bug with plugin MRI cell image analyzer

[Pablo Munoz]

Hello
I download a plugin from http://www.mri.cnrs.fr/index.php?m=62&c=65  and I have the next error in FIJI
can someone help me to know how can fix this problem and use the plugin?

Thank you very much for your kind help

best Regards

Pablo M


/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/MRI_Launcher.java:23: package imagejProxies does not exist
import imagejProxies.MRIJava2;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzer.java:30: package imagejProxies does not exist
import imagejProxies.MRIJava2;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzer.java:41: package neuronJNewGUI does not exist
import neuronJNewGUI.NeuronJ;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzer.java:42: package neuronJgui does not exist
import neuronJgui.NJ;
                 ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzer.java:56: package movie does not exist
import movie.MRI_QT_Stack_Writer_fast;
            ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:31: cannot find symbol
symbol  : class Projector
location: package ij.plugin.filter
import ij.plugin.filter.Projector;
                       ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:49: package neuronJNewGUI does not exist
import neuronJNewGUI.SlideShowControl;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:50: package neuronJNewGUI does not exist
import neuronJNewGUI.LookupTableSelector;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:51: package neuronJgui does not exist
import neuronJgui.NJ;
                 ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:53: package broadcaster does not exist
import broadcaster.ObservableContrastAdjuster;
                  ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:82: cannot find symbol
symbol  : class Volume_Viewer
location: package volume
import volume.Volume_Viewer;
             ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:83: package volume.OrtView does not exist
import volume.OrtView.OrtView_;
                     ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/Operation.java:50: package imagejProxies does not exist
import imagejProxies.MRIInterpreter;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/Operation.java:100: cannot find symbol
symbol  : class MRIInterpreter
location: class operations.Operation
        protected MRIInterpreter interpreter;
                  ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/Operation.java:821: cannot find symbol
symbol  : class MRIInterpreter
location: class operations.Operation
        public MRIInterpreter getInterpreter() {
               ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/ListEditor.java:27: package neuronJNewGUI does not exist
import neuronJNewGUI.ConfigurableFileFilter;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/ListEditorView.java:24: package imagejProxies does not exist
import imagejProxies.MRIFolderOpener;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/ListEditor.java:62: cannot find symbol
symbol  : class ConfigurableFileFilter
location: class gui.ListEditor
        public static ConfigurableFileFilter getTiffFileFilter() {
                      ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/ListEditor.java:68: cannot find symbol
symbol  : class ConfigurableFileFilter
location: class gui.ListEditor
        public static ConfigurableFileFilter getImageFileFilter() {
                      ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/ListEditor.java:124: cannot find symbol
symbol  : class ConfigurableFileFilter
location: class gui.ListEditor
        public static ConfigurableFileFilter getExcelFileFilter() {
                      ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/ObjectModelingWorkbench.java:33: package imagejProxies does not exist
import imagejProxies.MRIInterpreter;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/AlignmentSlice.java:32: cannot find symbol
symbol  : class ImageDuplicator
location: package utils
import utils.ImageDuplicator;
            ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/AlignmentSlice.java:33: cannot find symbol
symbol  : class ImageTransformer
location: package utils
import utils.ImageTransformer;
            ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/AlignmentSlice.java:39: package imagejProxies does not exist
import imagejProxies.MRIInterpreter;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/Object3DManager.java:56: cannot find symbol
symbol  : class NumberUtil
location: package utils
import utils.NumberUtil;
            ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/ObjectModelingWorkbenchView.java:29: package imagejProxies does not exist
import imagejProxies.MRIInterpreter;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/ObjectModelingWorkbenchView.java:63: cannot find symbol
symbol  : class FileFromUser
location: package utils
import utils.FileFromUser;
            ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/Object3D.java:56: cannot find symbol
symbol  : class NumberUtil
location: package utils
import utils.NumberUtil;
            ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/Object3DManagerView.java:53: cannot find symbol
