Workshop: Digital Image Analysis with ImageJ (April 3 - 5, 2017)

[Lai Ding]

Dear Everyone,

Harvard NeuroDiscovery Center Enhanced Neuroimaging Core will host an 3-day ImageJ workshop in April 2017. Detailed information is below.
 
Digital Image Analysis with ImageJ
April 3rd – April 5th  2017

This intensive 3-day workshop taught by Dr. Lai Ding, manager of the Harvard NeuroDiscovery Center Enhanced Neuroimaging Core, introduces ImageJ, its basic functions, and its macro programming capabilities. Using real imaging projects performed at the Harvard NeuroDiscovery Center's Enhanced Neuroimaging Core, Dr. Ding will demonstrate common image analysis tasks such as basic image processing, stack alignment, cell counting and measurement. Macro writing will be covered to demonstrate how to automate a series of ImageJ commands, to process massive datasets automatically and to store results as desired.
 
The workshop is broken down into three sessions. Interested participants can sign up for one or more sessions depending on their interest and experience. See tentative schedule below.
If you are interested in this workshop but unable to join this time, please also let us know (email [hidden email]) if you may be able to join the same workshop in the coming months. We MAY host another identical workshop in near future based on the interests shown.
----- ----- ----- ----- ----- ----- ----- ----- ----- ----- ----- ----- -----
Program Schedule:
Session I (April 3rd ) ImageJ for beginners: basic ImageJ functions, measurement, filtering, background subtraction, cell counting, particle analysis, and ethics on image processing.

Session II (April 4th ) Advanced ImageJ: morphology filter, thresholding methods, using ImageJ on FRAP, colocalization analysis and wound assay, working with plugins, designing image analysis protocols.

Session III (April 5th ) ImageJ Macro Programming: introduce ImageJ macro programming language, record image process protocols as macro, batch process multiple images, user interactive features in macro, case study with sample codes. This session is aimed towards the non-programmer, however we do expect the participant to have a basic idea of programming flow control syntax ("for" loop, "if-else" control). The participants are strongly encouraged to go through a brief tutorial on the ImageJ official website before the workshop. http://rsb.info.nih.gov/ij/developer/macro/macros.html

Location:
L2-025
Countway Library Computer Classroom
Harvard Medical School
10 Shattuck St.
Boston, MA 02115
 
To download details and enrollment information, click  
https://gallery.mailchimp.com/d5a56303a2b99ac1b95d84e42/files/3de5585c-c7c4-41bb-a6ab-d826db81ccf0/Announcement_ImageJ_workshop_April_3_5_2017.pdf


To register, please complete the online registration form by clicking
https://docs.google.com/forms/d/e/1FAIpQLScmjCG43RdUUbYnvsTs9a1svxY2xjq5rdTjDNccMjhLVODy4w/viewform

For further information please contact: Lai Ding at [hidden email]  

Best Regards
Lai Ding

--
ImageJ mailing list: http://imagej.nih.gov/ij/list.html

[ctrueden]

Hi Lai Ding,

I added this to the list of workshops on the Upcoming Events page of the
ImageJ web site:
https://imagej.net/Upcoming_Events

Regards,
Curtis

--
Curtis Rueden
LOCI software architect - https://loci.wisc.edu/software
ImageJ2 lead, Fiji maintainer - https://imagej.net/User:Rueden
Did you know ImageJ has a forum? http://forum.imagej.net/


On Thu, Mar 2, 2017 at 10:18 AM, Lai Ding <[hidden email]> wrote:

> Dear Everyone,
>
> Harvard NeuroDiscovery Center Enhanced Neuroimaging Core will host an
> 3-day ImageJ workshop in April 2017. Detailed information is below.
>
> Digital Image Analysis with ImageJ
> April 3rd – April 5th  2017
>
> This intensive 3-day workshop taught by Dr. Lai Ding, manager of the
> Harvard NeuroDiscovery Center Enhanced Neuroimaging Core, introduces
> ImageJ, its basic functions, and its macro programming capabilities. Using
> real imaging projects performed at the Harvard NeuroDiscovery Center's
> Enhanced Neuroimaging Core, Dr. Ding will demonstrate common image analysis
> tasks such as basic image processing, stack alignment, cell counting and
> measurement. Macro writing will be covered to demonstrate how to automate a
> series of ImageJ commands, to process massive datasets automatically and to
> store results as desired.
>
> The workshop is broken down into three sessions. Interested participants
> can sign up for one or more sessions depending on their interest and
> experience. See tentative schedule below.
> If you are interested in this workshop but unable to join this time,
> please also let us know (email [hidden email]) if you may be
> able to join the same workshop in the coming months. We MAY host another
> identical workshop in near future based on the interests shown.
> ----- ----- ----- ----- ----- ----- ----- ----- ----- ----- ----- -----
> -----
> Program Schedule:
> Session I (April 3rd ) ImageJ for beginners: basic ImageJ functions,
> measurement, filtering, background subtraction, cell counting, particle
> analysis, and ethics on image processing.
>
> Session II (April 4th ) Advanced ImageJ: morphology filter, thresholding
> methods, using ImageJ on FRAP, colocalization analysis and wound assay,
> working with plugins, designing image analysis protocols.
>
> Session III (April 5th ) ImageJ Macro Programming: introduce ImageJ macro
> programming language, record image process protocols as macro, batch
> process multiple images, user interactive features in macro, case study
> with sample codes. This session is aimed towards the non-programmer,
> however we do expect the participant to have a basic idea of programming
> flow control syntax ("for" loop, "if-else" control). The participants are
> strongly encouraged to go through a brief tutorial on the ImageJ official
> website before the workshop. http://rsb.info.nih.gov/ij/
> developer/macro/macros.html
>
> Location:
> L2-025
> Countway Library Computer Classroom
> Harvard Medical School
> 10 Shattuck St.
> Boston, MA 02115
>
> To download details and enrollment information, click
> https://gallery.mailchimp.com/d5a56303a2b99ac1b95d84e42/
> files/3de5585c-c7c4-41bb-a6ab-d826db81ccf0/Announcement_
> ImageJ_workshop_April_3_5_2017.pdf
>
>
> To register, please complete the online registration form by clicking
> https://docs.google.com/forms/d/e/1FAIpQLScmjCG43RdUUbYnvsTs9a1s
> vxY2xjq5rdTjDNccMjhLVODy4w/viewform
>
> For further information please contact: Lai Ding at
> [hidden email]
>
> Best Regards
> Lai Ding
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

--
ImageJ mailing list: http://imagej.nih.gov/ij/list.html