problem with Analyse Particles and the Count Maks

[Jeremy Adler]

When I use Analyse Particles and produce a Count Mask,

the masks normally have an integer range of values from 1 upwards.


But at the moment when I run Analyse Particles a second time the intensities of the Count Masks only start at 1 the first instance, but  subsequent with Analyse Particles increment from the last highest Count Mask values.

e.g.

run 1    range 1-141

run 2    range 142-282

run 3    range 283-426

the background value is always zero.


using  1.53c in Fiji


run("Analyze Particles...", "size=800-Infinity pixel show=[Count Masks] include add");


clearing the ROI Manager- makes no difference.


Have I missed something, or is there a real problem here?


Jeremy Adler

Uppsala U

Sweden
















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[Gabriel Landini]

Hi Jeremy,

Do you overwrite the table? If not you keep adding to it.


Cheers
Gabriel


On Tuesday, 15 September 2020 10:10:55 BST you wrote:

> When I use Analyse Particles and produce a Count Mask,
>
> the masks normally have an integer range of values from 1 upwards.
>
>
> But at the moment when I run Analyse Particles a second time the intensities
> of the Count Masks only start at 1 the first instance, but  subsequent with
> Analyse Particles increment from the last highest Count Mask values.
>
> e.g.
>
> run 1    range 1-141
>
> run 2    range 142-282
>
> run 3    range 283-426
>
> the background value is always zero.
>
>
> using  1.53c in Fiji
>
>
> run("Analyze Particles...", "size=800-Infinity pixel show=[Count Masks]
> include add");
>
>
> clearing the ROI Manager- makes no difference.
>
>
> Have I missed something, or is there a real problem here?
>
>
> Jeremy Adler
>
> Uppsala U
>
> Sweden
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
> När du har kontakt med oss på Uppsala universitet med e-post så innebär det
> att vi behandlar dina personuppgifter. För att läsa mer om hur vi gör det
> kan du läsa här: http://www.uu.se/om-uu/dataskydd-personuppgifter/
>
> E-mailing Uppsala University means that we will process your personal data.
> For more information on how this is performed, please read here:
> http://www.uu.se/en/about-uu/data-protection-policy
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html

--
ImageJ mailing list: http://imagej.nih.gov/ij/list.html