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Re: How to label all objects in a binary image?

Posted by karo03 on Nov 20, 2011; 12:17pm
URL: http://imagej.273.s1.nabble.com/How-to-label-all-objects-in-a-binary-image-tp3682523p3682524.html

Hi

to stay with your habits, have a look into the morphology plugins of Gabriel Landini. There is a binary label and binarylabel8

Regards
Karsten

Am 20.11.2011 um 11:04 schrieb daniel white:

> Hi Mohanned
>
> try the
> Analyze Particles
> tool, built into imageJ/Fiji
>
> but first go to
> Set Measurements
> and tun on the stuff you want to measure
>
> lastly, dont forget to read the imageJ user guide
> http://rsbweb.nih.gov/ij/docs/guide/index.html
> (its very good!)
> before asking trivial questions!
> many answers are right there!
>
> cheers
>
>
> D
>
> On Nov 20, 2011, at 6:00 AM, IMAGEJ automatic digest system wrote:
>
>> Date:    Sat, 19 Nov 2011 12:07:20 +0200
>> From:    Mohammed Tlais <[hidden email]>
>> Subject: How to label all objects in a binary image?
>>
>> Dear All,
>>
>> I have a binary images of cells, and I want to detect these cells to do my
>> measurements (area, perimeter, etc...). Is there any tool for that?
>>
>> I used to work on a software that has a simple label function to process
>> the binary image and copy the label into a labelled image.
>>
>> Best Regards,
>> Moe Tleis
>
> Dr. Daniel James White BSc. (Hons.) PhD
>
> Leader - Image Processing Facility,
> Senior Microscopist,
> Light Microscopy Facility.
>
> Max Planck Institute of Molecular Cell Biology and Genetics
> Pfotenhauerstrasse 108
> 01307 DRESDEN
> Germany
>
> +49 (0)15114966933 (German Mobile)
> +49 (0)351 210 2627 (Work phone at MPI-CBG)
> +49 (0)351 210 1078 (Fax MPI-CBG LMF)
> chalkie666 Skype
> http://www.bioimagexd.net  BioImageXD
> http://fiji.sc                                        Fiji -  is just ImageJ (Batteries Included)
> http://www.chalkie.org.uk                Dan's Homepages
> https://ifn.mpi-cbg.de  Biopolis Dresden Imaging Platform (BioDIP)
> dan (at) chalkie.org.uk
> ( white (at) mpi-cbg.de )

Karsten
[hidden email]