symbol  : class FileFromUser
location: package utils
import utils.FileFromUser;
            ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/ImageCanvas.java:28: package imagejProxies does not exist
import imagejProxies.ImageJAccessProxy;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/ImageCanvas.java:29: package imagejProxies does not exist
import imagejProxies.Proxy;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/ImageCanvas.java:47: cannot find symbol
symbol  : class Broadcaster
location: package utils
import utils.Broadcaster;
            ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/ImageCanvas.java:78: cannot find symbol
symbol  : class Broadcaster
location: class objectModelingWorkbench.ImageCanvas
        protected Broadcaster broadcaster;
                  ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/ImageCanvas.java:82: cannot find symbol
symbol  : class ImageJAccessProxy
location: class objectModelingWorkbench.ImageCanvas
        protected ImageJAccessProxy proxy = new ImageJAccessProxy();
                  ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/ImageCanvas.java:403: cannot find symbol
symbol  : class Broadcaster
location: class objectModelingWorkbench.ImageCanvas
        public Broadcaster getBroadcaster() {
               ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/image/ConvertImageTypeOperation.java:24: package imagejProxies does not exist
import imagejProxies.MRIConverter;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/processing/EnhanceContrastOperation.java:24: package imagejProxies does not exist
import imagejProxies.SilentContrastEnhancer;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/processing/EnhanceContrastOperation.java:37: cannot find symbol
symbol  : class SilentContrastEnhancer
location: class operations.processing.EnhanceContrastOperation
        protected SilentContrastEnhancer contrastEnhancer;
                  ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/processing/EnhanceContrastOperation.java:132: cannot find symbol
symbol  : class SilentContrastEnhancer
location: class operations.processing.EnhanceContrastOperation
        public SilentContrastEnhancer getContrastEnhancer() {
               ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:16: package reporting does not exist
import reporting.ExcelIO;
                ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:17: package reporting does not exist
import reporting.ExcelWriter;
                ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportingOperation.java:21: package org.apache.poi.hssf.usermodel does not exist
import org.apache.poi.hssf.usermodel.HSSFWorkbook;
                                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportingOperation.java:24: package reporting does not exist
import reporting.ExcelIO;
                ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportingOperation.java:25: package reporting does not exist
import reporting.ExcelWriter;
                ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:117: cannot find symbol
symbol  : class ExcelIO
location: class operations.reporting.ReportSegmentsOperation
        private void reportImageTreated(ExcelIO excelIO, ExcelWriter excelProxy) {
                                        ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:117: cannot find symbol
symbol  : class ExcelWriter
location: class operations.reporting.ReportSegmentsOperation
        private void reportImageTreated(ExcelIO excelIO, ExcelWriter excelProxy) {
                                                         ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:157: cannot find symbol
symbol  : class ExcelWriter
location: class operations.reporting.ReportSegmentsOperation
        private void createHeadingsFourthSheet(ExcelWriter excelProxy, ExcelIO excelIO) {
                                               ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:157: cannot find symbol
symbol  : class ExcelIO
location: class operations.reporting.ReportSegmentsOperation
        private void createHeadingsFourthSheet(ExcelWriter excelProxy, ExcelIO excelIO) {
                                                                       ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:172: cannot find symbol
symbol  : class ExcelIO
location: class operations.reporting.ReportSegmentsOperation
        private void reportSubsegmentDistances( ExcelIO excelIO, ExcelWriter excelProxy, Vector<Line2D> containedSegments, Line2D base) {
                                                ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:172: cannot find symbol
symbol  : class ExcelWriter
location: class operations.reporting.ReportSegmentsOperation
        private void reportSubsegmentDistances( ExcelIO excelIO, ExcelWriter excelProxy, Vector<Line2D> containedSegments, Line2D base) {
                                                                 ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:227: cannot find symbol
symbol  : class ExcelWriter
location: class operations.reporting.ReportSegmentsOperation
        private void createHeadingsThirdSheet(ExcelWriter excelProxy, ExcelIO excelIO) {
