0.0, enabled=true, pluginType=DataType > >>> [DEBUG] - class='net.imagej.types.DataType16BitSignedInteger', > priority=0.0, enabled=true, pluginType=DataType > >>> [DEBUG] - class='net.imagej.types.DataType16BitUnsignedInteger', > priority=0.0, enabled=true, pluginType=DataType > >>> [DEBUG] - class='net.imagej.types.DataType1BitUnsignedInteger', > priority=0.0, enabled=true, pluginType=DataType > >>> [DEBUG] - class='net.imagej.types.DataType8BitUnsignedInteger', > priority=0.0, enabled=true, pluginType=DataType > >>> [DEBUG] - class='net.imagej.types.DefaultDataTypeService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.DefaultImgPlusService', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.minmax.DefaultMinMaxMethod', priority=0.0, > enabled=true, pluginType=MinMaxMethod > >>> [DEBUG] - class='net.imagej.ui.DefaultImageJUIService', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.ui.dnd.LUTFileDragAndDropHandler', > priority=0.0, enabled=true, pluginType=DragAndDropHandler > >>> [DEBUG] - class='net.imagej.measure.DefaultStatisticsService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.measure.DefaultMeasurementService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.threshold.DefaultThresholdService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.animation.DefaultAnimationService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.table.DefaultTableDisplay', priority=0.0, > enabled=true, pluginType=Display > >>> [DEBUG] - class='net.imagej.DefaultDatasetService', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='io.scif.io.URLHandle', priority=0.0, enabled=true, > pluginType=IStreamAccess > >>> [DEBUG] - class='io.scif.codec.LZWCodec', priority=0.0, enabled=true, > pluginType=Codec > >>> [DEBUG] - class='io.scif.io.DefaultNIOService', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='io.scif.img.converters.DefaultPlaneConverterService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='io.scif.img.cell.SCIFIOCellCacheCleaningProvider', > priority=0.0, enabled=true, pluginType=RefProvider > >>> [DEBUG] - class='io.scif.codec.JPEG2000Codec', priority=0.0, > enabled=true, pluginType=Codec > >>> [DEBUG] - class='io.scif.img.DefaultImgUtilityService', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='io.scif.gui.DefaultGUIService', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='io.scif.filters.DimensionSwapper', priority=0.0, > enabled=true, pluginType=Filter > >>> [DEBUG] - class='io.scif.xml.DefaultXMLService', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='io.scif.codec.HuffmanCodec', priority=0.0, > enabled=true, pluginType=Codec > >>> [DEBUG] - class='io.scif.refs.DefaultRefManagerService', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='io.scif.services.DefaultFormatService', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='io.scif.codec.RPZACodec', priority=0.0, enabled=true, > pluginType=Codec > >>> [DEBUG] - class='io.scif.codec.MJPBCodec', priority=0.0, enabled=true, > pluginType=Codec > >>> [DEBUG] - class='io.scif.codec.PassthroughCodec', priority=0.0, > enabled=true, pluginType=Codec > >>> [DEBUG] - class='io.scif.filters.PlaneSeparatorMetadata', > priority=0.0, enabled=true, pluginType=MetadataWrapper > >>> [DEBUG] - class='io.scif.filters.ChannelFiller', priority=0.0, > enabled=true, pluginType=Filter > >>> [DEBUG] - class='io.scif.codec.PackbitsCodec', priority=0.0, > enabled=true, pluginType=Codec > >>> [DEBUG] - class='io.scif.filters.MinMaxFilter', priority=0.0, > enabled=true, pluginType=Filter > >>> [DEBUG] - class='io.scif.io.BZip2Handle', priority=0.0, enabled=true, > pluginType=IStreamAccess > >>> [DEBUG] - class='io.scif.services.DefaultTranslatorService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='io.scif.img.cell.RefMapCleaningProvider', > priority=0.0, enabled=true, pluginType=RefProvider > >>> [DEBUG] - class='io.scif.codec.QTRLECodec', priority=0.0, > enabled=true, pluginType=Codec > >>> [DEBUG] - class='io.scif.io.GZipHandle', priority=0.0, enabled=true, > pluginType=IStreamAccess > >>> [DEBUG] - class='io.scif.codec.LosslessJPEGCodec', priority=0.0, > enabled=true, pluginType=Codec > >>> [DEBUG] - class='io.scif.codec.MSVideoCodec', priority=0.0, > enabled=true, pluginType=Codec > >>> [DEBUG] - class='io.scif.filters.PlaneSeparator', priority=0.0, > enabled=true, pluginType=Filter > >>> [DEBUG] - class='io.scif.codec.Base64Codec', priority=0.0, > enabled=true, pluginType=Codec > >>> [DEBUG] - class='io.scif.SCIFIO', priority=0.0, enabled=true, > pluginType=Gateway > >>> [DEBUG] - class='io.scif.codec.DefaultCodecService', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='io.scif.codec.JPEGCodec', priority=0.0, enabled=true, > pluginType=Codec > >>> [DEBUG] - class='io.scif.img.ImgPlusCtxCleaningProvider', > priority=0.0, enabled=true, pluginType=RefProvider > >>> [DEBUG] - class='io.scif.codec.LuraWaveCodec', priority=0.0, > enabled=true, pluginType=Codec > >>> [DEBUG] - class='io.scif.img.cell.SCIFIOCellCleaningProvider', > priority=0.0, enabled=true, pluginType=RefProvider > >>> [DEBUG] - class='io.scif.codec.MSRLECodec', priority=0.0, > enabled=true, pluginType=Codec > >>> [DEBUG] - class='io.scif.img.cell.cache.MapDBCache', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='io.scif.DefaultMetadataService', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='io.scif.img.cell.SCIFIOCellImgCleaningProvider', > priority=0.0, enabled=true, pluginType=RefProvider > >>> [DEBUG] - class='io.scif.filters.FileStitcher', priority=0.0, > enabled=true, pluginType=Filter > >>> [DEBUG] - class='io.scif.services.DefaultFilePatternService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='io.scif.io.ZipHandle', priority=0.0, enabled=true, > pluginType=IStreamAccess > >>> [DEBUG] - class='io.scif.codec.NikonCodec', priority=0.0, > enabled=true, pluginType=Codec > >>> [DEBUG] - class='io.scif.formats.tiff.DefaultTiffService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='io.scif.services.DefaultLocationService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='io.scif.codec.ZlibCodec', priority=0.0, enabled=true, > pluginType=Codec > >>> [DEBUG] - class='io.scif.services.JAIIIOServiceImpl', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='io.scif.formats.qt.DefaultQTJavaService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Batch', > priority=0.0, enabled=true, pluginType=ConsoleArgument > >>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$IJPath', > priority=0.0, enabled=true, pluginType=ConsoleArgument > >>> [DEBUG] - class='net.imagej.legacy.plugin.LegacyAutoImporter', > priority=0.0, enabled=true, pluginType=AutoImporter > >>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Macro', > priority=0.0, enabled=true, pluginType=ConsoleArgument > >>> [DEBUG] - class='net.imagej.legacy.LegacyJavaRunner', priority=0.0, > enabled=true, pluginType=JavaRunner > >>> [DEBUG] - > class='net.imagej.legacy.display.DefaultImagePlusDisplayViewer', > priority=0.0, enabled=true, pluginType=DisplayViewer > >>> [DEBUG] - class='net.imagej.legacy.display.DefaultImagePlusDisplay', > priority=0.0, enabled=true, pluginType=Display > >>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Run', > priority=0.0, enabled=true, pluginType=ConsoleArgument > >>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Filename', > priority=0.0, enabled=true, pluginType=ConsoleArgument > >>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Debug', > priority=0.0, enabled=true, pluginType=ConsoleArgument > >>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Eval', > priority=0.0, enabled=true, pluginType=ConsoleArgument > >>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Port', > priority=0.0, enabled=true, pluginType=ConsoleArgument > >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingDateWidget', > priority=0.0, enabled=true, pluginType=InputWidget > >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingFileWidget', > priority=0.0, enabled=true, pluginType=InputWidget > >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingChoiceWidget', > priority=0.0, enabled=true, pluginType=InputWidget > >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingNumberWidget', > priority=0.0, enabled=true, pluginType=InputWidget > >>> [DEBUG] - class='org.scijava.ui.swing.SwingIconService', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - > class='org.scijava.ui.swing.viewer.text.SwingTextDisplayViewer', > priority=0.0, enabled=true, pluginType=DisplayViewer > >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingObjectWidget', > priority=0.0, enabled=true, pluginType=InputWidget > >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingToggleWidget', > priority=0.0, enabled=true, pluginType=InputWidget > >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingTextWidget', > priority=0.0, enabled=true, pluginType=InputWidget > >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingColorWidget', > priority=0.0, enabled=true, pluginType=InputWidget > >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingButtonWidget', > priority=0.0, enabled=true, pluginType=InputWidget > >>> [DEBUG] - > class='org.scijava.plugins.scripting.java.CommandJavaRunner', priority=0.0, > enabled=true, pluginType=JavaRunner > >>> [DEBUG] - > class='org.scijava.plugins.scripting.java.DefaultJavaService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - > class='net.imagej.ui.swing.sdi.viewer.SwingSdiImageDisplayViewer', > priority=0.0, enabled=true, pluginType=DisplayViewer > >>> [DEBUG] - > class='net.imagej.ui.swing.viewer.table.SwingTableDisplayViewer', > priority=0.0, enabled=true, pluginType=DisplayViewer > >>> [DEBUG] - class='net.imagej.ui.swing.overlay.JHotDrawService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - > class='net.imagej.ui.swing.mdi.viewer.SwingMdiImageDisplayViewer', > priority=0.0, enabled=true, pluginType=DisplayViewer > >>> [DEBUG] - class='net.imagej.ui.swing.widget.SwingColorTableWidget', > priority=0.0, enabled=true, pluginType=InputWidget > >>> [DEBUG] - class='net.imagej.ui.swing.widget.SwingDimSelectionWidget', > priority=0.0, enabled=true, pluginType=InputWidget > >>> [DEBUG] - class='net.imagej.ui.swing.widget.SwingHistogramWidget', > priority=0.0, enabled=true, pluginType=InputWidget > >>> [DEBUG] - class='net.imagej.updater.FileUploader', priority=0.0, > enabled=true, pluginType=Uploader > >>> [DEBUG] - class='net.imagej.updater.DefaultUpdateService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.updater.DefaultUploaderService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.ImageJ', priority=0.0, enabled=true, > pluginType=Gateway > >>> [DEBUG] - class='net.imagej.ops.DefaultOpService', priority=0.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.ops.threshold.LocalMean', priority=0.0, > enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.DefaultOpMatchingService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.plugins.commands.dataset.LoadDataset', > priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.overlay.SelectedManagerOverlayProperties', > priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.misc.ApplyLookupTable', > priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - > class='org.scijava.plugins.scripting.jruby.JRubyScriptHeader', > priority=0.0, enabled=true, pluginType=ScriptHeader > >>> [DEBUG] - > class='fiji.plugin.trackmate.action.TrackBranchAnalysis$Factory', > priority=0.0, enabled=true, pluginType=TrackMateActionFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.features.track.TrackLocationAnalyzer', > priority=0.0, enabled=true, pluginType=TrackAnalyzer > >>> [DEBUG] - > class='fiji.plugin.trackmate.visualization.hyperstack.HyperStackDisplayerFactory', > priority=0.0, enabled=true, pluginType=ViewFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.features.edges.EdgeTimeLocationAnalyzer', > priority=0.0, enabled=true, pluginType=EdgeAnalyzer > >>> [DEBUG] - > class='fiji.plugin.trackmate.action.ResetRadiusAction$Factory', > priority=0.0, enabled=true, pluginType=TrackMateActionFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.action.RecalculateFeatureAction$Factory', > priority=0.0, enabled=true, pluginType=TrackMateActionFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.action.ISBIChallengeExporter$Factory', > priority=0.0, enabled=true, pluginType=TrackMateActionFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.action.MergeFileAction$Factory', priority=0.0, > enabled=true, pluginType=TrackMateActionFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.features.spot.SpotRadiusEstimatorFactory', > priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.features.track.TrackBranchingAnalyzer', > priority=0.0, enabled=true, pluginType=TrackAnalyzer > >>> [DEBUG] - > class='fiji.plugin.trackmate.action.PlotNSpotsVsTimeAction$Factory', > priority=0.0, enabled=true, pluginType=TrackMateActionFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.action.ExportStatsToIJAction$Factory', > priority=0.0, enabled=true, pluginType=TrackMateActionFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.features.edges.EdgeTargetAnalyzer', > priority=0.0, enabled=true, pluginType=EdgeAnalyzer > >>> [DEBUG] - > class='fiji.plugin.trackmate.features.track.TrackDurationAnalyzer', > priority=0.0, enabled=true, pluginType=TrackAnalyzer > >>> [DEBUG] - > class='fiji.plugin.trackmate.features.spot.SpotIntensityAnalyzerFactory', > priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.features.edges.EdgeVelocityAnalyzer', > priority=0.0, enabled=true, pluginType=EdgeAnalyzer > >>> [DEBUG] - class='fiji.plugin.trackmate.detection.LogDetectorFactory', > priority=0.0, enabled=true, pluginType=SpotDetectorFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.action.ExportTracksToXML$Factory', > priority=0.0, enabled=true, pluginType=TrackMateActionFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.action.LinkNew3DViewerAction$Factory', > priority=0.0, enabled=true, pluginType=TrackMateActionFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.tracking.oldlap.SimpleLAPTrackerFactory', > priority=0.0, enabled=true, pluginType=SpotTrackerFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.action.ResetSpotTimeFeatureAction$Factory', > priority=0.0, enabled=true, pluginType=TrackMateActionFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.action.RadiusToEstimatedAction$Factory', > priority=0.0, enabled=true, pluginType=TrackMateActionFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.action.IcyTrackExporter$Factory', > priority=0.0, enabled=true, pluginType=TrackMateActionFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.action.CaptureOverlayAction$Factory', > priority=0.0, enabled=true, pluginType=TrackMateActionFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.tracking.sparselap.SimpleSparseLAPTrackerFactory', > priority=0.0, enabled=true, pluginType=SpotTrackerFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.features.spot.SpotMorphologyAnalyzerFactory', > priority=0.0, enabled=false, pluginType=SpotAnalyzerFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.features.track.TrackSpotQualityFeatureAnalyzer', > priority=0.0, enabled=true, pluginType=TrackAnalyzer > >>> [DEBUG] - > class='fiji.plugin.trackmate.action.CopyOverlayAction$Factory', > priority=0.0, enabled=true, pluginType=TrackMateActionFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.tracking.sparselap.SparseLAPTrackerFactory', > priority=0.0, enabled=true, pluginType=SpotTrackerFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.detection.ManualDetectorFactory', > priority=0.0, enabled=true, pluginType=SpotDetectorFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.features.manual.ManualSpotColorAnalyzerFactory', > priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory > >>> [DEBUG] - class='fiji.plugin.trackmate.detection.DogDetectorFactory', > priority=0.0, enabled=true, pluginType=SpotDetectorFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.action.ExtractTrackStackAction$Factory', > priority=0.0, enabled=true, pluginType=TrackMateActionFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.tracking.oldlap.LAPTrackerFactory', > priority=0.0, enabled=true, pluginType=SpotTrackerFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.features.manual.ManualEdgeColorAnalyzer', > priority=0.0, enabled=true, pluginType=EdgeAnalyzer > >>> [DEBUG] - > class='fiji.plugin.trackmate.features.spot.SpotContrastAnalyzerFactory', > priority=0.0, enabled=false, pluginType=SpotAnalyzerFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.features.track.TrackSpeedStatisticsAnalyzer', > priority=0.0, enabled=true, pluginType=TrackAnalyzer > >>> [DEBUG] - > class='fiji.plugin.trackmate.detection.DownsampleLogDetectorFactory', > priority=0.0, enabled=true, pluginType=SpotDetectorFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.visualization.trackscheme.TrackSchemeFactory', > priority=0.0, enabled=true, pluginType=ViewFactory > >>> [DEBUG] - > class='fiji.plugin.trackmate.features.track.TrackIndexAnalyzer', > priority=0.0, enabled=true, pluginType=TrackAnalyzer > >>> [DEBUG] - class='io.scif.cli.commands.Help', priority=0.0, > enabled=true, pluginType=SCIFIOToolCommand > >>> [DEBUG] - class='io.scif.cli.commands.Show', priority=0.0, > enabled=true, pluginType=SCIFIOToolCommand > >>> [DEBUG] - class='io.scif.cli.commands.Info', priority=0.0, > enabled=true, pluginType=SCIFIOToolCommand > >>> [DEBUG] - class='io.scif.cli.commands.Convert', priority=0.0, > enabled=true, pluginType=SCIFIOToolCommand > >>> [DEBUG] - class='io.scif.ome.commands.OMEXMLToolCommand', > priority=0.0, enabled=true, pluginType=SCIFIOToolCommand > >>> [DEBUG] - class='io.scif.ome.translators.DefaultOMETranslator', > priority=0.0, enabled=true, pluginType=ToOMETranslator > >>> [DEBUG] - class='io.scif.ome.services.DefaultOMEXMLService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='io.scif.ome.services.DefaultOMEMetadataService', > priority=0.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat', priority=0.0, > enabled=true, pluginType=Format > >>> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat$OMETranslator', > priority=0.0, enabled=true, pluginType=Translator > >>> [DEBUG] - class='io.scif.tools.commands.Show', priority=0.0, > enabled=true, pluginType=SCIFIOToolCommand > >>> [DEBUG] - class='io.scif.tools.commands.Help', priority=0.0, > enabled=true, pluginType=SCIFIOToolCommand > >>> [DEBUG] - class='io.scif.tools.commands.Info', priority=0.0, > enabled=true, pluginType=SCIFIOToolCommand > >>> [DEBUG] - class='io.scif.tools.commands.Convert', priority=0.0, > enabled=true, pluginType=SCIFIOToolCommand > >>> [DEBUG] - class='io.scif.lifesci.SDTFormat', priority=0.0, > enabled=true, pluginType=Format > >>> [DEBUG] - class='net.imagej.options.OptionsPointTool', menu='Edit > > Options > Point Tool...', priority=0.0, enabled=true, > pluginType=OptionsPlugin > >>> [DEBUG] - class='net.imagej.plugins.commands.debug.PointSetDemo', > menu='Plugins > Sandbox > PointSet Demo', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.assign.PowerDataValues', > menu='Process > Math > Power...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.app.Preferences', label='Preferences', > menu='File > Preferences', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.options.OptionsProfilePlot', menu='Edit > > Options > Profile Plot Options...', priority=0.0, enabled=true, > pluginType=OptionsPlugin > >>> [DEBUG] - class='net.imagej.ops.commands.project.ProjectCommand', > menu='Image > Threshold > Project', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.options.OptionsProxy', menu='Edit > > Options > Proxy Settings...', priority=0.0, enabled=true, > pluginType=OptionsPlugin > >>> [DEBUG] - class='net.imagej.app.QuitProgram', label='Quit', menu='File > > Quit', iconPath='/icons/commands/door_in.png', priority=0.0, > enabled=true, pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.assign.noisereduce.RadialNeighborhoodSpecifier', > label='Radial Neighborhood Specification', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.assign.ReciprocalDataValues', > menu='Process > Math > Reciprocal...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.assign.noisereduce.RectangularNeighborhoodSpecifier', > label='Rectangular Neighborhood Specification', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.display.RemoveOverlay', > menu='Image > Overlay > Remove Overlay', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.display.RemoveOverlayReferences', > menu='Image > Overlay > Remove Overlay References', priority=0.0, > enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.ReorderAxis', > menu='Image > Axes > Reorder Axis', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.restructure.ReorderData', > menu='Image > Data > Reorder Data...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.options.OptionsReset', menu='Edit > > Options > Reset', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.ResizeImage', > menu='Image > Adjust > Resize...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.ResliceImage', > menu='Image > Stacks > Reslice...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.io.RevertImage', > menu='File > Revert', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.rotate.Rotate90DegreesLeft', menu='Image > > Transform > Rotate 90 Degrees Left', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.rotate.Rotate90DegreesRight', > menu='Image > Transform > Rotate 90 Degrees Right', priority=0.0, > enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.RotateImageXY', > menu='Image > Transform > Rotate...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.options.OptionsRoundedRectangleTool', > menu='Edit > Options > Rounded Rect Tool...', priority=0.0, enabled=true, > pluginType=OptionsPlugin > >>> [DEBUG] - class='org.scijava.plugins.commands.script.RunScript', > menu='Plugins > Run Script...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.SaltAndPepper', > menu='Process > Noise > Salt and Pepper', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.io.SaveImage', menu='File > > Save', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.io.SaveAsImage', > menu='File > Save As...', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.ui.swing.script.ScriptEditor', menu='File > > New > Script...', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.display.SelectOverlays', > menu='Edit > Selection > Select Overlays', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.display.SelectView', > menu='Edit > Selection > Select View', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.display.SelectWindow', label='Select > Window...', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.legacy.plugin.GetPath', label='Select > path', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.axispos.SetActiveAxis', > menu='Image > Axes > Set Active Axis...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.axispos.SetAxisPosition', > menu='Image > Axes > Set Axis Position...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomSet', label='Set > Zoom...', menu='Image > Zoom > Set...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.assign.SetDataValues', > menu='Process > Math > Set...