mdh/raw reader

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mdh/raw reader

Tony Shepherd
Hi,
Does anyone have a plugin for reading raw 3D images? They come with '.raw'
file extension and a header file with '.mhd' file extension.
If not does anyone have a converter to convert these into analyze (.img and
.hdr) ?

Thanks in advance,

Tony
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Antwort: mdh/raw reader

Joachim Wesner
ImageJ Interest Group <[hidden email]> schrieb am 04.04.2008 15:22:19:

> Hi,
> Does anyone have a plugin for reading raw 3D images? They come with
'.raw'
> file extension and a header file with '.mhd' file extension.
> If not does anyone have a converter to convert these into analyze (.img
and
> .hdr) ?
>
> Thanks in advance,
>
> Tony

Hi,

it seems this is MetaImage (ITK) format?

http://ij-plugins.sourceforge.net/3d-toolkit/#ref_3d-io

can probably can read it!?

JW


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Re: Antwort: mdh/raw reader

Tony Shepherd
Thanks joachim, the reader in "3D IO" works, though it needed some fiddling: If anyone else needs to know though, the reader is a bit dated.
Newer images have headers that include the line 'Position = # # #' but the reader at the link below doesn't recognise this tag name 'position'. If you delete that line from the header file of an image it's fine. Also, the reader is case sensitive, which causes problems when the header refers to the corresponding raw file. For example, if the 3D image is held in 'myImage.raw', the header can't say 'ElementDataFile = myImage.RAW'

----------------------------------------

> Date: Fri, 4 Apr 2008 15:27:51 +0200
> From: [hidden email]
> Subject: Antwort: mdh/raw reader
> To: [hidden email]
>
> ImageJ Interest Group  schrieb am 04.04.2008 15:22:19:
>
>> Hi,
>> Does anyone have a plugin for reading raw 3D images? They come with
> '.raw'
>> file extension and a header file with '.mhd' file extension.
>> If not does anyone have a converter to convert these into analyze (.img
> and
>> .hdr) ?
>>
>> Thanks in advance,
>>
>> Tony
>
> Hi,
>
> it seems this is MetaImage (ITK) format?
>
> http://ij-plugins.sourceforge.net/3d-toolkit/#ref_3d-io
>
> can probably can read it!?
>
> JW
>
>
> ______________________________________________________________________
> This email has been scanned by the MessageLabs Email Security System.
> For more information please visit http://www.messagelabs.com/email 
> ______________________________________________________________________

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