                                              ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:227: cannot find symbol
symbol  : class ExcelIO
location: class operations.reporting.ReportSegmentsOperation
        private void createHeadingsThirdSheet(ExcelWriter excelProxy, ExcelIO excelIO) {
                                                                      ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:241: cannot find symbol
symbol  : class ExcelIO
location: class operations.reporting.ReportSegmentsOperation
        private void reportContainedSegments(ExcelIO excelIO, ExcelWriter excelProxy, Line2D base, Vector<Line2D> containedSegments) {
                                             ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:241: cannot find symbol
symbol  : class ExcelWriter
location: class operations.reporting.ReportSegmentsOperation
        private void reportContainedSegments(ExcelIO excelIO, ExcelWriter excelProxy, Line2D base, Vector<Line2D> containedSegments) {
                                                              ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:333: cannot find symbol
symbol  : class ExcelIO
location: class operations.reporting.ReportSegmentsOperation
        private void reportBaseSegment(ExcelIO excelIO, ExcelWriter excelProxy, Line2D base, int i) {
                                       ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:333: cannot find symbol
symbol  : class ExcelWriter
location: class operations.reporting.ReportSegmentsOperation
        private void reportBaseSegment(ExcelIO excelIO, ExcelWriter excelProxy, Line2D base, int i) {
                                                        ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportingOperation.java:141: cannot find symbol
symbol  : class ExcelIO
location: class operations.reporting.ReportingOperation
        protected void createWorkbook(ExcelIO excelIO, int numberOfSheets) {
                                      ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportingOperation.java:153: cannot find symbol
symbol  : class HSSFWorkbook
location: class operations.reporting.ReportingOperation
        protected void saveWorkbook(HSSFWorkbook wb) {
                                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportingOperation.java:207: cannot find symbol
symbol  : class ExcelIO
location: class operations.reporting.ReportingOperation
        protected ExcelIO loadOrCreateWorkbook(int numberOfSheets) {
                  ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportingOperation.java:231: cannot find symbol
symbol  : class ExcelWriter
location: class operations.reporting.ReportingOperation
        protected void createHeadingsFirstSheet(ExcelWriter excelProxy, ExcelIO excelIO) {
                                                ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportingOperation.java:231: cannot find symbol
symbol  : class ExcelIO
location: class operations.reporting.ReportingOperation
        protected void createHeadingsFirstSheet(ExcelWriter excelProxy, ExcelIO excelIO) {
                                                                        ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportingOperation.java:238: cannot find symbol
symbol  : class ExcelWriter
location: class operations.reporting.ReportingOperation
        protected void createHeadingsSecondSheet(ExcelWriter excelProxy, ExcelIO excelIO) {
                                                 ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportingOperation.java:238: cannot find symbol
symbol  : class ExcelIO
location: class operations.reporting.ReportingOperation
        protected void createHeadingsSecondSheet(ExcelWriter excelProxy, ExcelIO excelIO) {
                                                                         ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportingOperation.java:242: cannot find symbol
symbol  : class ExcelWriter
location: class operations.reporting.ReportingOperation
        protected void createHeadingsSheet(int sheet, ExcelWriter excelProxy, ExcelIO excelIO) {
                                                      ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportingOperation.java:242: cannot find symbol
symbol  : class ExcelIO
location: class operations.reporting.ReportingOperation
        protected void createHeadingsSheet(int sheet, ExcelWriter excelProxy, ExcelIO excelIO) {
                                                                              ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/PixelSpy.java:31: package broadcaster does not exist
import broadcaster.WindowManagerBroadcaster;
                  ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/StackRegistrator.java:37: package rgbRegistration does not exist
import rgbRegistration.Align_RGB_planes;
                      ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/StackRegistrator.java:38: cannot find symbol
symbol  : class Zoom
location: package utils
import utils.Zoom;
            ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/StackRegistratorView.java:41: package rgbRegistration does not exist
import rgbRegistration.Align_RGB_planes;