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsDemo', > menu='Process > Shadows > Shadows Demo', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.correlate.SharpenDataValues', > menu='Process > Sharpen', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.misc.ShowInfo', > menu='Image > Show Info...', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.display.ShowLUT', > menu='Image > Color > Show LUT', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.display.ShowLUTAsTable', > menu='Image > Color > Show LUT As Table', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.correlate.SmoothDataValues', > menu='Process > Smooth', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsSouth', > menu='Process > Shadows > South', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.correlate.ShadowsSoutheast', > menu='Process > Shadows > Southeast', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.correlate.ShadowsSouthwest', > menu='Process > Shadows > Southwest', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.overlay.SelectionSpecify', menu='Edit > > Selection > Specify...', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.display.SpectralComposite', menu='Image > > Color > Spectral Composite...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.restructure.SplitChannelsContext', > menu='Split Channels', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.tools.SprayCanToolConfig', > label='Spray Can Tool', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.assign.SquareRootDataValues', > menu='Process > Math > Square Root...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.assign.SquareDataValues', > menu='Process > Math > Square...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.animation.StartAnimation', menu='Image > > Animation > Start Animation', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.debug.StatisticsDemo', > menu='Plugins > Sandbox > Statistics Demo', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.animation.StopAllAnimations', > menu='Image > Animation > Stop All Animations', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.animation.StopAnimation', > menu='Image > Animation > Stop Animation', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='org.scijava.plugins.commands.debug.ShowSubscribers', > menu='Plugins > Debug > Subscribers', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.assign.SubtractFromDataValues', > menu='Process > Math > Subtract...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.legacy.plugin.SwitchToLegacyMode', > menu='Help > Switch to Legacy Mode', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.display.interactive.SynchronizeWindows', > menu='Analyze > Tools > Synchronize Windows', > iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='org.scijava.plugins.commands.debug.SystemInformation', menu='Plugins > > Debug > System Information', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.debug.TableDemo', > menu='Plugins > Sandbox > Table Demo', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='org.scijava.plugins.commands.debug.TextDisplayTest', > menu='Plugins > Sandbox > TextDisplayTest', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.updater.PromptUserToUpdate', label='There > are updates available', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.display.interactive.Threshold', > menu='Image > Adjust > Threshold...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='org.scijava.ui.swing.mdi.WindowsTileVertical', > menu='Window > Tile Vertical', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomToSelection', > menu='Image > Zoom > To Selection', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.imglib.TranslateImage', > menu='Image > Transform > Translate...', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionTrimmedMean', > menu='Process > Noise > Noise Reduction > Trimmed Mean', priority=0.0, > enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.updater.CheckForUpdates', > label='Up-to-date check', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.ui.swing.updater.ImageJUpdater', > menu='Help > Update...', priority=0.0, enabled=true, pluginType=UpdaterUI > >>> [DEBUG] - > class='net.imagej.plugins.commands.upload.SampleImageUploader', menu='Help > > Upload Sample Image', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.zoom.Zoom100Percent', > menu='Image > Zoom > View 100%', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.options.OptionsWandTool', menu='Edit > > Options > Wand Tool...', priority=0.0, enabled=true, > pluginType=OptionsPlugin > >>> [DEBUG] - class='org.scijava.ui.swing.commands.WatchEvents', > menu='Plugins > Debug > Watch Events', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsWest', > menu='Process > Shadows > West', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.plugins.commands.assign.XorDataValuesWith', menu='Process > > Math > XOR...', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomIn', label='Zoom > In', menu='Image > Zoom > In', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomOut', > label='Zoom Out', menu='Image > Zoom > Out', priority=0.0, enabled=true, > pluginType=Command > >>> [DEBUG] - > class='net.imagej.ui.swing.script.TextEditor$BeanshellHighlighter', > label='beanshell', priority=0.0, enabled=true, pluginType=SyntaxHighlighter > >>> [DEBUG] - > class='net.imagej.ui.swing.script.TextEditor$ECMAScriptHighlighter', > label='ecmascript', priority=0.0, enabled=true, pluginType=SyntaxHighlighter > >>> [DEBUG] - > class='net.imagej.ui.swing.script.TextEditor$IJ1MacroHighlighter', > label='ij1-macro', priority=0.0, enabled=true, pluginType=SyntaxHighlighter > >>> [DEBUG] - > class='net.imagej.ui.swing.script.TextEditor$MatlabHighlighter', > label='matlab', priority=0.0, enabled=true, pluginType=SyntaxHighlighter > >>> [DEBUG] - class='net.imagej.plugins.commands.app.EasterEgg', label='| > It's a secret to everyone |', priority=0.0, enabled=true, pluginType=Command > >>> [DEBUG] - class='io.scif.formats.APNGFormat', name='Animated PNG', > priority=0.0, enabled=true, pluginType=Format > >>> [DEBUG] - class='io.scif.img.converters.ArrayDataAccessConverter', > name='ArrayDataAccess', priority=0.0, enabled=true, > pluginType=PlaneConverter > >>> [DEBUG] - class='io.scif.formats.AVIFormat', name='Audio Video > Interleave', priority=0.0, enabled=true, pluginType=Format > >>> [DEBUG] - class='net.imagej.plugins.tools.AxisPositionHandler', > name='Axis Position Shortcuts', priority=0.0, enabled=true, pluginType=Tool > >>> [DEBUG] - > class='org.scijava.plugins.scripting.beanshell.BeanshellScriptLanguage', > name='BeanShell', priority=0.0, enabled=true, pluginType=ScriptLanguage > >>> [DEBUG] - > class='org.scijava.plugins.scripting.clojure.ClojureScriptLanguage', > name='Clojure', priority=0.0, enabled=true, pluginType=ScriptLanguage > >>> [DEBUG] - > class='net.imagej.autoscale.ConfidenceIntervalAutoscaleMethod', > name='Confidence Interval', priority=0.0, enabled=true, > pluginType=AutoscaleMethod > >>> [DEBUG] - class='net.imagej.plugins.tools.ContextMenuHandler', > name='Context Menus', priority=0.0, enabled=true, pluginType=Tool > >>> [DEBUG] - class='io.scif.formats.DICOMFormat', name='DICOM', > priority=0.0, enabled=true, pluginType=Format > >>> [DEBUG] - class='net.imagej.autoscale.DefaultAutoscaleMethod', > name='Default', priority=0.0, enabled=true, pluginType=AutoscaleMethod > >>> [DEBUG] - class='net.imagej.threshold.DefaultThresholdMethod', > name='Default', priority=0.0, enabled=true, pluginType=ThresholdMethod > >>> [DEBUG] - class='io.scif.img.converters.RandomAccessConverter', > name='Default', priority=0.0, enabled=true, pluginType=PlaneConverter > >>> [DEBUG] - class='io.scif.formats.EPSFormat', name='Encapsulated > PostScript', priority=0.0, enabled=true, pluginType=Format > >>> [DEBUG] - class='io.scif.formats.FITSFormat', name='Flexible Image > Transport System', priority=0.0, enabled=true, pluginType=Format > >>> [DEBUG] - class='io.scif.formats.GIFFormat', name='Graphics > Interchange Format', priority=0.0, enabled=true, pluginType=Format > >>> [DEBUG] - > class='org.scijava.plugins.scripting.groovy.GroovyScriptLanguage', > name='Groovy', priority=0.0, enabled=true, pluginType=ScriptLanguage > >>> [DEBUG] - class='net.imagej.threshold.HuangThresholdMethod', > name='Huang', priority=0.0, enabled=true, pluginType=ThresholdMethod > >>> [DEBUG] - class='net.imagej.legacy.plugin.IJ1MacroLanguage', name='IJ1 > Macro', priority=0.0, enabled=true, pluginType=ScriptLanguage > >>> [DEBUG] - class='io.scif.formats.ICSFormat', name='Image Cytometry > Standard', priority=0.0, enabled=true, pluginType=Format > >>> [DEBUG] - class='net.imagej.legacy.LegacyImageJApp', name='ImageJ1', > priority=0.0, enabled=true, pluginType=App > >>> [DEBUG] - class='net.imagej.threshold.IntermodesThresholdMethod', > name='Intermodes', priority=0.0, enabled=true, pluginType=ThresholdMethod > >>> [DEBUG] - class='net.imagej.threshold.IsoDataThresholdMethod', > name='IsoData', priority=0.0, enabled=true, pluginType=ThresholdMethod > >>> [DEBUG] - class='io.scif.formats.JPEGFormat', name='JPEG', > priority=0.0, enabled=true, pluginType=Format > >>> [DEBUG] - class='io.scif.formats.JPEG2000Format', name='JPEG-2000', > priority=0.0, enabled=true, pluginType=Format > >>> [DEBUG] - > class='org.scijava.plugins.scripting.java.JavaScriptLanguage', name='Java', > priority=0.0, enabled=true, pluginType=ScriptLanguage > >>> [DEBUG] - class='io.scif.formats.JavaFormat', name='Java source code', > priority=0.0, enabled=true, pluginType=Format > >>> [DEBUG] - > class='org.scijava.plugins.scripting.javascript.JavaScriptScriptLanguage', > name='JavaScript', priority=0.0, enabled=true, pluginType=ScriptLanguage > >>> [DEBUG] - class='net.imagej.threshold.LiThresholdMethod', name='Li', > priority=0.0, enabled=true, pluginType=ThresholdMethod > >>> [DEBUG] - class='org.scijava.plugins.platforms.macosx.MacOSXPlatform', > name='Mac OS X', priority=0.0, enabled=true, pluginType=Platform > >>> [DEBUG] - class='net.imagej.threshold.MaxEntropyThresholdMethod', > name='MaxEntropy', priority=0.0, enabled=true, pluginType=ThresholdMethod > >>> [DEBUG] - class='net.imagej.threshold.MaxLikelihoodThresholdMethod', > name='MaxLikelihood', priority=0.0, enabled=true, pluginType=ThresholdMethod > >>> [DEBUG] - class='net.imagej.threshold.MeanThresholdMethod', > name='Mean', priority=0.0, enabled=true, pluginType=ThresholdMethod > >>> [DEBUG] - class='io.scif.formats.MicromanagerFormat', > name='Micro-Manager', priority=0.0, enabled=true, pluginType=Format > >>> [DEBUG] - class='net.imagej.threshold.MinErrorThresholdMethod', > name='MinError(I)', priority=0.0, enabled=true, pluginType=ThresholdMethod > >>> [DEBUG] - class='net.imagej.threshold.MinimumThresholdMethod', > name='Minimum', priority=0.0, enabled=true, pluginType=ThresholdMethod > >>> [DEBUG] - class='net.imagej.threshold.MomentsThresholdMethod', > name='Moments', priority=0.0, enabled=true, pluginType=ThresholdMethod > >>> [DEBUG] - class='io.scif.formats.MNGFormat', name='Multiple Network > Graphics', priority=0.0, enabled=true, pluginType=Format > >>> [DEBUG] - class='io.scif.formats.NRRDFormat', name='NRRD', > priority=0.0, enabled=true, pluginType=Format > >>> [DEBUG] - class='io.scif.formats.OBFFormat', name='OBF', priority=0.0, > enabled=true, pluginType=Format > >>> [DEBUG] - class='net.imagej.threshold.OtsuThresholdMethod', > name='Otsu', priority=0.0, enabled=true, pluginType=ThresholdMethod > >>> [DEBUG] - class='io.scif.formats.PCXFormat', name='PCX', priority=0.0, > enabled=true, pluginType=Format > >>> [DEBUG] - class='io.scif.formats.qt.PICTFormat', name='PICT', > priority=0.0, enabled=true, pluginType=Format > >>> [DEBUG] - class='net.imagej.plugins.tools.PanActivator', name='Pan > Activator', priority=0.0, enabled=true, pluginType=Tool > >>> [DEBUG] - class='net.imagej.threshold.PercentileThresholdMethod', > name='Percentile', priority=0.0, enabled=true, pluginType=ThresholdMethod > >>> [DEBUG] - class='io.scif.img.converters.PlanarAccessConverter', > name='PlanarAccess', priority=0.0, enabled=true, pluginType=PlaneConverter > >>> [DEBUG] - class='io.scif.formats.PGMFormat', name='Portable Gray Map', > priority=0.0, enabled=true, pluginType=Format > >>> [DEBUG] - class='net.imagej.plugins.tools.PixelProbe', name='Probe', > priority=0.0, enabled=true, pluginType=Tool > >>> [DEBUG] - > class='org.scijava.plugins.scripting.jython.JythonScriptLanguage', > name='Python', priority=0.0, enabled=true, pluginType=ScriptLanguage > >>> [DEBUG] - class='io.scif.formats.qt.NativeQTFormat', name='QuickTime', > priority=0.0, enabled=true, pluginType=Format > >>> [DEBUG] - class='net.imagej.threshold.RenyiEntropyThresholdMethod', > name='RenyiEntropy', priority=0.0, enabled=true, pluginType=ThresholdMethod > >>> [DEBUG] - > class='org.scijava.plugins.scripting.jruby.JRubyScriptLanguage', > name='Ruby', priority=0.0, enabled=true, pluginType=ScriptLanguage > >>> [DEBUG] - class='io.scif.app.SCIFIOApp', name='SCIFIO', priority=0.0, > enabled=true, pluginType=App > >>> [DEBUG] - class='net.imagej.threshold.ShanbhagThresholdMethod', > name='Shanbhag', priority=0.0, enabled=true, pluginType=ThresholdMethod > >>> [DEBUG] - class='io.scif.formats.FakeFormat', name='Simulated data', > priority=0.0, enabled=true, pluginType=Format > >>> [DEBUG] - class='io.scif.formats.TextFormat', name='Text', > priority=0.0, enabled=true, pluginType=Format > >>> [DEBUG] - class='net.imagej.threshold.TriangleThresholdMethod', > name='Triangle', priority=0.0, enabled=true, pluginType=ThresholdMethod > >>> [DEBUG] - class='net.imagej.plugins.tools.FocusHandler', name='Window > Focus', priority=0.0, enabled=true, pluginType=Tool > >>> [DEBUG] - > class='org.scijava.plugins.platforms.windows.WindowsPlatform', > name='Windows', priority=0.0, enabled=true, pluginType=Platform > >>> [DEBUG] - class='io.scif.formats.BMPFormat', name='Windows Bitmap', > priority=0.0, enabled=true, pluginType=Format > >>> [DEBUG] - class='net.imagej.threshold.YenThresholdMethod', name='Yen', > priority=0.0, enabled=true, pluginType=ThresholdMethod > >>> [DEBUG] - class='io.scif.formats.ZipFormat', name='Zip', priority=0.0, > enabled=true, pluginType=Format > >>> [DEBUG] - class='net.imagej.plugins.tools.ZoomHandler', name='Zoom > Shortcuts', priority=0.0, enabled=true, pluginType=Tool > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealAbs', > name='abs', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.arithmetic.add.AddConstantToImageInPlace', > name='add', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.arithmetic.add.AddRandomAccessibleIntervalToIterableInterval', > name='add', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.arithmetic.add.AddConstantToPlanarDoubleImage', > name='add', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealAddConstant', > name='addconstant', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealAddNoise', > name='addnoise', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealAndConstant', > name='andconstant', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccos', > name='arccos', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealArccosh', > name='arccosh', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccot', > name='arccot', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealArccoth', > name='arccoth', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccsc', > name='arccsc', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealArccsch', > name='arccsch', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArcsec', > name='arcsec', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealArcsech', > name='arcsech', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArcsin', > name='arcsin', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealArcsinh', > name='arcsinh', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArctan', > name='arctan', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealArctanh', > name='arctanh', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.ascii.DefaultASCII', name='ascii', > priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCeil', > name='ceil', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.chunker.DefaultChunker', > name='chunker', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealConstant', > name='constant', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.convert.ConvertPixClip', > name='convert', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.convert.ConvertII', name='convert', > priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.convert.ConvertPixNormalizeScale', > name='convert', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.convert.ConvertPixScale', > name='convert', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.convert.ConvertPixCopy', > name='convert', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.convolve.ConvolveNaive', > name='convolve', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.convolve.ConvolveFourier', > name='convolve', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCopy', > name='copy', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCos', > name='cos', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCosh', > name='cosh', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCot', > name='cot', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCoth', > name='coth', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.create.CreateArrayImg', name='create', > priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCsc', > name='csc', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCsch', > name='csch', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealCubeRoot', > name='cuberoot', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealDivideConstant', > name='divideconstant', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.equation.DefaultEquation', > name='equation', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealExp', > name='exp', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealExpMinusOne', > name='expminusone', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealFloor', > name='floor', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealGammaConstant', > name='gammaconstant', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.gauss.GaussRAI2RAI', name='gauss', > priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealGaussianRandom', > name='gaussianrandom', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.identity.DefaultIdentity', > name='identity', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealInvert', > name='invert', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinInplaceAndInplace', > name='join', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinInplaceAndFunction', > name='join', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinFunctionAndFunction', > name='join', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinInplaceFunctions', > name='join', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinFunctionAndInplace', > name='join', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinFunctions', > name='join', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealLog', > name='log', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealLog10', > name='log10', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealLog2', > name='log2', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealLogOnePlusX', > name='logoneplusx', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.lookup.DefaultLookup', name='lookup', > aliases='op', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.loop.DefaultLoopInplace', name='loop', > priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.loop.DefaultLoopFunction', > name='loop', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.threshold.Manual', > name='manualthreshold', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.map.MapRA2View', name='map', > priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.map.MapRAI2View', name='map', > priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.map.MapII2View', name='map', > priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealMaxConstant', > name='maxconstant', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealMinConstant', > name='minconstant', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.misc.MinMaxRealType', name='minmax', > priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.statistics.moments.Moment2AboutMean', > name='moment1aboutmean', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.statistics.moments.Moment1AboutMean', > name='moment1aboutmean', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealMultiplyConstant', > name='multiplyconstant', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealNearestInt', > name='nearestint', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealNegate', > name='negate', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.normalize.NormalizeRealType', > name='normalize', aliases='norm', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.normalize.NormalizeII', > name='normalize', aliases='norm', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealOrConstant', > name='orconstant', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.threshold.Otsu', name='otsu', > priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealPowerConstant', > name='powerconstant', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealReciprocal', > name='reciprocal', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealRound', > name='round', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.scale.ScaleImg', name='scale', > aliases='norm', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSec', > name='sec', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSech', > name='sech', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSignum', > name='signum', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSin', > name='sin', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSinc', > name='sinc', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSincPi', > name='sincpi', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSinh', > name='sinh', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSqr', > name='sqr', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSqrt', > name='sqrt', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealStep', > name='step', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealSubtractConstant', > name='subtractconstant', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='org.scijava.ui.swing.sdi.SwingSDIUI', name='swing', > priority=0.0, enabled=true, pluginType=UserInterface > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealTan', > name='tan', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealTanh', > name='tanh', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.threshold.PixThreshold', > name='threshold', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.threshold.GlobalThreshold', > name='threshold', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.threshold.LocalThreshold', > name='threshold', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealUlp', > name='ulp', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealUniformRandom', > name='uniformrandom', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - > class='net.imagej.ops.generated.arithmetic.real.RealXorConstant', > name='xorconstant', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealZero', > name='zero', priority=0.