Re: How to measure voxels from 3D images

Posted by Cobus on Jul 25, 2011; 11:18am
URL: http://imagej.273.s1.nabble.com/How-to-measure-voxels-from-3D-images-tp3683734p3683735.html

Thank you for your comments. My question arose from the loss of intensity when calculating area using pixels of a given ROI. This is the traditional way of processing the data I am currently generating. I have seen that in some cases the area and intensity of my ROI's do not necessarily correlate. To address this issue I need to consider intensity. Do you know if there is a way to get the sum of the voxels of a ROI instead of the mean? If this is possible can you get the colour (code) and the amount of pixels for each individual colour?