                      ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/StackRegistrator.java:59: cannot find symbol
symbol  : class Align_RGB_planes
location: class tools.StackRegistrator
        protected Align_RGB_planes aligner;
                  ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/StackRegistrator.java:198: cannot find symbol
symbol  : class Align_RGB_planes
location: class tools.StackRegistrator
        public void setAligner(Align_RGB_planes aligner) {
                               ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/StackRegistrator.java:219: cannot find symbol
symbol  : class Align_RGB_planes
location: class tools.StackRegistrator
        public Align_RGB_planes getAligner() {
               ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/channels/ChannelMixer.java:40: package broadcaster does not exist
import broadcaster.WindowManagerBroadcaster;
                  ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/frap/FRAPWizard.java:37: cannot find symbol
symbol  : class Zoom
location: package utils
import utils.Zoom;
            ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/magicWand/MagicWand.java:11: package imagejProxies does not exist
import imagejProxies.MRIInterpreter;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/magicWand/MagicWand.java:26: cannot find symbol
symbol  : class ImageDuplicator
location: package utils
import utils.ImageDuplicator;
            ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/magicWand/MagicWand.java:28: package broadcaster does not exist
import broadcaster.WindowManagerBroadcaster;
                  ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/magicWand/MagicWand.java:36: cannot find symbol
symbol  : class WindowManagerBroadcaster
location: class tools.magicWand.MagicWand
        protected WindowManagerBroadcaster wmObserver;
                  ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/analysis/MeasureOperation.java:25: package imagejProxies does not exist
import imagejProxies.SilentAnalyzer;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/analysis/FindObjectsOperation.java:33: package imagejProxies does not exist
import imagejProxies.SilentParticleAnalyzer;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/file/OpenSeriesAsStackOperation.java:29: cannot find symbol
symbol  : class DICOM_Sorter
location: package ij.plugin
import ij.plugin.DICOM_Sorter;
                ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/MRI_Launcher.java:23: package imagejProxies does not exist
import imagejProxies.MRIJava2;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzer.java:30: package imagejProxies does not exist
import imagejProxies.MRIJava2;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzer.java:41: package neuronJNewGUI does not exist
import neuronJNewGUI.NeuronJ;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzer.java:42: package neuronJgui does not exist
import neuronJgui.NJ;
                 ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzer.java:56: package movie does not exist
import movie.MRI_QT_Stack_Writer_fast;
            ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:31: cannot find symbol
symbol  : class Projector
location: package ij.plugin.filter
import ij.plugin.filter.Projector;
                       ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:49: package neuronJNewGUI does not exist
import neuronJNewGUI.SlideShowControl;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:50: package neuronJNewGUI does not exist
import neuronJNewGUI.LookupTableSelector;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:51: package neuronJgui does not exist
import neuronJgui.NJ;
                 ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:53: package broadcaster does not exist
import broadcaster.ObservableContrastAdjuster;
                  ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:82: cannot find symbol
symbol  : class Volume_Viewer
location: package volume
import volume.Volume_Viewer;
             ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:83: package volume.OrtView does not exist
import volume.OrtView.OrtView_;
                     ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/Operation.java:50: package imagejProxies does not exist
import imagejProxies.MRIInterpreter;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/Operation.java:100: cannot find symbol
symbol  : class MRIInterpreter
location: class operations.Operation
        protected MRIInterpreter interpreter;
                  ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/Operation.java:821: cannot find symbol
symbol  : class MRIInterpreter
location: class operations.Operation
        public MRIInterpreter getInterpreter() {
               ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/ListEditor.java:27: package neuronJNewGUI does not exist
import neuronJNewGUI.ConfigurableFileFilter;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/ListEditorView.java:24: package imagejProxies does not exist
import imagejProxies.MRIFolderOpener;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/ListEditor.java:62: cannot find symbol
symbol  : class ConfigurableFileFilter