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='fiji.plugin.trackmate.tracking.ManualTrackerFactory', > priority=-1.0, enabled=true, pluginType=SpotTrackerFactory > >>> [DEBUG] - class='net.imagej.ops.map.ParallelMap', name='map', > priority=-95.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.map.ParallelMapI2I', name='map', > priority=-97.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.map.ParallelMapI2R', name='map', > priority=-98.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.crop.CropImgPlus', name='crop', > aliases='slice', priority=-99.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.crop.CropLabeling', name='crop', > aliases='slice', priority=-99.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.map.MapII2II', name='map', > priority=-99.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.project.parallel.DefaultProjectP', > name='project', priority=-99.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.statistics.StdDevRealTypeDirect', > name='stddev', priority=-99.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.statistics.VarianceRealTypeDirect', > name='variance', priority=-99.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='org.scijava.ui.dnd.FileDragAndDropHandler', > priority=-100.0, enabled=true, pluginType=DragAndDropHandler > >>> [DEBUG] - class='org.scijava.display.DefaultTextDisplay', > priority=-100.0, enabled=true, pluginType=Display > >>> [DEBUG] - class='org.scijava.log.StderrLogService', priority=-100.0, > enabled=true, pluginType=Service > >>> [DEBUG] - class='org.scijava.platform.DefaultAppEventService', > priority=-100.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.display.DummyScreenCaptureService', > priority=-100.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.render.DummyRenderingService', > priority=-100.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='net.imagej.io.DatasetIOPlugin', priority=-100.0, > enabled=true, pluginType=IOPlugin > >>> [DEBUG] - class='io.scif.formats.APNGFormat$APNGTranslator', > priority=-100.0, enabled=true, pluginType=Translator > >>> [DEBUG] - > class='io.scif.formats.qt.NativeQTFormat$NativeQTTranslator', > priority=-100.0, enabled=true, pluginType=Translator > >>> [DEBUG] - class='io.scif.formats.FakeFormat$FakeTranslator', > priority=-100.0, enabled=true, pluginType=Translator > >>> [DEBUG] - > class='io.scif.formats.MicromanagerFormat$MicromanagerTranslator', > priority=-100.0, enabled=true, pluginType=Translator > >>> [DEBUG] - class='io.scif.services.DefaultInitializeService', > priority=-100.0, enabled=true, pluginType=Service > >>> [DEBUG] - class='io.scif.formats.AVIFormat$Translator', > priority=-100.0, enabled=true, pluginType=Translator > >>> [DEBUG] - class='io.scif.formats.ICSFormat$ICSTranslator', > priority=-100.0, enabled=true, pluginType=Translator > >>> [DEBUG] - class='io.scif.formats.EPSFormat$EPSTranslator', > priority=-100.0, enabled=true, pluginType=Translator > >>> [DEBUG] - class='io.scif.formats.ImageIOFormat$ImageIOTranslator', > priority=-100.0, enabled=true, pluginType=Translator > >>> [DEBUG] - > class='io.scif.formats.qt.LegacyQTFormat$LegacyQTTranslator', > priority=-100.0, enabled=true, pluginType=Translator > >>> [DEBUG] - class='net.imagej.legacy.plugin.DefaultLegacyOpener', > priority=-100.0, enabled=true, pluginType=LegacyOpener > >>> [DEBUG] - class='net.imagej.legacy.plugin.DefaultLegacyEditor', > priority=-100.0, enabled=true, pluginType=LegacyEditor > >>> [DEBUG] - class='org.scijava.plugins.scripting.java.MainJavaRunner', > priority=-100.0, enabled=true, pluginType=JavaRunner > >>> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat$OMEXMLTranslator', > priority=-100.0, enabled=true, pluginType=Translator > >>> [DEBUG] - class='io.scif.formats.qt.LegacyQTFormat', name='QuickTime', > priority=-100.0, enabled=true, pluginType=Format > >>> [DEBUG] - class='org.scijava.app.SciJavaApp', name='SciJava', > priority=-100.0, enabled=true, pluginType=App > >>> [DEBUG] - class='io.scif.formats.JPEGTileFormat', name='Tile JPEG', > priority=-100.0, enabled=true, pluginType=Format > >>> [DEBUG] - > class='net.imagej.ops.arithmetic.add.AddConstantToNumericType', name='add', > priority=-100.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='org.scijava.ui.awt.AWTUI', name='awt', > priority=-100.0, enabled=true, pluginType=UserInterface > >>> [DEBUG] - class='net.imagej.ops.crop.CropRAI', name='crop', > aliases='slice', priority=-100.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.map.MapII2RAI', name='map', > priority=-100.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.map.MapRAI2III', name='map', > priority=-100.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.map.MapI', name='map', > priority=-100.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.neighborhood.MapNeighborhood', > name='map', priority=-100.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.statistics.MaxRealType', name='max', > priority=-100.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.statistics.MeanRealType', name='mean', > priority=-100.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.statistics.MedianRealType', > name='median', priority=-100.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.statistics.MinRealType', name='min', > priority=-100.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.project.ProjectRAI2II', > name='project', priority=-100.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.misc.SizeIterableInterval', > name='size', priority=-100.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.statistics.StdDevRealType', > name='stddev', priority=-100.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.statistics.SumRealType', name='sum', > priority=-100.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='org.scijava.ui.swing.mdi.SwingMdiUI', > name='swing-mdi', priority=-100.0, enabled=true, pluginType=UserInterface > >>> [DEBUG] - class='net.imagej.ops.statistics.VarianceRealType', > name='variance', priority=-100.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='org.scijava.text.io.TextIOPlugin', priority=-101.0, > enabled=true, pluginType=IOPlugin > >>> [DEBUG] - class='net.imagej.ops.map.MapI2I', name='map', > priority=-101.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.plugins.tools.WandTool', name='Wand', > description='Wand (tracing) tool', iconPath='/icons/tools/wand.png', > priority=-110.0, enabled=false, pluginType=Tool > >>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingTextTool', > name='Text', description='Text tool', iconPath='/icons/tools/text.png', > priority=-115.0, enabled=false, pluginType=Tool > >>> [DEBUG] - class='net.imagej.plugins.tools.ZoomTool', name='Zoom', > description='Magnifying glass (or use "+" and "-" keys)', > iconPath='/icons/tools/zoom.png', priority=-200.0, enabled=true, > pluginType=Tool > >>> [DEBUG] - class='net.imagej.plugins.tools.PanTool', name='Pan', > description='Scrolling tool (or press space bar and drag)', > iconPath='/icons/tools/pan.png', priority=-201.0, enabled=true, > pluginType=Tool > >>> [DEBUG] - class='net.imagej.plugins.tools.PaintBrushTool', > name='Paintbrush', description='Paintbrush Tool', > iconPath='/icons/tools/paintbrush.png', priority=-300.0, enabled=true, > pluginType=Tool > >>> [DEBUG] - class='net.imagej.plugins.tools.PencilTool', name='Pencil', > description='Pencil Tool', iconPath='/icons/tools/pencil.png', > priority=-301.0, enabled=true, pluginType=Tool > >>> [DEBUG] - class='net.imagej.plugins.tools.SprayCanTool', > name='SprayCan', label='Spray Can', description='Spray Can Tool', > iconPath='/icons/tools/spray-can.png', priority=-303.0, enabled=true, > pluginType=Tool > >>> [DEBUG] - class='net.imagej.plugins.tools.FloodFillTool', > name='FloodFill', label='Flood Fill', description='Flood Fill Tool', > iconPath='/icons/tools/flood-fill.png', priority=-304.0, enabled=true, > pluginType=Tool > >>> [DEBUG] - class='net.imagej.plugins.tools.ArrowTool', name='Arrow', > description='Arrow Tool', iconPath='/icons/tools/arrow.png', > priority=-305.0, enabled=false, pluginType=Tool > >>> [DEBUG] - class='net.imagej.plugins.tools.FgColorTool', > name='Foreground', iconPath='/icons/tools/blank.png', priority=-500.0, > enabled=true, pluginType=Tool > >>> [DEBUG] - class='net.imagej.plugins.tools.BgColorTool', > name='Background', iconPath='/icons/tools/blankBlack.png', priority=-501.0, > enabled=true, pluginType=Tool > >>> [DEBUG] - class='io.scif.ome.formats.OMETIFFFormat', priority=-9998.0, > enabled=true, pluginType=Format > >>> [DEBUG] - class='io.scif.ome.formats.OMETIFFFormat$OMETIFFTranslator', > priority=-9998.0, enabled=true, pluginType=Translator > >>> [DEBUG] - class='org.scijava.module.process.LoadInputsPreprocessor', > priority=-9999.0, enabled=true, pluginType=PreprocessorPlugin > >>> [DEBUG] - class='io.scif.formats.TIFFFormat$TIFFTranslator', > priority=-9999.0, enabled=true, pluginType=Translator > >>> [DEBUG] - class='io.scif.formats.TIFFFormat', name='Tagged Image File > Format', priority=-9999.0, enabled=true, pluginType=Format > >>> [DEBUG] - class='org.scijava.ui.FilePreprocessor', priority=-9999.5, > enabled=true, pluginType=PreprocessorPlugin > >>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTInputHarvester', > priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin > >>> [DEBUG] - class='org.scijava.plugins.text.plain.PlainTextFormat', > priority=-10000.0, enabled=true, pluginType=TextFormat > >>> [DEBUG] - class='org.scijava.display.DisplayPostprocessor', > priority=-10000.0, enabled=true, pluginType=PostprocessorPlugin > >>> [DEBUG] - class='io.scif.DefaultTranslator', priority=-10000.0, > enabled=true, pluginType=Translator > >>> [DEBUG] - class='net.imagej.legacy.ui.LegacyInputHarvester', > priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin > >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingInputHarvester', > priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin > >>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingMdiInputHarvester', > priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin > >>> [DEBUG] - class='net.imagej.ui.swing.overlay.DefaultJHotDrawAdapter', > priority=-10000.0, enabled=true, pluginType=JHotDrawAdapter > >>> [DEBUG] - class='org.scijava.platform.DefaultPlatform', > name='Default', priority=-10000.0, enabled=true, pluginType=Platform > >>> [DEBUG] - class='net.imagej.plugins.tools.AcceleratorHandler', > name='Keyboard Shortcuts', priority=-10000.0, enabled=true, pluginType=Tool > >>> [DEBUG] - class='io.scif.formats.MinimalTIFFFormat', name='Minimal > TIFF', priority=-10000.0, enabled=true, pluginType=Format > >>> [DEBUG] - > class='net.imagej.ops.arithmetic.add.AddConstantToImageFunctional', > name='add', priority=-10000.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='net.imagej.ops.chunker.InterleavedChunker', > name='chunker', priority=-10000.0, enabled=true, pluginType=Op > >>> [DEBUG] - class='org.scijava.module.process.CheckInputsPreprocessor', > priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin > >>> [DEBUG] - class='org.scijava.module.process.SaveInputsPreprocessor', > priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin > >>> [DEBUG] - class='io.scif.formats.TIFFJAIFormat', name='Tagged Image > File Format', priority=-10001.0, enabled=true, pluginType=Format > >>> [DEBUG] - class='net.imagej.ops.misc.SizeIterable', name='size', > priority=-Infinity, enabled=true, pluginType=Op > >>> [DEBUG] Created service 'org.scijava.plugin.DefaultPluginService' in > 51 ms > >>> [DEBUG] Creating service: org.scijava.object.DefaultObjectService > >>> log4j:WARN No appenders could be found for logger > (org.bushe.swing.event.EventService). > >>> log4j:WARN Please initialize the log4j system properly. > >>> log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig > for more info. > >>> [DEBUG] Created service 'org.scijava.object.DefaultObjectService' in > 72 ms > >>> [DEBUG] Creating service: org.scijava.module.DefaultModuleService > >>> [DEBUG] Creating service: org.scijava.prefs.DefaultPrefService > >>> [DEBUG] Created service 'org.scijava.prefs.DefaultPrefService' in 4 ms > >>> [DEBUG] Creating service: org.scijava.convert.DefaultConvertService > >>> [DEBUG] Created service 'org.scijava.convert.DefaultConvertService' in > 4 ms > >>> [DEBUG] Created service 'org.scijava.module.DefaultModuleService' in > 14 ms > >>> [DEBUG] Creating service: org.scijava.command.DefaultCommandService > >>> [DEBUG] Created service 'org.scijava.command.DefaultCommandService' in > 36 ms > >>> [DEBUG] Created service 'org.scijava.script.DefaultScriptService' in > 184 ms > >>> [DEBUG] Creating service: net.imagej.lut.DefaultLUTService > >>> [DEBUG] Creating service: net.imagej.DefaultDatasetService > >>> [DEBUG] Creating service: io.scif.services.DefaultFormatService > >>> [DEBUG] Created service 'io.scif.services.DefaultFormatService' in 3 ms > >>> [DEBUG] Creating service: net.imagej.types.DefaultDataTypeService > >>> [INFO] Found 11 DataType plugins. > >>> [DEBUG] Created service 'net.imagej.types.DefaultDataTypeService' in > 40 ms > >>> [DEBUG] Created service 'net.imagej.DefaultDatasetService' in 61 ms > >>> [DEBUG] Creating service: org.scijava.display.DefaultDisplayService > >>> [DEBUG] Created service 'org.scijava.display.DefaultDisplayService' in > 5 ms > >>> [DEBUG] Creating service: net.imagej.display.DefaultImageDisplayService > >>> [DEBUG] Created service > 'net.imagej.display.DefaultImageDisplayService' in 3 ms > >>> [DEBUG] Created service 'net.imagej.lut.DefaultLUTService' in 74 ms > >>> [DEBUG] Creating service: net.imagej.legacy.DefaultLegacyService > >>> [DEBUG] Creating service: net.imagej.display.DefaultOverlayService > >>> [DEBUG] Creating service: org.scijava.options.DefaultOptionsService > >>> [DEBUG] Created service 'org.scijava.options.DefaultOptionsService' in > 2 ms > >>> [DEBUG] Creating service: net.imagej.ui.awt.AWTRenderingService > >>> [DEBUG] Created service 'net.imagej.ui.awt.AWTRenderingService' in 1 ms > >>> [DEBUG] Created service 'net.imagej.display.DefaultOverlayService' in > 10 ms > >>> [DEBUG] Creating service: net.imagej.threshold.DefaultThresholdService > >>> [DEBUG] Created service 'net.imagej.threshold.DefaultThresholdService' > in 4 ms > >>> [DEBUG] Creating service: org.scijava.menu.DefaultMenuService > >>> [DEBUG] Created service 'org.scijava.menu.DefaultMenuService' in 3 ms > >>> [DEBUG] Creating service: org.scijava.app.DefaultStatusService > >>> [DEBUG] Creating service: org.scijava.app.DefaultAppService > >>> [DEBUG] Created service 'org.scijava.app.DefaultAppService' in 4 ms > >>> [DEBUG] Created service 'org.scijava.app.DefaultStatusService' in 5 ms > >>> [INFO] Found 8 ScriptLanguage plugins. > >>> [INFO] Found 0 scripts > >>> [INFO] Overriding Upload Sample Image; identifier: > command:net.imagej.plugins.commands.upload.SampleImageUploader; jar: > file:/opt/Fiji.app/jars/imagej-plugins-commands-0.2.6.jar > >>> [INFO] Overriding Test FlowCam; identifier: > script:/opt/Fiji.app/plugins/FlowCam/Test_FlowCam.ijm; jar: > file:/opt/Fiji.app/jars/scijava-common-2.33.0.jar > >>> [DEBUG] Created service 'net.imagej.legacy.DefaultLegacyService' in > 685 ms > >>> [DEBUG] Creating service: fiji.DefaultFijiService > >>> [DEBUG] Created service 'fiji.DefaultFijiService' in 1 ms > >>> [DEBUG] Creating service: net.imglib2.meta.units.DefaultUnitService > >>> [DEBUG] Created service 'net.imglib2.meta.units.DefaultUnitService' in > 44 ms > >>> [DEBUG] Creating service: net.imagej.ui.awt.AWTScreenCaptureService > >>> [DEBUG] Created service 'net.imagej.ui.awt.AWTScreenCaptureService' in > 2 ms > >>> [DEBUG] Creating service: org.scijava.input.DefaultInputService > >>> [DEBUG] Created service 'org.scijava.input.DefaultInputService' in 6 ms > >>> [DEBUG] Creating service: org.scijava.ui.DefaultUIService > >>> [DEBUG] Creating service: org.scijava.platform.DefaultPlatformService > >>> [DEBUG] Creating service: org.scijava.platform.DefaultAppEventService > >>> [DEBUG] Created service 'org.scijava.platform.DefaultAppEventService' > in 2 ms > >>> [INFO] Found 1 Platform plugins. > >>> [DEBUG] Configuring platform: org.scijava.platform.DefaultPlatform > >>> [DEBUG] Created service 'org.scijava.platform.DefaultPlatformService' > in 11 ms > >>> [DEBUG] Creating service: org.scijava.tool.DefaultToolService > >>> [DEBUG] Created service 'org.scijava.tool.DefaultToolService' in 5 ms > >>> [DEBUG] Created service 'org.scijava.ui.DefaultUIService' in 23 ms > >>> [DEBUG] Creating service: org.scijava.ui.dnd.DefaultDragAndDropService > >>> [DEBUG] Created service 'org.scijava.ui.dnd.DefaultDragAndDropService' > in 5 ms > >>> [DEBUG] Creating service: org.scijava.text.DefaultTextService > >>> [DEBUG] Created service 'org.scijava.text.DefaultTextService' in 3 ms > >>> [DEBUG] Creating service: org.scijava.io.DefaultRecentFileService > >>> [DEBUG] Created service 'org.scijava.io.DefaultRecentFileService' in > 61 ms > >>> [DEBUG] Creating service: org.scijava.io.DefaultIOService > >>> [DEBUG] Created service 'org.scijava.io.DefaultIOService' in 4 ms > >>> [DEBUG] Creating service: org.scijava.widget.DefaultWidgetService > >>> [INFO] Found 22 InputWidget plugins. > >>> [DEBUG] Created service 'org.scijava.widget.DefaultWidgetService' in 6 > ms > >>> [DEBUG] Creating service: org.scijava.welcome.DefaultWelcomeService > >>> [DEBUG] Created service 'org.scijava.welcome.DefaultWelcomeService' in > 2 ms > >>> [DEBUG] Creating service: org.scijava.script.DefaultScriptHeaderService > >>> [DEBUG] Created service > 'org.scijava.script.DefaultScriptHeaderService' in 2 ms > >>> [DEBUG] Creating service: org.scijava.event.DefaultEventHistory > >>> [DEBUG] Created service 'org.scijava.event.DefaultEventHistory' in 2 ms > >>> [DEBUG] Creating service: org.scijava.console.DefaultConsoleService > >>> [DEBUG] Created service 'org.scijava.console.DefaultConsoleService' in > 2 ms > >>> [DEBUG] Creating service: net.imagej.operator.DefaultCalculatorService > >>> [DEBUG] Created service 'net.imagej.operator.DefaultCalculatorService' > in 2 ms > >>> [DEBUG] Creating service: net.imagej.autoscale.DefaultAutoscaleService > >>> [DEBUG] Created service 'net.imagej.autoscale.DefaultAutoscaleService' > in 3 ms > >>> [DEBUG] Creating service: net.imagej.sampler.DefaultSamplerService > >>> [DEBUG] Created service 'net.imagej.sampler.DefaultSamplerService' in > 3 ms > >>> [DEBUG] Creating service: net.imagej.display.DefaultZoomService > >>> [DEBUG] Created service 'net.imagej.display.DefaultZoomService' in 2 ms > >>> [DEBUG] Creating service: net.imagej.display.DefaultWindowService > >>> [DEBUG] Created service 'net.imagej.display.DefaultWindowService' in 2 > ms > >>> [DEBUG] Creating service: net.imagej.DefaultImgPlusService > >>> [DEBUG] Created service 'net.imagej.DefaultImgPlusService' in 1 ms > >>> [DEBUG] Creating service: net.imagej.ui.DefaultImageJUIService > >>> [DEBUG] Created service 'net.imagej.ui.DefaultImageJUIService' in 1 ms > >>> [DEBUG] Creating service: net.imagej.measure.DefaultStatisticsService > >>> [DEBUG] Created service 'net.imagej.measure.DefaultStatisticsService' > in 3 ms > >>> [DEBUG] Creating service: net.imagej.measure.DefaultMeasurementService > >>> [DEBUG] Created service 'net.imagej.measure.DefaultMeasurementService' > in 1 ms > >>> [DEBUG] Creating service: net.imagej.animation.DefaultAnimationService > >>> [DEBUG] Created service 'net.imagej.animation.DefaultAnimationService' > in 4 ms > >>> [DEBUG] Creating service: io.scif.io.DefaultNIOService > >>> [DEBUG] Created service 'io.scif.io.DefaultNIOService' in 2 ms > >>> [DEBUG] Creating service: > io.scif.img.converters.DefaultPlaneConverterService > >>> [DEBUG] Created service > 'io.scif.img.converters.DefaultPlaneConverterService' in 6 ms > >>> [DEBUG] Creating service: io.scif.img.DefaultImgUtilityService > >>> [DEBUG] Created service 'io.scif.img.DefaultImgUtilityService' in 5 ms > >>> [DEBUG] Creating service: io.scif.gui.DefaultGUIService > >>> [DEBUG] Created service 'io.scif.gui.DefaultGUIService' in 3 ms > >>> [DEBUG] Creating service: io.scif.xml.DefaultXMLService > >>> [DEBUG] Created service 'io.scif.xml.DefaultXMLService' in 22 ms > >>> [DEBUG] Creating service: io.scif.refs.DefaultRefManagerService > >>> [DEBUG] Created service 'io.scif.refs.DefaultRefManagerService' in 1 ms > >>> [DEBUG] Creating service: io.scif.services.DefaultTranslatorService > >>> [DEBUG] Created service 'io.scif.services.DefaultTranslatorService' in > 2 ms > >>> [DEBUG] Creating service: io.scif.codec.DefaultCodecService > >>> [DEBUG] Created service 'io.scif.codec.DefaultCodecService' in 1 ms > >>> [DEBUG] Creating service: io.scif.img.cell.cache.MapDBCache > >>> [DEBUG] Created service 'io.scif.img.cell.cache.MapDBCache' in 8 ms > >>> [DEBUG] Creating service: io.scif.DefaultMetadataService > >>> [DEBUG] Created service 'io.scif.DefaultMetadataService' in 0 ms > >>> [DEBUG] Creating service: io.scif.services.DefaultFilePatternService > >>> [DEBUG] Created service 'io.scif.services.DefaultFilePatternService' > in 2 ms > >>> [DEBUG] Creating service: io.scif.formats.tiff.DefaultTiffService > >>> [DEBUG] Created service 'io.scif.formats.tiff.DefaultTiffService' in 3 > ms > >>> [DEBUG] Creating service: io.scif.services.DefaultLocationService > >>> [DEBUG] Created service 'io.scif.services.DefaultLocationService' in 1 > ms > >>> [DEBUG] Creating service: io.scif.services.JAIIIOServiceImpl > >>> [DEBUG] Created service 'io.scif.services.JAIIIOServiceImpl' in 24 ms > >>> [DEBUG] Creating service: io.scif.formats.qt.DefaultQTJavaService > >>> [DEBUG] Created service 'io.scif.formats.qt.DefaultQTJavaService' in 5 > ms > >>> [DEBUG] Creating service: org.scijava.ui.swing.SwingIconService > >>> [DEBUG] Created service 'org.scijava.ui.swing.SwingIconService' in 3 ms > >>> [DEBUG] Creating service: > org.scijava.plugins.scripting.java.DefaultJavaService > >>> [DEBUG] Created service > 'org.scijava.plugins.scripting.java.DefaultJavaService' in 2 ms > >>> [DEBUG] Creating service: net.imagej.ui.swing.overlay.JHotDrawService > >>> [DEBUG] Created service 'net.imagej.ui.swing.overlay.JHotDrawService' > in 3 ms > >>> [DEBUG] Creating service: net.imagej.updater.DefaultUpdateService > >>> [DEBUG] Created service 'net.imagej.updater.DefaultUpdateService' in 7 > ms > >>> [DEBUG] Creating service: net.imagej.updater.DefaultUploaderService > >>> [DEBUG] Created service 'net.imagej.updater.DefaultUploaderService' in > 1 ms > >>> [DEBUG] Creating service: net.imagej.ops.DefaultOpService > >>> [DEBUG] Creating service: net.imagej.ops.DefaultOpMatchingService > >>> [DEBUG] Created service 'net.imagej.ops.DefaultOpMatchingService' in 2 > ms > >>> [DEBUG] Created service 'net.imagej.ops.DefaultOpService' in 5 ms > >>> [DEBUG] Creating service: > net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor > >>> [DEBUG] Created service > 'net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor' in 1 > ms > >>> [DEBUG] Creating service: io.scif.ome.services.DefaultOMEXMLService > >>> [DEBUG] Created service 'io.scif.ome.services.DefaultOMEXMLService' in > 30 ms > >>> [DEBUG] Creating service: > io.scif.ome.services.DefaultOMEMetadataService > >>> [DEBUG] Created service > 'io.scif.ome.services.DefaultOMEMetadataService' in 11 ms > >>> [DEBUG] Creating service: net.imagej.display.DummyScreenCaptureService > >>> [DEBUG] Created service 'net.imagej.display.DummyScreenCaptureService' > in 0 ms > >>> [DEBUG] Creating service: net.imagej.render.DummyRenderingService > >>> [DEBUG] Created service 'net.imagej.render.DummyRenderingService' in 1 > ms > >>> [DEBUG] Creating service: io.scif.services.DefaultInitializeService > >>> [DEBUG] Created service 'io.scif.services.DefaultInitializeService' in > 3 ms > >>> [DEBUG] Received command line arguments: > >>> [DEBUG] publish( > >>> context = org.scijava.Context@7c92eb86 > >>> consumed = false,null,null), called from non-EDT Thread:null > >>> [DEBUG] -port7 > >>> [DEBUG] -macro > >>> [DEBUG] /home/btupper/hello.ijm > >>> [DEBUG] -batch > >>> [INFO] Found 11 ConsoleArgument plugins. > >>> [ERROR] Skipping unsupported option -port7 > >>> [DEBUG] publish( > >>> context = org.scijava.Context@7c92eb86 > >>> consumed = false,null,null), called from non-EDT Thread:null > >>> [INFO] Discovered user interface: net.imagej.legacy.ui.LegacyUI > >>> [INFO] Discovered user interface: org.scijava.ui.swing.sdi.SwingSDIUI > >>> [INFO] Discovered user interface: org.scijava.ui.awt.AWTUI > >>> [INFO] Discovered user interface: org.scijava.ui.swing.mdi.SwingMdiUI > >>> [btupper@fcm-flow ~]$ > >> > >> -- > >> ImageJ mailing list: http://imagej.nih.gov/ij/list.html > > > > -- > ImageJ mailing list: http://imagej.nih.gov/ij/list.html > -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html |
