Dear all,
I need to measure particles with area bigger than 250 px2 and smaller than I want to avoid particles bigger than 30 000 000 000 px2. So I analyze particles in the image: run("Analyze Particles...", "size=250.00-30000000000.00 pixel show=Outlines display clear summarize add"); But in the Results window list I obtain one particle (#3) bigger than the set size(44493121880.74 px2), Also, when I select the “big” particle in the ROI and I press “measure”, I even get a different (but still bigger than desired) area: 53494241962.58 px2 What am I doing wrong? Thanks, Rodrigo image: sample_th.tif ________________________ Rodrigo J. Gonçalves | | | | | | | | | | | sample_th.tifShared with Dropbox | | | | View on www.dropbox.com | Preview by Yahoo | | | | | -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html |
Hi Rodrigo,
the maximum image size in ImageJ is 2^31-1 pixels = 2147483647 pixels (at least for ImageJ1) So you can't have 30000000000.00 pixels. If the area is in calibrated units (e.g. 30000000000 square micrometers, which is roughly 17 cm * 17 cm), the 'pixel' checkbox should be off, and the word 'pixel' should be removed from the macro command. Calibration of such an image in millimeters might be more handy. Michael ________________________________________________________________ On Mar 19, 2015, at 16:13, Rodrigo Gonçalves wrote: > Dear all, > > I need to measure particles with area bigger than 250 px2 and smaller than I want to avoid particles bigger than 30 000 000 000 px2. > > So I analyze particles in the image: > run("Analyze Particles...", "size=250.00-30000000000.00 pixel show=Outlines display clear summarize add"); > > But in the Results window list I obtain one particle (#3) bigger than the set size(44493121880.74 px2), Also, when I select the “big” particle in the ROI and I press “measure”, I even get a different (but still bigger than desired) area: 53494241962.58 px2 > > > > What am I doing wrong? > > Thanks, Rodrigo > image: > sample_th.tif > > ________________________ > Rodrigo J. Gonçalves > | | > | | | | | | | | > | sample_th.tifShared with Dropbox | > | | > | View on www.dropbox.com | Preview by Yahoo | > | | > | | > > > > -- > ImageJ mailing list: http://imagej.nih.gov/ij/list.html -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html |
Thanks a lot Michael!!
Rodrigo ________________________ From: Michael Schmid <[hidden email]> To: [hidden email] Sent: Thursday, 19 March 2015, 15:10 Subject: Re: size range in analyze particles? Hi Rodrigo, the maximum image size in ImageJ is 2^31-1 pixels = 2147483647 pixels (at least for ImageJ1) So you can't have 30000000000.00 pixels. If the area is in calibrated units (e.g. 30000000000 square micrometers, which is roughly 17 cm * 17 cm), the 'pixel' checkbox should be off, and the word 'pixel' should be removed from the macro command. Calibration of such an image in millimeters might be more handy. Michael ________________________________________________________________ On Mar 19, 2015, at 16:13, Rodrigo Gonçalves wrote: > Dear all, > > I need to measure particles with area bigger than 250 px2 and smaller than I want to avoid particles bigger than 30 000 000 000 px2. > > So I analyze particles in the image: > run("Analyze Particles...", "size=250.00-30000000000.00 pixel show=Outlines display clear summarize add"); > > But in the Results window list I obtain one particle (#3) bigger than the set size(44493121880.74 px2), Also, when I select the “big” particle in the ROI and I press “measure”, I even get a different (but still bigger than desired) area: 53494241962.58 px2 > > > > What am I doing wrong? > > Thanks, Rodrigo > image: > sample_th.tif > > ________________________ > Rodrigo J. Gonçalves > | | > | | | | | | | | > | sample_th.tifShared with Dropbox | > | | > | View on www.dropbox.com | Preview by Yahoo | > | | > | | > > > > -- > ImageJ mailing list: http://imagej.nih.gov/ij/list.html -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html -- ImageJ mailing list: http://imagej.nih.gov/ij/list.html |
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