location: class gui.ListEditor
        public static ConfigurableFileFilter getTiffFileFilter() {
                      ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/ListEditor.java:68: cannot find symbol
symbol  : class ConfigurableFileFilter
location: class gui.ListEditor
        public static ConfigurableFileFilter getImageFileFilter() {
                      ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/ListEditor.java:124: cannot find symbol
symbol  : class ConfigurableFileFilter
location: class gui.ListEditor
        public static ConfigurableFileFilter getExcelFileFilter() {
                      ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/ObjectModelingWorkbench.java:33: package imagejProxies does not exist
import imagejProxies.MRIInterpreter;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/AlignmentSlice.java:32: cannot find symbol
symbol  : class ImageDuplicator
location: package utils
import utils.ImageDuplicator;
            ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/AlignmentSlice.java:33: cannot find symbol
symbol  : class ImageTransformer
location: package utils
import utils.ImageTransformer;
            ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/AlignmentSlice.java:39: package imagejProxies does not exist
import imagejProxies.MRIInterpreter;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/Object3DManager.java:56: cannot find symbol
symbol  : class NumberUtil
location: package utils
import utils.NumberUtil;
            ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/ObjectModelingWorkbenchView.java:29: package imagejProxies does not exist
import imagejProxies.MRIInterpreter;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/ObjectModelingWorkbenchView.java:63: cannot find symbol
symbol  : class FileFromUser
location: package utils
import utils.FileFromUser;
            ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/Object3D.java:56: cannot find symbol
symbol  : class NumberUtil
location: package utils
import utils.NumberUtil;
            ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/Object3DManagerView.java:53: cannot find symbol
symbol  : class FileFromUser
location: package utils
import utils.FileFromUser;
            ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/ImageCanvas.java:28: package imagejProxies does not exist
import imagejProxies.ImageJAccessProxy;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/ImageCanvas.java:29: package imagejProxies does not exist
import imagejProxies.Proxy;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/ImageCanvas.java:47: cannot find symbol
symbol  : class Broadcaster
location: package utils
import utils.Broadcaster;
            ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/ImageCanvas.java:78: cannot find symbol
symbol  : class Broadcaster
location: class objectModelingWorkbench.ImageCanvas
        protected Broadcaster broadcaster;
                  ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/ImageCanvas.java:82: cannot find symbol
symbol  : class ImageJAccessProxy
location: class objectModelingWorkbench.ImageCanvas
        protected ImageJAccessProxy proxy = new ImageJAccessProxy();
                  ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/objectModelingWorkbench/ImageCanvas.java:403: cannot find symbol
symbol  : class Broadcaster
location: class objectModelingWorkbench.ImageCanvas
        public Broadcaster getBroadcaster() {
               ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/image/ConvertImageTypeOperation.java:24: package imagejProxies does not exist
import imagejProxies.MRIConverter;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/processing/EnhanceContrastOperation.java:24: package imagejProxies does not exist
import imagejProxies.SilentContrastEnhancer;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/processing/EnhanceContrastOperation.java:37: cannot find symbol
symbol  : class SilentContrastEnhancer
location: class operations.processing.EnhanceContrastOperation
        protected SilentContrastEnhancer contrastEnhancer;
                  ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/processing/EnhanceContrastOperation.java:132: cannot find symbol
symbol  : class SilentContrastEnhancer
location: class operations.processing.EnhanceContrastOperation
        public SilentContrastEnhancer getContrastEnhancer() {
               ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:16: package reporting does not exist
import reporting.ExcelIO;
                ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:17: package reporting does not exist
import reporting.ExcelWriter;
                ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportingOperation.java:21: package org.apache.poi.hssf.usermodel does not exist
import org.apache.poi.hssf.usermodel.HSSFWorkbook;
                                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportingOperation.java:24: package reporting does not exist
import reporting.ExcelIO;
                ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportingOperation.java:25: package reporting does not exist
import reporting.ExcelWriter;
                ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:117: cannot find symbol
symbol  : class ExcelIO
location: class operations.reporting.ReportSegmentsOperation
        private void reportImageTreated(ExcelIO excelIO, ExcelWriter excelProxy) {
                                        ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:117: cannot find symbol
symbol  : class ExcelWriter
location: class operations.reporting.ReportSegmentsOperation
        private void reportImageTreated(ExcelIO excelIO, ExcelWriter excelProxy) {
                                                         ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:157: cannot find symbol
symbol  : class ExcelWriter
location: class operations.reporting.ReportSegmentsOperation
        private void createHeadingsFourthSheet(ExcelWriter excelProxy, ExcelIO excelIO) {
                                               ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:157: cannot find symbol
symbol  : class ExcelIO
location: class operations.reporting.ReportSegmentsOperation
        private void createHeadingsFourthSheet(ExcelWriter excelProxy, ExcelIO excelIO) {
                                                                       ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:172: cannot find symbol
symbol  : class ExcelIO
location: class operations.reporting.ReportSegmentsOperation
        private void reportSubsegmentDistances( ExcelIO excelIO, ExcelWriter excelProxy, Vector<Line2D> containedSegments, Line2D base) {
                                                ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:172: cannot find symbol
symbol  : class ExcelWriter
location: class operations.reporting.ReportSegmentsOperation
        private void reportSubsegmentDistances( ExcelIO excelIO, ExcelWriter excelProxy, Vector<Line2D> containedSegments, Line2D base) {
                                                                 ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:227: cannot find symbol
symbol  : class ExcelWriter
location: class operations.reporting.ReportSegmentsOperation
        private void createHeadingsThirdSheet(ExcelWriter excelProxy, ExcelIO excelIO) {
                                              ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:227: cannot find symbol
symbol  : class ExcelIO
location: class operations.reporting.ReportSegmentsOperation
        private void createHeadingsThirdSheet(ExcelWriter excelProxy, ExcelIO excelIO) {
                                                                      ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:241: cannot find symbol
symbol  : class ExcelIO
location: class operations.reporting.ReportSegmentsOperation
        private void reportContainedSegments(ExcelIO excelIO, ExcelWriter excelProxy, Line2D base, Vector<Line2D> containedSegments) {
                                             ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:241: cannot find symbol
symbol  : class ExcelWriter
location: class operations.reporting.ReportSegmentsOperation
        private void reportContainedSegments(ExcelIO excelIO, ExcelWriter excelProxy, Line2D base, Vector<Line2D> containedSegments) {
                                                              ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:333: cannot find symbol
symbol  : class ExcelIO
location: class operations.reporting.ReportSegmentsOperation
        private void reportBaseSegment(ExcelIO excelIO, ExcelWriter excelProxy, Line2D base, int i) {
                                       ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportSegmentsOperation.java:333: cannot find symbol
symbol  : class ExcelWriter
location: class operations.reporting.ReportSegmentsOperation
        private void reportBaseSegment(ExcelIO excelIO, ExcelWriter excelProxy, Line2D base, int i) {
                                                        ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportingOperation.java:141: cannot find symbol
symbol  : class ExcelIO
location: class operations.reporting.ReportingOperation
        protected void createWorkbook(ExcelIO excelIO, int numberOfSheets) {
                                      ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportingOperation.java:153: cannot find symbol
symbol  : class HSSFWorkbook
location: class operations.reporting.ReportingOperation
        protected void saveWorkbook(HSSFWorkbook wb) {
                                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportingOperation.java:207: cannot find symbol
symbol  : class ExcelIO
location: class operations.reporting.ReportingOperation
        protected ExcelIO loadOrCreateWorkbook(int numberOfSheets) {
                  ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportingOperation.java:231: cannot find symbol
symbol  : class ExcelWriter
location: class operations.reporting.ReportingOperation
        protected void createHeadingsFirstSheet(ExcelWriter excelProxy, ExcelIO excelIO) {
                                                ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportingOperation.java:231: cannot find symbol
symbol  : class ExcelIO
location: class operations.reporting.ReportingOperation