Hi,
Thanks for the info. I'll shall forge ahead. Cheers, Ben On Dec 17, 2014, at 2:05 PM, Mark Hiner <[hidden email]> wrote: > Hi Ben, > > Some additional information on these messages: > >> log4j:WARN No appenders could be found for logger > (org.bushe.swing.event.EventService). > > These log4j warnings come up because, although there is a log4j.jar, there > is no log4j.properties shipped with Fiji by default right now. We have > decided to fix that by creating a new SciJava-config component > <https://github.com/scijava/scijava-config> to bundle configuration files > e.g. for log4j - so eventually these warnings will go away. To my > knowledge, the warnings just indicate that you won't see log statements > emitted by the EventService class in particular. > >> [ERROR] Skipping unsupported option -port7 > > There is an issue open <https://github.com/imagej/imagej/issues/98> > tracking this error. It should only be an actual problem if you will rely > on the SingleInstanceListener functionality, restricting Fiji to one > instance open at a time - otherwise I don't think it will affect you. If it > does become a problem though, adding your feedback to that issue would be > very helpful! > > Best, > Mark > > On Tue, Dec 16, 2014 at 9:05 PM, Ben Tupper <[hidden email]> wrote: > >> On Dec 16, 2014, at 9:43 PM, Ben Tupper <[hidden email]> wrote: >> >>> >>> On Dec 16, 2014, at 7:19 PM, Rasband, Wayne (NIH/NIMH) [E] < >> [hidden email]> wrote: >>> >>>> On Dec 16, 2014, at 3:11 PM, Ben Tupper <[hidden email]> wrote: >>>>> >>>>> Hello, >>>>> >>>>> I'm learning to use Fiji in a headless CentOS 6 environment. I first >> updated fiji using... >>>>> >>>>> $ fiji --update update >>>>> >>>>> >>>>> I have a simple macro, '~/hello.ijm', adapted from this one... >> http://rsb.info.nih.gov/ij/macros/SaveTextFileDemo.txt >>>>> >>>>> // >>>>> //START ~/hello.ijm >>>>> // >>>>> f = File.open("/home/btupper/hello.txt"); >>>>> // use d2s() function (double to string) to specify decimal places >>>>> for (i=0; i<=2*PI; i+=0.01) >>>>> print(f, d2s(i,6) + " \t" + d2s(sin(i),6) + " \t" + d2s(cos(i),6)); >>>>> // >>>>> //FINISH ~/hello.ijm >>>>> // >>>>> >>>>> I then run the macro from the command line. The macro successfully >> creates and populates the '~/hello.txt' file. However, I get log4j >> warnings and an error as shown below. (Note, I have pasted in below the >> entire output when I set the --debug flag.) >>>> >>>> You should report this bug using Fiji’s Help>Report a Bug command. The >> bug report will automatically provide more information about your setup and >> it will help the Fiji developers keep track of your bug report so that it >> is not forgotten. http://imagej.net/Bugs >>>> >> >> >> It appears that this is identical to an existing bug report: >> http://fiji.sc/bugzilla/show_bug.cgi?id=961 >> >> I have been away from ImageJ for so long - I am astounded by the changes >> and still a bit lost. >> >> Cheers, >> Ben >> >> >> >> >> >>>> -wayne >>>> >>>>> [btupper@fcm-flow ~]$ fiji --headless -macro /home/btupper/hello.ijm >>>>> log4j:WARN No appenders could be found for logger >> (org.bushe.swing.event.EventService). >>>>> log4j:WARN Please initialize the log4j system properly. >>>>> log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig >> for more info. >>>>> [ERROR] Skipping unsupported option -port7 >>>>> >>>>> Here is a bit more info about the Fiji installation. >>>>> >>>>> [btupper@fcm-flow ~]$ fiji --print-java-home >>>>> /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24/ >>>>> [btupper@fcm-flow ~]$ fiji --print-ij-dir >>>>> /opt/Fiji.app >>>>> >>>>> >>>>> Do I need to worry about the warnings? I can't locate any >> instructions for initializing log4j on the Fiji website. I have found >> these 3rd party instructions [ >> http://www.javabeat.net/baisc-steps-to-configure-log4j-using-xml-and-properties-file/ >> ] but I have no idea if the are appropriate for what Fiji requires. >>>>> >>>>> I also have no idea how to resolve the error. >>>>> >>> >>> Ah - will do. I assumed that it was something in my own setup - I just >> noticed that log4j is distributed with Fiji in the Fiji/jars subdirectory. >>> >>> >>>>> Any suggestions? >>>>> >>>>> Thanks! >>>>> Ben >>>>> >>>>> >>>>> P.S. Below is the command and output with --debug set >>>>> >>>>> [btupper@fcm-flow ~]$ fiji --debug --headless -macro >> /home/btupper/hello.ijm >>>>> Available RAM: 3727MB, using 3/4 of that: 2796MB >>>>> JRE not found in '/opt/Fiji.app/jre' >>>>> JAVA_HOME contains a JRE: >> '/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre' >>>>> Re-executing with correct library lookup path >> (/opt/Fiji.app/lib/linux64:/opt/Fiji.app/mm/linux64) >>>>> Available RAM: 3727MB, using 3/4 of that: 2796MB >>>>> JRE not found in '/opt/Fiji.app/jre' >>>>> JAVA_HOME contains a JRE: >> '/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre' >>>>> Appending missing -batch flag for headless operation. >>>>> java -Dpython.cachedir.skip=true -Dplugins.dir=/opt/Fiji.app -Xmx2796m >> -Djava.awt.headless=true -Dapple.awt.UIElement=true -Xincgc >> -XX:PermSize=128m -Dsun.java.command=ImageJ >> -Djava.class.path=/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar >> -Dimagej.dir=/opt/Fiji.app -Dij.dir=/opt/Fiji.app -Dfiji.dir=/opt/Fiji.app >> -Dfiji.defaultLibPath=lib/amd64/server/libjvm.so >> -Dfiji.executable=/opt/Fiji.app/fiji-linux64 >> -Dij.executable=/opt/Fiji.app/fiji-linux64 >> -Djava.library.path=/opt/Fiji.app/lib/linux64:/opt/Fiji.app/mm/linux64 >> -Dij.debug=true -Dscijava.log.level=debug net.imagej.launcher.ClassLauncher >> -classpath /opt/Fiji.app/jars/ij-1.49m.jar fiji.Main -port7 -macro >> /home/btupper/hello.ijm -batch >>>>> Using JAVA_HOME /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre >>>>> Opening Java library >> /opt/Fiji.app/java/linux-amd64/jdk1.6.0_24//jre/lib/amd64/server/libjvm.so >>>>> Adding option: -Djava.home=/opt/Fiji.app/java/linux-amd64/jdk1.6.0_24/ >>>>> Launching main class fiji.Main with parameters [-port7, -macro, >> /home/btupper/hello.ijm, -batch] >>>>> Class loader = sun.misc.Launcher$AppClassLoader@b92d342 >>>>> ij1.plugin.dirs: null >>>>> $HOME/.plugins: /home/btupper/.plugins does not exist >>>>> Launching main class net.imagej.Main with parameters [-port7, -macro, >> /home/btupper/hello.ijm, -batch] >>>>> Class loader = sun.misc.Launcher$AppClassLoader@b92d342 >>>>> Checking class loader: sun.misc.Launcher$AppClassLoader@b92d342 >>>>> Checking URL: file:/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar >>>>> Not Eclipse because first entry is: >> file:/opt/Fiji.app/jars/imagej-launcher-3.1.6.jar >>>>> [DEBUG] Creating service: org.scijava.event.DefaultEventService >>>>> [DEBUG] Creating service: org.scijava.log.StderrLogService >>>>> [DEBUG] Created service 'org.scijava.log.StderrLogService' in 2 ms >>>>> [DEBUG] Creating service: org.scijava.thread.DefaultThreadService >>>>> [DEBUG] Created service 'org.scijava.thread.DefaultThreadService' in 1 >> ms >>>>> [DEBUG] Created service 'org.scijava.event.DefaultEventService' in 47 >> ms >>>>> [DEBUG] Creating service: org.scijava.script.DefaultScriptService >>>>> [DEBUG] Creating service: org.scijava.plugin.DefaultPluginService >>>>> [INFO] Found 777 plugins. >>>>> [DEBUG] - class='org.scijava.module.process.DebugPreprocessor', >> priority=Infinity, enabled=true, pluginType=PreprocessorPlugin >>>>> [DEBUG] - class='org.scijava.module.process.DebugPostprocessor', >> priority=Infinity, enabled=true, pluginType=PostprocessorPlugin >>>>> [DEBUG] - class='net.imagej.plugins.tools.KonamiHandler', >> name='Konami', priority=Infinity, enabled=true, pluginType=Tool >>>>> [DEBUG] - class='org.scijava.event.DefaultEventService', >> priority=100000.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.module.process.ValidityPreprocessor', >> priority=10001.0, enabled=true, pluginType=PreprocessorPlugin >>>>> [DEBUG] - class='org.scijava.ui.UIPreprocessor', priority=10000.0, >> enabled=true, pluginType=PreprocessorPlugin >>>>> [DEBUG] - class='org.scijava.display.ActiveDisplayPreprocessor', >> priority=10000.0, enabled=true, pluginType=PreprocessorPlugin >>>>> [DEBUG] - class='org.scijava.module.process.GatewayPreprocessor', >> priority=10000.0, enabled=true, pluginType=PreprocessorPlugin >>>>> [DEBUG] - class='org.scijava.module.process.ServicePreprocessor', >> priority=10000.0, enabled=true, pluginType=PreprocessorPlugin >>>>> [DEBUG] - class='net.imagej.display.ActiveImagePreprocessor', >> priority=10000.0, enabled=true, pluginType=PreprocessorPlugin >>>>> [DEBUG] - >> class='net.imagej.legacy.plugin.ActiveImagePlusPreprocessor', >> priority=10000.0, enabled=true, pluginType=PreprocessorPlugin >>>>> [DEBUG] - class='io.scif.bf.BioFormatsFormat', name='Bio-Formats >> Compatibility Format', priority=10000.0, enabled=true, pluginType=Format >>>>> [DEBUG] - class='net.imagej.ops.slicer.SlicewiseRAI2RAI', >> name='slicemapper', priority=10000.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.arithmetic.add.parallel.AddConstantToArrayDoubleImageP', >> name='add', priority=111.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.arithmetic.add.parallel.AddConstantToArrayByteImageP', >> name='add', priority=110.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='io.scif.ome.translators.OMETIFFTranslator$OMEtoOMETIFFTranslator', >> priority=101.0, enabled=true, pluginType=ToOMETranslator >>>>> [DEBUG] - >> class='io.scif.ome.translators.OMETIFFTranslator$OMETIFFtoOMETranslator', >> priority=101.0, enabled=true, pluginType=FromOMETranslator >>>>> [DEBUG] - >> class='io.scif.bf.ome.BioFormatsTranslator$BioFormatsOMETranslator', >> priority=101.0, enabled=true, pluginType=ToOMETranslator >>>>> [DEBUG] - class='net.imagej.app.ToplevelImageJApp', name='ImageJ', >> priority=101.0, enabled=true, pluginType=App >>>>> [DEBUG] - >> class='net.imagej.ops.arithmetic.add.AddConstantToArrayDoubleImage', >> name='add', priority=101.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTMessageWidget', >> priority=100.0, enabled=true, pluginType=InputWidget >>>>> [DEBUG] - class='org.scijava.module.process.InitPreprocessor', >> priority=100.0, enabled=true, pluginType=PreprocessorPlugin >>>>> [DEBUG] - class='org.scijava.script.DefaultScriptService', >> priority=100.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.lut.DefaultLUTService', priority=100.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.legacy.display.LegacyImageDisplayViewer', >> priority=100.0, enabled=true, pluginType=DisplayViewer >>>>> [DEBUG] - class='net.imagej.legacy.display.LegacyTextDisplayViewer', >> priority=100.0, enabled=true, pluginType=DisplayViewer >>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingMessageWidget', >> priority=100.0, enabled=true, pluginType=InputWidget >>>>> [DEBUG] - >> class='net.imagej.ui.swing.overlay.RectangleJHotDrawAdapter', >> priority=100.0, enabled=true, pluginType=JHotDrawAdapter >>>>> [DEBUG] - >> class='net.imagej.ui.swing.overlay.ThresholdJHotDrawAdapter', >> priority=100.0, enabled=true, pluginType=JHotDrawAdapter >>>>> [DEBUG] - >> class='io.scif.ome.translators.BMPTranslator$BMPOMETranslator', >> priority=100.0, enabled=true, pluginType=ToOMETranslator >>>>> [DEBUG] - >> class='io.scif.ome.translators.MicromanagerTranslator$MicromanagerOMETranslator', >> priority=100.0, enabled=true, pluginType=FromOMETranslator >>>>> [DEBUG] - >> class='io.scif.ome.translators.OBFTranslator$OBFOMETranslator', >> priority=100.0, enabled=true, pluginType=ToOMETranslator >>>>> [DEBUG] - >> class='io.scif.ome.translators.TIFFTranslator$TIFFOMETranslator', >> priority=100.0, enabled=true, pluginType=ToOMETranslator >>>>> [DEBUG] - >> class='io.scif.ome.translators.TIFFTranslator$OMETIFFTranslator', >> priority=100.0, enabled=true, pluginType=FromOMETranslator >>>>> [DEBUG] - >> class='io.scif.ome.translators.APNGTranslator$OMEAPNGTranslator', >> priority=100.0, enabled=true, pluginType=FromOMETranslator >>>>> [DEBUG] - >> class='io.scif.ome.translators.APNGTranslator$APNGOMETranslator', >> priority=100.0, enabled=true, pluginType=ToOMETranslator >>>>> [DEBUG] - >> class='io.scif.ome.translators.ICSTranslator$OMEICSTranslator', >> priority=100.0, enabled=true, pluginType=FromOMETranslator >>>>> [DEBUG] - >> class='io.scif.ome.translators.ICSTranslator$ICSOMETranslator', >> priority=100.0, enabled=true, pluginType=ToOMETranslator >>>>> [DEBUG] - >> class='io.scif.ome.translators.DICOMTranslator$DICOMOMETranslator', >> priority=100.0, enabled=true, pluginType=ToOMETranslator >>>>> [DEBUG] - >> class='io.scif.ome.translators.NRRDTranslator$NRRDOMETranslator', >> priority=100.0, enabled=true, pluginType=ToOMETranslator >>>>> [DEBUG] - >> class='io.scif.ome.translators.EPSTranslator$OMEEPSTranslator', >> priority=100.0, enabled=true, pluginType=FromOMETranslator >>>>> [DEBUG] - class='net.imagej.operator.OpAdd', name='Add', >> priority=100.0, enabled=true, pluginType=CalculatorOp >>>>> [DEBUG] - class='net.imagej.app.ImageJApp', name='ImageJ', >> priority=100.0, enabled=true, pluginType=App >>>>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingRectangleTool', >> name='Rectangle', description='Rectangular overlays', >> iconPath='/icons/tools/rectangle.png', priority=100.0, enabled=true, >> pluginType=Tool >>>>> [DEBUG] - >> class='net.imagej.ops.arithmetic.add.AddConstantToArrayByteImage', >> name='add', priority=100.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$AddOp', >> name='add', priority=100.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$DivideOp', >> name='divide', priority=100.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.legacy.ui.LegacyUI', name='legacy', >> priority=100.0, enabled=true, pluginType=UserInterface >>>>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$MultiplyOp', >> name='multiply', priority=100.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.onthefly.ArithmeticOp$SubtractOp', >> name='subtract', priority=100.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ui.swing.overlay.EllipseJHotDrawAdapter', >> priority=99.0, enabled=true, pluginType=JHotDrawAdapter >>>>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingEllipseTool', >> name='Oval', description='Oval selections', >> iconPath='/icons/tools/oval.png', priority=99.0, enabled=true, >> pluginType=Tool >>>>> [DEBUG] - class='net.imagej.operator.OpSubtract', name='Subtract', >> priority=99.0, enabled=true, pluginType=CalculatorOp >>>>> [DEBUG] - >> class='net.imagej.ui.swing.overlay.GeneralPathJHotDrawAdapter', >> priority=98.5, enabled=true, pluginType=JHotDrawAdapter >>>>> [DEBUG] - class='net.imagej.ui.swing.overlay.PolygonJHotDrawAdapter', >> priority=98.0, enabled=true, pluginType=JHotDrawAdapter >>>>> [DEBUG] - class='net.imagej.operator.OpMultiply', name='Multiply', >> priority=98.0, enabled=true, pluginType=CalculatorOp >>>>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPolygonTool', >> name='Polygon', description='Polygon overlays', >> iconPath='/icons/tools/polygon.png', priority=98.0, enabled=true, >> pluginType=Tool >>>>> [DEBUG] - class='net.imagej.ui.swing.overlay.LineJHotDrawAdapter', >> priority=97.0, enabled=true, pluginType=JHotDrawAdapter >>>>> [DEBUG] - class='net.imagej.operator.OpDivide', name='Divide', >> priority=97.0, enabled=true, pluginType=CalculatorOp >>>>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingLineTool', >> name='Line', description='Straight line overlays', >> iconPath='/icons/tools/line.png', priority=97.0, enabled=true, >> pluginType=Tool >>>>> [DEBUG] - class='net.imagej.ui.swing.overlay.PolylineJHotDrawAdapter', >> priority=96.0, enabled=true, pluginType=JHotDrawAdapter >>>>> [DEBUG] - class='net.imagej.operator.OpAnd', name='AND', >> priority=96.0, enabled=true, pluginType=CalculatorOp >>>>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPolylineTool', >> name='Polyline', description='Polyline overlays', >> iconPath='/icons/tools/polyline.png', priority=96.0, enabled=true, >> pluginType=Tool >>>>> [DEBUG] - class='net.imagej.ui.swing.overlay.AngleJHotDrawAdapter', >> priority=95.0, enabled=true, pluginType=JHotDrawAdapter >>>>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingAngleTool', >> name='Angle', description='Angle overlays', >> iconPath='/icons/tools/angle.png', priority=95.0, enabled=true, >> pluginType=Tool >>>>> [DEBUG] - class='net.imagej.operator.OpOr', name='OR', priority=95.0, >> enabled=true, pluginType=CalculatorOp >>>>> [DEBUG] - class='net.imagej.ui.swing.overlay.PointJHotDrawOverlay', >> priority=94.0, enabled=true, pluginType=JHotDrawAdapter >>>>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingPointTool', >> name='Point', description='Point overlays', >> iconPath='/icons/tools/point.png', priority=94.0, enabled=true, >> pluginType=Tool >>>>> [DEBUG] - class='net.imagej.operator.OpXor', name='XOR', >> priority=94.0, enabled=true, pluginType=CalculatorOp >>>>> [DEBUG] - class='net.imagej.operator.OpMin', name='Min', >> priority=93.0, enabled=true, pluginType=CalculatorOp >>>>> [DEBUG] - class='net.imagej.operator.OpMax', name='Max', >> priority=92.0, enabled=true, pluginType=CalculatorOp >>>>> [DEBUG] - class='net.imagej.operator.OpAverage', name='Average', >> priority=91.0, enabled=true, pluginType=CalculatorOp >>>>> [DEBUG] - class='net.imagej.operator.OpDifference', name='Difference', >> priority=90.0, enabled=true, pluginType=CalculatorOp >>>>> [DEBUG] - class='net.imagej.operator.OpCopy', name='Copy', >> priority=89.0, enabled=true, pluginType=CalculatorOp >>>>> [DEBUG] - class='net.imagej.operator.OpTransparentZero', >> name='Transparent-zero', priority=88.0, enabled=true, >> pluginType=CalculatorOp >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.tracking.oldlap.FastLAPTrackerFactory', >> priority=10.0, enabled=true, pluginType=SpotTrackerFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.tracking.oldlap.SimpleFastLAPTrackerFactory', >> priority=10.0, enabled=true, pluginType=SpotTrackerFactory >>>>> [DEBUG] - class='net.imagej.legacy.DefaultLegacyService', >> priority=1.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingChoiceRadioWidget', >> priority=1.0, enabled=true, pluginType=InputWidget >>>>> [DEBUG] - class='net.imagej.ops.onthefly.JavassistOptimizer', >> priority=1.0, enabled=true, pluginType=Optimizer >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.visualization.threedviewer.SpotDisplayer3DFactory', >> priority=1.0, enabled=true, pluginType=ViewFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.tracking.kdtree.NearestNeighborTrackerFactory', >> priority=1.0, enabled=true, pluginType=SpotTrackerFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.features.spot.SpotContrastAndSNRAnalyzerFactory', >> priority=1.0, enabled=true, pluginType=SpotAnalyzerFactory >>>>> [DEBUG] - class='net.imagej.ops.invert.InvertII', name='invert', >> priority=1.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToDouble', >> name='add', priority=0.6, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToLong', >> name='add', priority=0.5, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToFloat', >> name='add', priority=0.4, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToInteger', >> name='add', priority=0.3, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToShort', >> name='add', priority=0.2, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.AddConstantToByte', >> name='add', priority=0.1, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.assign.AndDataValuesWith', menu='Process >>> Math > AND...', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.app.AboutImageJ', label='About ImageJ...', >> menu='Help > About ImageJ...', iconPath='/icons/commands/information.png', >> priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.AbsDataValues', >> menu='Process > Math > Abs...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionAdaptiveMedian', >> menu='Process > Noise > Noise Reduction > Adaptive Median', priority=0.0, >> enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.AddAxis', >> menu='Image > Axes > Add Axis...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.AddData', >> menu='Image > Data > Add Data...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.overlay.AddImage', >> menu='Image > Overlay > Add Image', iconPath='/icons/commands/bricks.png', >> priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.assign.AddNoiseToDataValues', >> menu='Process > Noise > Add Noise...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.assign.AddSpecifiedNoiseToDataValues', >> menu='Process > Noise > Add Specified Noise...', priority=0.0, >> enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.AddToDataValues', >> menu='Process > Math > Add...', iconPath='/icons/commands/sum.png', >> priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionAlphaTrimmedMean', >> menu='Process > Noise > Noise Reduction > Alpha Trimmed Mean', >> priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.animation.AnimationOptions', menu='Image >>> Animation > Animation Options...