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Re: analyzing a line, please

Posted by Jimena Berni on Jul 10, 2011; 8:32am
URL: http://imagej.273.s1.nabble.com/analyzing-a-line-please-tp3683973p3683976.html

Thank you all for your answers and suggestions!

I'll try a fractal analysis.

Jimena

------------
Dr. Jimena Berni
Henslow Research Fellow
Downing College
Department of Zoology
University of Cambridge
Downing Street
CB2 3EJ
Cambridge, UK

Tel.: (++44) 1223 336635
Fax.: (++44) 1223 336676
[hidden email]








On 9 Jul 2011, at 13:01, iqm mug wrote:

> I would suggest a fractal analysis. The fractal dimension of the  
> treated
> images may have higher values.
>
> Best wishes,
> Helmut
>
> 2011/7/8 Johannes Schindelin <[hidden email]>
>
>> Hi Jimena,
>>
>> On Fri, 8 Jul 2011, Jimena Berni wrote:
>>
>>> I am trying to analyze the track of two different animals (image
>>> attached). One of them, the treatment is going kind of in circles  
>>> while
>>> the other perform straight lines and then turns.
>>>
>>> I thought i could draw a segmented line over the track and get the  
>>> value
>>> of angle between two adjacent points. I don't find a way of doing  
>>> this.
>>> I thought that another alternative would be to get the XY  
>>> information of
>>> the line. Is there a way of doing that?
>>
>> Of course that is one way to do it, although the analysis would
>> definitely require programming a macro.
>>
>> But if all you seek is to have a robust discrimination between  
>> treated vs
>> untreated animals, I think it might be better to measure enclosed  
>> area vs
>> average intensity. At least to me it looks like the "cuddled" paths  
>> cover
>> a smaller area, so the average brightness in that area is much  
>> higher than
>> in the other case.
>>
>> Ciao,
>> Johannes
>>