bug in 5D? and Imarus file format question

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bug in 5D? and Imarus file format question

Cammer, Michael
I am using LOCI to open old BioRad ZT stacks using the Image5D mode.  LOCI correctly shows Z=7, C=3 and T=40 and all the images open.   If I use Image > Stacks > Set Slice... I can show any slice.  However, the slider for Z does not respond and using "<" and ">" to move through the stack only selects odd numbered slices.

The second issue is, does anybody know how to export these data to be opened in Imarus?

Thank you.

Regards,

Michael

________________________________________________________
Michael Cammer, Assistant Research Scientist
Skirball Institute of Biomolecular Medicine
Lab: (212) 263-3208  Cell: (914) 309-3270

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Re: bug in 5D? and Imarus file format question

ctrueden
Hi Michael,

There was a bug in Image5D with the Z slider that we fixed recently. Are you
using the latest version of Image5D, v1.2.2? You can download it here:

  http://imagejdev.org/plugins/image5d

Let us know if it still doesn't work for you.

-Curtis

On Wed, Feb 23, 2011 at 3:06 PM, Cammer, Michael <[hidden email]
> wrote:

> I am using LOCI to open old BioRad ZT stacks using the Image5D mode.  LOCI
> correctly shows Z=7, C=3 and T=40 and all the images open.   If I use Image
> > Stacks > Set Slice... I can show any slice.  However, the slider for Z
> does not respond and using "<" and ">" to move through the stack only
> selects odd numbered slices.
>
> The second issue is, does anybody know how to export these data to be
> opened in Imarus?
>
> Thank you.
>
> Regards,
>
> Michael
>
> ________________________________________________________
> Michael Cammer, Assistant Research Scientist
> Skirball Institute of Biomolecular Medicine
> Lab: (212) 263-3208  Cell: (914) 309-3270
>
> </PRE>
> <html>
> <body>
> ------------------------------------------------------------<br />
> This email message, including any attachments, is for the sole use of the
> intended recipient(s) and may contain information that is proprietary,
> confidential, and exempt from disclosure under applicable law. Any
> unauthorized review, use, disclosure, or distribution is prohibited. If you
> have received this email in error please notify the sender by return email
> and delete the original message. Please note, the recipient should check
> this email and any attachments for the presence of viruses. The organization
> accepts no liability for any damage caused by any virus transmitted by this
> email.<br />
> =================================
> </body>
> </html>
> <PRE>
>