        protected void createHeadingsFirstSheet(ExcelWriter excelProxy, ExcelIO excelIO) {
                                                                        ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportingOperation.java:238: cannot find symbol
symbol  : class ExcelWriter
location: class operations.reporting.ReportingOperation
        protected void createHeadingsSecondSheet(ExcelWriter excelProxy, ExcelIO excelIO) {
                                                 ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportingOperation.java:238: cannot find symbol
symbol  : class ExcelIO
location: class operations.reporting.ReportingOperation
        protected void createHeadingsSecondSheet(ExcelWriter excelProxy, ExcelIO excelIO) {
                                                                         ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportingOperation.java:242: cannot find symbol
symbol  : class ExcelWriter
location: class operations.reporting.ReportingOperation
        protected void createHeadingsSheet(int sheet, ExcelWriter excelProxy, ExcelIO excelIO) {
                                                      ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/reporting/ReportingOperation.java:242: cannot find symbol
symbol  : class ExcelIO
location: class operations.reporting.ReportingOperation
        protected void createHeadingsSheet(int sheet, ExcelWriter excelProxy, ExcelIO excelIO) {
                                                                              ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/PixelSpy.java:31: package broadcaster does not exist
import broadcaster.WindowManagerBroadcaster;
                  ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/StackRegistrator.java:37: package rgbRegistration does not exist
import rgbRegistration.Align_RGB_planes;
                      ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/StackRegistrator.java:38: cannot find symbol
symbol  : class Zoom
location: package utils
import utils.Zoom;
            ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/StackRegistratorView.java:41: package rgbRegistration does not exist
import rgbRegistration.Align_RGB_planes;
                      ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/StackRegistrator.java:59: cannot find symbol
symbol  : class Align_RGB_planes
location: class tools.StackRegistrator
        protected Align_RGB_planes aligner;
                  ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/StackRegistrator.java:198: cannot find symbol
symbol  : class Align_RGB_planes
location: class tools.StackRegistrator
        public void setAligner(Align_RGB_planes aligner) {
                               ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/StackRegistrator.java:219: cannot find symbol
symbol  : class Align_RGB_planes
location: class tools.StackRegistrator
        public Align_RGB_planes getAligner() {
               ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/channels/ChannelMixer.java:40: package broadcaster does not exist
import broadcaster.WindowManagerBroadcaster;
                  ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/frap/FRAPWizard.java:37: cannot find symbol
symbol  : class Zoom
location: package utils
import utils.Zoom;
            ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/magicWand/MagicWand.java:11: package imagejProxies does not exist
import imagejProxies.MRIInterpreter;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/magicWand/MagicWand.java:26: cannot find symbol
symbol  : class ImageDuplicator
location: package utils
import utils.ImageDuplicator;
            ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/magicWand/MagicWand.java:28: package broadcaster does not exist
import broadcaster.WindowManagerBroadcaster;
                  ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/tools/magicWand/MagicWand.java:36: cannot find symbol
symbol  : class WindowManagerBroadcaster
location: class tools.magicWand.MagicWand
        protected WindowManagerBroadcaster wmObserver;
                  ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/analysis/MeasureOperation.java:25: package imagejProxies does not exist
import imagejProxies.SilentAnalyzer;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/analysis/FindObjectsOperation.java:33: package imagejProxies does not exist
import imagejProxies.SilentParticleAnalyzer;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/operations/file/OpenSeriesAsStackOperation.java:29: cannot find symbol
symbol  : class DICOM_Sorter
location: package ij.plugin
import ij.plugin.DICOM_Sorter;
                ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/MRI_Launcher.java:35: cannot find symbol
symbol  : variable MRIJava2
location: class MRI_Launcher
                MRIJava2.setLookAndFeelSet(true);
                ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzer.java:99: cannot find symbol
symbol  : variable MRIJava2
location: class gui.CellImageAnalyzer
                MRIJava2.setLookAndFeelSet(true);
                ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzer.java:323: cannot find symbol
symbol  : variable NJ
location: class gui.CellImageAnalyzer