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.options.OptionsAppearance', menu='Edit > >> Options > Appearance...', priority=0.0, enabled=true, >> pluginType=OptionsPlugin >>>>> [DEBUG] - class='net.imagej.ops.commands.threshold.GlobalThresholder', >> menu='Image > Threshold > Apply Threshold', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.options.OptionsArrowTool', menu='Edit > >> Options > Arrow Tool...', priority=0.0, enabled=true, >> pluginType=OptionsPlugin >>>>> [DEBUG] - class='net.imagej.plugins.commands.display.AutoContrast', >> menu='Image > Adjust > Auto-Contrast', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.axispos.AxisPositionBackward', >> menu='Image > Axes > Axis Position Backward', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.axispos.AxisPositionForward', >> menu='Image > Axes > Axis Position Forward', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.misc.Benchmark', >> menu='Plugins > Utilities > Benchmark', >> iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.Binner', >> menu='Image > Transform > Bin...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.binary.Binarize', >> menu='Process > Binary > Binarize...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.display.interactive.BrightnessContrast', >> menu='Image > Adjust > Brightness/Contrast...', >> iconPath='/icons/commands/contrast.png', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.debug.ButtonDemo', >> menu='Plugins > Sandbox > Button Demo', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.display.CaptureImage', >> menu='Plugins > Utilities > Capture Image', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.display.CaptureScreen', >> menu='Plugins > Utilities > Capture Screen', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.typechange.TypeChanger', >> menu='Image > Type > Change...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.display.ChannelsTool', >> menu='Image > Color > Channels Tool...', >> iconPath='/icons/commands/color_wheel.png', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.options.OptionsChannels', menu='Edit > >> Options > Channels...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>>>> [DEBUG] - class='org.scijava.plugins.commands.io.ClearRecent', >> label='Clear Recent', menu='File > Open Recent > Clear List', priority=0.0, >> enabled=true, pluginType=Command >>>>> [DEBUG] - class='org.scijava.plugins.commands.display.Close', >> menu='File > Close', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.binary.CloseBinaryImage', >> menu='Process > Binary > Close', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='org.scijava.plugins.commands.display.CloseAll', >> menu='File > Close All', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.options.OptionsCompatibility', menu='Edit >>> Options > Compatibility...', priority=0.0, enabled=true, >> pluginType=OptionsPlugin >>>>> [DEBUG] - class='net.imagej.options.OptionsCompiler', menu='Edit > >> Options > Compiler...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionContraharmonicMean', >> menu='Process > Noise > Noise Reduction > Contraharmonic Mean', >> priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.options.OptionsConversions', menu='Edit > >> Options > Conversions...', priority=0.0, enabled=true, >> pluginType=OptionsPlugin >>>>> [DEBUG] - class='net.imagej.ops.commands.convert.ConvertImgPlus', >> menu='Image > Convert', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.ops.commands.convolve.Convolve', >> menu='Image > Convolve', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.app.CopyToSystem', >> menu='Edit > Copy To System', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.binary.CreateMask', >> menu='Process > Binary > Create Mask...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.app.CreateShortcut', >> menu='Plugins > Shortcuts > Create Shortcut...', >> iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.CropImage', >> menu='Image > Crop', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.options.OptionsDicom', menu='Edit > >> Options > DICOM...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>>>> [DEBUG] - class='net.imagej.options.OptionsOverlay', label='Default >> Overlay Settings', menu='Image > Overlay > Overlay Options...', >> priority=0.0, enabled=true, pluginType=OptionsPlugin >>>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.DeleteAxis', >> menu='Image > Axes > Delete Axis...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.DeleteData', >> menu='Image > Data > Delete Data...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.display.interactive.DeleteThreshold', >> menu='Image > Adjust > Delete Threshold', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.display.DeselectOverlays', menu='Edit > >> Selection > Deselect Overlays', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='org.scijava.ui.swing.commands.DialogPromptDemo', >> menu='Plugins > Sandbox > Dialog Prompt Demo', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.binary.DilateBinaryImage', menu='Process >>> Binary > Dilate', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.assign.DivideDataValuesBy', >> menu='Process > Math > Divide...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='org.scijava.plugins.commands.debug.DumpStack', >> menu='Plugins > Debug > Dump Stack', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.DuplicateImage', >> menu='Image > Duplicate', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.imglib.DuplicateImageContext', >> menu='Duplicate...', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsEast', >> menu='Process > Shadows > East', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.EditAxes', >> menu='Image > Axes > Edit Axes...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.assign.EquationDataValues', >> menu='Process > Math > Equation...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.binary.ErodeBinaryImage', >> menu='Process > Binary > Erode', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.ExpDataValues', >> menu='Process > Math > Exp...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.FillDataValues', >> menu='Edit > Fill', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='org.scijava.ui.swing.commands.CommandFinder', >> menu='Plugins > Utilities > Find Commands...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.neigh.FindEdges', >> menu='Process > Find Edges', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.display.Flatten', >> menu='Image > Overlay > Flatten', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.FlipAxis', >> menu='Image > Transform > Flip Axis', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.rotate.FlipHorizontally', >> menu='Image > Transform > Flip Horizontally', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.rotate.FlipVertically', >> menu='Image > Transform > Flip Vertically', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.tools.FloodFillToolConfig', >> label='Flood Fill Tool', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.options.OptionsFont', menu='Edit > Options >>> Fonts...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.overlay.FromOverlayManager', menu='Image >>> Overlay > From Overlay Manager', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.GammaDataValues', >> menu='Process > Math > Gamma...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.GaussianBlur', >> menu='Process > Filters > Gaussian Blur...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionGeometricMean', >> menu='Process > Noise > Noise Reduction > Geometric Mean', priority=0.0, >> enabled=true, pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionHarmonicMean', >> menu='Process > Noise > Noise Reduction > Harmonic Mean', priority=0.0, >> enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.display.HistogramPlot', >> menu='Analyze > Histogram Plot', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.calculator.ImageCalculator', >> menu='Process > Image Calculator...', >> iconPath='/icons/commands/calculator.png', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.io.OpenDataset', >> menu='File > Import > Image... ', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.io.SaveDataset', >> menu='File > Export > Image... ', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.app.ImageJWebsite', >> menu='Help > ImageJ Website...', iconPath='/icons/commands/world_link.png', >> priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.legacy.ImageJ2Options', label='ImageJ2 >> Options', menu='Edit > Options > ImageJ2...', priority=0.0, enabled=true, >> pluginType=OptionsPlugin >>>>> [DEBUG] - class='net.imagej.options.OptionsInputOutput', menu='Edit > >> Options > Input/Output...', priority=0.0, enabled=true, >> pluginType=OptionsPlugin >>>>> [DEBUG] - class='net.imagej.plugins.commands.debug.InspectImg', >> menu='Plugins > Debug > Inspect Image', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='org.scijava.ui.swing.commands.InspectObjects', >> menu='Plugins > Debug > Inspect Objects', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='org.scijava.plugins.commands.debug.InvalidCommandDemo$InvalidCommand', >> menu='Plugins > Debug > Invalid Command', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.InvertDataValues', >> menu='Edit > Invert...', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.lut.LUTSelector', label='LUT Selector', >> menu='Image > Lookup Tables > Select...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.overlay.OverlayLabels', >> menu='Image > Overlay > Labels...', iconPath='/icons/commands/bricks.png', >> priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.options.OptionsLineWidth', menu='Edit > >> Options > Line Width...', priority=0.0, enabled=true, >> pluginType=OptionsPlugin >>>>> [DEBUG] - class='net.imagej.plugins.commands.app.ListShortcuts', >> menu='Plugins > Shortcuts > List Shortcuts...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.LogDataValues', >> menu='Process > Math > Log...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='org.scijava.ui.swing.options.OptionsLookAndFeel', >> menu='Edit > Options > Look and Feel...', priority=0.0, enabled=true, >> pluginType=OptionsPlugin >>>>> [DEBUG] - class='net.imagej.plugins.commands.binary.MakeBinary', >> menu='Process > Binary > Make Binary...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.overlay.ConvertToMask', >> menu='Process > Binary > Make Mask Overlay...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.debug.MandelbrotSetImage', menu='Plugins >>> Sandbox > Mandelbrot Set', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.MaxDataValues', >> menu='Process > Math > Max...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMax', >> menu='Process > Noise > Noise Reduction > Maximum', priority=0.0, >> enabled=true, pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMean', >> menu='Process > Noise > Noise Reduction > Mean', priority=0.0, >> enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.debug.MeasurementDemo', >> menu='Plugins > Sandbox > Measurement Demo', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMedian', >> menu='Process > Noise > Noise Reduction > Median', priority=0.0, >> enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.options.OptionsMemoryAndThreads', >> menu='Edit > Options > Memory & Threads...', priority=0.0, enabled=true, >> pluginType=OptionsPlugin >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMidpoint', >> menu='Process > Noise > Noise Reduction > Midpoint', priority=0.0, >> enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.MinDataValues', >> menu='Process > Math > Min...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionMin', >> menu='Process > Noise > Noise Reduction > Minimum', priority=0.0, >> enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.options.OptionsMisc', menu='Edit > Options >>> Misc...', priority=0.0, enabled=true, pluginType=OptionsPlugin >>>>> [DEBUG] - class='net.imagej.legacy.plugin.MixedWorldCommand', >> menu='Plugins > Sandbox > Mixed World Command', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.debug.MultidimImage', >> menu='Plugins > Sandbox > Multidimensional Test Image', priority=0.0, >> enabled=true, pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.assign.MultiplyDataValuesBy', >> menu='Process > Math > Multiply...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.NanBackground', >> menu='Process > Math > NaN Background', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.io.NewImage', label='New >> Image...', menu='File > New > Image...', >> iconPath='/icons/commands/picture.png', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsNorth', >> menu='Process > Shadows > North', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.correlate.ShadowsNortheast', >> menu='Process > Shadows > Northeast', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.correlate.ShadowsNorthwest', >> menu='Process > Shadows > Northwest', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.OrDataValuesWith', >> menu='Process > Math > OR...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.binary.OpenBinaryImage', >> menu='Process > Binary > Open', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='org.scijava.plugins.commands.io.OpenFile', menu='File >>> Open...', iconPath='/icons/commands/folder_picture.png', priority=0.0, >> enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomOriginalScale', >> menu='Image > Zoom > Original Scale', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.display.interactive.OrthogonalViews', >> menu='Image > Stacks > Orthogonal Views', >> iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.ui.swing.commands.OverlayManager', >> menu='Image > Overlay > Overlay Manager', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.overlay.OverlayProperties', >> label='Overlay Properties...', menu='Image > Overlay > Properties...', >> priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.tools.PaintBrushToolConfig', >> label='Paintbrush Tool', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='org.scijava.plugins.commands.debug.ParamAssignOrder', >> menu='Plugins > Sandbox > Parameter Assignment Order', priority=0.0, >> enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.tools.PencilToolConfig', >> label='Pencil Tool', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='fiji.DefaultFijiService', priority=0.0, enabled=true, >> pluginType=Service >>>>> [DEBUG] - class='fiji.patches.FijiAppConfiguration', priority=0.0, >> enabled=true, pluginType=LegacyAppConfiguration >>>>> [DEBUG] - class='fiji.patches.OldLegacyEditor', priority=0.0, >> enabled=true, pluginType=LegacyEditor >>>>> [DEBUG] - class='fiji.patches.OldAppConfiguration', priority=0.0, >> enabled=true, pluginType=LegacyAppConfiguration >>>>> [DEBUG] - class='net.imglib2.meta.units.DefaultUnitService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTObjectWidget', >> priority=0.0, enabled=true, pluginType=InputWidget >>>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTToggleWidget', >> priority=0.0, enabled=true, pluginType=InputWidget >>>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTChoiceWidget', >> priority=0.0, enabled=true, pluginType=InputWidget >>>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTNumberWidget', >> priority=0.0, enabled=true, pluginType=InputWidget >>>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTTextWidget', >> priority=0.0, enabled=true, pluginType=InputWidget >>>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTFileWidget', >> priority=0.0, enabled=true, pluginType=InputWidget >>>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTButtonWidget', >> priority=0.0, enabled=true, pluginType=InputWidget >>>>> [DEBUG] - class='net.imagej.plugins.uploaders.ssh.SSHFileUploader', >> priority=0.0, enabled=true, pluginType=Uploader >>>>> [DEBUG] - class='net.imagej.plugins.uploaders.ssh.SFTPFileUploader', >> priority=0.0, enabled=true, pluginType=Uploader >>>>> [DEBUG] - class='net.imagej.plugins.uploaders.webdav.WebDAVUploader', >> priority=0.0, enabled=true, pluginType=Uploader >>>>> [DEBUG] - >> class='org.scijava.plugins.text.markdown.MarkdownTextFormat', priority=0.0, >> enabled=true, pluginType=TextFormat >>>>> [DEBUG] - class='net.imagej.ui.awt.AWTRenderingService', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.ui.awt.AWTScreenCaptureService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.object.DefaultObjectService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.convert.DefaultConverter', priority=0.0, >> enabled=true, pluginType=Converter >>>>> [DEBUG] - class='org.scijava.convert.DefaultConvertService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.input.DefaultInputService', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.ui.DefaultUIService', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.ui.dnd.DefaultDragAndDropService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.ui.dnd.ListDragAndDropHandler', >> priority=0.0, enabled=true, pluginType=DragAndDropHandler >>>>> [DEBUG] - class='org.scijava.ui.dnd.ScriptFileDragAndDropHandler', >> priority=0.0, enabled=true, pluginType=DragAndDropHandler >>>>> [DEBUG] - class='org.scijava.ui.console.UIArgument', priority=0.0, >> enabled=true, pluginType=ConsoleArgument >>>>> [DEBUG] - class='org.scijava.plugin.DefaultPluginService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.text.DefaultTextService', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.display.DefaultDisplayService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.prefs.DefaultPrefService', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.io.DefaultRecentFileService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.io.console.OpenArgument', priority=0.0, >> enabled=true, pluginType=ConsoleArgument >>>>> [DEBUG] - class='org.scijava.io.DefaultIOService', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.widget.DefaultWidgetService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.menu.DefaultMenuService', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.tool.DefaultToolService', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.app.DefaultAppService', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.app.DefaultStatusService', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.module.DefaultModuleService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.welcome.DefaultWelcomeService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.thread.DefaultThreadService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.script.io.ScriptIOPlugin', priority=0.0, >> enabled=true, pluginType=IOPlugin >>>>> [DEBUG] - class='org.scijava.script.DefaultScriptHeaderService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.event.DefaultEventHistory', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.platform.DefaultPlatformService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.options.DefaultOptionsService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.command.DefaultCommandService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.command.console.RunArgument', >> priority=0.0, enabled=true, pluginType=ConsoleArgument >>>>> [DEBUG] - class='org.scijava.console.DefaultConsoleService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.SciJava', priority=0.0, enabled=true, >> pluginType=Gateway >>>>> [DEBUG] - class='net.imagej.operator.DefaultCalculatorService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.autoscale.DefaultAutoscaleService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.sampler.DefaultSamplerService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.lut.io.LUTIOPlugin', priority=0.0, >> enabled=true, pluginType=IOPlugin >>>>> [DEBUG] - class='net.imagej.display.DefaultDatasetView', priority=0.0, >> enabled=true, pluginType=DataView >>>>> [DEBUG] - class='net.imagej.display.DefaultImageDisplay', >> priority=0.0, enabled=true, pluginType=Display >>>>> [DEBUG] - class='net.imagej.display.DefaultZoomService', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.display.DefaultOverlayService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.display.DefaultImageDisplayService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.display.DefaultOverlayView', priority=0.0, >> enabled=true, pluginType=DataView >>>>> [DEBUG] - class='net.imagej.display.DefaultWindowService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.types.DataType32BitSignedFloat', >> priority=0.0, enabled=true, pluginType=DataType >>>>> [DEBUG] - class='net.imagej.types.DataType12BitUnsignedInteger', >> priority=0.0, enabled=true, pluginType=DataType >>>>> [DEBUG] - class='net.imagej.types.DataType64BitSignedFloat', >> priority=0.0, enabled=true, pluginType=DataType >>>>> [DEBUG] - class='net.imagej.types.DataType8BitSignedInteger', >> priority=0.0, enabled=true, pluginType=DataType >>>>> [DEBUG] - class='net.imagej.types.DataType32BitUnsignedInteger', >> priority=0.0, enabled=true, pluginType=DataType >>>>> [DEBUG] - class='net.imagej.types.DataType32BitSignedInteger', >> priority=0.0, enabled=true, pluginType=DataType >>>>> [DEBUG] - class='net.imagej.types.DataType64BitSignedInteger', >> priority=0.0, enabled=true, pluginType=DataType >>>>> [DEBUG] - class='net.imagej.types.DataType16BitSignedInteger', >> priority=0.0, enabled=true, pluginType=DataType >>>>> [DEBUG] - class='net.imagej.types.DataType16BitUnsignedInteger', >> priority=0.0, enabled=true, pluginType=DataType >>>>> [DEBUG] - class='net.imagej.types.DataType1BitUnsignedInteger', >> priority=0.0, enabled=true, pluginType=DataType >>>>> [DEBUG] - class='net.imagej.types.DataType8BitUnsignedInteger', >> priority=0.0, enabled=true, pluginType=DataType >>>>> [DEBUG] - class='net.imagej.types.DefaultDataTypeService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.DefaultImgPlusService', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.minmax.DefaultMinMaxMethod', priority=0.0, >> enabled=true, pluginType=MinMaxMethod >>>>> [DEBUG] - class='net.imagej.ui.DefaultImageJUIService', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.ui.dnd.LUTFileDragAndDropHandler', >> priority=0.0, enabled=true, pluginType=DragAndDropHandler >>>>> [DEBUG] - class='net.imagej.measure.DefaultStatisticsService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.measure.DefaultMeasurementService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.threshold.DefaultThresholdService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.animation.DefaultAnimationService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.table.DefaultTableDisplay', priority=0.0, >> enabled=true, pluginType=Display >>>>> [DEBUG] - class='net.imagej.DefaultDatasetService', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='io.scif.io.URLHandle', priority=0.0, enabled=true, >> pluginType=IStreamAccess >>>>> [DEBUG] - class='io.scif.codec.LZWCodec', priority=0.0, enabled=true, >> pluginType=Codec >>>>> [DEBUG] - class='io.scif.io.DefaultNIOService', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='io.scif.img.converters.DefaultPlaneConverterService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='io.scif.img.cell.SCIFIOCellCacheCleaningProvider', >> priority=0.0, enabled=true, pluginType=RefProvider >>>>> [DEBUG] - class='io.scif.codec.JPEG2000Codec', priority=0.0, >> enabled=true, pluginType=Codec >>>>> [DEBUG] - class='io.scif.img.DefaultImgUtilityService', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='io.scif.gui.DefaultGUIService', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='io.scif.filters.DimensionSwapper', priority=0.0, >> enabled=true, pluginType=Filter >>>>> [DEBUG] - class='io.scif.xml.DefaultXMLService', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='io.scif.codec.HuffmanCodec', priority=0.0, >> enabled=true, pluginType=Codec >>>>> [DEBUG] - class='io.scif.refs.DefaultRefManagerService', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='io.scif.services.DefaultFormatService', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='io.scif.codec.RPZACodec', priority=0.0, enabled=true, >> pluginType=Codec >>>>> [DEBUG] - class='io.scif.codec.MJPBCodec', priority=0.0, enabled=true, >> pluginType=Codec >>>>> [DEBUG] - class='io.scif.codec.PassthroughCodec', priority=0.0, >> enabled=true, pluginType=Codec >>>>> [DEBUG] - class='io.scif.filters.PlaneSeparatorMetadata', >> priority=0.0, enabled=true, pluginType=MetadataWrapper >>>>> [DEBUG] - class='io.scif.filters.ChannelFiller', priority=0.0, >> enabled=true, pluginType=Filter >>>>> [DEBUG] - class='io.scif.codec.PackbitsCodec', priority=0.0, >> enabled=true, pluginType=Codec >>>>> [DEBUG] - class='io.scif.filters.MinMaxFilter', priority=0.0, >> enabled=true, pluginType=Filter >>>>> [DEBUG] - class='io.scif.io.BZip2Handle', priority=0.0, enabled=true, >> pluginType=IStreamAccess >>>>> [DEBUG] - class='io.scif.services.DefaultTranslatorService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='io.scif.img.cell.RefMapCleaningProvider', >> priority=0.0, enabled=true, pluginType=RefProvider >>>>> [DEBUG] - class='io.scif.codec.QTRLECodec', priority=0.0, >> enabled=true, pluginType=Codec >>>>> [DEBUG] - class='io.scif.io.GZipHandle', priority=0.0, enabled=true, >> pluginType=IStreamAccess >>>>> [DEBUG] - class='io.scif.codec.LosslessJPEGCodec', priority=0.0, >> enabled=true, pluginType=Codec >>>>> [DEBUG] - class='io.scif.codec.MSVideoCodec', priority=0.0, >> enabled=true, pluginType=Codec >>>>> [DEBUG] - class='io.scif.filters.PlaneSeparator', priority=0.0, >> enabled=true, pluginType=Filter >>>>> [DEBUG] - class='io.scif.codec.Base64Codec', priority=0.0, >> enabled=true, pluginType=Codec >>>>> [DEBUG] - class='io.scif.SCIFIO', priority=0.0, enabled=true, >> pluginType=Gateway >>>>> [DEBUG] - class='io.scif.codec.DefaultCodecService', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='io.scif.codec.JPEGCodec', priority=0.0, enabled=true, >> pluginType=Codec >>>>> [DEBUG] - class='io.scif.img.ImgPlusCtxCleaningProvider', >> priority=0.0, enabled=true, pluginType=RefProvider >>>>> [DEBUG] - class='io.scif.codec.LuraWaveCodec', priority=0.0, >> enabled=true, pluginType=Codec >>>>> [DEBUG] - class='io.scif.img.cell.SCIFIOCellCleaningProvider', >> priority=0.0, enabled=true, pluginType=RefProvider >>>>> [DEBUG] - class='io.scif.codec.MSRLECodec', priority=0.0, >> enabled=true, pluginType=Codec >>>>> [DEBUG] - class='io.scif.img.cell.cache.MapDBCache', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='io.scif.DefaultMetadataService', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='io.scif.img.cell.SCIFIOCellImgCleaningProvider', >> priority=0.0, enabled=true, pluginType=RefProvider >>>>> [DEBUG] - class='io.scif.filters.FileStitcher', priority=0.0, >> enabled=true, pluginType=Filter >>>>> [DEBUG] - class='io.scif.services.DefaultFilePatternService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='io.scif.io.ZipHandle', priority=0.0, enabled=true, >> pluginType=IStreamAccess >>>>> [DEBUG] - class='io.scif.codec.NikonCodec', priority=0.0, >> enabled=true, pluginType=Codec >>>>> [DEBUG] - class='io.scif.formats.tiff.DefaultTiffService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='io.scif.services.DefaultLocationService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='io.scif.codec.ZlibCodec', priority=0.0, enabled=true, >> pluginType=Codec >>>>> [DEBUG] - class='io.scif.services.JAIIIOServiceImpl', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='io.scif.formats.qt.DefaultQTJavaService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Batch', >> priority=0.0, enabled=true, pluginType=ConsoleArgument >>>>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$IJPath', >> priority=0.0, enabled=true, pluginType=ConsoleArgument >>>>> [DEBUG] - class='net.imagej.legacy.plugin.LegacyAutoImporter', >> priority=0.0, enabled=true, pluginType=AutoImporter >>>>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Macro', >> priority=0.0, enabled=true, pluginType=ConsoleArgument >>>>> [DEBUG] - class='net.imagej.legacy.LegacyJavaRunner', priority=0.0, >> enabled=true, pluginType=JavaRunner >>>>> [DEBUG] - >> class='net.imagej.legacy.display.DefaultImagePlusDisplayViewer', >> priority=0.0, enabled=true, pluginType=DisplayViewer >>>>> [DEBUG] - class='net.imagej.legacy.display.DefaultImagePlusDisplay', >> priority=0.0, enabled=true, pluginType=Display >>>>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Run', >> priority=0.0, enabled=true, pluginType=ConsoleArgument >>>>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Filename', >> priority=0.0, enabled=true, pluginType=ConsoleArgument >>>>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Debug', >> priority=0.0, enabled=true, pluginType=ConsoleArgument >>>>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Eval', >> priority=0.0, enabled=true, pluginType=ConsoleArgument >>>>> [DEBUG] - class='net.imagej.legacy.LegacyCommandline$Port', >> priority=0.0, enabled=true, pluginType=ConsoleArgument >>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingDateWidget', >> priority=0.0, enabled=true, pluginType=InputWidget >>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingFileWidget', >> priority=0.0, enabled=true, pluginType=InputWidget >>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingChoiceWidget', >> priority=0.0, enabled=true, pluginType=InputWidget >>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingNumberWidget', >> priority=0.0, enabled=true, pluginType=InputWidget >>>>> [DEBUG] - class='org.scijava.ui.swing.SwingIconService', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - >> class='org.scijava.ui.swing.viewer.text.SwingTextDisplayViewer', >> priority=0.0, enabled=true, pluginType=DisplayViewer >>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingObjectWidget', >> priority=0.0, enabled=true, pluginType=InputWidget >>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingToggleWidget', >> priority=0.0, enabled=true, pluginType=InputWidget >>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingTextWidget', >> priority=0.0, enabled=true, pluginType=InputWidget >>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingColorWidget', >> priority=0.0, enabled=true, pluginType=InputWidget >>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingButtonWidget', >> priority=0.0, enabled=true, pluginType=InputWidget >>>>> [DEBUG] - >> class='org.scijava.plugins.scripting.java.CommandJavaRunner', priority=0.0, >> enabled=true, pluginType=JavaRunner >>>>> [DEBUG] - >> class='org.scijava.plugins.scripting.java.DefaultJavaService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - >> class='net.imagej.ui.swing.sdi.viewer.SwingSdiImageDisplayViewer', >> priority=0.0, enabled=true, pluginType=DisplayViewer >>>>> [DEBUG] - >> class='net.imagej.ui.swing.viewer.table.SwingTableDisplayViewer', >> priority=0.0, enabled=true, pluginType=DisplayViewer >>>>> [DEBUG] - class='net.imagej.ui.swing.overlay.JHotDrawService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - >> class='net.imagej.ui.swing.mdi.viewer.SwingMdiImageDisplayViewer', >> priority=0.0, enabled=true, pluginType=DisplayViewer >>>>> [DEBUG] - class='net.imagej.ui.swing.widget.SwingColorTableWidget', >> priority=0.0, enabled=true, pluginType=InputWidget >>>>> [DEBUG] - class='net.imagej.ui.swing.widget.SwingDimSelectionWidget', >> priority=0.0, enabled=true, pluginType=InputWidget >>>>> [DEBUG] - class='net.imagej.ui.swing.widget.SwingHistogramWidget', >> priority=0.0, enabled=true, pluginType=InputWidget >>>>> [DEBUG] - class='net.imagej.updater.FileUploader', priority=0.0, >> enabled=true, pluginType=Uploader >>>>> [DEBUG] - class='net.imagej.updater.DefaultUpdateService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.updater.DefaultUploaderService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.ImageJ', priority=0.0, enabled=true, >> pluginType=Gateway >>>>> [DEBUG] - class='net.imagej.ops.DefaultOpService', priority=0.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.ops.threshold.LocalMean', priority=0.0, >> enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.DefaultOpMatchingService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.plugins.commands.dataset.LoadDataset', >> priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.overlay.SelectedManagerOverlayProperties', >> priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.misc.ApplyLookupTable', >> priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - >> class='org.scijava.plugins.scripting.jruby.JRubyScriptHeader', >> priority=0.0, enabled=true, pluginType=ScriptHeader >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.action.TrackBranchAnalysis$Factory', >> priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.features.track.TrackLocationAnalyzer', >> priority=0.0, enabled=true, pluginType=TrackAnalyzer >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.visualization.hyperstack.HyperStackDisplayerFactory', >> priority=0.0, enabled=true, pluginType=ViewFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.features.edges.EdgeTimeLocationAnalyzer', >> priority=0.0, enabled=true, pluginType=EdgeAnalyzer >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.action.ResetRadiusAction$Factory', >> priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.action.RecalculateFeatureAction$Factory', >> priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.action.ISBIChallengeExporter$Factory', >> priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.action.MergeFileAction$Factory', priority=0.0, >> enabled=true, pluginType=TrackMateActionFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.features.spot.SpotRadiusEstimatorFactory', >> priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.features.track.TrackBranchingAnalyzer', >> priority=0.0, enabled=true, pluginType=TrackAnalyzer >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.action.PlotNSpotsVsTimeAction$Factory', >> priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.action.ExportStatsToIJAction$Factory', >> priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.features.edges.EdgeTargetAnalyzer', >> priority=0.0, enabled=true, pluginType=EdgeAnalyzer >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.features.track.TrackDurationAnalyzer', >> priority=0.0, enabled=true, pluginType=TrackAnalyzer >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.features.spot.SpotIntensityAnalyzerFactory', >> priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.features.edges.EdgeVelocityAnalyzer', >> priority=0.0, enabled=true, pluginType=EdgeAnalyzer >>>>> [DEBUG] - class='fiji.plugin.trackmate.detection.LogDetectorFactory', >> priority=0.0, enabled=true, pluginType=SpotDetectorFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.action.ExportTracksToXML$Factory', >> priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.action.LinkNew3DViewerAction$Factory', >> priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.tracking.oldlap.SimpleLAPTrackerFactory', >> priority=0.0, enabled=true, pluginType=SpotTrackerFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.action.ResetSpotTimeFeatureAction$Factory', >> priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.action.RadiusToEstimatedAction$Factory', >> priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.action.IcyTrackExporter$Factory', >> priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.action.CaptureOverlayAction$Factory', >> priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.tracking.sparselap.SimpleSparseLAPTrackerFactory', >> priority=0.0, enabled=true, pluginType=SpotTrackerFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.features.spot.SpotMorphologyAnalyzerFactory', >> priority=0.0, enabled=false, pluginType=SpotAnalyzerFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.features.track.TrackSpotQualityFeatureAnalyzer', >> priority=0.0, enabled=true, pluginType=TrackAnalyzer >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.action.CopyOverlayAction$Factory', >> priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.tracking.sparselap.SparseLAPTrackerFactory', >> priority=0.0, enabled=true, pluginType=SpotTrackerFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.detection.ManualDetectorFactory', >> priority=0.0, enabled=true, pluginType=SpotDetectorFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.features.manual.ManualSpotColorAnalyzerFactory', >> priority=0.0, enabled=true, pluginType=SpotAnalyzerFactory >>>>> [DEBUG] - class='fiji.plugin.trackmate.detection.DogDetectorFactory', >> priority=0.0, enabled=true, pluginType=SpotDetectorFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.action.ExtractTrackStackAction$Factory', >> priority=0.0, enabled=true, pluginType=TrackMateActionFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.tracking.oldlap.LAPTrackerFactory', >> priority=0.0, enabled=true, pluginType=SpotTrackerFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.features.manual.ManualEdgeColorAnalyzer', >> priority=0.0, enabled=true, pluginType=EdgeAnalyzer >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.features.spot.SpotContrastAnalyzerFactory', >> priority=0.0, enabled=false, pluginType=SpotAnalyzerFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.features.track.TrackSpeedStatisticsAnalyzer', >> priority=0.0, enabled=true, pluginType=TrackAnalyzer >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.detection.DownsampleLogDetectorFactory', >> priority=0.0, enabled=true, pluginType=SpotDetectorFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.visualization.trackscheme.TrackSchemeFactory', >> priority=0.0, enabled=true, pluginType=ViewFactory >>>>> [DEBUG] - >> class='fiji.plugin.trackmate.features.track.TrackIndexAnalyzer', >> priority=0.0, enabled=true, pluginType=TrackAnalyzer >>>>> [DEBUG] - class='io.scif.cli.commands.Help', priority=0.0, >> enabled=true, pluginType=SCIFIOToolCommand >>>>> [DEBUG] - class='io.scif.cli.commands.Show', priority=0.0, >> enabled=true, pluginType=SCIFIOToolCommand >>>>> [DEBUG] - class='io.scif.cli.commands.Info', priority=0.0, >> enabled=true, pluginType=SCIFIOToolCommand >>>>> [DEBUG] - class='io.scif.cli.commands.Convert', priority=0.0, >> enabled=true, pluginType=SCIFIOToolCommand >>>>> [DEBUG] - class='io.scif.ome.commands.OMEXMLToolCommand', >> priority=0.0, enabled=true, pluginType=SCIFIOToolCommand >>>>> [DEBUG] - class='io.scif.ome.translators.DefaultOMETranslator', >> priority=0.0, enabled=true, pluginType=ToOMETranslator >>>>> [DEBUG] - class='io.scif.ome.services.DefaultOMEXMLService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='io.scif.ome.services.DefaultOMEMetadataService', >> priority=0.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat', priority=0.0, >> enabled=true, pluginType=Format >>>>> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat$OMETranslator', >> priority=0.0, enabled=true, pluginType=Translator >>>>> [DEBUG] - class='io.scif.tools.commands.Show', priority=0.0, >> enabled=true, pluginType=SCIFIOToolCommand >>>>> [DEBUG] - class='io.scif.tools.commands.Help', priority=0.0, >> enabled=true, pluginType=SCIFIOToolCommand >>>>> [DEBUG] - class='io.scif.tools.commands.Info', priority=0.0, >> enabled=true, pluginType=SCIFIOToolCommand >>>>> [DEBUG] - class='io.scif.tools.commands.Convert', priority=0.0, >> enabled=true, pluginType=SCIFIOToolCommand >>>>> [DEBUG] - class='io.scif.lifesci.SDTFormat', priority=0.0, >> enabled=true, pluginType=Format >>>>> [DEBUG] - class='net.imagej.options.OptionsPointTool', menu='Edit > >> Options > Point Tool...', priority=0.0, enabled=true, >> pluginType=OptionsPlugin >>>>> [DEBUG] - class='net.imagej.plugins.commands.debug.PointSetDemo', >> menu='Plugins > Sandbox > PointSet Demo', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.PowerDataValues', >> menu='Process > Math > Power...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.app.Preferences', label='Preferences', >> menu='File > Preferences', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.options.OptionsProfilePlot', menu='Edit > >> Options > Profile Plot Options...', priority=0.0, enabled=true, >> pluginType=OptionsPlugin >>>>> [DEBUG] - class='net.imagej.ops.commands.project.ProjectCommand', >> menu='Image > Threshold > Project', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.options.OptionsProxy', menu='Edit > >> Options > Proxy Settings...', priority=0.0, enabled=true, >> pluginType=OptionsPlugin >>>>> [DEBUG] - class='net.imagej.app.QuitProgram', label='Quit', menu='File >>> Quit', iconPath='/icons/commands/door_in.png', priority=0.0, >> enabled=true, pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.assign.noisereduce.RadialNeighborhoodSpecifier', >> label='Radial Neighborhood Specification', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.assign.ReciprocalDataValues', >> menu='Process > Math > Reciprocal...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.assign.noisereduce.RectangularNeighborhoodSpecifier', >> label='Rectangular Neighborhood Specification', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.display.RemoveOverlay', >> menu='Image > Overlay > Remove Overlay', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.display.RemoveOverlayReferences', >> menu='Image > Overlay > Remove Overlay References', priority=0.0, >> enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.ReorderAxis', >> menu='Image > Axes > Reorder Axis', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.restructure.ReorderData', >> menu='Image > Data > Reorder Data...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.options.OptionsReset', menu='Edit > >> Options > Reset', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.ResizeImage', >> menu='Image > Adjust > Resize...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.ResliceImage', >> menu='Image > Stacks > Reslice...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.io.RevertImage', >> menu='File > Revert', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.rotate.Rotate90DegreesLeft', menu='Image >>> Transform > Rotate 90 Degrees Left', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.rotate.Rotate90DegreesRight', >> menu='Image > Transform > Rotate 90 Degrees Right', priority=0.0, >> enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.RotateImageXY', >> menu='Image > Transform > Rotate...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.options.OptionsRoundedRectangleTool', >> menu='Edit > Options > Rounded Rect Tool...', priority=0.0, enabled=true, >> pluginType=OptionsPlugin >>>>> [DEBUG] - class='org.scijava.plugins.commands.script.RunScript', >> menu='Plugins > Run Script...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.SaltAndPepper', >> menu='Process > Noise > Salt and Pepper', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.io.SaveImage', menu='File >>> Save', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.io.SaveAsImage', >> menu='File > Save As...', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.ui.swing.script.ScriptEditor', menu='File >>> New > Script...', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.display.SelectOverlays', >> menu='Edit > Selection > Select Overlays', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.display.SelectView', >> menu='Edit > Selection > Select View', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.display.SelectWindow', label='Select >> Window...', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.legacy.plugin.GetPath', label='Select >> path', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.axispos.SetActiveAxis', >> menu='Image > Axes > Set Active Axis...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.axispos.SetAxisPosition', >> menu='Image > Axes > Set Axis Position...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomSet', label='Set >> Zoom...', menu='Image > Zoom > Set...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.SetDataValues', >> menu='Process > Math > Set...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsDemo', >> menu='Process > Shadows > Shadows Demo', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.correlate.SharpenDataValues', >> menu='Process > Sharpen', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.misc.ShowInfo', >> menu='Image > Show Info...', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.display.ShowLUT', >> menu='Image > Color > Show LUT', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.display.ShowLUTAsTable', >> menu='Image > Color > Show LUT As Table', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.correlate.SmoothDataValues', >> menu='Process > Smooth', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsSouth', >> menu='Process > Shadows > South', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.correlate.ShadowsSoutheast', >> menu='Process > Shadows > Southeast', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.correlate.ShadowsSouthwest', >> menu='Process > Shadows > Southwest', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.overlay.SelectionSpecify', menu='Edit > >> Selection > Specify...', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.display.SpectralComposite', menu='Image >>> Color > Spectral Composite...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.restructure.SplitChannelsContext', >> menu='Split Channels', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.tools.SprayCanToolConfig', >> label='Spray Can Tool', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.assign.SquareRootDataValues', >> menu='Process > Math > Square Root...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.assign.SquareDataValues', >> menu='Process > Math > Square...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.animation.StartAnimation', menu='Image > >> Animation > Start Animation', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.debug.StatisticsDemo', >> menu='Plugins > Sandbox > Statistics Demo', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.animation.StopAllAnimations', >> menu='Image > Animation > Stop All Animations', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.animation.StopAnimation', >> menu='Image > Animation > Stop Animation', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='org.scijava.plugins.commands.debug.ShowSubscribers', >> menu='Plugins > Debug > Subscribers', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.assign.SubtractFromDataValues', >> menu='Process > Math > Subtract...