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I've got series of density calibrated images, once upon a time saved
in NIH-Image. ImageJ gives me a null pointer exception*) when I open
these files. When opened the files under classic in NIH-Image, all
goes well. Removing the calibration in NIH-Image and then saving the
file allows opening in ImageJ. Obviously, the image is no longer
calibrated.
Is there a way to open calibrated NIH-Image images into ImageJ
without losing the calibration? The docs on imagej.sourceforge.net
suggest that it should be possible since v1.21: "Density calibration
information in NIH Image TIFF files is now decoded. (a)".
The only thing I recently changed in my system (MacOS X) is the
installation of "Java for Mac OS X 10.4, Release 5" (5.0)
Ard
*) java.lang.NullPointerException
at ij.io.FileOpener.setCalibration(FileOpener.java:277)
at ij.io.FileOpener.open(FileOpener.java:106)
at ij.io.Opener.openTiff2(Opener.java:504)
at ij.io.Opener.openTiff(Opener.java:451)
at ij.io.Opener.openImage(Opener.java:160)
at ij.io.Opener.openImage(Opener.java:212)
at ij.io.Opener.open(Opener.java:96)
at ij.io.Opener.open(Opener.java:50)
at ij.Executer.runCommand(Executer.java:113)
at ij.Executer.run(Executer.java:63)
at java.lang.Thread.run(Thread.java:613)
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