                if (NJ.ntb!=null) return;
                    ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzer.java:333: cannot find symbol
symbol  : variable NeuronJ
location: class gui.CellImageAnalyzer
                NeuronJ.createAndShow();
                ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzer.java:362: cannot find symbol
symbol  : class MRI_QT_Stack_Writer_fast
location: class gui.CellImageAnalyzer
                MRI_QT_Stack_Writer_fast writer = new MRI_QT_Stack_Writer_fast();
                ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzer.java:362: cannot find symbol
symbol  : class MRI_QT_Stack_Writer_fast
location: class gui.CellImageAnalyzer
                MRI_QT_Stack_Writer_fast writer = new MRI_QT_Stack_Writer_fast();
                                                      ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:747: cannot find symbol
symbol: class SlideShowControl
                                        SlideShowControl slideShowControl = new SlideShowControl();
                                        ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:747: cannot find symbol
symbol: class SlideShowControl
                                        SlideShowControl slideShowControl = new SlideShowControl();
                                                                                ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:789: cannot find symbol
symbol: class SlideShowControl
                                        SlideShowControl slideShowControl = new SlideShowControl();
                                        ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:789: cannot find symbol
symbol: class SlideShowControl
                                        SlideShowControl slideShowControl = new SlideShowControl();
                                                                                ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:896: cannot find symbol
symbol: class ObservableContrastAdjuster
                                        ObservableContrastAdjuster adjuster = new ObservableContrastAdjuster();
                                        ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:896: cannot find symbol
symbol: class ObservableContrastAdjuster
                                        ObservableContrastAdjuster adjuster = new ObservableContrastAdjuster();
                                                                                  ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:897: cannot find symbol
symbol: variable NJ
                                        if (NJ.ntb!=null) {
                                            ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:898: cannot find symbol
symbol: variable NJ
                                                adjuster.getBroadcaster().addObserver(NJ.ntb);
                                                                                      ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:934: cannot find symbol
symbol: class ObservableContrastAdjuster
                                        ObservableContrastAdjuster adjuster = new ObservableContrastAdjuster();
                                        ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:934: cannot find symbol
symbol: class ObservableContrastAdjuster
                                        ObservableContrastAdjuster adjuster = new ObservableContrastAdjuster();
                                                                                  ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:935: cannot find symbol
symbol: variable NJ
                                        if (NJ.ntb!=null) {
                                            ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:936: cannot find symbol
symbol: variable NJ
                                                adjuster.getBroadcaster().addObserver(NJ.ntb);
                                                                                      ^
/Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/gui/CellImageAnalyzerView.java:955: cannot find symbol
symbol: class ObservableContrastAdjuster
                                        ObservableContrastAdjuster adjuster = new ObservableContrastAdjuster();
                                        ^
warning: Implicitly compiled files were not subject to annotation processing.
Use -proc:none to disable annotation processing or -implicit to specify a policy for implicit compilation.
100 errors
1 warning


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[dscho]

Hi Pablo,

On Sat, 2 Mar 2013, Pablo Munoz wrote:

> I download a plugin from http://www.mri.cnrs.fr/index.php?m=62&c=65  and I have the next error in FIJI
>
> [...]
>
> /Applications/FIJI/Fiji.app/plugins/mri-cia-source/MRI Cell Image Analyzer/src/MRI_Launcher.java:23: package imagejProxies does not exist
> import imagejProxies.MRIJava2;
>                     ^

It appears to me that you downloaded and unpacked mri-cia-source.zip, not
mri-cia.zip as instructed.

As you found out the hard way, mri-cia-source.zip is not intended for
unpacking into plugins/.

Ciao,
Johannes

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