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.legacy.plugin.SwitchToLegacyMode', >> menu='Help > Switch to Legacy Mode', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.display.interactive.SynchronizeWindows', >> menu='Analyze > Tools > Synchronize Windows', >> iconPath='/icons/commands/bricks.png', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='org.scijava.plugins.commands.debug.SystemInformation', menu='Plugins >>> Debug > System Information', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.debug.TableDemo', >> menu='Plugins > Sandbox > Table Demo', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='org.scijava.plugins.commands.debug.TextDisplayTest', >> menu='Plugins > Sandbox > TextDisplayTest', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.updater.PromptUserToUpdate', label='There >> are updates available', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.display.interactive.Threshold', >> menu='Image > Adjust > Threshold...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='org.scijava.ui.swing.mdi.WindowsTileVertical', >> menu='Window > Tile Vertical', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomToSelection', >> menu='Image > Zoom > To Selection', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.imglib.TranslateImage', >> menu='Image > Transform > Translate...', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.assign.noisereduce.NoiseReductionTrimmedMean', >> menu='Process > Noise > Noise Reduction > Trimmed Mean', priority=0.0, >> enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.updater.CheckForUpdates', >> label='Up-to-date check', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.ui.swing.updater.ImageJUpdater', >> menu='Help > Update...', priority=0.0, enabled=true, pluginType=UpdaterUI >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.upload.SampleImageUploader', menu='Help >>> Upload Sample Image', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.zoom.Zoom100Percent', >> menu='Image > Zoom > View 100%', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.options.OptionsWandTool', menu='Edit > >> Options > Wand Tool...', priority=0.0, enabled=true, >> pluginType=OptionsPlugin >>>>> [DEBUG] - class='org.scijava.ui.swing.commands.WatchEvents', >> menu='Plugins > Debug > Watch Events', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.correlate.ShadowsWest', >> menu='Process > Shadows > West', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.plugins.commands.assign.XorDataValuesWith', menu='Process >>> Math > XOR...', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomIn', label='Zoom >> In', menu='Image > Zoom > In', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - class='net.imagej.plugins.commands.zoom.ZoomOut', >> label='Zoom Out', menu='Image > Zoom > Out', priority=0.0, enabled=true, >> pluginType=Command >>>>> [DEBUG] - >> class='net.imagej.ui.swing.script.TextEditor$BeanshellHighlighter', >> label='beanshell', priority=0.0, enabled=true, pluginType=SyntaxHighlighter >>>>> [DEBUG] - >> class='net.imagej.ui.swing.script.TextEditor$ECMAScriptHighlighter', >> label='ecmascript', priority=0.0, enabled=true, pluginType=SyntaxHighlighter >>>>> [DEBUG] - >> class='net.imagej.ui.swing.script.TextEditor$IJ1MacroHighlighter', >> label='ij1-macro', priority=0.0, enabled=true, pluginType=SyntaxHighlighter >>>>> [DEBUG] - >> class='net.imagej.ui.swing.script.TextEditor$MatlabHighlighter', >> label='matlab', priority=0.0, enabled=true, pluginType=SyntaxHighlighter >>>>> [DEBUG] - class='net.imagej.plugins.commands.app.EasterEgg', label='| >> It's a secret to everyone |', priority=0.0, enabled=true, pluginType=Command >>>>> [DEBUG] - class='io.scif.formats.APNGFormat', name='Animated PNG', >> priority=0.0, enabled=true, pluginType=Format >>>>> [DEBUG] - class='io.scif.img.converters.ArrayDataAccessConverter', >> name='ArrayDataAccess', priority=0.0, enabled=true, >> pluginType=PlaneConverter >>>>> [DEBUG] - class='io.scif.formats.AVIFormat', name='Audio Video >> Interleave', priority=0.0, enabled=true, pluginType=Format >>>>> [DEBUG] - class='net.imagej.plugins.tools.AxisPositionHandler', >> name='Axis Position Shortcuts', priority=0.0, enabled=true, pluginType=Tool >>>>> [DEBUG] - >> class='org.scijava.plugins.scripting.beanshell.BeanshellScriptLanguage', >> name='BeanShell', priority=0.0, enabled=true, pluginType=ScriptLanguage >>>>> [DEBUG] - >> class='org.scijava.plugins.scripting.clojure.ClojureScriptLanguage', >> name='Clojure', priority=0.0, enabled=true, pluginType=ScriptLanguage >>>>> [DEBUG] - >> class='net.imagej.autoscale.ConfidenceIntervalAutoscaleMethod', >> name='Confidence Interval', priority=0.0, enabled=true, >> pluginType=AutoscaleMethod >>>>> [DEBUG] - class='net.imagej.plugins.tools.ContextMenuHandler', >> name='Context Menus', priority=0.0, enabled=true, pluginType=Tool >>>>> [DEBUG] - class='io.scif.formats.DICOMFormat', name='DICOM', >> priority=0.0, enabled=true, pluginType=Format >>>>> [DEBUG] - class='net.imagej.autoscale.DefaultAutoscaleMethod', >> name='Default', priority=0.0, enabled=true, pluginType=AutoscaleMethod >>>>> [DEBUG] - class='net.imagej.threshold.DefaultThresholdMethod', >> name='Default', priority=0.0, enabled=true, pluginType=ThresholdMethod >>>>> [DEBUG] - class='io.scif.img.converters.RandomAccessConverter', >> name='Default', priority=0.0, enabled=true, pluginType=PlaneConverter >>>>> [DEBUG] - class='io.scif.formats.EPSFormat', name='Encapsulated >> PostScript', priority=0.0, enabled=true, pluginType=Format >>>>> [DEBUG] - class='io.scif.formats.FITSFormat', name='Flexible Image >> Transport System', priority=0.0, enabled=true, pluginType=Format >>>>> [DEBUG] - class='io.scif.formats.GIFFormat', name='Graphics >> Interchange Format', priority=0.0, enabled=true, pluginType=Format >>>>> [DEBUG] - >> class='org.scijava.plugins.scripting.groovy.GroovyScriptLanguage', >> name='Groovy', priority=0.0, enabled=true, pluginType=ScriptLanguage >>>>> [DEBUG] - class='net.imagej.threshold.HuangThresholdMethod', >> name='Huang', priority=0.0, enabled=true, pluginType=ThresholdMethod >>>>> [DEBUG] - class='net.imagej.legacy.plugin.IJ1MacroLanguage', name='IJ1 >> Macro', priority=0.0, enabled=true, pluginType=ScriptLanguage >>>>> [DEBUG] - class='io.scif.formats.ICSFormat', name='Image Cytometry >> Standard', priority=0.0, enabled=true, pluginType=Format >>>>> [DEBUG] - class='net.imagej.legacy.LegacyImageJApp', name='ImageJ1', >> priority=0.0, enabled=true, pluginType=App >>>>> [DEBUG] - class='net.imagej.threshold.IntermodesThresholdMethod', >> name='Intermodes', priority=0.0, enabled=true, pluginType=ThresholdMethod >>>>> [DEBUG] - class='net.imagej.threshold.IsoDataThresholdMethod', >> name='IsoData', priority=0.0, enabled=true, pluginType=ThresholdMethod >>>>> [DEBUG] - class='io.scif.formats.JPEGFormat', name='JPEG', >> priority=0.0, enabled=true, pluginType=Format >>>>> [DEBUG] - class='io.scif.formats.JPEG2000Format', name='JPEG-2000', >> priority=0.0, enabled=true, pluginType=Format >>>>> [DEBUG] - >> class='org.scijava.plugins.scripting.java.JavaScriptLanguage', name='Java', >> priority=0.0, enabled=true, pluginType=ScriptLanguage >>>>> [DEBUG] - class='io.scif.formats.JavaFormat', name='Java source code', >> priority=0.0, enabled=true, pluginType=Format >>>>> [DEBUG] - >> class='org.scijava.plugins.scripting.javascript.JavaScriptScriptLanguage', >> name='JavaScript', priority=0.0, enabled=true, pluginType=ScriptLanguage >>>>> [DEBUG] - class='net.imagej.threshold.LiThresholdMethod', name='Li', >> priority=0.0, enabled=true, pluginType=ThresholdMethod >>>>> [DEBUG] - class='org.scijava.plugins.platforms.macosx.MacOSXPlatform', >> name='Mac OS X', priority=0.0, enabled=true, pluginType=Platform >>>>> [DEBUG] - class='net.imagej.threshold.MaxEntropyThresholdMethod', >> name='MaxEntropy', priority=0.0, enabled=true, pluginType=ThresholdMethod >>>>> [DEBUG] - class='net.imagej.threshold.MaxLikelihoodThresholdMethod', >> name='MaxLikelihood', priority=0.0, enabled=true, pluginType=ThresholdMethod >>>>> [DEBUG] - class='net.imagej.threshold.MeanThresholdMethod', >> name='Mean', priority=0.0, enabled=true, pluginType=ThresholdMethod >>>>> [DEBUG] - class='io.scif.formats.MicromanagerFormat', >> name='Micro-Manager', priority=0.0, enabled=true, pluginType=Format >>>>> [DEBUG] - class='net.imagej.threshold.MinErrorThresholdMethod', >> name='MinError(I)', priority=0.0, enabled=true, pluginType=ThresholdMethod >>>>> [DEBUG] - class='net.imagej.threshold.MinimumThresholdMethod', >> name='Minimum', priority=0.0, enabled=true, pluginType=ThresholdMethod >>>>> [DEBUG] - class='net.imagej.threshold.MomentsThresholdMethod', >> name='Moments', priority=0.0, enabled=true, pluginType=ThresholdMethod >>>>> [DEBUG] - class='io.scif.formats.MNGFormat', name='Multiple Network >> Graphics', priority=0.0, enabled=true, pluginType=Format >>>>> [DEBUG] - class='io.scif.formats.NRRDFormat', name='NRRD', >> priority=0.0, enabled=true, pluginType=Format >>>>> [DEBUG] - class='io.scif.formats.OBFFormat', name='OBF', priority=0.0, >> enabled=true, pluginType=Format >>>>> [DEBUG] - class='net.imagej.threshold.OtsuThresholdMethod', >> name='Otsu', priority=0.0, enabled=true, pluginType=ThresholdMethod >>>>> [DEBUG] - class='io.scif.formats.PCXFormat', name='PCX', priority=0.0, >> enabled=true, pluginType=Format >>>>> [DEBUG] - class='io.scif.formats.qt.PICTFormat', name='PICT', >> priority=0.0, enabled=true, pluginType=Format >>>>> [DEBUG] - class='net.imagej.plugins.tools.PanActivator', name='Pan >> Activator', priority=0.0, enabled=true, pluginType=Tool >>>>> [DEBUG] - class='net.imagej.threshold.PercentileThresholdMethod', >> name='Percentile', priority=0.0, enabled=true, pluginType=ThresholdMethod >>>>> [DEBUG] - class='io.scif.img.converters.PlanarAccessConverter', >> name='PlanarAccess', priority=0.0, enabled=true, pluginType=PlaneConverter >>>>> [DEBUG] - class='io.scif.formats.PGMFormat', name='Portable Gray Map', >> priority=0.0, enabled=true, pluginType=Format >>>>> [DEBUG] - class='net.imagej.plugins.tools.PixelProbe', name='Probe', >> priority=0.0, enabled=true, pluginType=Tool >>>>> [DEBUG] - >> class='org.scijava.plugins.scripting.jython.JythonScriptLanguage', >> name='Python', priority=0.0, enabled=true, pluginType=ScriptLanguage >>>>> [DEBUG] - class='io.scif.formats.qt.NativeQTFormat', name='QuickTime', >> priority=0.0, enabled=true, pluginType=Format >>>>> [DEBUG] - class='net.imagej.threshold.RenyiEntropyThresholdMethod', >> name='RenyiEntropy', priority=0.0, enabled=true, pluginType=ThresholdMethod >>>>> [DEBUG] - >> class='org.scijava.plugins.scripting.jruby.JRubyScriptLanguage', >> name='Ruby', priority=0.0, enabled=true, pluginType=ScriptLanguage >>>>> [DEBUG] - class='io.scif.app.SCIFIOApp', name='SCIFIO', priority=0.0, >> enabled=true, pluginType=App >>>>> [DEBUG] - class='net.imagej.threshold.ShanbhagThresholdMethod', >> name='Shanbhag', priority=0.0, enabled=true, pluginType=ThresholdMethod >>>>> [DEBUG] - class='io.scif.formats.FakeFormat', name='Simulated data', >> priority=0.0, enabled=true, pluginType=Format >>>>> [DEBUG] - class='io.scif.formats.TextFormat', name='Text', >> priority=0.0, enabled=true, pluginType=Format >>>>> [DEBUG] - class='net.imagej.threshold.TriangleThresholdMethod', >> name='Triangle', priority=0.0, enabled=true, pluginType=ThresholdMethod >>>>> [DEBUG] - class='net.imagej.plugins.tools.FocusHandler', name='Window >> Focus', priority=0.0, enabled=true, pluginType=Tool >>>>> [DEBUG] - >> class='org.scijava.plugins.platforms.windows.WindowsPlatform', >> name='Windows', priority=0.0, enabled=true, pluginType=Platform >>>>> [DEBUG] - class='io.scif.formats.BMPFormat', name='Windows Bitmap', >> priority=0.0, enabled=true, pluginType=Format >>>>> [DEBUG] - class='net.imagej.threshold.YenThresholdMethod', name='Yen', >> priority=0.0, enabled=true, pluginType=ThresholdMethod >>>>> [DEBUG] - class='io.scif.formats.ZipFormat', name='Zip', priority=0.0, >> enabled=true, pluginType=Format >>>>> [DEBUG] - class='net.imagej.plugins.tools.ZoomHandler', name='Zoom >> Shortcuts', priority=0.0, enabled=true, pluginType=Tool >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealAbs', >> name='abs', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.arithmetic.add.AddConstantToImageInPlace', >> name='add', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.arithmetic.add.AddRandomAccessibleIntervalToIterableInterval', >> name='add', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.arithmetic.add.AddConstantToPlanarDoubleImage', >> name='add', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealAddConstant', >> name='addconstant', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealAddNoise', >> name='addnoise', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealAndConstant', >> name='andconstant', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccos', >> name='arccos', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealArccosh', >> name='arccosh', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccot', >> name='arccot', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealArccoth', >> name='arccoth', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArccsc', >> name='arccsc', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealArccsch', >> name='arccsch', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArcsec', >> name='arcsec', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealArcsech', >> name='arcsech', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArcsin', >> name='arcsin', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealArcsinh', >> name='arcsinh', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealArctan', >> name='arctan', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealArctanh', >> name='arctanh', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.ascii.DefaultASCII', name='ascii', >> priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCeil', >> name='ceil', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.chunker.DefaultChunker', >> name='chunker', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealConstant', >> name='constant', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.convert.ConvertPixClip', >> name='convert', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.convert.ConvertII', name='convert', >> priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.convert.ConvertPixNormalizeScale', >> name='convert', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.convert.ConvertPixScale', >> name='convert', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.convert.ConvertPixCopy', >> name='convert', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.convolve.ConvolveNaive', >> name='convolve', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.convolve.ConvolveFourier', >> name='convolve', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCopy', >> name='copy', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCos', >> name='cos', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCosh', >> name='cosh', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCot', >> name='cot', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCoth', >> name='coth', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.create.CreateArrayImg', name='create', >> priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCsc', >> name='csc', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealCsch', >> name='csch', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealCubeRoot', >> name='cuberoot', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealDivideConstant', >> name='divideconstant', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.equation.DefaultEquation', >> name='equation', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealExp', >> name='exp', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealExpMinusOne', >> name='expminusone', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealFloor', >> name='floor', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealGammaConstant', >> name='gammaconstant', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.gauss.GaussRAI2RAI', name='gauss', >> priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealGaussianRandom', >> name='gaussianrandom', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.identity.DefaultIdentity', >> name='identity', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealInvert', >> name='invert', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinInplaceAndInplace', >> name='join', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinInplaceAndFunction', >> name='join', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinFunctionAndFunction', >> name='join', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinInplaceFunctions', >> name='join', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinFunctionAndInplace', >> name='join', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.join.DefaultJoinFunctions', >> name='join', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealLog', >> name='log', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealLog10', >> name='log10', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealLog2', >> name='log2', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealLogOnePlusX', >> name='logoneplusx', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.lookup.DefaultLookup', name='lookup', >> aliases='op', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.loop.DefaultLoopInplace', name='loop', >> priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.loop.DefaultLoopFunction', >> name='loop', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.threshold.Manual', >> name='manualthreshold', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.map.MapRA2View', name='map', >> priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.map.MapRAI2View', name='map', >> priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.map.MapII2View', name='map', >> priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealMaxConstant', >> name='maxconstant', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealMinConstant', >> name='minconstant', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.misc.MinMaxRealType', name='minmax', >> priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.statistics.moments.Moment2AboutMean', >> name='moment1aboutmean', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.statistics.moments.Moment1AboutMean', >> name='moment1aboutmean', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealMultiplyConstant', >> name='multiplyconstant', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealNearestInt', >> name='nearestint', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealNegate', >> name='negate', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.normalize.NormalizeRealType', >> name='normalize', aliases='norm', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.normalize.NormalizeII', >> name='normalize', aliases='norm', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealOrConstant', >> name='orconstant', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.threshold.Otsu', name='otsu', >> priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealPowerConstant', >> name='powerconstant', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealReciprocal', >> name='reciprocal', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealRound', >> name='round', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.scale.ScaleImg', name='scale', >> aliases='norm', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSec', >> name='sec', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSech', >> name='sech', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSignum', >> name='signum', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSin', >> name='sin', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSinc', >> name='sinc', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSincPi', >> name='sincpi', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSinh', >> name='sinh', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSqr', >> name='sqr', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealSqrt', >> name='sqrt', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealStep', >> name='step', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealSubtractConstant', >> name='subtractconstant', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='org.scijava.ui.swing.sdi.SwingSDIUI', name='swing', >> priority=0.0, enabled=true, pluginType=UserInterface >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealTan', >> name='tan', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealTanh', >> name='tanh', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.threshold.PixThreshold', >> name='threshold', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.threshold.GlobalThreshold', >> name='threshold', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.threshold.LocalThreshold', >> name='threshold', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealUlp', >> name='ulp', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealUniformRandom', >> name='uniformrandom', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - >> class='net.imagej.ops.generated.arithmetic.real.RealXorConstant', >> name='xorconstant', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.generated.arithmetic.real.RealZero', >> name='zero', priority=0.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='fiji.plugin.trackmate.tracking.ManualTrackerFactory', >> priority=-1.0, enabled=true, pluginType=SpotTrackerFactory >>>>> [DEBUG] - class='net.imagej.ops.map.ParallelMap', name='map', >> priority=-95.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.map.ParallelMapI2I', name='map', >> priority=-97.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.map.ParallelMapI2R', name='map', >> priority=-98.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.crop.CropImgPlus', name='crop', >> aliases='slice', priority=-99.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.crop.CropLabeling', name='crop', >> aliases='slice', priority=-99.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.map.MapII2II', name='map', >> priority=-99.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.project.parallel.DefaultProjectP', >> name='project', priority=-99.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.statistics.StdDevRealTypeDirect', >> name='stddev', priority=-99.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.statistics.VarianceRealTypeDirect', >> name='variance', priority=-99.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='org.scijava.ui.dnd.FileDragAndDropHandler', >> priority=-100.0, enabled=true, pluginType=DragAndDropHandler >>>>> [DEBUG] - class='org.scijava.display.DefaultTextDisplay', >> priority=-100.0, enabled=true, pluginType=Display >>>>> [DEBUG] - class='org.scijava.log.StderrLogService', priority=-100.0, >> enabled=true, pluginType=Service >>>>> [DEBUG] - class='org.scijava.platform.DefaultAppEventService', >> priority=-100.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.display.DummyScreenCaptureService', >> priority=-100.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.render.DummyRenderingService', >> priority=-100.