getDirectory() inconsistency for SCIFIO

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getDirectory() inconsistency for SCIFIO

Heeschen, Bill (WA)
Greetings IJ2 crew (first - thanks for obviously tremendous effort)

I didn't see anything about this in the archives, so...

Mismatched macro behavior ImageJ 1.49b and current FIJI/SCIFIO (ImageJ 2.0.0-rc-4 / 1.49b)  (Win7-32-bit)

Output from...                 IJ.log(getDirectory("image"));

ImageJ 1.49b:               C:\Users\u077599\Desktop\Local_Projects\HarringtonCatalyst\
FIJI using SCIFIO:          C:\Users\u077599\Desktop\Local_Projects\HarringtonCatalyst
FIJI using IJ1:                 C:\Users\u077599\Desktop\Local_Projects\HarringtonCatalyst\

Request...  Please adjust SCIFIO interface to include the file separator at end of directory name!

Thanks,
Bill
William A. Heeschen
Analytical Sciences - Microscopy, Digital Imaging
1897 Bldg, E-84
Midland, MI  48667
mailto:[hidden email]



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Re: getDirectory() inconsistency for SCIFIO

dscho
Hi Bill,

On Thu, 12 Jun 2014, Heeschen, Bill (WA) wrote:

> Greetings IJ2 crew (first - thanks for obviously tremendous effort)

Thank you! These are crazy times indeed, but things are moving forward,
with the tremendous help by the community!

> I didn't see anything about this in the archives, so...
>
> Mismatched macro behavior ImageJ 1.49b and current FIJI/SCIFIO (ImageJ 2.0.0-rc-4 / 1.49b)  (Win7-32-bit)
>
> Output from...                 IJ.log(getDirectory("image"));
>
> ImageJ 1.49b:               C:\Users\u077599\Desktop\Local_Projects\HarringtonCatalyst\
> FIJI using SCIFIO:          C:\Users\u077599\Desktop\Local_Projects\HarringtonCatalyst
> FIJI using IJ1:                 C:\Users\u077599\Desktop\Local_Projects\HarringtonCatalyst\
>
> Request...  Please adjust SCIFIO interface to include the file separator
> at end of directory name!

Whoops, my bad. I just fixed this, and it will be included in the next
update (hopefully within a couple hours).

If you cannot wait, please replace your
Fiji.app/jars/imagej-legacy-0.5.11.jar with the version from
http://jenkins.imagej.net/job/ImageJ-legacy/lastSuccessfulBuild/artifact/target/imagej-legacy-0.5.12-SNAPSHOT.jar

(Note that the file will be marked "locally-modified" in the updater and
*not* automatically updated when you do that...).

Thank you for your report!
Johannes

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Re: getDirectory() inconsistency for SCIFIO

dscho
Hi,

as part of the most recent imagej-legacy.jar update (version 0.5.12), the
bug fix made it onto the update site. Could you please verify it?

Thank you,
Johannes

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Re: getDirectory() inconsistency for SCIFIO

dscho
Hi Bill,

On Fri, 13 Jun 2014, Heeschen, Bill (WA) wrote:

> Yes, the file separator is now included when I execute
>
>    IJ.log(getDirectory("image"));
>
> in both SCIFIO and legacy ImageJ mode.  Thanks for the quick response.

Thanks for testing!

> Interestingly, I opened FIJI, told it to go ahead and update and I got
> the attached error window regarding "multiple obsolete versions of
> jars/imagej-legacy-0.5.10.jar"
>
> I clicked "Delete!" and continued on and everthing seems to work fine.
> I quit/restarted FIJI and forced it to update and it reported that I was
> up-to-date.

Great!

> All looks well now!

Cool, thanks for reporting success back to us!
Johannes

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