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='net.imagej.io.DatasetIOPlugin', priority=-100.0, >> enabled=true, pluginType=IOPlugin >>>>> [DEBUG] - class='io.scif.formats.APNGFormat$APNGTranslator', >> priority=-100.0, enabled=true, pluginType=Translator >>>>> [DEBUG] - >> class='io.scif.formats.qt.NativeQTFormat$NativeQTTranslator', >> priority=-100.0, enabled=true, pluginType=Translator >>>>> [DEBUG] - class='io.scif.formats.FakeFormat$FakeTranslator', >> priority=-100.0, enabled=true, pluginType=Translator >>>>> [DEBUG] - >> class='io.scif.formats.MicromanagerFormat$MicromanagerTranslator', >> priority=-100.0, enabled=true, pluginType=Translator >>>>> [DEBUG] - class='io.scif.services.DefaultInitializeService', >> priority=-100.0, enabled=true, pluginType=Service >>>>> [DEBUG] - class='io.scif.formats.AVIFormat$Translator', >> priority=-100.0, enabled=true, pluginType=Translator >>>>> [DEBUG] - class='io.scif.formats.ICSFormat$ICSTranslator', >> priority=-100.0, enabled=true, pluginType=Translator >>>>> [DEBUG] - class='io.scif.formats.EPSFormat$EPSTranslator', >> priority=-100.0, enabled=true, pluginType=Translator >>>>> [DEBUG] - class='io.scif.formats.ImageIOFormat$ImageIOTranslator', >> priority=-100.0, enabled=true, pluginType=Translator >>>>> [DEBUG] - >> class='io.scif.formats.qt.LegacyQTFormat$LegacyQTTranslator', >> priority=-100.0, enabled=true, pluginType=Translator >>>>> [DEBUG] - class='net.imagej.legacy.plugin.DefaultLegacyOpener', >> priority=-100.0, enabled=true, pluginType=LegacyOpener >>>>> [DEBUG] - class='net.imagej.legacy.plugin.DefaultLegacyEditor', >> priority=-100.0, enabled=true, pluginType=LegacyEditor >>>>> [DEBUG] - class='org.scijava.plugins.scripting.java.MainJavaRunner', >> priority=-100.0, enabled=true, pluginType=JavaRunner >>>>> [DEBUG] - class='io.scif.ome.formats.OMEXMLFormat$OMEXMLTranslator', >> priority=-100.0, enabled=true, pluginType=Translator >>>>> [DEBUG] - class='io.scif.formats.qt.LegacyQTFormat', name='QuickTime', >> priority=-100.0, enabled=true, pluginType=Format >>>>> [DEBUG] - class='org.scijava.app.SciJavaApp', name='SciJava', >> priority=-100.0, enabled=true, pluginType=App >>>>> [DEBUG] - class='io.scif.formats.JPEGTileFormat', name='Tile JPEG', >> priority=-100.0, enabled=true, pluginType=Format >>>>> [DEBUG] - >> class='net.imagej.ops.arithmetic.add.AddConstantToNumericType', name='add', >> priority=-100.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='org.scijava.ui.awt.AWTUI', name='awt', >> priority=-100.0, enabled=true, pluginType=UserInterface >>>>> [DEBUG] - class='net.imagej.ops.crop.CropRAI', name='crop', >> aliases='slice', priority=-100.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.map.MapII2RAI', name='map', >> priority=-100.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.map.MapRAI2III', name='map', >> priority=-100.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.map.MapI', name='map', >> priority=-100.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.neighborhood.MapNeighborhood', >> name='map', priority=-100.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.statistics.MaxRealType', name='max', >> priority=-100.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.statistics.MeanRealType', name='mean', >> priority=-100.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.statistics.MedianRealType', >> name='median', priority=-100.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.statistics.MinRealType', name='min', >> priority=-100.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.project.ProjectRAI2II', >> name='project', priority=-100.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.misc.SizeIterableInterval', >> name='size', priority=-100.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.statistics.StdDevRealType', >> name='stddev', priority=-100.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.statistics.SumRealType', name='sum', >> priority=-100.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='org.scijava.ui.swing.mdi.SwingMdiUI', >> name='swing-mdi', priority=-100.0, enabled=true, pluginType=UserInterface >>>>> [DEBUG] - class='net.imagej.ops.statistics.VarianceRealType', >> name='variance', priority=-100.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='org.scijava.text.io.TextIOPlugin', priority=-101.0, >> enabled=true, pluginType=IOPlugin >>>>> [DEBUG] - class='net.imagej.ops.map.MapI2I', name='map', >> priority=-101.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.plugins.tools.WandTool', name='Wand', >> description='Wand (tracing) tool', iconPath='/icons/tools/wand.png', >> priority=-110.0, enabled=false, pluginType=Tool >>>>> [DEBUG] - class='net.imagej.ui.swing.tools.SwingTextTool', >> name='Text', description='Text tool', iconPath='/icons/tools/text.png', >> priority=-115.0, enabled=false, pluginType=Tool >>>>> [DEBUG] - class='net.imagej.plugins.tools.ZoomTool', name='Zoom', >> description='Magnifying glass (or use "+" and "-" keys)', >> iconPath='/icons/tools/zoom.png', priority=-200.0, enabled=true, >> pluginType=Tool >>>>> [DEBUG] - class='net.imagej.plugins.tools.PanTool', name='Pan', >> description='Scrolling tool (or press space bar and drag)', >> iconPath='/icons/tools/pan.png', priority=-201.0, enabled=true, >> pluginType=Tool >>>>> [DEBUG] - class='net.imagej.plugins.tools.PaintBrushTool', >> name='Paintbrush', description='Paintbrush Tool', >> iconPath='/icons/tools/paintbrush.png', priority=-300.0, enabled=true, >> pluginType=Tool >>>>> [DEBUG] - class='net.imagej.plugins.tools.PencilTool', name='Pencil', >> description='Pencil Tool', iconPath='/icons/tools/pencil.png', >> priority=-301.0, enabled=true, pluginType=Tool >>>>> [DEBUG] - class='net.imagej.plugins.tools.SprayCanTool', >> name='SprayCan', label='Spray Can', description='Spray Can Tool', >> iconPath='/icons/tools/spray-can.png', priority=-303.0, enabled=true, >> pluginType=Tool >>>>> [DEBUG] - class='net.imagej.plugins.tools.FloodFillTool', >> name='FloodFill', label='Flood Fill', description='Flood Fill Tool', >> iconPath='/icons/tools/flood-fill.png', priority=-304.0, enabled=true, >> pluginType=Tool >>>>> [DEBUG] - class='net.imagej.plugins.tools.ArrowTool', name='Arrow', >> description='Arrow Tool', iconPath='/icons/tools/arrow.png', >> priority=-305.0, enabled=false, pluginType=Tool >>>>> [DEBUG] - class='net.imagej.plugins.tools.FgColorTool', >> name='Foreground', iconPath='/icons/tools/blank.png', priority=-500.0, >> enabled=true, pluginType=Tool >>>>> [DEBUG] - class='net.imagej.plugins.tools.BgColorTool', >> name='Background', iconPath='/icons/tools/blankBlack.png', priority=-501.0, >> enabled=true, pluginType=Tool >>>>> [DEBUG] - class='io.scif.ome.formats.OMETIFFFormat', priority=-9998.0, >> enabled=true, pluginType=Format >>>>> [DEBUG] - class='io.scif.ome.formats.OMETIFFFormat$OMETIFFTranslator', >> priority=-9998.0, enabled=true, pluginType=Translator >>>>> [DEBUG] - class='org.scijava.module.process.LoadInputsPreprocessor', >> priority=-9999.0, enabled=true, pluginType=PreprocessorPlugin >>>>> [DEBUG] - class='io.scif.formats.TIFFFormat$TIFFTranslator', >> priority=-9999.0, enabled=true, pluginType=Translator >>>>> [DEBUG] - class='io.scif.formats.TIFFFormat', name='Tagged Image File >> Format', priority=-9999.0, enabled=true, pluginType=Format >>>>> [DEBUG] - class='org.scijava.ui.FilePreprocessor', priority=-9999.5, >> enabled=true, pluginType=PreprocessorPlugin >>>>> [DEBUG] - class='org.scijava.ui.awt.widget.AWTInputHarvester', >> priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin >>>>> [DEBUG] - class='org.scijava.plugins.text.plain.PlainTextFormat', >> priority=-10000.0, enabled=true, pluginType=TextFormat >>>>> [DEBUG] - class='org.scijava.display.DisplayPostprocessor', >> priority=-10000.0, enabled=true, pluginType=PostprocessorPlugin >>>>> [DEBUG] - class='io.scif.DefaultTranslator', priority=-10000.0, >> enabled=true, pluginType=Translator >>>>> [DEBUG] - class='net.imagej.legacy.ui.LegacyInputHarvester', >> priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin >>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingInputHarvester', >> priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin >>>>> [DEBUG] - class='org.scijava.ui.swing.widget.SwingMdiInputHarvester', >> priority=-10000.0, enabled=true, pluginType=PreprocessorPlugin >>>>> [DEBUG] - class='net.imagej.ui.swing.overlay.DefaultJHotDrawAdapter', >> priority=-10000.0, enabled=true, pluginType=JHotDrawAdapter >>>>> [DEBUG] - class='org.scijava.platform.DefaultPlatform', >> name='Default', priority=-10000.0, enabled=true, pluginType=Platform >>>>> [DEBUG] - class='net.imagej.plugins.tools.AcceleratorHandler', >> name='Keyboard Shortcuts', priority=-10000.0, enabled=true, pluginType=Tool >>>>> [DEBUG] - class='io.scif.formats.MinimalTIFFFormat', name='Minimal >> TIFF', priority=-10000.0, enabled=true, pluginType=Format >>>>> [DEBUG] - >> class='net.imagej.ops.arithmetic.add.AddConstantToImageFunctional', >> name='add', priority=-10000.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='net.imagej.ops.chunker.InterleavedChunker', >> name='chunker', priority=-10000.0, enabled=true, pluginType=Op >>>>> [DEBUG] - class='org.scijava.module.process.CheckInputsPreprocessor', >> priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin >>>>> [DEBUG] - class='org.scijava.module.process.SaveInputsPreprocessor', >> priority=-10001.0, enabled=true, pluginType=PreprocessorPlugin >>>>> [DEBUG] - class='io.scif.formats.TIFFJAIFormat', name='Tagged Image >> File Format', priority=-10001.0, enabled=true, pluginType=Format >>>>> [DEBUG] - class='net.imagej.ops.misc.SizeIterable', name='size', >> priority=-Infinity, enabled=true, pluginType=Op >>>>> [DEBUG] Created service 'org.scijava.plugin.DefaultPluginService' in >> 51 ms >>>>> [DEBUG] Creating service: org.scijava.object.DefaultObjectService >>>>> log4j:WARN No appenders could be found for logger >> (org.bushe.swing.event.EventService). >>>>> log4j:WARN Please initialize the log4j system properly. >>>>> log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig >> for more info. >>>>> [DEBUG] Created service 'org.scijava.object.DefaultObjectService' in >> 72 ms >>>>> [DEBUG] Creating service: org.scijava.module.DefaultModuleService >>>>> [DEBUG] Creating service: org.scijava.prefs.DefaultPrefService >>>>> [DEBUG] Created service 'org.scijava.prefs.DefaultPrefService' in 4 ms >>>>> [DEBUG] Creating service: org.scijava.convert.DefaultConvertService >>>>> [DEBUG] Created service 'org.scijava.convert.DefaultConvertService' in >> 4 ms >>>>> [DEBUG] Created service 'org.scijava.module.DefaultModuleService' in >> 14 ms >>>>> [DEBUG] Creating service: org.scijava.command.DefaultCommandService >>>>> [DEBUG] Created service 'org.scijava.command.DefaultCommandService' in >> 36 ms >>>>> [DEBUG] Created service 'org.scijava.script.DefaultScriptService' in >> 184 ms >>>>> [DEBUG] Creating service: net.imagej.lut.DefaultLUTService >>>>> [DEBUG] Creating service: net.imagej.DefaultDatasetService >>>>> [DEBUG] Creating service: io.scif.services.DefaultFormatService >>>>> [DEBUG] Created service 'io.scif.services.DefaultFormatService' in 3 ms >>>>> [DEBUG] Creating service: net.imagej.types.DefaultDataTypeService >>>>> [INFO] Found 11 DataType plugins. >>>>> [DEBUG] Created service 'net.imagej.types.DefaultDataTypeService' in >> 40 ms >>>>> [DEBUG] Created service 'net.imagej.DefaultDatasetService' in 61 ms >>>>> [DEBUG] Creating service: org.scijava.display.DefaultDisplayService >>>>> [DEBUG] Created service 'org.scijava.display.DefaultDisplayService' in >> 5 ms >>>>> [DEBUG] Creating service: net.imagej.display.DefaultImageDisplayService >>>>> [DEBUG] Created service >> 'net.imagej.display.DefaultImageDisplayService' in 3 ms >>>>> [DEBUG] Created service 'net.imagej.lut.DefaultLUTService' in 74 ms >>>>> [DEBUG] Creating service: net.imagej.legacy.DefaultLegacyService >>>>> [DEBUG] Creating service: net.imagej.display.DefaultOverlayService >>>>> [DEBUG] Creating service: org.scijava.options.DefaultOptionsService >>>>> [DEBUG] Created service 'org.scijava.options.DefaultOptionsService' in >> 2 ms >>>>> [DEBUG] Creating service: net.imagej.ui.awt.AWTRenderingService >>>>> [DEBUG] Created service 'net.imagej.ui.awt.AWTRenderingService' in 1 ms >>>>> [DEBUG] Created service 'net.imagej.display.DefaultOverlayService' in >> 10 ms >>>>> [DEBUG] Creating service: net.imagej.threshold.DefaultThresholdService >>>>> [DEBUG] Created service 'net.imagej.threshold.DefaultThresholdService' >> in 4 ms >>>>> [DEBUG] Creating service: org.scijava.menu.DefaultMenuService >>>>> [DEBUG] Created service 'org.scijava.menu.DefaultMenuService' in 3 ms >>>>> [DEBUG] Creating service: org.scijava.app.DefaultStatusService >>>>> [DEBUG] Creating service: org.scijava.app.DefaultAppService >>>>> [DEBUG] Created service 'org.scijava.app.DefaultAppService' in 4 ms >>>>> [DEBUG] Created service 'org.scijava.app.DefaultStatusService' in 5 ms >>>>> [INFO] Found 8 ScriptLanguage plugins. >>>>> [INFO] Found 0 scripts >>>>> [INFO] Overriding Upload Sample Image; identifier: >> command:net.imagej.plugins.commands.upload.SampleImageUploader; jar: >> file:/opt/Fiji.app/jars/imagej-plugins-commands-0.2.6.jar >>>>> [INFO] Overriding Test FlowCam; identifier: >> script:/opt/Fiji.app/plugins/FlowCam/Test_FlowCam.ijm; jar: >> file:/opt/Fiji.app/jars/scijava-common-2.33.0.jar >>>>> [DEBUG] Created service 'net.imagej.legacy.DefaultLegacyService' in >> 685 ms >>>>> [DEBUG] Creating service: fiji.DefaultFijiService >>>>> [DEBUG] Created service 'fiji.DefaultFijiService' in 1 ms >>>>> [DEBUG] Creating service: net.imglib2.meta.units.DefaultUnitService >>>>> [DEBUG] Created service 'net.imglib2.meta.units.DefaultUnitService' in >> 44 ms >>>>> [DEBUG] Creating service: net.imagej.ui.awt.AWTScreenCaptureService >>>>> [DEBUG] Created service 'net.imagej.ui.awt.AWTScreenCaptureService' in >> 2 ms >>>>> [DEBUG] Creating service: org.scijava.input.DefaultInputService >>>>> [DEBUG] Created service 'org.scijava.input.DefaultInputService' in 6 ms >>>>> [DEBUG] Creating service: org.scijava.ui.DefaultUIService >>>>> [DEBUG] Creating service: org.scijava.platform.DefaultPlatformService >>>>> [DEBUG] Creating service: org.scijava.platform.DefaultAppEventService >>>>> [DEBUG] Created service 'org.scijava.platform.DefaultAppEventService' >> in 2 ms >>>>> [INFO] Found 1 Platform plugins. >>>>> [DEBUG] Configuring platform: org.scijava.platform.DefaultPlatform >>>>> [DEBUG] Created service 'org.scijava.platform.DefaultPlatformService' >> in 11 ms >>>>> [DEBUG] Creating service: org.scijava.tool.DefaultToolService >>>>> [DEBUG] Created service 'org.scijava.tool.DefaultToolService' in 5 ms >>>>> [DEBUG] Created service 'org.scijava.ui.DefaultUIService' in 23 ms >>>>> [DEBUG] Creating service: org.scijava.ui.dnd.DefaultDragAndDropService >>>>> [DEBUG] Created service 'org.scijava.ui.dnd.DefaultDragAndDropService' >> in 5 ms >>>>> [DEBUG] Creating service: org.scijava.text.DefaultTextService >>>>> [DEBUG] Created service 'org.scijava.text.DefaultTextService' in 3 ms >>>>> [DEBUG] Creating service: org.scijava.io.DefaultRecentFileService >>>>> [DEBUG] Created service 'org.scijava.io.DefaultRecentFileService' in >> 61 ms >>>>> [DEBUG] Creating service: org.scijava.io.DefaultIOService >>>>> [DEBUG] Created service 'org.scijava.io.DefaultIOService' in 4 ms >>>>> [DEBUG] Creating service: org.scijava.widget.DefaultWidgetService >>>>> [INFO] Found 22 InputWidget plugins. >>>>> [DEBUG] Created service 'org.scijava.widget.DefaultWidgetService' in 6 >> ms >>>>> [DEBUG] Creating service: org.scijava.welcome.DefaultWelcomeService >>>>> [DEBUG] Created service 'org.scijava.welcome.DefaultWelcomeService' in >> 2 ms >>>>> [DEBUG] Creating service: org.scijava.script.DefaultScriptHeaderService >>>>> [DEBUG] Created service >> 'org.scijava.script.DefaultScriptHeaderService' in 2 ms >>>>> [DEBUG] Creating service: org.scijava.event.DefaultEventHistory >>>>> [DEBUG] Created service 'org.scijava.event.DefaultEventHistory' in 2 ms >>>>> [DEBUG] Creating service: org.scijava.console.DefaultConsoleService >>>>> [DEBUG] Created service 'org.scijava.console.DefaultConsoleService' in >> 2 ms >>>>> [DEBUG] Creating service: net.imagej.operator.DefaultCalculatorService >>>>> [DEBUG] Created service 'net.imagej.operator.DefaultCalculatorService' >> in 2 ms >>>>> [DEBUG] Creating service: net.imagej.autoscale.DefaultAutoscaleService >>>>> [DEBUG] Created service 'net.imagej.autoscale.DefaultAutoscaleService' >> in 3 ms >>>>> [DEBUG] Creating service: net.imagej.sampler.DefaultSamplerService >>>>> [DEBUG] Created service 'net.imagej.sampler.DefaultSamplerService' in >> 3 ms >>>>> [DEBUG] Creating service: net.imagej.display.DefaultZoomService >>>>> [DEBUG] Created service 'net.imagej.display.DefaultZoomService' in 2 ms >>>>> [DEBUG] Creating service: net.imagej.display.DefaultWindowService >>>>> [DEBUG] Created service 'net.imagej.display.DefaultWindowService' in 2 >> ms >>>>> [DEBUG] Creating service: net.imagej.DefaultImgPlusService >>>>> [DEBUG] Created service 'net.imagej.DefaultImgPlusService' in 1 ms >>>>> [DEBUG] Creating service: net.imagej.ui.DefaultImageJUIService >>>>> [DEBUG] Created service 'net.imagej.ui.DefaultImageJUIService' in 1 ms >>>>> [DEBUG] Creating service: net.imagej.measure.DefaultStatisticsService >>>>> [DEBUG] Created service 'net.imagej.measure.DefaultStatisticsService' >> in 3 ms >>>>> [DEBUG] Creating service: net.imagej.measure.DefaultMeasurementService >>>>> [DEBUG] Created service 'net.imagej.measure.DefaultMeasurementService' >> in 1 ms >>>>> [DEBUG] Creating service: net.imagej.animation.DefaultAnimationService >>>>> [DEBUG] Created service 'net.imagej.animation.DefaultAnimationService' >> in 4 ms >>>>> [DEBUG] Creating service: io.scif.io.DefaultNIOService >>>>> [DEBUG] Created service 'io.scif.io.DefaultNIOService' in 2 ms >>>>> [DEBUG] Creating service: >> io.scif.img.converters.DefaultPlaneConverterService >>>>> [DEBUG] Created service >> 'io.scif.img.converters.DefaultPlaneConverterService' in 6 ms >>>>> [DEBUG] Creating service: io.scif.img.DefaultImgUtilityService >>>>> [DEBUG] Created service 'io.scif.img.DefaultImgUtilityService' in 5 ms >>>>> [DEBUG] Creating service: io.scif.gui.DefaultGUIService >>>>> [DEBUG] Created service 'io.scif.gui.DefaultGUIService' in 3 ms >>>>> [DEBUG] Creating service: io.scif.xml.DefaultXMLService >>>>> [DEBUG] Created service 'io.scif.xml.DefaultXMLService' in 22 ms >>>>> [DEBUG] Creating service: io.scif.refs.DefaultRefManagerService >>>>> [DEBUG] Created service 'io.scif.refs.DefaultRefManagerService' in 1 ms >>>>> [DEBUG] Creating service: io.scif.services.DefaultTranslatorService >>>>> [DEBUG] Created service 'io.scif.services.DefaultTranslatorService' in >> 2 ms >>>>> [DEBUG] Creating service: io.scif.codec.DefaultCodecService >>>>> [DEBUG] Created service 'io.scif.codec.DefaultCodecService' in 1 ms >>>>> [DEBUG] Creating service: io.scif.img.cell.cache.MapDBCache >>>>> [DEBUG] Created service 'io.scif.img.cell.cache.MapDBCache' in 8 ms >>>>> [DEBUG] Creating service: io.scif.DefaultMetadataService >>>>> [DEBUG] Created service 'io.scif.DefaultMetadataService' in 0 ms >>>>> [DEBUG] Creating service: io.scif.services.DefaultFilePatternService >>>>> [DEBUG] Created service 'io.scif.services.DefaultFilePatternService' >> in 2 ms >>>>> [DEBUG] Creating service: io.scif.formats.tiff.DefaultTiffService >>>>> [DEBUG] Created service 'io.scif.formats.tiff.DefaultTiffService' in 3 >> ms >>>>> [DEBUG] Creating service: io.scif.services.DefaultLocationService >>>>> [DEBUG] Created service 'io.scif.services.DefaultLocationService' in 1 >> ms >>>>> [DEBUG] Creating service: io.scif.services.JAIIIOServiceImpl >>>>> [DEBUG] Created service 'io.scif.services.JAIIIOServiceImpl' in 24 ms >>>>> [DEBUG] Creating service: io.scif.formats.qt.DefaultQTJavaService >>>>> [DEBUG] Created service 'io.scif.formats.qt.DefaultQTJavaService' in 5 >> ms >>>>> [DEBUG] Creating service: org.scijava.ui.swing.SwingIconService >>>>> [DEBUG] Created service 'org.scijava.ui.swing.SwingIconService' in 3 ms >>>>> [DEBUG] Creating service: >> org.scijava.plugins.scripting.java.DefaultJavaService >>>>> [DEBUG] Created service >> 'org.scijava.plugins.scripting.java.DefaultJavaService' in 2 ms >>>>> [DEBUG] Creating service: net.imagej.ui.swing.overlay.JHotDrawService >>>>> [DEBUG] Created service 'net.imagej.ui.swing.overlay.JHotDrawService' >> in 3 ms >>>>> [DEBUG] Creating service: net.imagej.updater.DefaultUpdateService >>>>> [DEBUG] Created service 'net.imagej.updater.DefaultUpdateService' in 7 >> ms >>>>> [DEBUG] Creating service: net.imagej.updater.DefaultUploaderService >>>>> [DEBUG] Created service 'net.imagej.updater.DefaultUploaderService' in >> 1 ms >>>>> [DEBUG] Creating service: net.imagej.ops.DefaultOpService >>>>> [DEBUG] Creating service: net.imagej.ops.DefaultOpMatchingService >>>>> [DEBUG] Created service 'net.imagej.ops.DefaultOpMatchingService' in 2 >> ms >>>>> [DEBUG] Created service 'net.imagej.ops.DefaultOpService' in 5 ms >>>>> [DEBUG] Creating service: >> net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor >>>>> [DEBUG] Created service >> 'net.imagej.plugins.commands.restructure.SplitChannelsContextMonitor' in 1 >> ms >>>>> [DEBUG] Creating service: io.scif.ome.services.DefaultOMEXMLService >>>>> [DEBUG] Created service 'io.scif.ome.services.DefaultOMEXMLService' in >> 30 ms >>>>> [DEBUG] Creating service: >> io.scif.ome.services.DefaultOMEMetadataService >>>>> [DEBUG] Created service >> 'io.scif.ome.services.DefaultOMEMetadataService' in 11 ms >>>>> [DEBUG] Creating service: net.imagej.display.DummyScreenCaptureService >>>>> [DEBUG] Created service 'net.imagej.display.DummyScreenCaptureService' >> in 0 ms >>>>> [DEBUG] Creating service: net.imagej.render.DummyRenderingService >>>>> [DEBUG] Created service 'net.imagej.render.DummyRenderingService' in 1 >> ms >>>>> [DEBUG] Creating service: io.scif.services.DefaultInitializeService >>>>> [DEBUG] Created service 'io.scif.services.DefaultInitializeService' in >> 3 ms >>>>> [DEBUG] Received command line arguments: >>>>> [DEBUG] publish( >>>>> context = org.scijava.Context@7c92eb86 >>>>> consumed = false,null,null), called from non-EDT Thread:null >>>>> [DEBUG] -port7 >>>>> [DEBUG] -macro >>>>> [DEBUG] /home/btupper/hello.ijm >>>>> [DEBUG] -batch >>>>> [INFO] Found 11 ConsoleArgument plugins. >>>>> [ERROR] Skipping unsupported option -port7 >>>>> [DEBUG] publish( >>>>> context = org.scijava.Context@7c92eb86 >>>>> consumed = false,null,null), called from non-EDT Thread:null >>>>> [INFO] Discovered user interface: net.imagej.legacy.ui.LegacyUI >>>>> [INFO] Discovered user interface: org.scijava.ui.swing.sdi.SwingSDIUI >>>>> [INFO] Discovered user interface: org.scijava.ui.awt.AWTUI >>>>> [INFO] Discovered user interface: org.scijava.ui.swing.mdi.SwingMdiUI >>>>> [btupper@fcm-flow ~]$ >>>> >>>> -- >>>> ImageJ mailing list: http://imagej.nih.gov/ij/list.html >>> >> >> -- >> ImageJ mailing list: http://imagej.nih.gov/ij/list.html >> > > -- > ImageJ mailing list: http://imagej.nih.gov/ij/list.html -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html |
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